|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-700 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1304.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 1 AWVIPLLPLPVIMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGY 80
Cdd:CHL00025 8 AWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT 160
Cdd:CHL00025 88 LIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 161 RPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLH 240
Cdd:CHL00025 168 RPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLH 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 241 VWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQL 320
Cdd:CHL00025 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 321 GYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCG 400
Cdd:CHL00025 328 GYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 401 IPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWGKSIPKEV 480
Cdd:CHL00025 408 IPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKI 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 481 NKDFVLSTI--KSGVSFFSQNISQIPSNTRKKIGFFSIPFGAKNTFVYPRETGNTMLFPLLILLLFTLFIGSIGIHFDNG 558
Cdd:CHL00025 488 NKLLLLLTMnnNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQE 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 559 VMDngmseLTILSKWLSPSISFFHESSNSSINSYEFLINAISSVSLAIFGLFIAYIFYGSAYSFFQNLNLKNSFvkVKGN 638
Cdd:CHL00025 568 GID-----LDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSF--VKGG 640
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 639 PKKFFLDQVKKKIYSWSYNRGYIDIFYTRVFILGIRRLAELTHFFDKDVIDGIINGVGLVGF 700
Cdd:CHL00025 641 PKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSF 702
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-698 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 674.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 1 AWVIPLLPLPVIMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGY 80
Cdd:PRK07376 8 AWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT 160
Cdd:PRK07376 88 VIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYD 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 161 RPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLH 240
Cdd:PRK07376 168 RKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLH 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 241 VWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQL 320
Cdd:PRK07376 248 VWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 321 GYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCG 400
Cdd:PRK07376 328 GYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 401 IPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRvhfqnysSTKEGSLYSISLWGKSIPKEV 480
Cdd:PRK07376 408 IPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFR-------GNDKELQKELLAAADAPGHHE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 481 NKDFVLSTIKSGVSffsqnisqipsntrkkigffsipfgakntfvYPRETGNTMLFPLLILLLFTLFIGSIGIHFDNgvm 560
Cdd:PRK07376 481 GHHEEHGEHHHHSG-------------------------------SPHESPWTMTLPLVVLAVPSVLIGLLGTPWNN--- 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 561 dngmseltILSKWLSPSISFFHESSNSSINsyEFLINAISSVSLAIFGLFIAYIFYGSaysffqnlnlknsfvkvkgnpK 640
Cdd:PRK07376 527 --------RFEAFLHAPGEALEAAAHFEWG--EFLILAGASVGIALIGITLASLMYLL---------------------K 575
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 405109213 641 KFFLDQVKKK---IYSWSYNRGYIDIFYTRVFILGIRRLAELTHFFDKDVIDGIINGVGLV 698
Cdd:PRK07376 576 KIDPAAIAERfppLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLV 636
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-698 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 553.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 1 AWVIPLLPLpvimsmgFGLFIIPTATKNLRRIWAF-PSVLLLSIALVFSVYLsIQQIKGSSIYQYLWSWTINNDFSLEFG 79
Cdd:COG1009 4 LWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 80 YLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 159
Cdd:COG1009 76 FRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 160 TRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNnGINSLLTTLCAFLLFLGAVAKSAQFPL 239
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL----AAAPT-ILSSPLLTLILLLLLLGAFGKSAQFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 240 HVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQ 319
Cdd:COG1009 231 HFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQ 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 320 LGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMVLMGGLKKYVPITRTTFLLGTLSLC 399
Cdd:COG1009 311 LGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 400 GIPPLACFWSKDEILSNSW---LYSPFFGIIASFTAGLTAFYMFRIYLLTFdgylrvhfqnysstkegslysislWGKSI 476
Cdd:COG1009 382 GIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGKPR 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 477 PKEVNKdfvlstiksgvsffsqnisqipsntrkkigffsipfgakntfvyPRETGNTMlfpllILLLFTLFIGSIGIhfd 556
Cdd:COG1009 438 PKTPKH--------------------------------------------PHESPWLM-----TLPLVVLAVLSLVL--- 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 557 ngvmdnGMSELTILSKWLSPSISFFHESSnssiNSYEFLINAISSVsLAIFGLFIAYIFYgsaysffqnlnLKNSFVKVK 636
Cdd:COG1009 466 ------GLLLPGLLEGLLAPAAVLGGELH----LAHGLLLNALPLL-LSLLGIALGYLLY-----------LKRPLPALA 523
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 637 gnpkkffldQVKKKIYSWSYNRGYIDIFYTRVFILGIRRLAELThFFDKDVIDGIINGVGLV 698
Cdd:COG1009 524 ---------ERLKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARL 575
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-696 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 545.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 1 AWVIPLLPLpvIMSMGFGLFiiptatknLRRIWAFPS----VLLLSIALVFSVYLSIQ--QIKGSSIYQYLWSWTINNDF 74
Cdd:PRK06590 5 LWLIVLLPL--IGALILGLF--------GRRIGEKWAhlvgTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGDF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 75 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 154
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 155 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnnGINSLLTTLCAFLLFLGAVAKS 234
Cdd:PRK06590 155 IGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFF---GLGWSALTLICLLLFIGAMGKS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 235 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAY 314
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 315 STMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLG 394
Cdd:PRK06590 312 STMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 395 TLSLCGIPPLACFWSKDEILSNSW-LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNysstkegslysislwg 473
Cdd:PRK06590 384 TLALIGIPPFAGFFSKDEILEAAFaNGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHH---------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 474 ksipkevnkdfvlstiksgvsffsqnisqipsntrkkigffsipfgakntfvyPRETGNTMlfpllILLLFTLFIGSIGI 553
Cdd:PRK06590 448 -----------------------------------------------------PHESPAVM-----TLPLIVLAVLSVFA 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 554 hfdngvmdnGMSELTILSKWLSPSISFFHESSNSSInsyeFLINAISSVSLAIFGLFIAYIFYGSAYSFFQNLNLKNSFv 633
Cdd:PRK06590 470 ---------GALIVPPFLGVLPLTTELAHGEAEHHL----PVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRF- 535
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 405109213 634 kvkgnpkkffldqvkkkIYSWSYNRGYIDIFYTRVFILGIRRlaeLTHFFDKDVIDGIINGVG 696
Cdd:PRK06590 536 -----------------LYTLLRNKYYFDELYEKVFVKPGLA---LARLLWKDGDDGIIDGLV 578
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-698 |
1.32e-157 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 468.68 E-value: 1.32e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQQIKGSS---IYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 113
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 114 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWIT 193
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 194 GSLEFRDLFKIANNWIPNnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 273
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 274 LPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 353
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 354 GSVIHSMEplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFT 431
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 432 AGLTAFYMFRIYLLTFDGYLRVHfqnysstkegslysislwgksipkevnkdfvlstiksgvsffsqnisqipsntrkki 511
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHGKERHE--------------------------------------------------------- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 512 gffsipfgaknTFVYPRETGNTMLFPLLILLLFTLFIGSIGIHFdngvmdngmseltilSKWLSPsiSFFHESSNSSINS 591
Cdd:TIGR01974 442 -----------ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPL---------------FEFLKG--VLPTSAEPALEHH 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 592 YEFLINAISSVSLAIFGLFIAYIFYgsaysffqnlnLKNSFVKVKgnpkkffLDQVKKKIYSWSYNRGYIDIFYTRVFIL 671
Cdd:TIGR01974 494 HVPALEIWSPTAVAILGILLAYLLY-----------LGNPTLPAK-------IAQRHSGLYRLLLNKWYFDELYDKVFVK 555
|
650 660
....*....|....*....|....*...
gi 405109213 672 GIRRLAELTHFF-DKDVIDGIINGVGLV 698
Cdd:TIGR01974 556 PYLFLGKLLWKDpDDKIIDGFGPGIARL 583
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
58-447 |
2.87e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 354.31 E-value: 2.87e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 58 GSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNL 137
Cdd:MTH00210 54 GSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 138 IQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGInsl 217
Cdd:MTH00210 134 VQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL--- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 218 lTTLCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFL 297
Cdd:MTH00210 211 -TIIC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFF 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 298 GATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLM 377
Cdd:MTH00210 289 AATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKM 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 378 GGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTF 447
Cdd:MTH00210 361 GGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
40-465 |
4.64e-111 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 348.61 E-value: 4.64e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 40 LLSIALVFSVYLSIQQIKGSS-IYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFF 118
Cdd:MTH00020 35 CLIISLSWSFLIFYEILFNSStTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 119 VYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEF 198
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 199 RDLFKIANNwIPNNGInslltTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFI 278
Cdd:MTH00020 195 SSVFNMVVS-APSSDI-----TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 279 SLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIH 358
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 359 SMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTA 436
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFSALLTA 420
|
410 420
....*....|....*....|....*....
