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Conserved domains on  [gi|937911279|dbj|BAS86199|]
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Os03g0729100 [Oryza sativa Japonica Group]

Protein Classification

DUF3054 domain-containing protein( domain architecture ID 10567952)

uncharacterized DUF3054 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3054 pfam11255
Protein of unknown function (DUF3054); Some members in this family of proteins are annotated ...
 67-178 2.97e-31

Protein of unknown function (DUF3054); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


:

Pssm-ID: 431762  Cd Length: 110  Bit Score: 110.45  E-value: 2.97e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937911279   67 ASGDVLCLLVFSAIGRFSHGLPVLDAETFKTADPFIAGWLLSAYLLGGFGDDAKGRNgVGNAVVVAAKSWAVGIPLGLAI 146
Cdd:pfam11255   1 AVGDVLAVLLFALIGRLSHGEPLTPGGVLETAWPFLVGWLLVAPLLGLYGPARAWSR-PARAWPAGVVVWIVAVPVGLVL 79

                          90       100       110
                  ....*....|....*....|....*....|..
gi 937911279  147 RALSSGHIPPtPFILVAMGSTWVLLTGWRALV 178
Cdd:pfam11255  80 RALFGGGVPW-SFVLVALVFGAVLLLGWRALA 110
 
Name Accession Description Interval E-value
DUF3054 pfam11255
Protein of unknown function (DUF3054); Some members in this family of proteins are annotated ...
 67-178 2.97e-31

Protein of unknown function (DUF3054); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 431762  Cd Length: 110  Bit Score: 110.45  E-value: 2.97e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937911279   67 ASGDVLCLLVFSAIGRFSHGLPVLDAETFKTADPFIAGWLLSAYLLGGFGDDAKGRNgVGNAVVVAAKSWAVGIPLGLAI 146
Cdd:pfam11255   1 AVGDVLAVLLFALIGRLSHGEPLTPGGVLETAWPFLVGWLLVAPLLGLYGPARAWSR-PARAWPAGVVVWIVAVPVGLVL 79

                          90       100       110
                  ....*....|....*....|....*....|..
gi 937911279  147 RALSSGHIPPtPFILVAMGSTWVLLTGWRALV 178
Cdd:pfam11255  80 RALFGGGVPW-SFVLVALVFGAVLLLGWRALA 110
 
Name Accession Description Interval E-value
DUF3054 pfam11255
Protein of unknown function (DUF3054); Some members in this family of proteins are annotated ...
 67-178 2.97e-31

Protein of unknown function (DUF3054); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 431762  Cd Length: 110  Bit Score: 110.45  E-value: 2.97e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937911279   67 ASGDVLCLLVFSAIGRFSHGLPVLDAETFKTADPFIAGWLLSAYLLGGFGDDAKGRNgVGNAVVVAAKSWAVGIPLGLAI 146
Cdd:pfam11255   1 AVGDVLAVLLFALIGRLSHGEPLTPGGVLETAWPFLVGWLLVAPLLGLYGPARAWSR-PARAWPAGVVVWIVAVPVGLVL 79

                          90       100       110
                  ....*....|....*....|....*....|..
gi 937911279  147 RALSSGHIPPtPFILVAMGSTWVLLTGWRALV 178
Cdd:pfam11255  80 RALFGGGVPW-SFVLVALVFGAVLLLGWRALA 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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