NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2287478709|ref|NP_001397840|]
View 

cyclic GMP-AMP synthase isoform 2 [Homo sapiens]

Protein Classification

Mab-21 family protein( domain architecture ID 10505530)

Mab-21 family protein, similar to Caenorhabditis elegans Mab-21 (Protein male abnormal 21) which acts in a cell autonomous fashion to specify the properties of the sensory ray and non-autonomously in the choice of hypodermal versus neuroblast cell fate

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 214-389 1.20e-62

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


:

Pssm-ID: 460873  Cd Length: 191  Bit Score: 202.66  E-value: 1.20e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 214 YYEHVKISAPNEFDVMFKLEVPRIQLEEYSNTRAYYFVKFKR--------NPKENPLSQFLEGEI---LSASKMLSKFRK 282
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGVPGYVVLKLTRwryylhnpVGRPESLSQWLEFTAegyLSAAKVLSRFQS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 283 IIKEEINDIKD--TDVIMKRKRGGsPAVTLLISE---KISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPF 357
Cdd:pfam03281  81 LVEKALNTVNDsiYGLVYKREKGG-PAVTLAIETsedQYSVDLVPAIECPGIWPKSARWPRCLKRWPSQKVLRKIKSEGF 159

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2287478709 358 YLVPKHAKEGNGFQEETWRLSFSHIEKEILNN 389
Cdd:pfam03281 160 HLVAKSSPWPSSDENYSWRLSFSQAEKVLLKG 191
Mab-21_C super family cl48430
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 405-444 7.00e-12

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


The actual alignment was detected with superfamily member pfam20266:

Pssm-ID: 466416  Cd Length: 102  Bit Score: 61.87  E-value: 7.00e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2287478709 405 CRKDCLKLMKYLLEQLKerFKDKKHLDKFSSYHVKTAFFH 444
Cdd:pfam20266   1 CRKKCLRILKKLKEPGK--RDVKTELSKICSYHLKTLFLW 38
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 15-189 1.33e-08

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 57.30  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  15 AGATAPKASARNARGAPMDPTESPAAPEAALPkagkfGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPS 94
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAA-----AAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPS 463

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  95 dATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPglpvsapilvrRDAAPgasKLRAVLEKLKL 174
Cdd:PRK07764  464 -AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL-----------RERWP---EILAAVPKRSR 528

                         170
                  ....*....|....*
gi 2287478709 175 SRDDISTAAGMVKGV 189
Cdd:PRK07764  529 KTWAILLPEATVLGV 543
 
Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 214-389 1.20e-62

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 460873  Cd Length: 191  Bit Score: 202.66  E-value: 1.20e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 214 YYEHVKISAPNEFDVMFKLEVPRIQLEEYSNTRAYYFVKFKR--------NPKENPLSQFLEGEI---LSASKMLSKFRK 282
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGVPGYVVLKLTRwryylhnpVGRPESLSQWLEFTAegyLSAAKVLSRFQS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 283 IIKEEINDIKD--TDVIMKRKRGGsPAVTLLISE---KISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPF 357
Cdd:pfam03281  81 LVEKALNTVNDsiYGLVYKREKGG-PAVTLAIETsedQYSVDLVPAIECPGIWPKSARWPRCLKRWPSQKVLRKIKSEGF 159

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2287478709 358 YLVPKHAKEGNGFQEETWRLSFSHIEKEILNN 389
Cdd:pfam03281 160 HLVAKSSPWPSSDENYSWRLSFSQAEKVLLKG 191
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 405-444 7.00e-12

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 61.87  E-value: 7.00e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2287478709 405 CRKDCLKLMKYLLEQLKerFKDKKHLDKFSSYHVKTAFFH 444
Cdd:pfam20266   1 CRKKCLRILKKLKEPGK--RDVKTELSKICSYHLKTLFLW 38
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 15-189 1.33e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 57.30  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  15 AGATAPKASARNARGAPMDPTESPAAPEAALPkagkfGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPS 94
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAA-----AAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPS 463

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  95 dATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPglpvsapilvrRDAAPgasKLRAVLEKLKL 174
Cdd:PRK07764  464 -AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL-----------RERWP---EILAAVPKRSR 528