gi 405109213 437 FYMFRIYLLTFDGYLRVHFQNYSSTKEGS 465
Cdd:MTH00020 421 FYSIRLIYLTFLSNTNLKKAVFFHLHEGD 449
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
441-684 |
3.45e-99 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 304.92 E-value: 3.45e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 441 RIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWGKSIPKEVNKDFVL-----STIKSGVSFFSQNISQIPSNTRKKIGFF- 514
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTlllltMNNNEKVSFFSKKTYRIDGNVRNMTRPFi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 515 -SIPFGAKNTFVYPRETGNTMLFPLLILLLFTLFIGSIGIHFDNGVMDngmseLTILSKWLSPSISFFHESSNSSINSYE 593
Cdd:pfam01010 81 tITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGID-----LDILSKWLTPSINLLHKNSNNSVDWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 594 FLINAISSVSLAIFGLFIAYIFYGSAYSFFQNLNLKNSFvkVKGNPKKFFLDQVKKKIYSWSYNRGYIDIFYTRVFILGI 673
Cdd:pfam01010 156 FVTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSF--VKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGI 233
|
250
....*....|.
gi 405109213 674 RRLAELTHFFD 684
Cdd:pfam01010 234 RGLAELTHFFD 244
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
66-453 |
6.76e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 298.02 E-value: 6.76e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 66 WSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWE 145
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 146 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnngINSLLTTLCAFL 225
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 226 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQ 305
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 306 RDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKKYVP 385
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 386 ITRTTFLLGTLSLCGIPPLACFWSKDEILSNswLYSPFFGIIASFTA----GLTAFYMFRIYLLTFDGYLRV 453
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGYPRF 431
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-433 |
2.68e-87 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 275.73 E-value: 2.68e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 134 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwipNNG 213
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAL-----TGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 214 INSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLLARLLPLF-ISLPLIMNFISLVG 291
Cdd:pfam00361 76 LNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 292 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgysp 368
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 405109213 369 dKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAG 433
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
3-414 |
7.67e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 283.77 E-value: 7.67e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 3 VIPLLPLPVIMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYlsiqqIKGSSIYQYLWSWTINNDFSLEFGYLI 82
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVL-----INDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 83 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 162
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 163 IAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEF---------RDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAK 233
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 234 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLA 313
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 314 YSTMSQLGYMMLALGI-GSYQAALFHLITHAYSKALLFLGSGSVIHSMEPlvgyspdKSQNMVLMGGLKKYVPITRTTFL 392
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 405109213 393 LGTLSLCGIPPLACFWSKDEIL 414
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-449 |
1.78e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 270.63 E-value: 1.78e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 1 AWVIPLLPLpvimsMGfGLFIIPTATKNLRRIWAFPS----VLLLSIALVFSVyLSIQQIKGSSIYQYLWSWTINNDFSL 76
Cdd:PRK07390 9 SWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAaylnLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 77 EFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIG 156
Cdd:PRK07390 82 SLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 157 FWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNGINSLLTTLCAFLLFLGAVAKSAQ 236
Cdd:PRK07390 162 FWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA----AWAATANLDPLTATLLGLALIAGPTGKCAQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 237 FPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYST 316
Cdd:PRK07390 238 FPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYST 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 317 MSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSmeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTL 396
Cdd:PRK07390 317 SAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSA 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 405109213 397 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 449
Cdd:PRK07390 388 GLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
107-454 |
1.53e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 267.80 E-value: 1.53e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 107 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 186
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 187 LGFFWITGSLEFRDLFkiannwIPNNginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 266
Cdd:MTH00004 187 AWLAMTLNTWEIQQLF------SPTQ-----TPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 267 IFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSK 346
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 347 ALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKD---EILSNSWLYSpf 423
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA-- 405
|
330 340 350
....*....|....*....|....*....|..
gi 405109213 424 FGIIASFTA-GLTAFYMFRIYLLTFDGYLRVH 454
Cdd:MTH00004 406 WALLLTLLAtSFTAAYSLRMILLVQTGFPRTP 437
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-447 |
3.94e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 264.91 E-value: 3.94e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQqikgsSIYQYLWSWTINNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDDYMSHDE 112
Cdd:MTH00208 65 LAFLSLINLLIWILLGCP-----NINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 113 GYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWI 192
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 193 TGSLEFrdlfkiaNNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLAR 272
Cdd:MTH00208 216 FNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 273 LLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLG 352
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 353 SGSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSwLYSP--FFGIIASF 430
Cdd:MTH00208 369 SGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAG-LASIsnLLSIILAL 439
|
410
....*....|....*...
gi 405109213 431 TAGL-TAFYMFRIYLLTF 447
Cdd:MTH00208 440 IATLlTAVYSFRIIFFCF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
4-443 |
1.84e-77 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 254.69 E-value: 1.84e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 4 IPLLPLPVIMSMgFGLFIIPTATKNLRRIWAFpSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTinndFSLEFGYLID 83
Cdd:COG0651 2 SHLLILPVLLPL-LAAALLLLLGRRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 84 PLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 163
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 164 AASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWL 243
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAE------LDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 244 PDAM-EGPTPISALIHAAtMVAAGIFLLARLLPLFIS---LPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQ 319
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFGadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 320 LGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTL 396
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 405109213 397 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIAS-FTAGLTAFYMFRIY 443
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
66-442 |
3.51e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 258.68 E-value: 3.51e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 66 WSWTINNDFSLEFGYLIDpLTSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYF 142
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD-QYSIIFLpiaLFVTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 143 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnginsllTTLC 222
Cdd:MTH00066 141 GWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 223 AFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLA 302
Cdd:MTH00066 210 LLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 303 LAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKK 382
Cdd:MTH00066 290 LTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQK 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 405109213 383 YVPITRTTFLLGTLSLCGIPPLACFWSKDEILS-------NSWlySPFFGIIA-SFtaglTAFYMFRI 442
Cdd:MTH00066 362 ALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIAtSF----TAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-434 |
4.60e-74 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 254.07 E-value: 4.60e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 73 DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 152
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 153 LLIGFWFTRPIA-ASACQKAFVTNrVGDFGLLLGILGFFWITGSLEFRDLFKIannwipNNGI-NSLLTTLCAFLLFLGA 230
Cdd:PRK12647 133 LLIGFNHEREAArRAALQALLVTG-GGGLALLAGLILLGNVTGTYSLSELLAS------GDVIrEHPLYLAILLLVLGGA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 231 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKR 310
Cdd:PRK12647 206 FTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 311 SLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLKKYVPIT 387
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPIT 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 405109213 388 RTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGL 434
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNAL 406
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
107-442 |
5.74e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 247.82 E-value: 5.74e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 107 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLllgI 186
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 187 LGFFWI---TGSLEFRDLFKIANNwipnnginsLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 263
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKD---------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 264 AAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHA 343
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 344 YSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWL- 419
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....*
gi 405109213 420 -YSPFFGIIA-SFtaglTAFYMFRI 442
Cdd:MTH00137 411 aWALTLTLIAtSF----TAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
107-452 |
2.94e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 242.84 E-value: 2.94e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 107 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 186
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 187 LGFFWITGSLEFRDLFKIANNwipnnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 266
Cdd:MTH00108 187 AWFLLNLNSWDLQQIFMLNPN----------NSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 267 IFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSK 346
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 347 ALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL-------SNSWL 419
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWA 408
|
330 340 350
....*....|....*....|....*....|...
gi 405109213 420 YSpfFGIIASftaGLTAFYMFRIYLLTFDGYLR 452
Cdd:MTH00108 409 LL--ITLIAT---SLTAAYSTRIIFFALLGQPR 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
20-410 |
4.47e-71 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 246.76 E-value: 4.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 20 FIIPTATKNLRRIWAFPSVLLLSIALV--FSVYLSIQQIKGSSIYQYLWSWTINNDFSLefgyLIDPLTSIMLILITTVG 97
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVLFiyFLSLIPTTMSGNTVMKTLPWIPSLGINFTL----YVDGLSLLFALLITGIG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 98 ILVLIYSDDYMS-HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNR 176
Cdd:PRK12645 92 SLVVLYSIYYLSkKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 177 VGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISAL 256
Cdd:PRK12645 172 FGGLSMLGGFILLYIMTGSFSIREMIANADEIQ-----NSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAY 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 257 IHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS----- 331
Cdd:PRK12645 247 LHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhy 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 332 -----------YQAALFHLITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLKKYVPITRTTFLLGTLSLCG 400
Cdd:PRK12645 327 qgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAG 397
|
410
....*....|
gi 405109213 401 IPPLACFWSK 410
Cdd:PRK12645 398 LPPFNGFLSK 407
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
21-443 |
8.12e-68 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 237.82 E-value: 8.12e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 21 IIPTATKNLRRIWAfpSVLLLSIALV-FSVYLSIQQIKGS-SIYQYLWSWTinNDFSLEFGYLIDPLTSIMLILITTVGI 98
Cdd:TIGR00940 14 LIPILYPSDQRIHI--GWFVLAIPLVcFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 99 LVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVG 178
Cdd:TIGR00940 90 LVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 179 DFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIH 258
Cdd:TIGR00940 170 GLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 259 AATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS------- 331
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 332 ---------YQAALFHLITHAYSKALLFLGSGSVIHSmeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIP 402
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 405109213 403 PLACFWSKDEILS-------------NSWLY-SPFFGIIAS-FTAGLTAFYMFRIY 443
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASvFTFVYSLRFIHGVF 451
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
38-427 |
8.17e-68 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 230.25 E-value: 8.17e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 38 VLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNdfSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMS-------H 110
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD--VALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpV 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 111 DEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLGILGFF 190
Cdd:PRK06525 109 HEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 191 WITGSLEFRDLfkiannwipnNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLL 270
Cdd:PRK06525 188 LQTGTFALSAL----------SGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 271 ARLLPLFISLPLIMNFI-SLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY------QAALFHLITHA 343
Cdd:PRK06525 258 ARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHA 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 344 YSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPF 423
Cdd:PRK06525 338 FAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVE 408
|
....
