|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
36-480 |
0e+00 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 776.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 36 SFLDLAPTSKPESLDVNISWVDTDLDGAeFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKL 115
Cdd:PLN02463 1 ALLELVPETKKENLDFELPRFDPSKSRV-VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSIWPNNYGVWVDEFEAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 116 GLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIVCDDGRKISGS 195
Cdd:PLN02463 80 GLLDCLDTTWPGAVVYIDDGKKKDLDRPYGRVNRKKLKSKMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDGVKIQAS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 196 LIVDASGYASDFIEYDKPRNHGYQVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLV 275
Cdd:PLN02463 160 LVLDATGFSRCLVQYDKPFNPGYQVAYGILAEVDSHPFDLDKMLFMDWRDSHLGNNPELRARNSKLPTFLYAMPFSSNRI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 276 FLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMA 355
Cdd:PLN02463 240 FLEETSLVARPGLPMDDIQERMVARLRHLGIKVKSVEEDEKCVIPMGGPLPVIPQRVLGIGGTAGMVHPSTGYMVARTLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 356 LAPVLAEAIVESLGSTRM--IRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFL 433
Cdd:PLN02463 320 AAPIVADAIVEYLGSSRSnsFRGDELSAEVWNDLWPIERRRQREFFCFGMDILLKLDLDGTRRFFDAFFDLEPHYWHGFL 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2475333194 434 SSRLSVKELAVLSLYLFGHASNLARLDIVTKCTVPLVKLLGNLAIES 480
Cdd:PLN02463 400 SSRLFLPELLLFGLSLFSHASNTSRLEIMAKGTVPLVKMINNLIQDR 446
|
|
| Lycopene_cycl |
pfam05834 |
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ... |
66-459 |
1.82e-175 |
|
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Pssm-ID: 310433 [Multi-domain] Cd Length: 380 Bit Score: 497.33 E-value: 1.82e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 66 DVIIIGTGPAGLRLAEQV--SKYGIKVCCVDPSPLSMWPNNYgVWVDEFEKLG-LEDCLDHKWPVSCVHISDHKTKYLDR 142
Cdd:pfam05834 1 DVVIIGAGPAGLSLAARLaaAKPGLSVVLIEPGPSLLRPNNY-VWSDEFEDLGaLEDCVGHSWPGTRVHFDDGKPILIGR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 143 PYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEF-ESSIVCDDGRKISGSLIVDASGYASDfieyDKPRNHGYQVA 221
Cdd:pfam05834 80 AYGRVSSKRLEEEMLQRCVENGVIRLNAKVESVEADPVgESLVVCEGGRTIRARLVFDARGLGSL----PPGRTLGYQTF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 222 HGILAEVDNHPFDLDKMMLMDWRdshlgNEPYLrvkntKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARL 301
Cdd:pfam05834 156 YGVEVEVDNPPFDPDVMVLMDAR-----VPQPL-----KGPTFLYALPLDPDRLLVEETYLSSGPVLPFDALKKRLAAYL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 302 RHLGIKVRSVLEEEKCVITM--GGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGStrmirgSQL 379
Cdd:pfam05834 226 RALGIRILEVVEEEQGVIPMtlGGDLPNTPQKVLRIGAAAGMVHPATGYSVARSLRLAPKLASAIAAALRL------SSP 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 380 YHRVWNGLWPSDRRRVRECY-CFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLAR 458
Cdd:pfam05834 300 SARAWRDLWPRERWRQRGFFrLLGRMLFLALDIEGRRRFFDAFFRLPKELWQRFLASRLSLADLLRIGLHTPVIPMNRAR 379
|
.