                         170
                  ....*....|....*
gi 2287478709 175 SRDDISTAAGMVKGV 189
Cdd:PRK07764  529 KTWAILLPEATVLGV 543
 
Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 214-389 1.20e-62

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 460873  Cd Length: 191  Bit Score: 202.66  E-value: 1.20e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 214 YYEHVKISAPNEFDVMFKLEVPRIQLEEYSNTRAYYFVKFKR--------NPKENPLSQFLEGEI---LSASKMLSKFRK 282
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGVPGYVVLKLTRwryylhnpVGRPESLSQWLEFTAegyLSAAKVLSRFQS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 283 IIKEEINDIKD--TDVIMKRKRGGsPAVTLLISE---KISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPF 357
Cdd:pfam03281  81 LVEKALNTVNDsiYGLVYKREKGG-PAVTLAIETsedQYSVDLVPAIECPGIWPKSARWPRCLKRWPSQKVLRKIKSEGF 159

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2287478709 358 YLVPKHAKEGNGFQEETWRLSFSHIEKEILNN 389
Cdd:pfam03281 160 HLVAKSSPWPSSDENYSWRLSFSQAEKVLLKG 191
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 405-444 7.00e-12

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 61.87  E-value: 7.00e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2287478709 405 CRKDCLKLMKYLLEQLKerFKDKKHLDKFSSYHVKTAFFH 444
Cdd:pfam20266   1 CRKKCLRILKKLKEPGK--RDVKTELSKICSYHLKTLFLW 38
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 15-189 1.33e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 57.30  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  15 AGATAPKASARNARGAPMDPTESPAAPEAALPkagkfGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPS 94
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAA-----AAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPS 463

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  95 dATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPglpvsapilvrRDAAPgasKLRAVLEKLKL 174
Cdd:PRK07764  464 -AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL-----------RERWP---EILAAVPKRSR 528

                         170
                  ....*....|....*
gi 2287478709 175 SRDDISTAAGMVKGV 189
Cdd:PRK07764  529 KTWAILLPEATVLGV 543
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
2-187 1.57e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 54.09  E-value: 1.57e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   2 QPWHGKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSApDTQERPPVRATGARA 81
Cdd:PRK07003  373 PARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA-DRGDDAADGDAPVPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  82 KKAPQRAQDTQPSDATSAPG---------AEGLEPPAAREPAlSRAGSCRQRGARCSTKPRPP--------PGPWDVPSP 144
Cdd:PRK07003  452 KANARASADSRCDERDAQPPadsgsasapASDAPPDAAFEPA-PRAAAPSAATPAAVPDARAPaaasredaPAAAAPPAP 530

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 2287478709 145 GLPVSAPILVRRDA-APGASKLRAVLEK--LKLSRDDISTAAGMVK 187
Cdd:PRK07003  531 EARPPTPAAAAPAArAGGAAAALDVLRNagMRVSSDRGARAAAAAK 576
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 10-168 3.12e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.07  E-value: 3.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  10 QRASEAGATAPKASARNARGAPMDPTESPAAPEAAlPKAGKFGPARKSGSRQKKSAPDTQERP---PVRATGARAKKAPQ 86
Cdd:PRK07764  605 SSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEA-SAAPAPGVAAPEHHPKHVAVPDASDGGdgwPAKAGGAAPAAPPP 683

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  87 RAQDTQPSDATSAPGAEGLEPPAAREP---ALSRAGSCRQRGARCSTKPR-------PPPGPWDVPSPG--LPVSAPILV 154
Cdd:PRK07764  684 APAPAAPAAPAGAAPAQPAPAPAATPPagqADDPAAQPPQAAQGASAPSPaaddpvpLPPEPDDPPDPAgaPAQPPPPPA 763

                         170
                  ....*....|....
gi 2287478709 155 RRDAAPGASKLRAV 168
Cdd:PRK07764  764 PAPAAAPAAAPPPS 777
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
6-160 6.41e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 52.19  E-value: 6.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   6 GKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAP 85
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2287478709  86 QRAQDTQPSDATSAPGAEGLEPPAAREPALSRAgscrQRGARCSTKPRPPPgPWDVPSPGLPVSAPilVRRDAAP 160
Cdd:PRK12323  451 APAPAAAPAAAARPAAAGPRPVAAAAAAAPARA----APAAAPAPADDDPP-PWEELPPEFASPAP--AQPDAAP 518
PHA03247 PHA03247
large tegument protein UL36; Provisional
 10-147 1.42e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 1.42e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   10 QRASEAGATAPKASARNARGAPMDPTESPA---APEAALPKAgkfgparksgsrqkkSAPDTQERPPVRATGARAKKAPQ 86
Cdd:PHA03247  2780 PRRLTRPAVASLSESRESLPSPWDPADPPAavlAPAAALPPA---------------ASPAGPLPPPTSAQPTAPPPPPG 2844