gi 405109213 424 FGII 427
Cdd:PRK06525 409 YWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
3-410 |
2.52e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 238.55 E-value: 2.52e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 3 VIPLLPLpvimsmgFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLsIQQIKGSSIYQYLWSW--TINNDFSLEfgy 80
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAEAWLAGLVALAALVLLALL-YPAVAAGEVIRAEIEWlpALGLNLSLR--- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 lIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT 160
Cdd:PRK12648 74 -LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 161 RPIAASACQKAFVTNRVGDFGLLLGILGFFWITGS------LEFRDLFKiANNWIPnnginsllTTLCafLLFLGAVAKS 234
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSydldvvLAAGDLIR-AHPLYP--------PALV--LILLGAFTKS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 235 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAY 314
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 315 STMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTF 391
Cdd:PRK12648 302 STISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET---------GTRDMRRLSGLRRLMPITATLA 372
|
410
....*....|....*....
gi 405109213 392 LLGTLSLCGIPPLACFWSK 410
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSK 391
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-411 |
1.64e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 220.09 E-value: 1.64e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 76 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLI 155
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 156 GFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKiaNNWIPNNGINSLLTTLCAFLLFLGAVAKSA 235
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 236 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYS 315
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 316 TMSQLGYMMLALGIGSYQ-------AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITR 388
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 405109213 389 TTFLLGTLSLCGIPPLACFWSKD 411
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-410 |
5.88e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 220.57 E-value: 5.88e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 66 WSWTinNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFW 144
Cdd:PRK12644 58 VPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 145 ELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWipnngiNSLLTTLCAF 224
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL--LADPP------TGPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 225 LLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALA 304
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 305 QRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHL---ITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLK 381
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLG 358
|
330 340
....*....|....*....|....*....
gi 405109213 382 KYVPITRTTFLLGTLSLCGIPPLACFWSK 410
Cdd:PRK12644 359 RRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
37-471 |
2.13e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 212.69 E-value: 2.13e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 116
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 117 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVGDFGLLLGIlGFFWITGSL 196
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 197 EFrdlfkIANNWIPNNGINSLLTTlcaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPL 276
Cdd:MTH00165 165 NF-----IFYLDFMKNSFEMLLIG---LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 277 FISlPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSV 356
Cdd:MTH00165 237 LFS-SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 357 IHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKD---EILSNSWLySPFFGIIASFTAG 433
Cdd:MTH00165 316 IHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNL-NFFIFFLFFFSTG 386
|
410 420 430
....*....|....*....|....*....|....*....
gi 405109213 434 LTAFYMFR-IYLLTFDGYLRVHFQNYSSTKEGSLYSISL 471
Cdd:MTH00165 387 LTVSYSFRlIYYSMSGDFNLKSLNNLSDESKFMLKSMIL 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
76-411 |
3.53e-58 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 210.77 E-value: 3.53e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 76 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 154
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 155 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKS 234
Cdd:PRK12646 150 ISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIK-----NHGLFIPMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 235 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAY 314
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 315 STMSQLGYMMLALGIG-----------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLM 377
Cdd:PRK12646 305 STISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRIL 375
|
330 340 350
....*....|....*....|....*....|....
gi 405109213 378 GGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKD 411
Cdd:PRK12646 376 SGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
38-447 |
4.46e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 203.34 E-value: 4.46e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 38 VLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 117
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 118 FVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFF----WIT 193
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMLmhgnWNI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 194 GSLEFrdlfkiannwipNNGINSLLttlcAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 273
Cdd:MTH00209 165 FYLNF------------NSNLGSVI----SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 274 LPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 353
Cdd:MTH00209 229 FPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 354 GSVIHSMEplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILsNSWLYSPFFGIIAS---F 430
Cdd:MTH00209 309 GNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfL 379
|
410
....*....|....*..
gi 405109213 431 TAGLTAFYMFRIYLLTF 447
Cdd:MTH00209 380 STSLTAAYSMRLSYFSL 396
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
62-444 |
3.94e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 198.45 E-value: 3.94e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 62 YQYLWSWTINNDFS--LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQ 139
Cdd:MTH00207 33 KTILIEWEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 140 IYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVGDFGLLLGILgffWITGSlefrdlfkiaNNWIPNNGINSLLT 219
Cdd:MTH00207 113 LLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIG---WTLNQ----------GHWSITNMWQTDMN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 220 TLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGA 299
Cdd:MTH00207 179 NYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 300 TLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdKSQNMVLMGG 379
Cdd:MTH00207 259 LSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGN 330
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 405109213 380 LKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSwLYSPFFGIIAS---FTAGLTAFYMFRIYL 444
Cdd:MTH00207 331 LTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS-LFYPHNSLMILmifLATALTAAYSTRFTL 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-449 |
5.73e-54 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 193.77 E-value: 5.73e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 2 WVIPLLPLPVIMSMgFGLFIIPT---ATKNLRRIWAfpsVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINN------ 72
Cdd:PRK08376 2 LGEHLPPLLIIIPL-FGAFSMPIvslLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgs 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 73 -DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 151
Cdd:PRK08376 78 gGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 152 YLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLefrDLFKIANNWIpnngINSLLTTLCAFLLFLGAV 231
Cdd:PRK08376 158 YALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL---NMAYLAVKMS----ENPTVVAKIALALFIAGL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 232 A-KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLLAR-LLPLF---ISLPLIMNFISLVGTITLFLGATLALAQ 305
Cdd:PRK08376 231 AmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 306 RDIKRSLAYSTMSQLGYMMLALGIG---------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdK 370
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------G 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 405109213 371 SQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 449
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-447 |
5.24e-53 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 190.29 E-value: 5.24e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 9 LPVIMsmGFGLFIIPTATKNLRRIWAFpsvLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPLTSI 88
Cdd:COG1008 12 LPLLG--ALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 89 MLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW-FTRPIAASA 167
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWgGERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 168 cqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNginsllTTLCAFLLFLGAVA-KSAQFPLHVWLPDA 246
Cdd:COG1008 165 --KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLT------AQLLLFLAFFIAFAvKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 247 -MEGPTPISAlIHAATMVAAGIFLLARL-LPLFislPL----IMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQL 320
Cdd:COG1008 236 hVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PEasayFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 321 GYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLS 397
Cdd:COG1008 312 GFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALA 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 405109213 398 LCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 447
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVF 432
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
37-442 |
1.17e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 191.21 E-value: 1.17e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQQIKGSSiyqYLWSWTINNDFSLEFGY--LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGY 114
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 115 LRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFvTNRVGDFGLLLGILGF-FWIT 193
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLvLLGH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 194 GSLEFRDLFKiannwipnnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 273
Cdd:MTH00151 164 WSILSMWDFK--------------LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 274 LPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 353
Cdd:MTH00151 230 FPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 354 GSVIHSMeplvgyspDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSwLYSP---FFGIIASF 430
Cdd:MTH00151 310 GSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESS-LMSPtslLMVLLMFV 380
|
410
....*....|..
gi 405109213 431 TAGLTAFYMFRI 442
Cdd:MTH00151 381 GVGLTALYSARL 392
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-449 |
2.70e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 186.33 E-value: 2.70e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 8 PLPVIMSmgFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSwtinnDFSLEFG--YLIDPL 85
Cdd:PRK12667 11 ILLVLFA--FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 86 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAA 165
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 166 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNWIPNNGI---NSLLTTLCAFLLFLGAVA-KSAQFPLH 240
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsAKIRGLSFPLTGGlagNPPLALGVALALALWAFTiKAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 241 VWLPDAM-EGPTPISALIhAATMVAAGIFLLARLL--------PLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRS 311
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 312 LAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITR 388
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 405109213 389 TTFLLGTLSLCGIPPLACFWSKdEILSNSWLYS--PFFGIIASFTAGLTAFYMFRIYLLTFDG 449
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
17-440 |
9.29e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 190.64 E-value: 9.29e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 17 FGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSI-YQYLWSWTI-NNDFSLEFGYLIDPLTSIMLILIT 94
Cdd:PRK12650 10 LAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALSLFFALLAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 95 TVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFwfTRPIAASACQKAFVT 174
Cdd:PRK12650 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRTLIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 175 NRVGDFGLLLGILGFFWITGSLEFRDLFKiANNWIPNNGinslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 254
Cdd:PRK12650 168 TFFGGLTLLAAVAIAATQTGTTSLSGILH-SDVWAEKPG----LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 255 ALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS--- 331
Cdd:PRK12650 243 AFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfa 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 332 YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKD 411
Cdd:PRK12650 323 LTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
|
410 420 430
....*....|....*....|....*....|..