gi 2475333194 459 L 459
Cdd:pfam05834 380 A 380
|
|
| carotene-cycl |
TIGR01790 |
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ... |
66-461 |
5.40e-139 |
|
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Pssm-ID: 130850 [Multi-domain] Cd Length: 388 Bit Score: 404.89 E-value: 5.40e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 66 DVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYG 145
Cdd:TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGVWDDDLSDLGLADCVEHVWPDVYEYRFPKQPRKLGTAYG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 146 RVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIV-CDDGRKISGSLIVDASGYASDFIEYDKPRNHGYQVAHGI 224
Cdd:TIGR01790 81 SVDSTRLHEELLQKCPEGGVLWLERKAIHAEADGVALSTVyCAGGQRIQARLVIDARGFGPLVQYVRFPLNVGFQVAYGV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 225 LAEVDNHPFDLDKMMLMDWRDSHLgNEPYLRvknTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHL 304
Cdd:TIGR01790 161 EARLSRPPHGPSSMVIMDARVDQL-AAPELK---GYRPTFLYAMPLGSTRVFIEETSLADRPALPRDRLRQRILARLNAQ 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 305 GIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGSTrmirgSQLYHRVW 384
Cdd:TIGR01790 237 GWQIKTIEEEEWGALPVGLPGPFLPQRVAAFGAAAGMVHPTTGYSVARALSDAPGLAAAIAQALCQS-----SELATAAW 311
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2475333194 385 NGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLARLDI 461
Cdd:TIGR01790 312 DGLWPTERRRQRYFRLLGRMLFLALEPEERRRFFQRFFGLPEELWERFLAARLSLPDLLRVLLRMFGQPPNPVRSAL 388
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
73-390 |
1.99e-10 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 61.52 E-value: 1.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 73 GPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGV----WVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGR-- 146
Cdd:COG0644 2 GPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGllprALEELEPLGLDEPLERPVRGARFYSPGGKSVELPPGRGGgy 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 147 -VSRKKLKLKLLNSCVENRVKFY-KAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYAS-----DFIEYDKPRNHGYQ 219
Cdd:COG0644 82 vVDRARFDRWLAEQAEEAGAEVRtGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSllarkLGLKRRSDEPQDYA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 220 VA-HGILAEVDNHPFDLDKMMLMDWRDSHLGnepYLrvkntkeptFLYamPFDRNLVfleetslvsrpmlsymevkrrmv 298
Cdd:COG0644 162 LAiKEHWELPPLEGVDPGAVEFFFGEGAPGG---YG---------WVF--PLGDGRV----------------------- 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 299 arlrHLGikvrsvleeekcvITMGGPLPRIP-QNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGSTRMIRGS 377
Cdd:COG0644 205 ----SVG-------------IPLGGPRPRLVgDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEA 267
|
330
....*....|....
gi 2475333194 378 -QLYHRVWNGLWPS 390
Cdd:COG0644 268 lAEYERRLRELLKA 281
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
36-480 |
0e+00 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 776.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 36 SFLDLAPTSKPESLDVNISWVDTDLDGAeFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKL 115
Cdd:PLN02463 1 ALLELVPETKKENLDFELPRFDPSKSRV-VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSIWPNNYGVWVDEFEAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 116 GLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIVCDDGRKISGS 195
Cdd:PLN02463 80 GLLDCLDTTWPGAVVYIDDGKKKDLDRPYGRVNRKKLKSKMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDGVKIQAS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 196 LIVDASGYASDFIEYDKPRNHGYQVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLV 275
