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Conserved domains on  [gi|119603287|gb|EAW82881|]
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metallothionein 1F (functional) [Homo sapiens]

Protein Classification

Metallothio domain-containing protein( domain architecture ID 10444442)

Metallothio domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Metallothio pfam00131
Metallothionein;
4-60 3.40e-06

Metallothionein;


:

Pssm-ID: 395080  Cd Length: 65  Bit Score: 39.48  E-value: 3.40e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 119603287   4 NCSCAAGVSCTCAGSCKCKECKCTSCKKSCCSCCPVGCSKCAQGCVCKGA---SEKCSCC 60
Cdd:pfam00131  5 TCPCATGGTCTCSDSCKCTGCKCTSCKKSCCSCCPPGCAKCAQGCICKGGcsgPEKCSCC 64
 
Name Accession Description Interval E-value
Metallothio pfam00131
Metallothionein;
4-60 3.40e-06

Metallothionein;


Pssm-ID: 395080  Cd Length: 65  Bit Score: 39.48  E-value: 3.40e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 119603287   4 NCSCAAGVSCTCAGSCKCKECKCTSCKKSCCSCCPVGCSKCAQGCVCKGA---SEKCSCC 60
Cdd:pfam00131  5 TCPCATGGTCTCSDSCKCTGCKCTSCKKSCCSCCPPGCAKCAQGCICKGGcsgPEKCSCC 64
 
Name Accession Description Interval E-value
Metallothio pfam00131
Metallothionein;
4-60 3.40e-06

Metallothionein;


Pssm-ID: 395080  Cd Length: 65  Bit Score: 39.48  E-value: 3.40e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 119603287   4 NCSCAAGVSCTCAGSCKCKECKCTSCKKSCCSCCPVGCSKCAQGCVCKGA---SEKCSCC 60
Cdd:pfam00131  5 TCPCATGGTCTCSDSCKCTGCKCTSCKKSCCSCCPPGCAKCAQGCICKGGcsgPEKCSCC 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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