gi 405109213 412 EILSnSWLYSPF--FGIIA-SFTAGLTAFYMF 440
Cdd:PRK12650 394 GMLT-AFLEAPGgnAGVVLlLVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-442 |
1.21e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 175.45 E-value: 1.21e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMSMGFGLFI-IPTATKNLRRIWAF-PSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTInndfslefGYLID 83
Cdd:PRK08375 5 LLPLLVAVPLLAAALIvLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRAD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 84 PLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 163
Cdd:PRK08375 77 SLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 164 AASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnnGINSLLTTLcaFLLFLGAVAKSAQFPLHVWL 243
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 244 PDAMEGPTPISALIHAATMVAAGIFLLARLL-----PLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMS 318
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 319 QLGYMMLALGIGSY---QAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLKKYVPITRTTFLLGT 395
Cdd:PRK08375 306 QMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVAS 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 405109213 396 LSLCGIPPLACFWSKDEILS-----NSWLYSPFFgIIASFtagLTAFYMFRI 442
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVgaveaGQWLVLAVL-LASSL---LALLYFLRI 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
82-449 |
9.03e-41 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 158.90 E-value: 9.03e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 82 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFN----TSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 157
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 158 WFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANnwiPNNGINSLlttlcAFLL-FLGAVAKSAQ 236
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDF-AAMRAAH---LSPFWASL-----VFLLaLFGFGAKAGL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 237 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLLARLLPLFISLP------LIMNFislvGTITLFLGATLALAQRDIK 309
Cdd:PRK06521 227 VPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgvLVLAL----GAISAVLGVLYALAEHDLK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 310 RSLAYSTMSQLGYMMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMV 375
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDME 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 376 LMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK----DEILSNSWLYSPFFGIIA-------SFTAGLTAFYMFRIYL 444
Cdd:PRK06521 373 KLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPGLPQWGLKLAVpiaaamlALTAALAAMCFVKFYG 452
|
....*
gi 405109213 445 LTFDG 449
Cdd:PRK06521 453 ITFLG 457
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-442 |
9.54e-41 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 155.66 E-value: 9.54e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 4 IPLLPLPVIMSMGFGLFIIPTATKNLRRIWAFP-SVLLLSIALVFSVylsiqqikgssiyqylwsWTINNDFSLEFG--Y 80
Cdd:COG1007 5 LALLPEIILLLGALVLLLLDLFLPRRSRRLLAGlALLGLLLALALLL------------------LALGGGTGTAFGgmF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTS-MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 159
Cdd:COG1007 67 VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 160 TRPIAASACQKAFVTnrvGDFG---LLLGILGFFWITGSLEFRDLFKIannwIPNNGINSLLTTLcAFLLFLGAVA-KSA 235
Cdd:COG1007 147 DDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLL-GLVLVLAGLAfKLS 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 236 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLLARLL-----PLFISLPLIMNFISLvgtITLFLGATLALAQRDIK 309
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveafpGLAADWQLLLAVLAV---LSMTVGNLAALAQTNVK 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 310 RSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsVIHSMEplvgYSPDKSQNMVLMGGLKKYVPI 386
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VILLLS----RKGGEAEEIEDLAGLARRSPL 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 405109213 387 TRTTFLLGTLSLCGIPPLACFWSKDEILSNSW---LYspFFGIIASFTAGLTAFYMFRI 442
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
3-357 |
3.09e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 154.86 E-value: 3.09e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 3 VIPLLPlPVIMSMGFGLFII-PTATKNLRRIWAFPSVLLLSIALVFSVYLSIqqikgssiyqyLWSWTINNDFSLefgyl 81
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFAT-----------GAAWPAAAWLEV----- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 82 iDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTR 161
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 162 PIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnGINSLLTTLCAFLLFLGAVAKSAQFPLHV 241
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAA-----QGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 242 WLPDAMEGPTPISALIHAAtMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLG 321
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 405109213 322 YMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVI 357
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-442 |
1.52e-37 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 146.50 E-value: 1.52e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 4 IPLLPLPVIMSMGF-GLFIIPTATKNLRRIWAfpsVLLLSIALVFSVYLSIQQIKGSSIYQYLwswtinndfslefgYLI 82
Cdd:PRK05777 9 ILLLPELILLGAAVvLLLIDAFVRRHSRRATL---AVLALLLALVALLFVLGAAGGGTAFGGM--------------LVV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 83 DPLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 162
Cdd:PRK05777 72 DGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 163 IAASACQKAFVtnrVGDFG---LLLGILGFFWITGSLEFRDLFKIANNwipNNGINSLLttLCAFLLFLGAVA-KSAQFP 238
Cdd:PRK05777 151 RSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALAD---GSGNSLLL--LFGLVFLLVGLAfKLSAVP 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 239 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLLARLLPLFISLPLIM-NFISLVGTITLFLGATLALAQRDIKRSLAYST 316
Cdd:PRK05777 223 FHMWTPDVYEGaPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 317 MSQLGYMMLALGIGS---YQAALFHLITHAYSKallfLGSGSVIHSMEPLVGYSPDKSQnmvlMGGLKKYVPITRTTFLL 393
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 405109213 394 GTLSLCGIPPLACFWSKDEILSNS------WLyspffGIIASFTAGLTAFYMFRI 442
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-458 |
1.30e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 143.93 E-value: 1.30e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMsmGFGLFIIPTATKNLRRIWAFPSVLLlsiALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPL 85
Cdd:TIGR01972 4 LIFLPLIG--ALLILLLPSNKDGKARWIALVVALA---TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 86 TSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWfTRPIAA 165
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 166 SACQKAFVTNRVGDFGLLLGILGFFWITGslefrDLFKIaNNWIPNNgINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPD 245
Cdd:TIGR01972 156 YAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL-LELLNLP-LPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 246 AM-EGPTPISALIHAATMVAAGIFLLARLLPLF-----ISLPLIMNFislvGTITLFLGATLALAQRDIKRSLAYSTMSQ 319
Cdd:TIGR01972 229 AHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdaslYFAPVLAAL----GVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 320 LGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLKKYVPITRTTFLLGTL 396
Cdd:TIGR01972 305 MGFVLLGIFSFnelGISGAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAM 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 397 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNY 458
Cdd:TIGR01972 376 ASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-449 |
5.93e-36 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 142.26 E-value: 5.93e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 4 IPLLPLPVIMSMGFGLFIIPTAtKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLID 83
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTE-RFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 84 PLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWE--LVGMcsYLLIGFW--F 159
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 160 TRPIAASacqKAFVTNRVGDFGLLLGILGFFWI----TGSLEFRDLFKIAnnwIPNNGINSLlttlcaFLLFLGAVA-KS 234
Cdd:PRK05846 158 NRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLP---LPPGVQYWL------FLAFFIAFAvKM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 235 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLAR-LLPLFISLPLIMNFISLV-GTITLFLGATLALAQRDIKRSL 312
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 313 AYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRT 389
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAA 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 390 TFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 449
Cdd:PRK05846 377 FFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-442 |
1.39e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 138.03 E-value: 1.39e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 68 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWE 145
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 146 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRdlfkiannwipNNGINSLLTTLCAFL 225
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV-----------SGGLFSKNQSIILLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 226 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIM------NFISLVGTITLFLGA 299
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 300 TLALAQRDIKRSLAYSTMSQLGYMMLALGI---GSYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVL 376
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 405109213 377 MGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPFFGIIASFTAGLTAFYMFRI 442
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
74-460 |
1.64e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 138.51 E-value: 1.64e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 74 FSLEFG-YLIDPLTSIMLILITtvgILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 152
Cdd:MTH00095 37 LSLKFNfYFNSLLFSLILLLVT---LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 153 LLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFWItgSLEFRDLfkiannwipnnginSLLTTLCAFLLFLGAVA 232
Cdd:MTH00095 114 FLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFIFS--SYYFFSF--------------SFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 233 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLpLIMNFISLVGTITLFLGATLALAQRDIKRSL 312
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVV 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 313 AYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgYSPDKSQNMVLMGGLKKYVpitRTTFL 392
Cdd:MTH00095 256 ALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQLL 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 393 LGTLSLCGIPPLACFWSKDEILSNSWL--YSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSS 460
Cdd:MTH00095 328 VTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
67-410 |
1.75e-34 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 139.36 E-value: 1.75e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 67 SWTINNDFSLEFGYLIdpLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSMLGLVTSSNLIQIYFFWEL 146
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 147 VGMCSYLLIgfWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDlfkIANNWIPNNGINSLLttLCAFLL 226
Cdd:PRK08668 130 MTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQGLINDTSTGFAL--IVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 227 FLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLLARLLP---------LFISLPLIMNFISLVGTIT 294
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 295 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKS 371
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GT 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 405109213 372 QNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK 410
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
28-425 |
2.21e-34 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 139.48 E-value: 2.21e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 28 NLRRIWAFPSVL-LLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEfgylIDPLTSIMLILITTVGILVLIYSDD 106
Cdd:PRK08667 24 RHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAFFIILIGLVSLCVAIYSLG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 107 YMSHDEGYLRFFV---YISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLL 183
Cdd:PRK08667 100 YNEHMSSNERANLlsaLTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 184 LGILGFFWITGSLEFrdlfkiannwiPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATM 262
Cdd:PRK08667 180 LGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 263 VAAGIFLLARLLPLFISLPLIMNF-ISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG----------- 330
Cdd:PRK08667 248 LKVAVYGLVRFLMDVLSPELWWGVlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYvifgvygldtl 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 331 ---SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACF 407
Cdd:PRK08667 328 allALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGF 398
|
410
....*....|....*...