Cdd:PLN02463 160 LVLDATGFSRCLVQYDKPFNPGYQVAYGILAEVDSHPFDLDKMLFMDWRDSHLGNNPELRARNSKLPTFLYAMPFSSNRI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 276 FLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMA 355
Cdd:PLN02463 240 FLEETSLVARPGLPMDDIQERMVARLRHLGIKVKSVEEDEKCVIPMGGPLPVIPQRVLGIGGTAGMVHPSTGYMVARTLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 356 LAPVLAEAIVESLGSTRM--IRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFL 433
Cdd:PLN02463 320 AAPIVADAIVEYLGSSRSnsFRGDELSAEVWNDLWPIERRRQREFFCFGMDILLKLDLDGTRRFFDAFFDLEPHYWHGFL 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2475333194 434 SSRLSVKELAVLSLYLFGHASNLARLDIVTKCTVPLVKLLGNLAIES 480
Cdd:PLN02463 400 SSRLFLPELLLFGLSLFSHASNTSRLEIMAKGTVPLVKMINNLIQDR 446
|
|
| Lycopene_cycl |
pfam05834 |
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ... |
66-459 |
1.82e-175 |
|
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Pssm-ID: 310433 [Multi-domain] Cd Length: 380 Bit Score: 497.33 E-value: 1.82e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 66 DVIIIGTGPAGLRLAEQV--SKYGIKVCCVDPSPLSMWPNNYgVWVDEFEKLG-LEDCLDHKWPVSCVHISDHKTKYLDR 142
Cdd:pfam05834 1 DVVIIGAGPAGLSLAARLaaAKPGLSVVLIEPGPSLLRPNNY-VWSDEFEDLGaLEDCVGHSWPGTRVHFDDGKPILIGR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 143 PYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEF-ESSIVCDDGRKISGSLIVDASGYASDfieyDKPRNHGYQVA 221
Cdd:pfam05834 80 AYGRVSSKRLEEEMLQRCVENGVIRLNAKVESVEADPVgESLVVCEGGRTIRARLVFDARGLGSL----PPGRTLGYQTF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 222 HGILAEVDNHPFDLDKMMLMDWRdshlgNEPYLrvkntKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARL 301
Cdd:pfam05834 156 YGVEVEVDNPPFDPDVMVLMDAR-----VPQPL-----KGPTFLYALPLDPDRLLVEETYLSSGPVLPFDALKKRLAAYL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 302 RHLGIKVRSVLEEEKCVITM--GGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGStrmirgSQL 379
Cdd:pfam05834 226 RALGIRILEVVEEEQGVIPMtlGGDLPNTPQKVLRIGAAAGMVHPATGYSVARSLRLAPKLASAIAAALRL------SSP 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 380 YHRVWNGLWPSDRRRVRECY-CFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLAR 458
Cdd:pfam05834 300 SARAWRDLWPRERWRQRGFFrLLGRMLFLALDIEGRRRFFDAFFRLPKELWQRFLASRLSLADLLRIGLHTPVIPMNRAR 379
|
.
gi 2475333194 459 L 459
Cdd:pfam05834 380 A 380
|
|
| carotene-cycl |
TIGR01790 |
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ... |
66-461 |
5.40e-139 |
|
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Pssm-ID: 130850 [Multi-domain] Cd Length: 388 Bit Score: 404.89 E-value: 5.40e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 66 DVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYG 145
Cdd:TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGVWDDDLSDLGLADCVEHVWPDVYEYRFPKQPRKLGTAYG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 146 RVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIV-CDDGRKISGSLIVDASGYASDFIEYDKPRNHGYQVAHGI 224
Cdd:TIGR01790 81 SVDSTRLHEELLQKCPEGGVLWLERKAIHAEADGVALSTVyCAGGQRIQARLVIDARGFGPLVQYVRFPLNVGFQVAYGV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 225 LAEVDNHPFDLDKMMLMDWRDSHLgNEPYLRvknTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHL 304
Cdd:TIGR01790 161 EARLSRPPHGPSSMVIMDARVDQL-AAPELK---GYRPTFLYAMPLGSTRVFIEETSLADRPALPRDRLRQRILARLNAQ 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 305 GIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGSTrmirgSQLYHRVW 384
Cdd:TIGR01790 237 GWQIKTIEEEEWGALPVGLPGPFLPQRVAAFGAAAGMVHPTTGYSVARALSDAPGLAAAIAQALCQS-----SELATAAW 311
