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Conserved domains on  [gi|119597170|gb|EAW76764|]
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paraoxonase 2, isoform CRA_b [Homo sapiens]

Protein Classification

strictosidine synthase family protein( domain architecture ID 10484254)

strictosidine synthase family protein with similarity to strictosidine synthase that catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Arylesterase pfam01731
Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1. ...
 176-261 6.35e-49

Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1.2. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity. Human arylesterase (PON1) is associated with HDL and may protect against LDL oxidation.


:

Pssm-ID: 334656  Cd Length: 86  Bit Score: 159.55  E-value: 6.35e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170  176 NDITAVGPAHFYATNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADILAHEIHV 255
Cdd:pfam01731   1 NDIVAVGPDSFYATNDHYFGDPFLQNLEMYLGLIWTGVVYYSPSEVKVVASGFSFANGINYSPDKKYIYVASSLRHSIHV 80


                  ....*.
gi 119597170  256 LEKHTN 261
Cdd:pfam01731  81 MKKHAN 86
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
219-306 3.36e-04

DNA-binding beta-propeller fold protein YncE [General function prediction only];


:

Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 41.60  E-value: 3.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170 219 NEVKVVAEGfDSANGINISPDDKYIYVADILAHEIHVLekhtnmnltqlkVLELDT----LVDNLSIDPSSGDIWVgcHP 294
Cdd:COG3391  143 KVVATIPVG-AGPHGIAVDPDGKRLYVANSGSNTVSVI------------VSVIDTatgkVVATIPVGGGPVGVAV--SP 207

                         90
                 ....*....|..
gi 119597170 295 NGQKLFVYDPNN 306
Cdd:COG3391  208 DGRRLYVANRGS 219
 
Name Accession Description Interval E-value
Arylesterase pfam01731
Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1. ...
 176-261 6.35e-49

Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1.2. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity. Human arylesterase (PON1) is associated with HDL and may protect against LDL oxidation.


Pssm-ID: 334656  Cd Length: 86  Bit Score: 159.55  E-value: 6.35e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170  176 NDITAVGPAHFYATNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADILAHEIHV 255
Cdd:pfam01731   1 NDIVAVGPDSFYATNDHYFGDPFLQNLEMYLGLIWTGVVYYSPSEVKVVASGFSFANGINYSPDKKYIYVASSLRHSIHV 80


                  ....*.
gi 119597170  256 LEKHTN 261
Cdd:pfam01731  81 MKKHAN 86
YvrE COG3386
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ...
 174-305 5.60e-12

Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 442613 [Multi-domain]  Cd Length: 266  Bit Score: 65.30  E-value: 5.60e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170 174 SVNDItAVGPA-HFYATNDHYFSDPflkyletylnlhwANVVYYSPN-EVKVVAEGFDSANGINISPDDKYIYVADILAH 251
Cdd:COG3386   94 RPNDG-VVDPDgRLYFTDMGEYLPT-------------GALYRVDPDgSLRVLADGLTFPNGIAFSPDGRTLYVADTGAG 159

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 119597170 252 EIHVLEKHTNMNLTQLKVL----ELDTLVDNLSIDpSSGDIWVgCHPNGQKLFVYDPN 305
Cdd:COG3386  160 RIYRFDLDADGTLGNRRVFadlpDGPGGPDGLAVD-ADGNLWV-ALWGGGGVVRFDPD 215
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
219-306 3.36e-04

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 41.60  E-value: 3.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170 219 NEVKVVAEGfDSANGINISPDDKYIYVADILAHEIHVLekhtnmnltqlkVLELDT----LVDNLSIDPSSGDIWVgcHP 294
Cdd:COG3391  143 KVVATIPVG-AGPHGIAVDPDGKRLYVANSGSNTVSVI------------VSVIDTatgkVVATIPVGGGPVGVAV--SP 207

                         90
                 ....*....|..
gi 119597170 295 NGQKLFVYDPNN 306
Cdd:COG3391  208 DGRRLYVANRGS 219
NHL_like_6 cd14962
Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) ...
 213-258 5.21e-03

Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.