gi 405109213 408 WSkdEILsnswLYSPFFG 425
Cdd:PRK08667 399 AS--ELL----LYESFFQ 410
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-430 |
3.59e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.54 E-value: 3.59e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 15 MGFGLFIIPTATKNLRRIWAFpsvlllsIALVFSVYLSIQQIKGSsiyqylwsWTINNDFSLEFgyLIDPLTSIMLILIT 94
Cdd:PRK07234 15 LGFAIYLLPKLDRNLALGMAI-------VSAVYALGLVASMVPLE--------LTLLDNFGVTL--RADALSGYFILTNA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 95 TVGILVLIYSddymsHDEGYLRFFvyiSFFNTSMLGLV----TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQK 170
Cdd:PRK07234 78 LVTLAVIFYC-----WESAKTRFF---YAQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 171 AFVTNRVGDFgLLLGILGFFWITGSLEFRDLfkiannwipnnginSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGP 250
Cdd:PRK07234 150 LFYSNVAMLF-YLIGAVLVYQANGTFAFSGL--------------ATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 251 TPISALIHAATMVAAGIFLLARLLPLFISLPLImnfISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG 330
Cdd:PRK07234 215 EPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 331 syqaALFHLiTHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLKKYVPITrttflLGTLSLCGIPPLACFWSK 410
Cdd:PRK07234 292 ----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSK 352
|
410 420
....*....|....*....|....*.
gi 405109213 411 DEILSN--SW----LYSPFFGIIASF 430
Cdd:PRK07234 353 VLTLKNllPWqaiaLNLAAVGTAASF 378
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
82-436 |
1.51e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 132.20 E-value: 1.51e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 82 IDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTsmlGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 159
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 160 TRPiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnnGINSLLTTLCAFLLFLGAVAKSAQFPL 239
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAG------TIDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 240 HVWLPDAMEG-PTPISALIhAATMVAAGIFLLARLLPLFISLPLIMNFISLV---GTITLFLGATLALAQRDIKRSLAYS 315
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 316 TMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLKKYVPITRTTFL 392
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 405109213 393 LGTLSLCGIPPLACFWSKdeilsnswlyspFFGIIASFTAGLTA 436
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSK------------FRIILAGLSAGYTW 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
81-432 |
4.29e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 127.74 E-value: 4.29e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 LIDPLTSIMLILITTVGILVLIYSDDYMSHD-------EGYLRFfvYISFFNT---SMLGLVTSSNLIQIYFFWELVGMC 150
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 151 SYLLIGFWFTRPiAASACQKAFVTNRVGD----FGLLLGILGFFWITGS----LEFRDLFKIANNwipnngINSLLTTLC 222
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGDgemaILWTELLKHASL------LDPTLMKLA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 223 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAA-------GIFLLARLLPLFISlPLIMNFislvGTIT 294
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVAlyavlryYILIDAAIGSDFPG-RLLLIF----GLLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 295 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKS 371
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GT 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 405109213 372 QNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNS-----WLYSPF--FGIIASFTA 432
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILllLLLTLAFAA 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-450 |
2.21e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 125.45 E-value: 2.21e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMSMGFGLFIIptATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWtiNNDFSLEFgyLIDPL 85
Cdd:PRK07691 5 LVILPILIPVITAILLI--FLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 86 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRpIAA 165
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 166 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNWIPNNGinslLTTLCAFLLFLGAVAKSAQFPLHVWLP 244
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsVKIAELSAGQTG----LITVVAILFLFVFATKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 245 DAMEGP-TPISALIhAATMVAAGIFLLARLLPLFIS--LPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLG 321
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 322 YMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHsmepLVGYSPDKSqnmvlMGGLKKYVPITRTTFLLGTLSL 398
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 405109213 399 CGIPPLACFWSKDEILSNSWLYSPF-FGIIASFTAGLTAFYMFRIYLLTFDGY 450
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFYvSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
65-466 |
4.51e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.13 E-value: 4.51e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 65 LWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE-GYLRFFVYISFFNTSMLGLVTSSNLIQIYFF 143
Cdd:TIGR01770 51 LTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 144 WELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLlttlcA 223
Cdd:TIGR01770 131 LELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLL-----G 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 224 FLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLLARLLPLFISLPLIMNFISLVGTITLFLGAT 300
Cdd:TIGR01770 206 IVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 301 LALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFlgsgSVIHSMEplvGYSPDKSQNMVLM 377
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLR---SYKDEWIEYISDF 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 378 GGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWLYspFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVH 454
Cdd:TIGR01770 359 AGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffaLLKSGLY--WLAVIAVLTSVIGAFYYLRVVKVMYFDKPERR 436
|
410
....*....|..
gi 405109213 455 FQNYSSTKEGSL 466
Cdd:TIGR01770 437 IPSNPQSKAQSL 448
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
73-415 |
1.59e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 117.69 E-value: 1.59e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 73 DFSLEFgYLIDPLTSIMLILITTVGILVLIYSddYMSHDEG-YLRFFVYISffntSMLGLVTSSNLIQIYFFWELVGMCS 151
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 152 YLLIgfWFTR-PIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnnginsLLTTLCAFLLFLGA 230
Cdd:PRK12668 130 TFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIA--------------GLGGTAAWLILIGF 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 231 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLplimnfISLVGTITLFlGATLALAQRDIKR 310
Cdd:PRK12668 194 GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 311 SLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSmeplVGYSpdksqNMVLMGGLKKYVPIT 387
Cdd:PRK12668 267 LLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLT 337
|
330 340
....*....|....*....|....*...
gi 405109213 388 RTTFLLGTLSLCGIPPLACFWSKDEILS 415
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
82-357 |
5.29e-26 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 112.44 E-value: 5.29e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 82 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISF--FNTSMLGLvtSSNLIQIYFFWELVGMCSYLLIG--- 156
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 157 FWftRPIAASACQKAFVTNrVGDFGLLLGILGFFWITGslEFRDLFKIANNWIPNngINSLLTTLCAFLLFLGAVAKSAQ 236
Cdd:PRK08601 148 GW--KVAREAAKISGMLFL-ISWLALALAIVWLFIATG--EWQLTSVLSNENLAQ--LGTWEKTGINLLLILAVMIPAAQ 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 237 FPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLLARLLPLF-----ISLPLIMNFISLVgtitlfLGATLALAQRDIKRS 311
Cdd:PRK08601 221 WPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFhddiaQILLLIFASISVL------IGTGISLVQVDYKRQ 293
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 405109213 312 LAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVI 357
Cdd:PRK08601 294 LVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
37-447 |
4.93e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 109.58 E-value: 4.93e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQQIKGSSIYQYLWSwtiNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 116
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLS---FGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 117 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLgILGFFWITGSL 196
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 197 EFrdlfkiannwipnnginsllttLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARlLPL 276
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 277 FISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSV 356
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 357 IhsmeplVGYSPDKSQNMVLMGGLKKYVPITRTTFLLgtLSLCGIPPLACFWSKDEILSN--SWLYSPFFGIIASFTAGL 434
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 405109213 435 TAFYMFRIYLLTF 447
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-442 |
4.09e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 106.36 E-value: 4.09e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 9 LPVIMSMGFGLfiiptaTKNLRRIWAFpSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEfgylIDPLTSI 88
Cdd:PRK12662 12 IPLLSAVVCAL------LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 89 MLILITTVGILVLIYSDdYMSHDE----GYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIA 164
Cdd:PRK12662 81 MLVLVNFIAVMSVLYGI-YPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKAL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 165 ASACQkAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINsllttLCAFLLFLGAVAKSAQFPLHVWLP 244
Cdd:PRK12662 160 VAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 245 DAM-EGPTPISALIhAATMVAAGIFLLARLLP-------LFISLPLIMNFISLVGTITLFlGATLALAQRDIKRSLAYST 316
Cdd:PRK12662 234 QAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMILAALAIVF-GSVLAILSKDIKRIFAYSS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 317 MSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMVLMGGLKKYVPITRTTFLL 393
Cdd:PRK12662 312 ISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVL 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 405109213 394 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIA-SFTAGLTAFYMFRI 442
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVlLVGSGLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
6-447 |
5.78e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 106.19 E-value: 5.78e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMSMGFGLFIIptATKNLRRIWAFPSVLLLSIALVFSVYLsiqqikgssiyqyLWSWTINNDFSLEFG------ 79
Cdd:PRK12663 5 LLILPMLLPLLCGLVLV--FLRNRDRLQRYLAIGTLTILTLISLAL-------------LIYVQRHGPITLDFGgwlppf 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 80 ---YLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIG 156
Cdd:PRK12663 70 giqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 157 FWFTRPIAASACQKAFVtNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnNGINSLLTTLcAFLLFLGAVAKSAQ 236
Cdd:PRK12663 150 LGQEREQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND----MGDTATLTTI-ALLFLLAFGMKAAL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 237 FPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLLARLLP-LFISLPLIMNF-ISLVGTITLFLGATLALAQRDIKRSLA 313
Cdd:PRK12663 224 FPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAG 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 314 YSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHsmepLVGYSPDKSqnmvlMGGLKKYVPITRTT 390
Cdd:PRK12663 302 YQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGAL 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 405109213 391 FLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY-MFRIYLLTF 447