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2475333194 385 NGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLARLDI 461
Cdd:TIGR01790 312 DGLWPTERRRQRYFRLLGRMLFLALEPEERRRFFQRFFGLPEELWERFLAARLSLPDLLRVLLRMFGQPPNPVRSAL 388
|
|
| PLN02697 |
PLN02697 |
lycopene epsilon cyclase |
66-462 |
1.28e-97 |
|
lycopene epsilon cyclase
Pssm-ID: 215375 [Multi-domain] Cd Length: 529 Bit Score: 304.04 E-value: 1.28e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 66 DVIIIGTGPAGLRLAEQVSKYGIKVCCVDPS-PLSmwpNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPY 144
Cdd:PLN02697 110 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDlPFT---NNYGVWEDEFKDLGLEDCIEHVWRDTIVYLDDDKPIMIGRAY 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 145 GRVSRKKLKLKLLNSCVENRVKFYKAKVLKV-KHEEFESSIVCDDGRKISGSLIVDASGYAS-DFIEYD--KPRNhGYQV 220
Cdd:PLN02697 187 GRVSRTLLHEELLRRCVESGVSYLSSKVDRItEASDGLRLVACEDGRVIPCRLATVASGAASgRLLQYEvgGPRV-CVQT 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 221 AHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNtkePTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVAR 300
Cdd:PLN02697 266 AYGVEVEVENNPYDPSLMVFMDYRDYFKEKVSHLEAEY---PTFLYAMPMSSTRVFFEETCLASKDAMPFDLLKKRLMSR 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 301 LRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESL------GSTRMI 374
Cdd:PLN02697 343 LETMGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIARILknvssgGKLGTS 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 375 RGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHAS 454
Cdd:PLN02697 423 NSSNISMQAWNTLWPQERKRQRAFFLFGLALILQLDTEGIRTFFVTFFRLPKWMWQGFLGSTLSSVDLILFALYMFVIAP 502
|
....*...
gi 2475333194 455 NLARLDIV 462
Cdd:PLN02697 503 NQLRMQLV 510
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
73-390 |
1.99e-10 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 61.52 E-value: 1.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 73 GPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGV----WVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGR-- 146
Cdd:COG0644 2 GPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGllprALEELEPLGLDEPLERPVRGARFYSPGGKSVELPPGRGGgy 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 147 -VSRKKLKLKLLNSCVENRVKFY-KAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYAS-----DFIEYDKPRNHGYQ 219
Cdd:COG0644 82 vVDRARFDRWLAEQAEEAGAEVRtGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSllarkLGLKRRSDEPQDYA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 220 VA-HGILAEVDNHPFDLDKMMLMDWRDSHLGnepYLrvkntkeptFLYamPFDRNLVfleetslvsrpmlsymevkrrmv 298
Cdd:COG0644 162 LAiKEHWELPPLEGVDPGAVEFFFGEGAPGG---YG---------WVF--PLGDGRV----------------------- 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 299 arlrHLGikvrsvleeekcvITMGGPLPRIP-QNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGSTRMIRGS 377
Cdd:COG0644 205 ----SVG-------------IPLGGPRPRLVgDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEA 267
|
330
....*....|....
gi 2475333194 378 -QLYHRVWNGLWPS 390
Cdd:COG0644 268 lAEYERRLRELLKA 281
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
64-98 |
2.74e-06 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 49.70 E-value: 2.74e-06
10 20 30
....*....|....*....|....*....|....*
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPL 98
Cdd:COG1249 3 DYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRL 37
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
64-99 |
6.04e-06 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 48.64 E-value: 6.04e-06
10 20 30
....*....|....*....|....*....|....*.