Pssm-ID: 271332 [Multi-domain]  Cd Length: 271  Bit Score: 38.34  E-value: 5.21e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 119597170 213 VVYYSPNEVKV----VAEGFDSANGINISPDDKYIYVADILAHEIHVLEK 258
Cdd:cd14962   80 VFVFDRDGKFLraigAGALFKRPTGIAVDPAGKRLYVVDTLAHKVKVFDL 129
 
Name Accession Description Interval E-value
Arylesterase pfam01731
Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1. ...
 176-261 6.35e-49

Arylesterase; This family consists of arylesterases (Also known as serum paraoxonase) EC:3.1.1.2. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity. Human arylesterase (PON1) is associated with HDL and may protect against LDL oxidation.


Pssm-ID: 334656  Cd Length: 86  Bit Score: 159.55  E-value: 6.35e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170  176 NDITAVGPAHFYATNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADILAHEIHV 255
Cdd:pfam01731   1 NDIVAVGPDSFYATNDHYFGDPFLQNLEMYLGLIWTGVVYYSPSEVKVVASGFSFANGINYSPDKKYIYVASSLRHSIHV 80


                  ....*.
gi 119597170  256 LEKHTN 261
Cdd:pfam01731  81 MKKHAN 86
YvrE COG3386
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ...
 174-305 5.60e-12

Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 442613 [Multi-domain]  Cd Length: 266  Bit Score: 65.30  E-value: 5.60e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170 174 SVNDItAVGPA-HFYATNDHYFSDPflkyletylnlhwANVVYYSPN-EVKVVAEGFDSANGINISPDDKYIYVADILAH 251
Cdd:COG3386   94 RPNDG-VVDPDgRLYFTDMGEYLPT-------------GALYRVDPDgSLRVLADGLTFPNGIAFSPDGRTLYVADTGAG 159

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 119597170 252 EIHVLEKHTNMNLTQLKVL----ELDTLVDNLSIDpSSGDIWVgCHPNGQKLFVYDPN 305
Cdd:COG3386  160 RIYRFDLDADGTLGNRRVFadlpDGPGGPDGLAVD-ADGNLWV-ALWGGGGVVRFDPD 215
SGL pfam08450
SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in ...
 176-305 3.58e-06

SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.


Pssm-ID: 462480 [Multi-domain]  Cd Length: 246  Bit Score: 47.64  E-value: 3.58e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170  176 NDItAVGPA-HFYATNDHYFSDPflkyletylNLHWANVVYYSPN-EVKVVAEGFDSANGINISPDDKYIYVADILAHEI 253
Cdd:pfam08450  89 NDG-KVDPDgRFWFGTMGDDEAP---------GGDPGALYRLDPDgKLTRVLDGLTISNGLAWSPDGRTLYFADSPARKI 158

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 119597170  254 HVLE-KHTNMNLTQLKVL----ELDTLVDNLSIDpSSGDIWVgCHPNGQKLFVYDPN 305
Cdd:pfam08450 159 WAYDyDLDGGLISNRRVFadfkPGLGRPDGMAVD-AEGNVWV-ARWGGGKVVRFDPD 213
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
219-306 3.36e-04

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 41.60  E-value: 3.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119597170 219 NEVKVVAEGfDSANGINISPDDKYIYVADILAHEIHVLekhtnmnltqlkVLELDT----LVDNLSIDPSSGDIWVgcHP 294
Cdd:COG3391  143 KVVATIPVG-AGPHGIAVDPDGKRLYVANSGSNTVSVI------------VSVIDTatgkVVATIPVGGGPVGVAV--SP 207

                         90
                 ....*....|..
gi 119597170 295 NGQKLFVYDPNN 306
Cdd:COG3391  208 DGRRLYVANRGS 219
NHL_like_6 cd14962
Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) ...
 213-258 5.21e-03

Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.


Pssm-ID: 271332 [Multi-domain]  Cd Length: 271  Bit Score: 38.34  E-value: 5.21e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 119597170 213 VVYYSPNEVKV----VAEGFDSANGINISPDDKYIYVADILAHEIHVLEK 258
Cdd:cd14962   80 VFVFDRDGKFLraigAGALFKRPTGIAVDPAGKRLYVVDTLAHKVKVFDL 129
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
221-297 5.71e-03

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 37.75  E-value: 5.71e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119597170 221 VKVVAEGfDSANGINISPDDKYIYVADILAHEIHVLEKHTNmnlTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQ 297
Cdd:COG3391  103 VATIPVG-GGPRGLAVDPDGGRLYVADSGNGRVSVIDTATG---KVVATIPVGAGPHGIAVDPDGKRLYVANSGSNT 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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