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   87 RAQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCS---------TKPRPPPGPWDVPSPGLP 147
Cdd:PHA03247  2845 PPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLArpavsrsteSFALPPDQPERPPQPQAP 2914
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
6-162 2.34e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 50.23  E-value: 2.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   6 GKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQkkSAPDTQERPPVRATGARAKKAP 85
Cdd:PRK07003  436 ADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFE--PAPRAAAPSAATPAAVPDARAP 513

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  86 QRAQ--DTQPSDATSAPGAEGLEPPAAREPAlsRAGSC-------RQRGARCST--------------------KPRPPP 136
Cdd:PRK07003  514 AAASreDAPAAAAPPAPEARPPTPAAAAPAA--RAGGAaaaldvlRNAGMRVSSdrgaraaaaakpaaapaaapKPAAPR 591

                         170       180
                  ....*....|....*....|....*.
gi 2287478709 137 GPWDVPSPGLPVSAPILVRRDAAPGA 162
Cdd:PRK07003  592 VAVQVPTPRARAATGDAPPNGAARAE 617
PHA03247 PHA03247
large tegument protein UL36; Provisional
 3-211 3.33e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.94  E-value: 3.33e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    3 PWHGKAMQRASEAGATAPKASARNARGAPMDPTESPAAP-------EAALPKAGKFGP----ARKSGSRQKKSAPDTQER 71
Cdd:PHA03247  2801 PWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPppppgppPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPAR 2880

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   72 PPVRATgARAKKAPQRAQDTQPSDATSAPGAEGLePPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAP 151
Cdd:PHA03247  2881 PPVRRL-ARPAVSRSTESFALPPDQPERPPQPQA-PPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA 2958

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2287478709  152 ILVRRDAAPGASKLRAVLEKLKLSRDDISTAAGMVKGVVDHLL---------LRLKCDSAFRGVGLLNT 211
Cdd:PHA03247  2959 VPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLsrvsswassLALHEETDPPPVSLKQT 3027
PHA03247 PHA03247
large tegument protein UL36; Provisional
 11-162 5.16e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 5.16e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   11 RASEAGATAPKASAR-NARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQ-------ERPPVRATGARAK 82
Cdd:PHA03247  2583 TSRARRPDAPPQSARpRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPpptvpppERPRDDPAPGRVS 2662

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   83 KAPQRAQDTQPSDATSAPgaEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSApilvrRDAAPGA 162
Cdd:PHA03247  2663 RPRRARRLGRAAQASSPP--QRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA-----RQASPAL 2735
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 8-160 6.23e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 48.83  E-value: 6.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   8 AMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGsrqkksaPDTQERPPVRATGARAKKAPQR 87
Cdd:PRK07764  648 AAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAP-------AQPAPAPAATPPAGQADDPAAQ 720

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2287478709  88 AQdTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAP 160
Cdd:PRK07764  721 PP-QAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
8-167 7.03e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 7.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   8 AMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAgkfgparksgSRQKKSAPDTQERPPVRAtgarAKKAPQR 87
Cdd:PRK12323  425 RRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPA----------AAGPRPVAAAAAAAPARA----APAAAPA 490

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  88 AQDTQPSDATSAPGAEGLEPPAAREPALS--RAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPilVRRDAAPGASKL 165
Cdd:PRK12323  491 PADDDPPPWEELPPEFASPAPAQPDAAPAgwVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAA--TEPVVAPRPPRA 568


                  ..
gi 2287478709 166 RA 167
Cdd:PRK12323  569 SA 570
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 3-170 1.16e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 47.79  E-value: 1.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   3 PWHGKAMQRASEAGATAPKASARNArGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAK 82
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPA-AAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  83 KAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGscRQRGARCstkPRPPPGP-WDVPSPGLPVSAPI--------- 152
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAA--APAAARL---TPTEEGDvWHATVQQLAAAEAItalarelal 519

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2287478709 153 ---LVRRDA-------------APGA-SKLRAVLE 170
Cdd:PRK14951  520 qseLVARDGdqwllrvereslnQPGArERLRAALE 554
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
49-167 1.22e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.95  E-value: 1.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  49 GKFGPARKSgsrqkkSAPDTQERPPVRATGArAKKAPQRAQDTQPSDATSAPGAEG-LEPPAAREPALSRAGSCRQRGAR 127
Cdd:PRK12323  370 GGAGPATAA------AAPVAQPAPAAAAPAA-AAPAPAAPPAAPAAAPAAAAAARAvAAAPARRSPAPEALAAARQASAR 442

