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Conserved domains on  [gi|256012817|gb|EEU04043|]
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B_lectin domain-containing protein [Dictyostelium discoideum AX4]

Protein Classification

G-type lectin S-receptor-like serine/threonine-protein kinase family protein( domain architecture ID 1903669)

G-type lectin S-receptor-like serine/threonine-protein kinase is involved in the abiotic stress response, allowing the plant to adapt to continuously changing environmental factors; contains a highly conserved serine/threonine protein kinase catalytic domain and a G-type lectin region

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
B_lectin super family cl42953
Bulb-type mannose-specific lectin;
12-126 5.44e-14

Bulb-type mannose-specific lectin;


The actual alignment was detected with superfamily member smart00108:

Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 63.48  E-value: 5.44e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256012817    12 QSDDNNNYRLVSHNKRYEAC-----MQGDGNFVIYSlvnnsSDSRRVIYATNTCHKGSGPYKFYCQADGNMVVYSKDNHP 86
Cdd:smart00108   1 SNTLSSGQTLVSGNSLFELGfftliMQNDYNLILYK-----SSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRV 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 256012817    87 SWSSNTcnkhTHRPGPYHCRLYDSGSLKAYDGNNSIMWSS 126
Cdd:smart00108  76 VWSSNT----TGANGNYVLVLLDDGNLVIYDSDGNFLWQS 111
 
Name Accession Description Interval E-value
B_lectin smart00108
Bulb-type mannose-specific lectin;
12-126 5.44e-14

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 63.48  E-value: 5.44e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256012817    12 QSDDNNNYRLVSHNKRYEAC-----MQGDGNFVIYSlvnnsSDSRRVIYATNTCHKGSGPYKFYCQADGNMVVYSKDNHP 86
Cdd:smart00108   1 SNTLSSGQTLVSGNSLFELGfftliMQNDYNLILYK-----SSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRV 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 256012817    87 SWSSNTcnkhTHRPGPYHCRLYDSGSLKAYDGNNSIMWSS 126
Cdd:smart00108  76 VWSSNT----TGANGNYVLVLLDDGNLVIYDSDGNFLWQS 111
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 16-126 4.49e-12

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 58.48  E-value: 4.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256012817  16 NNNYRLVSHNKRYEAC-----MQ-GDGNFVIYSlvnnsSDSRRVIYATNTCHKGSGPYKFYCQADGNMVVYSKDNHPSWS 89
Cdd:cd00028    5 SSGQTLVSSGSLFELGffkliMQsRDYNLILYK-----GSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 256012817  90 SNTcnkhTHRPGPYHCRLYDSGSLKAYDGNNSIMWSS 126
Cdd:cd00028   80 SNT----TRVNGNYVLVLLDDGNLVLYDSDGNFLWQS 112
 
Name Accession Description Interval E-value
B_lectin smart00108
Bulb-type mannose-specific lectin;
12-126 5.44e-14

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 63.48  E-value: 5.44e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256012817    12 QSDDNNNYRLVSHNKRYEAC-----MQGDGNFVIYSlvnnsSDSRRVIYATNTCHKGSGPYKFYCQADGNMVVYSKDNHP 86
Cdd:smart00108   1 SNTLSSGQTLVSGNSLFELGfftliMQNDYNLILYK-----SSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRV 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 256012817    87 SWSSNTcnkhTHRPGPYHCRLYDSGSLKAYDGNNSIMWSS 126
Cdd:smart00108  76 VWSSNT----TGANGNYVLVLLDDGNLVIYDSDGNFLWQS 111
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 16-126 4.49e-12

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 58.48  E-value: 4.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256012817  16 NNNYRLVSHNKRYEAC-----MQ-GDGNFVIYSlvnnsSDSRRVIYATNTCHKGSGPYKFYCQADGNMVVYSKDNHPSWS 89
Cdd:cd00028    5 SSGQTLVSSGSLFELGffkliMQsRDYNLILYK-----GSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 256012817  90 SNTcnkhTHRPGPYHCRLYDSGSLKAYDGNNSIMWSS 126
Cdd:cd00028   80 SNT----TRVNGNYVLVLLDDGNLVLYDSDGNFLWQS 112
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 32-93 4.13e-07

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 45.38  E-value: 4.13e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 256012817  32 MQGDGNFVIYSLvnnssdSRRVIYATNTcHKGSGPYKFYCQADGNMVVYSKDNHPSWSSNTC 93
Cdd:cd00028   61 LQSDGNLVIYDG------SGTVVWSSNT-TRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDY 115
B_lectin smart00108
Bulb-type mannose-specific lectin;
32-92 7.94e-07

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 44.61  E-value: 7.94e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 256012817    32 MQGDGNFVIYSlvnnssDSRRVIYATNTcHKGSGPYKFYCQADGNMVVYSKDNHPSWSSNT 92
Cdd:smart00108  60 LQSDGNLVLYD------GDGRVVWSSNT-TGANGNYVLVLLDDGNLVIYDSDGNFLWQSFD 113
B_lectin smart00108
Bulb-type mannose-specific lectin;
65-134 8.88e-04

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 36.52  E-value: 8.88e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 256012817    65 GPYKFYCQADGNMVVYSKDNH-PSWSSNTCNkhthrPGPYHCRL--YDSGSLKAYDGNNSIMWSSPIDSQLGH 134
Cdd:smart00108  20 GFFTLIMQNDYNLILYKSSSRtVVWVANRDN-----PVSDSCTLtlQSDGNLVLYDGDGRVVWSSNTTGANGN 87
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 65-135 4.69e-03

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 34.60  E-value: 4.69e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 256012817  65 GPYKFYCQ-ADGNMVVYSKDNH-PSWSSNTCNkhthrPGPYHCRLY--DSGSLKAYDGNNSIMWSSPIDSQLGHC 135
Cdd:cd00028   20 GFFKLIMQsRDYNLILYKGSSRtVVWVANRDN-----PSGSSCTLTlqSDGNLVIYDGSGTVVWSSNTTRVNGNY 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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