Cdd:PRK12663 373 FLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAY 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
6-438 |
3.78e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 97.48 E-value: 3.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQiKGSSIYQYL-WSWTINNDFSLEfgylIDP 84
Cdd:PRK07363 5 LLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSD-PGMQFQEYLpWNEPLGLSYSLG----VDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 85 LtSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 164
Cdd:PRK07363 80 L-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 165 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNGINSLLTtlcafLLFLGAVAKSAQFPLHVWLP 244
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDAISTQNLSLNTQLILLT-----GLLLGFGIKIPLVPLHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 245 DAMEGPTPISALIHAATMVAAGIFLLARL-LPLFI-SLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGY 322
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPqTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGY 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 323 MMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmEPLVGyspdkSQNMVLMGGLKKYV---PITRTTFLLGTL 396
Cdd:PRK07363 310 ILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAGM 380
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 405109213 397 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY 438
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
6-438 |
2.65e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 94.77 E-value: 2.65e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 6 LLPLPVIMSMGFGLFIIPTATKNLRRIwafpSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPL 85
Cdd:PRK06473 5 LIWIPLLGAILIGFWPSGINGKLARSV----ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 86 tSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPI 163
Cdd:PRK06473 81 -SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 164 AASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPnngINSLLTTLCAFLLFLGAvaKSAQFPLHVWL 243
Cdd:PRK06473 158 AAT---KFLLYTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLP---LSTQLLLLAPILVGFGI--KIPLVPFHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 244 PDA-MEGPTPISALIhAATMVAAGIFLLARL-LPLFI-SLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQL 320
Cdd:PRK06473 229 PDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 321 GYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGL---KKYVPITRTTFLLG 394
Cdd:PRK06473 308 GYILLAAAAAtplSILAAVFQMISHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILG 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 405109213 395 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY 438
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVY 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
9-447 |
4.25e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 94.05 E-value: 4.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 9 LPVIMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYqylwswtinndfslefgYLIDPLtSI 88
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 89 MLILITTVG-ILVLIYSDDYMSH-------DEGYLRFFvYISFfntSMLGLVT-----SSNLIQIYFFWELVGMCSYLLI 155
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAELTTVFSAMLI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 156 GFWFTRPIAASACQKAFVTNRVGDFGLLlGILGFFWIT------GSLEFRDLFKIANnwipnnGINSLLTTLCAFLLFLG 229
Cdd:PRK08676 143 AILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHAS------LLSPSVLGASFLFIFIG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 230 AVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLLARLLPLFIS---LPLIMNFISLVGTITLFLGATLALAQ 305
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQsgaAEQFSNVLIGLGIFSIAVAAFSMLSQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 306 RDIKRSLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGsVIHSMeplvgYSPDKSQNmvlMGGLKK 382
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFR 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 405109213 383 YVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 447
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
82-452 |
3.91e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.35 E-value: 3.91e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 82 IDPLTSIMLILITTVGILVLIYSDDYMSHDE----GYLrffvyISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGf 157
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 158 wftrpiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGInsLLTTLCAFLLFLGAVaksaqf 237
Cdd:PRK08042 132 ------NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLLAGII------ 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 238 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMNFISLV-GTITLFLGATLALAQRDIKRSLAYST 316
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 317 MSQLGYMMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSVIHSmeplVGYspdksQNMVLMGGLKK 382
Cdd:PRK08042 278 LENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 383 YVPITRTTFLLGTLSLCGIPPLACFWSKDEI------LSNSWLY-----SPFFGIIASFTAGLTAFYMFRIYLLTFDGYL 451
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLGAP 428
|
.
gi 405109213 452 R 452
Cdd:PRK08042 429 R 429
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
12-447 |
6.41e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 87.37 E-value: 6.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 12 IMSMGFGLFIIPTATKNLRRIWAFPSVLLLSIALVF-------SVYLSIQQIKgSSIYQYLWSWTINNDFSLEFGYLIDP 84
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSdqkdipwLYFISSTSLV-MSITALLFQWREEPMISFSGNFQTNN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 85 LTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFvyISFFNTSMLG---LVTSSNLIQIYFFWELVGMCSYLLIGFwftr 161
Cdd:CHL00049 80 FNEIFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY---- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 162 piaasaCQKAFVTNRVGDFGLLLG-----IL--GFFWITG-SLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAK 233
Cdd:CHL00049 154 ------TKKDVRSNEATMKYLLMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 234 SAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLLARLLPlfISLPLIMN----FISLVGTITLFLGATLALAQRDI 308
Cdd:CHL00049 228 LSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSM 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 309 KRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGyspdkSQNMVLMGGLKKYVPITR 388
Cdd:CHL00049 305 KRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLA 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 405109213 389 TTFLLGTLSLCGIPPLACFWSKDEILSNSW---LYSPFFgiIASFTAGLTAFYMFRIYLLTF 447
Cdd:CHL00049 380 LSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
43-410 |
7.37e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 87.01 E-value: 7.37e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 43 IALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIysdDYMSHDEGYlRFFVYIS 122
Cdd:PRK06277 31 LTFIVAILLPILPFLASYGYYYFGGHGLVNGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSS-GLYVFLM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 123 FFNT-SMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFgLLLGILGFFWITGSLEFRDL 201
Cdd:PRK06277 107 LMGLaSVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 202 -FKIANNwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAG--IFLLARLL 274
Cdd:PRK06277 186 hNALLVN------PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMlvIFKLFGGL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 275 PLFISLPLIMNFISLVGTItlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFL 351
Cdd:PRK06277 260 SYFPSAQGVLIALSVLAMV---FGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFL 336
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 405109213 352 GSGSVihsmeplvgYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK 410
Cdd:PRK06277 337 GAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
127-442 |
8.93e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 85.47 E-value: 8.93e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 127 SMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAN 206
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 207 NWIPNNGINSLLTTLcafLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLLarllplFISLPLIMN 285
Cdd:MTH00196 85 SGQSFSSVSVPIGYL---LIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI------LVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 286 FISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHAYSKALLFLgsgsvihsmeP 362
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS----------I 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 363 LVGYSPDKSQnMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFF-GIIASFTAGLTAFYMFR 441
Cdd:MTH00196 224 ILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYYVR 302
|
.
gi 405109213 442 I 442
Cdd:MTH00196 303 I 303
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
219-447 |
6.76e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 84.25 E-value: 6.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 219 TTLCAFLLFLGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLLARLLPLFISLPLIMNFISLVGTITLFL 297
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 298 GATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVihsmEPLVGyspdkSQNM 374
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 405109213 375 VLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL-----SNSWLysPFFGIIAS-FTAGLTAFYMFRIYLLTF 447
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGvVTSLLTLYAVARVWTKAF 434
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
37-496 |
5.83e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 80.83 E-value: 5.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 37 SVLLLSIALVFSVYLSIQQIKGSsIYQYLWSWTINNDFSLEFGYLIdplTSIMLILITTVGILVLIYSDDYMShdEGYLR 116
Cdd:MTH00199 25 STLKLSIGVLLLIGLIVELNSLN-LFQSDKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILS--EGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 117 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSL 196
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 197 EFRdlfkiANNWIPNNGINSLLTTLCafLLFLGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFllarllP 275
Cdd:MTH00199 179 SIQ-----GINSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 276 LFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHayskALLFLG 352
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 353 SGSVIHSMEPLVGYspdksqnMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL----SNSWLYSPFFGIIA 428
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILlsgvSSGYYLICIIAVLS 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 405109213 429 SFTAGLtaFYMFRIYLLTFDgylrvhfqnysstkegSLYSISLWGKSIPKEVNKDFVLStIKSGVSFF 496
Cdd:MTH00199 388 SVIAGV--YYVRVVQIIYFQ----------------ADYSILIWQKVLKKEERLDLSKS-ILIGVTFF 436
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-446 |
4.46e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 78.53 E-value: 4.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 129 LGLVTSSNLIQIYFFWELVGMCSYLLIGFWF--TRPIAASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIAN 206
Cdd:PRK12561 101 IGVFLAQDLLLFFLMWELELVPVYLLISIWGgqKRLYAAT---KFILYTALASIFILVAGLALALSGDTFTF-DLAELGA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 207 NWIPnnginsLLTTLCAFLLFLGAVA-KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL------LARL----L 274
Cdd:PRK12561 177 KSYP------LALELLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnvqmL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 275 P---LFISLPLImnfisLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSK 346
Cdd:PRK12561 244 PdahVYFAPALA-----ILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIA 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 347 ALLFLGSGsvihsmeplVGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWLYSPF 423
Cdd:PRK12561 317 AALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSST 387
|
330 340
....*....|....*....|....*..
