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Conserved domains on  [gi|571254810|emb|CAP12394|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Poecilimon jonicus lobulatus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-142 2.88e-64

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 198.07  E-value: 2.88e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRS 137
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-142 2.88e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 198.07  E-value: 2.88e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRS 137
NADHdh pfam00146
NADH dehydrogenase;
14-143 4.35e-42

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 141.07  E-value: 4.35e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   14 LMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 571254810   94 MIYPYMTMLV--SFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAA 134
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-143 5.33e-41

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.11  E-value: 5.33e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   5 EVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPII 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 571254810  85 SLFLALLVWMIYPYMTMLV--SFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAA 147
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-142 2.88e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 198.07  E-value: 2.88e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRS 137
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-142 5.97e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 184.47  E-value: 5.97e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   7 VLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISL 86
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 571254810  87 FLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRA 136
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-142 3.68e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 182.38  E-value: 3.68e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   7 VLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 571254810  87 FLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRA 136
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-142 3.03e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 152.20  E-value: 3.03e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRA 137
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-142 8.22e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 151.31  E-value: 8.22e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  14 LMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLFLALLVW 93
Cdd:MTH00104   7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 571254810  94 MIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00104  87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRA 135
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-142 1.36e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 150.45  E-value: 1.36e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRA 137
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 8-142 2.24e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 150.05  E-value: 2.24e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   8 LSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLF 87
Cdd:MTH00111   6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 571254810  88 LALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00111  86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRA 140
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-142 1.40e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 145.53  E-value: 1.40e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  86 LFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRA 140
NADHdh pfam00146
NADH dehydrogenase;
14-143 4.35e-42

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 141.07  E-value: 4.35e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   14 LMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 571254810   94 MIYPYMTMLV--SFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAA 134
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-142 7.17e-42

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 141.27  E-value: 7.17e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   4 YEVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPI 83
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 571254810  84 ISLFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRA 139
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 11-142 8.81e-42

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 140.69  E-value: 8.81e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  11 MSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLFLAL 90
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 571254810  91 LVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00010  87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRS 138
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-143 5.33e-41

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.11  E-value: 5.33e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   5 EVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPII 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 571254810  85 SLFLALLVWMIYPYMTMLV--SFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAA 147
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-142 5.55e-41

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 138.97  E-value: 5.55e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   3 LYEVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAP 82
Cdd:MTH00134   2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  83 IISLFLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:MTH00134  82 MLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRA 141
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-143 2.90e-39

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 134.55  E-value: 2.90e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  86 LFLALLVWMIYPYMTMLV--SFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:PRK06076  89 FIPAFLAWAVIPFGPELViaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAA 148
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-143 1.98e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 129.85  E-value: 1.98e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   2 NLYEVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLA 81
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 571254810  82 PIISLFLALLVWMIYPYM--TMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAA 144
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-143 7.99e-35

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 122.91  E-value: 7.99e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   6 VVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIIS 85
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  86 LFLALLVWMIYPYMT--MLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAA 140
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-144 9.13e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 106.14  E-value: 9.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  14 LMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISLFLALLVW 93
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 571254810  94 MIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRASC 144
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASS 133
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-143 2.07e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 106.64  E-value: 2.07e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   1 MNLYEVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYL 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 571254810  81 APIISLFLALLVWMIYPY--MTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:MTH00029  81 APIISFTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCA 145
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-143 9.80e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 85.36  E-value: 9.80e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   7 VLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLAPIISL 86
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 571254810  87 FLALLVWMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRAS 143
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSA 137
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-142 1.38e-15

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 71.91  E-value: 1.38e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   2 NLYEVVLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPNKVGFVGLPQPLADAMKLFTKEGSNPVLSNYVLYYLA 81
Cdd:CHL00032  22 EVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIG 101

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 571254810  82 P---IISLFLALLVwMIYPYMTMLVSFNLGLLFFLCCTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:CHL00032 102 PsiaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRA 164
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-142 3.63e-03

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 36.31  E-value: 3.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810   7 VLSVMSSLMLIICVLVGMAFLILLERKVLGYIQIRKGPnkvgfvGLPQPLADAMKLFTKEGSNPVLSNyVLYYLAPIISL 86
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254810  87 ----FLALLVWMIYPYMTMLVSFNLGLLFFLccTSMGVYTVMIAGWSSNSNYALLGGLRA 142
Cdd:COG0650   74 aamlLAALLVPVLTTGPPLSFSGDLIVLVYL--LALARFFLALAGLDSGSPFGGIGASRE 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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