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLS 99
Cdd:PRK06292 3 KYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLG 38
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
64-255 |
1.20e-05 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 47.24 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSP-LSMWPNNYGVW---VDEFEKLGLED-CLDHKWPVSCVHISDHKTk 138
Cdd:COG0654 3 RTDVLIVGGGPAGLALALALARAGIRVTVVERAPpPRPDGRGIALSprsLELLRRLGLWDrLLARGAPIRGIRVRDGSD- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 139 ylDRPYGRVSRKKLKLKLLNScVENRV---------------KFYKAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGY 203
Cdd:COG0654 82 --GRVLARFDAAETGLPAGLV-VPRADleralleaaralgveLRFGTEVTGLEQDADGVTVTLADGRTLRADLVVGADGA 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2475333194 204 AS--------DFIEYDKPRNHGY-QVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLR 255
Cdd:COG0654 159 RSavrrllgiGFTGRDYPQRALWaGVRTELRARLAAAGPRLGELLELSPRSAFPLRRRRAE 219
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
65-101 |
5.80e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 45.32 E-value: 5.80e-05
10 20 30
....*....|....*....|....*....|....*..
gi 2475333194 65 FDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMW 101
Cdd:PRK09126 4 SDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPLAAL 40
|
|
| PRK08294 |
PRK08294 |
phenol 2-monooxygenase; Provisional |
63-97 |
6.90e-05 |
|
phenol 2-monooxygenase; Provisional
Pssm-ID: 236223 [Multi-domain] Cd Length: 634 Bit Score: 45.36 E-value: 6.90e-05
10 20 30
....*....|....*....|....*....|....*.
gi 2475333194 63 AEFDVIIIGTGPAGLRLAEQVSKY-GIKVCCVDPSP 97
Cdd:PRK08294 31 DEVDVLIVGCGPAGLTLAAQLSAFpDITTRIVERKP 66
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
64-145 |
1.49e-04 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 44.07 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLS---------MWPNNygvwVDEFEKLGLEDCLDH-KWPVSCVHIS 133
Cdd:PTZ00367 33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFSkpdrivgelLQPGG----VNALKELGMEECAEGiGMPCFGYVVF 108
|
90
....*....|..
gi 2475333194 134 DHKTKYLDRPYG 145
Cdd:PTZ00367 109 DHKGKQVKLPYG 120
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
64-94 |
2.20e-04 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 43.47 E-value: 2.20e-04
10 20 30
....*....|....*....|....*....|.
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVD 94
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVE 31
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
65-90 |
1.01e-03 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 41.41 E-value: 1.01e-03
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
65-94 |
1.84e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 40.38 E-value: 1.84e-03
10 20 30
....*....|....*....|....*....|
gi 2475333194 65 FDVIIIGTGPAGLRLAEQVSKYGIKVCCVD 94
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE 30
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
65-97 |
2.70e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 39.89 E-value: 2.70e-03
10 20 30
....*....|....*....|....*....|...
gi 2475333194 65 FDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSP 97
Cdd:PRK07494 8 TDIAVIGGGPAGLAAAIALARAGASVALVAPEP 40
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
64-94 |
4.81e-03 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 39.37 E-value: 4.81e-03
10 20 30
....*....|....*....|....*....|.
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVD 94
Cdd:PRK05249 5 DYDLVVIGSGPAGEGAAMQAAKLGKRVAVIE 35
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
66-135 |
6.70e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 38.70 E-value: 6.70e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2475333194 66 DVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLsmWpNNYGVW-------VDEFEKLG-LEDCLDHKWPVSCVHISDH 135
Cdd:PRK06847 6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPE--W-RVYGAGitlqgnaLRALRELGvLDECLEAGFGFDGVDLFDP 80
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
64-98 |
7.83e-03 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 38.68 E-value: 7.83e-03
10 20 30
....*....|....*....|....*....|....*...
gi 2475333194 64 EFDVIIIGTGPAGLRLAEQVSKYGIKVCCVD---PSPL 98
Cdd:TIGR01438 2 DYDLIVIGGGSGGLAAAKEAAAYGAKVMLLDfvtPTPL 39
|
|
|