gi 405109213 424 FGIIASFTAG----LTAfymfrIYLLT 446
Cdd:PRK12561 388 FRTITILLAAvgliLTP-----IYLLS 409
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
68-118 |
1.06e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.61 E-value: 1.06e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 405109213 68 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFF 118
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
58-410 |
7.21e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 68.15 E-value: 7.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 58 GSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSMLG---LVTS 134
Cdd:PRK02504 52 GAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILL--TATLGgmfLSGA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 135 SNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEfrDLFKIANNWIPNNGI 214
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPSL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 215 NSLLttlcAFLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLLARLLPL-FISLPLIMNFI-SLV 290
Cdd:PRK02504 208 GLAL----ALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVTaFPSFDEQWKLLfTAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 291 GTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITH------AYSKALLF-LGSGSvihsm 360
Cdd:PRK02504 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT----- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 405109213 361 EPLVGYSpdksqnmvlmgGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK 410
Cdd:PRK02504 358 DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
141-446 |
2.27e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 63.57 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 141 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI-LGFFWITGSLEFRDLfkiANNWIPNNginslLT 219
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL---AAKDFGLG-----FQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 220 TLCAFLLFLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLL---ARLLP----LFISLPLIMnfislvG 291
Cdd:PRK02546 213 LLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLrmnAGMLPdahaQFAPLLIVL------G 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 292 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSKALLFLgsgsvihsmepLVGY 366
Cdd:PRK02546 287 VVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGA 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 367 SPDKSQNMVL--MGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGLTAFyMFR 441
Cdd:PRK02546 354 TYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAVGVI-LTP 432
|
....*
gi 405109213 442 IYLLT 446
Cdd:PRK02546 433 IYLLS 437
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
129-499 |
2.39e-10 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 63.43 E-value: 2.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 129 LGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTnRVGDFGLLLGILGF-FWITG--SLEFRDLfkiA 205
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLGMgLYGSNepTLNFETL---A 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 206 NNWIPnnginsLLTTLCAFLLFLGAVA-KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFL------LAR----L 273
Cdd:CHL00011 202 NQSYP------VALEILFYIGFLIAYAvKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRinmeL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 274 LP--LFISLPLIMnfisLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSY-----QAALFHLITHAYSK 346
Cdd:CHL00011 269 LPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIG 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 347 ALLFlgsgsvihsmePLVGYSPDKSQNMVL--MGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI---LSNSWLYS 421
Cdd:CHL00011 343 AALF-----------FLAGTSYDRIRLVYLdeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYL 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 422 PFFGIIASFTAG----LTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGS---LYSISLWGKSIPKEVNKDFVLSTIKSGVS 494
Cdd:CHL00011 412 LMPKILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPrelFISICILLPVIGIGIYPDFVLSLSVDKVE 491
|
....*
gi 405109213 495 FFSQN 499
Cdd:CHL00011 492 AILSN 496
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
19-459 |
8.41e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 61.49 E-value: 8.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 19 LFIIPTATKNLRRIWAFPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSwtinndfslefgylIDPLTSIMLILITTVGI 98
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLS--------------YDPLSSPLVILSCWLLP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 99 LVLIYSDDYMsHDEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTN 175
Cdd:MTH00206 74 LMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 176 RVGDFGLLLGILgffWITGSLEFRDLFkiannWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpis 254
Cdd:MTH00206 153 LIGSLPLLIALL---FLQNSLGSLSLY-----ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 255 alihAATMVAAGIFL------LARLLPLFI-SLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL 327
Cdd:MTH00206 222 ----AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 328 GIGS---YQAALFHLITHAY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPP 403
Cdd:MTH00206 298 LSGSpwgFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 405109213 404 LACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYS 459
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
233-442 |
1.18e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.41 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 233 KSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLLarLLPLFISLPLIMNfislVGTITLFLGATLALAQRDIKRS 311
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALI--AIIPKFTVYIL--LTSLVITSKLLLS----VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 312 LAYSTMSQLGYMMLALGIGSYQaALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGG------------ 379
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 405109213 380 LKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNS-----------WLYSPFFGIIASFtagLTAFYMFRI 442
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiafssslsiYYLVALFAIICTC---ISAFYYIRI 533
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
136-440 |
1.79e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.71 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 136 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWIPNNGIN 215
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL--ASCSHVVSEQTQ 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 216 SLLttlcaFL-LFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLLARLLPLfisLPL----IMNFISL 289
Cdd:MTH00226 230 KWI-----FLgIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPI---LPLgaqnLAPAVIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 290 VGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLgsgsvihsmepLVGY 366
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI-----------LVTI 370
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 405109213 367 SPDKSQNMVL--MGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMF 440
Cdd:MTH00226 371 LYDRHHTRLIkyYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-415 |
2.71e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 60.25 E-value: 2.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 223 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLLARLLPLFIS--LPLIMNFISLV----GTITL 295
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFGpeAGASAGFGQDWllpgGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 296 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFL----------GSGSVIHSMEP 362
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPE 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 405109213 363 LvgYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILS 415
Cdd:PRK12666 371 L--YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQ 421
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
87-404 |
3.45e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.80 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 87 SIMLILITTVGILVLIYSDDYmSHDEGYLRffvyiSFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGfwftrpI 163
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 164 AASACQKAFVTNRVGDFGLLLGILGFFW---ITGSLEFrdlfkiannwipnngiNSLLTTLCAFLLFLGAVAKSAQFPLH 240
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 241 V--WLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPL--IMNFISLVGTITLFLGATLALAQRDIKRSLAYST 316
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 317 MSQLGYMMLALG--IGSYQ-----------AALFHLITHAYSKALLFLGSGSVIHSMeplVGYSPDKSQNMVLMGGlkky 383
Cdd:PRK06459 259 IENNGAILVALGlyMVTKQlitsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQS---ITYSKKIRNRWIELGL---- 331
|
330 340
....*....|....*....|.
gi 405109213 384 vpitrttfLLGTLSLCGIPPL 404
Cdd:PRK06459 332 --------TLLASSLSGLLPN 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
132-478 |
3.68e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 58.83 E-value: 3.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 132 VTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLefrdlfkiannwipn 211
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW--------------- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 212 nGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLfislpLIMNFISLVG 291
Cdd:MTH00200 85 -GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 292 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLgsgsvihsmeplvgYSPDKS 371
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 372 QNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMfriylltfdgYL 451
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF----------YL 294
|
330 340
....*....|....*....|....*..
gi 405109213 452 RVHFQNYSSTKEGSLYSISLWGKSIPK 478
Cdd:MTH00200 295 RLSYLTLLTLSPNQINMMSSWRTKSNS 321
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
35-449 |
4.41e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 59.37 E-value: 4.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 35 FPSVLLLSIALVFSVY-----LSIQQIKGSSIYQYLWSWTINNDFSLEFgYLIDPLTSIMLILITTVGILVLIYSDDYMS 109
Cdd:MTH00014 6 MPLISLLLLPLIKYPWswaltFSTLLLLSLFTLLNLYPMSAPYSMFTES-LSSDMLSAPLITLTLWITALMILASFKIFQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 110 HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGF 189
Cdd:MTH00014 85 NNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 190 FWITGSLEfrdlFKIANNWIPNNginsLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIF 268
Cdd:MTH00014 165 FYTNNSLS----MLMSSMEPPSI----YLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGIL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 269 L------LARLLPLF------ISLPLIMnfISLVGTITLFLgatLALAQRDIKRSLAYSTMSQLGYM---MLALGIGSYQ 333
Cdd:MTH00014 230 LklggygLLRMSSLFmhinksLSAPFSS--ISLVGAVITSL---ICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQ 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 334 AALFHLITHAYSKALLFlgsgsVIHSMEplvgYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEI 413
Cdd:MTH00014 305 GALAMMIAHGLCSSALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIML 375
|
410 420 430
....*....|....*....|....*....|....*.
gi 405109213 414 LSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 449
Cdd:MTH00014 376 LTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
81-454 |
3.25e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 56.46 E-value: 3.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 81 LIDPLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYIS---FFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 157
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLK-NEPINRQRTYISmliILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 158 WF--TRPIAASAcQKAFVTnRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNGINSLLTTLC--AFLLflgavaK 233
Cdd:MTH00068 136 WGnqEERLNAGT-YFLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLACllAFMV------K 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 234 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL----------LARLLPLFISLPLIMNFISLVGTItlfLGATLA 302
Cdd:MTH00068 207 MPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilriSILLTPLSKELSYPFIILALWGVL---MTSLIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 303 LAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAY-SKALLFLGSGSvihsmeplvgYSPDKSQNMVLMG 378
Cdd:MTH00068 277 LRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLR 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 405109213 379 GLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVH 454
Cdd:MTH00068 347 GAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
67-443 |
5.25e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 55.84 E-value: 5.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 67 SWTINNDFSLEFGYLIDPLTSIML------ILITTVGILVLIYSDDYMshdegYLRFFVYISFFNTSMLGLVTSSNLIQI 140
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLffilltTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 141 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwIPNNginsllTT 220
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLS------IQ 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 221 LCAFL-LFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMN-FISLVGTITLFL 297
Cdd:MTH00204 209 KWLLVgFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIY 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 298 GATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNM 374
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLI 359
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 405109213 375 VLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIY 443
Cdd:MTH00204 360 KYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-325 |
7.23e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 55.17 E-value: 7.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 80 YLIDPLTSIMLILITTVGILVLIYSDD--------YMSHDEGYLrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 151
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 152 YLLIGFWfTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAV 231
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHT-----NSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 232 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLP----LIMNFISLVGTITLFLGATLALAQRD 307
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYEtiktAITNFIRPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 405109213 308 IKRSLAYSTMSQLGYMML 325
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
128-459 |
8.27e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 55.44 E-value: 8.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 128 MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnn 207
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 208 wipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAmegptpisaliHAATMVAAGIFLLARLLPL----FI--SLP 281
Cdd:MTH00217 200 ------IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA-----------HVEAPVAGSVILAGVLLKLggygFIrfSWP 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 282 LIMN----FISLVGTITLF---LGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFL 351
Cdd:MTH00217 263 LLPEaseyFSPLIQTLSLLaiiYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQglvAAIFLMLAHGLVSSALFI 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 352 GSGSVIHSMEP-LVGYSPDKSQNMVLMGGLkkyvpitrttFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASF 430
Cdd:MTH00217 343 AVTFLYERHHTrLIKYYRGMVITMPLFGIL----------MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASL 412
|
330 340
....*....|....*....|....*....
gi 405109213 431 TAGLTAFYmfRIYLltfdgYLRVHFQNYS 459
Cdd:MTH00217 413 GMVLSAGY--SIYL-----YNRVCFGAPS 434
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
33-457 |
1.16e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 54.96 E-value: 1.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 33 WAFPSVLLLS--IALVFSVYLSIQQIKGssiyqylwsWTINNDFslefgYLIDPLTSIMLILITTVGILVLIYSDDYMSH 110
Cdd:MTH00127 22 WLWTTTLAHSllIALASLTWLKNLSETG---------WSSLNLY-----MATDPLSTPLLVLTCWLLPLMILASQNHTAP 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 111 dEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGIL 187
Cdd:MTH00127 88 -EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 188 GFFWITGSLEFRDLfKIANNWIPNNGINSLLTTLC--AFLLflgavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 265
Cdd:MTH00127 167 LLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 266 GIFLLARLLPLFISLP--LIMNFISLvGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLI 340
Cdd:MTH00127 240 GGYGMMRMMVMLDPLTkeLSYPFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQtpwGFTGALILMI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 341 THAYSKALLFLGSGSvihsmeplvGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLY 420
Cdd:MTH00127 319 AHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNW 389
|
410 420 430
....*....|....*....|....*....|....*..
gi 405109213 421 SPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQN 457
Cdd:MTH00127 390 SPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
215-460 |
1.53e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 50.65 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 215 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarllPLFISLPLIMNFISLVGTIT 294
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 295 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNM 374
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 375 VLMGGLkkyvpitrttfllgtLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTA--FYMFRIYLLTFDGYLR 452
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
....*...
gi 405109213 453 VHFQNYSS 460
Cdd:MTH00144 300 KKSNSSKV 307
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
117-442 |
5.12e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 49.16 E-value: 5.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 117 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT-RPIAASAcqKAFVTNRVGDFGLLLGILGFFWITGS 195
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSpRSVEATI--KYFLVQAFSAAILLNGALIQAWLSGS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 196 LEfrdlfkiannwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarllp 275
Cdd:MTH00041 84 WS----------------INGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILL----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 276 LFISLPLIMNFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGS 355
Cdd:MTH00041 143 ISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNF 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 356 VIHSMEPLvgyspdksqnmvlmGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK-----DEILSNSWLYSPFFgIIASF 430
Cdd:MTH00041 223 SLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIIL-IIGSL 287
|
330
....*....|..
gi 405109213 431 tagLTAFYMFRI 442
Cdd:MTH00041 288 ---LSLFFYLRI 296
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
211-414 |
8.95e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 48.28 E-value: 8.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 211 NNGINSLLTTLcAFLLFLGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarllpLFISLPLIMNFISLV 290
Cdd:MTH00112 90 TNPTSCTLLTL-ALAMKLGLA------PFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTL 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 291 GTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgsVIHSMeplvgyspdK 370
Cdd:MTH00112 158 AILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------S 223
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 405109213 371 SQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL 414
Cdd:MTH00112 224 TKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLIL 267
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
134-440 |
4.77e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 46.37 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 134 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrdLFKianNWIPNNG 213
Cdd:MTH00150 74 VSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM--LLI---SSLRKLL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 214 INSLLTTLCAFLLFLgavAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLLPLFISLPliMNF 286
Cdd:MTH00150 149 SSMGLWGLLVFLAFL---VKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 287 ISLVGTITL---FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsvihsm 360
Cdd:MTH00150 217 SIFLISLSLwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLFC--------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 361 epLVGYSPDKSQ--NMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGII---ASFTAGLT 435
Cdd:MTH00150 288 --LANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPlglMVFLSGLY 365
|
....*
gi 405109213 436 AFYMF 440
Cdd:MTH00150 366 SLYLY 370
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
33-463 |
8.18e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 45.74 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 33 WAFPSVLLLSIALVFSVYLSIQQIkgsSIYQYLWSWTINNdfsLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE 112
Cdd:MTH00044 16 WIVPKNKLWPISISQSSLISLLSL---FLLNNHWSSSWHN---LSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 113 GYLR--FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFF 190
Cdd:MTH00044 90 PNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 191 WITGSLEFrdlfkIANNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFL 269
Cdd:MTH00044 170 SSSSSLSI-----PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 270 LARLLPLFiSLPLiMNFISLVGTITLFLGATLA----LAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITH 342
Cdd:MTH00044 244 LIRLINLF-SLPS-ANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILMIAH 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 343 AY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEILSNSWLYS 421
Cdd:MTH00044 322 GLvSSALFCLAN----------ILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWS 391
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 405109213 422 PFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKE 463
Cdd:MTH00044 392 ILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISS 433
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
71-403 |
1.01e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 45.27 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 71 NNDFSLEFgyLIDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELV 147
Cdd:MTH00110 49 SLNFSLLF--FSDSLSTPLLILTTWLLPLMLMASQHHLSK-EPLTRKKLYITMLILLQLFLImtfTATELIMFYILFEAT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 148 GMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRdLFKIANNWIPNNGINSLLTTLC--AFL 225
Cdd:MTH00110 126 LIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNNLLWLACmmAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 226 LflgavaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLLPL------FISLPLIMnfISLVGT 292
Cdd:MTH00110 205 V------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 293 ItlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSvihsmeplvGYSPD 369
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350
....*....|....*....|....*....|....
gi 405109213 370 KSQNMVLMGGLKKYVPITRTTFLLGTLSLCGIPP 403
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
214-414 |
1.17e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.91 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 214 INSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarllpLFISLPLIMNFISLVGTI 293
Cdd:MTH00070 86 IMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALL-----IQISHLLNSNLLIIMGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 294 TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgSVIHSMeplvgyspdkSQN 373
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------STN 226
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 405109213 374 MVLMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSKDEIL 414
Cdd:MTH00070 227 INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
215-447 |
5.09e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 42.74 E-value: 5.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 215 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLplimnfiSLVGTIT 294
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGL-------LICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 295 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNM 374
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 405109213 375 VLmgglkkyvpitrttFLLGTLSLCGIPPLACFWSKDEILSN-SWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 447
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSL 286
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
216-410 |
1.14e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 216 SLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLfislpLIMNFISLVGTITL 295
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 296 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALgIGSYQAALFHLITHAYSKALLFLgsgsvihsmepLVGYSPDKSQNMv 375
Cdd:MTH00011 159 LAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLML-----------LFAYLNAFSTKF- 225
|
170 180 190
....*....|....*....|....*....|....*
gi 405109213 376 lMGGLKKYVPITRTTFLLGTLSLCGIPPLACFWSK 410
Cdd:MTH00011 226 -NSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
75-380 |
1.66e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 41.50 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 75 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 154
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 155 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnginSLLTTLCAFLLFLGAVAKS 234
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS--------DFYLFLYWIFLMLAFLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 235 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLLPLFISLplIMNFISLVGTITLFLGATLA---LA 304
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKL--NSNFSELFFSISLWGGVMTGmicLR 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 305 QRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMGGL 380
Cdd:MTH00205 271 QVDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFALAN----------VNYERTNSRSMLMNKGV 340
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
215-416 |
1.92e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.25 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 215 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIFLLarllplFISLPLImnfISLVGT 292
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLLL------FFSGEEI---LLFLGI 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 293 ITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS-----YQAALFHLITHAYSKALLFLGSGSVIHSmeplvgys 367
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR-------- 281
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 405109213 368 pDKSQNMVLMGGLKKyVPITRTTFLLGTLSLCGIPPLACFWSKDEILSN 416
Cdd:PRK12664 282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHS 328
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
35-332 |
6.38e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 39.75 E-value: 6.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 35 FPSVLLLSIALVFSVYLSIQQIKGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITT-VGILVLIYSDDYMSHDEG 113
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFwICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 114 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWIT 193
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 405109213 194 GSLEFrdlfkianNWIPNNGINSLLTTLCAFLLFLgavAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLLAR 272
Cdd:MTH00163 166 GSLSF--------FLLNFFGSLNFLWYLSMILAFL---VKMPMFFVHLWLPKAhVEAPVSGS-MILAGVLLKLGGYGLLR 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 405109213 273 LLPLFISLPLIMNF----ISLVGTITLFLgatLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY 332
Cdd:MTH00163 234 VMSFFSKLGLKFNYiwisISLVGGVIVSL---ICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSY 294
|
|
| |