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2287478709 128 CS-TKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGASKLRA 167
Cdd:PRK12323  443 GPgGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARA 483
motB PRK05996
MotB family protein;
7-112 1.84e-05

MotB family protein;


Pssm-ID: 235665 [Multi-domain]  Cd Length: 423  Bit Score: 47.00  E-value: 1.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   7 KAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAA-LPKAGKFGPARKSGSR-QKKSAPDTQErPPVRATGARAKKA 84
Cdd:PRK05996  188 KQVEVTTAGDLLPPGQAREQAQGAKSATAAPATVPQAApLPQAQPKKAATEEELIaDAKKAATGEP-AANAAKAAKPEPM 266

                          90       100
                  ....*....|....*....|....*...
gi 2287478709  85 PQRAQDTQPSDATSAPGAEGLEPPAARE 112
Cdd:PRK05996  267 PDDQQKEAEQLQAAIAQAIGGVAGKLAE 294
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 49-174 1.99e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 47.25  E-value: 1.99e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  49 GKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDAtSAPGAEGLePPAAREPALSRAGSCRQRGARC 128
Cdd:PRK14954  378 GGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPA-SAPTPEQQ-PPVARSAPLPPSPQASAPRNVA 455

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2287478709 129 STKPRPPPGPWDV--------PSPGLPVSApilvrRDAAP---GASKLRAVLEKLKL 174
Cdd:PRK14954  456 SGKPGVDLGSWQGkfmnftrnGSRKQPVQA-----SSSDAaqtGVFEGVAELEKLRM 507
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
16-167 2.66e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 46.77  E-value: 2.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  16 GATAPKASARNARGAPMD-PTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQER---PPVR---------ATGARAK 82
Cdd:PRK07003  366 GAPGGGVPARVAGAVPAPgARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRaeaPPAApappatadrGDDAADG 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  83 KAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQrGARCSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGA 162
Cdd:PRK07003  446 DAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPP-DAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAA 524


                  ....*
gi 2287478709 163 SKLRA 167
Cdd:PRK07003  525 AAPPA 529
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 19-163 3.92e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 46.32  E-value: 3.92e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   19 APKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQR----AQDTQPS 94
Cdd:PHA03307   140 PVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRrsspISASASS 219

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2287478709   95 DATSAPGAEGLEPPAAREPALSRAGSCRQRGARcSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGAS 163
Cdd:PHA03307   220 PAPAPGRSAADDAGASSSDSSSSESSGCGWGPE-NECPLPRPAPITLPTRIWEASGWNGPSSRPGPASS 287
dnaA PRK14086
chromosomal replication initiator protein DnaA;
11-161 5.79e-05

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 45.59  E-value: 5.79e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  11 RASEAGATAPKASARNARGAPMD--PTESPAAP-EAALPKAGKFGPARKSGSRQKKSAPDTQERPPvratGARAKKAPQR 87
Cdd:PRK14086  115 RRPYEGYGGPRADDRPPGLPRQDqlPTARPAYPaYQQRPEPGAWPRAADDYGWQQQRLGFPPRAPY----ASPASYAPEQ 190

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2287478709  88 AQDTQPSDAtsapgAEGLEPPAAREPALSRAGSCRQRGARCSTkPRPPPG----PWDVPSPGLPVSAPILVRRDAAPG 161
Cdd:PRK14086  191 ERDREPYDA-----GRPEYDQRRRDYDHPRPDWDRPRRDRTDR-PEPPPGaghvHRGGPGPPERDDAPVVPIRPSAPG 262
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 2-144 1.15e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.16  E-value: 1.15e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    2 QPWHGKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALP-----KAGKFGPARKSGSRQKKSAPDTQERPPVRA 76
Cdd:PHA03307   759 SNPSLVPAKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRrsgpaADAASRTASKRKSRSHTPDGGSESSGPARP 838

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2287478709   77 TGARAKKAPQRAQDTQPS-------DATSAPGAEGLEPPAAREPAL---SRAGSCRQRGARC-STKPRPPPGPWDVPSP 144
Cdd:PHA03307   839 PGAAARPPPARSSESSKSkpaaaggRARGKNGRRRPRPPEPRARPGaaaPPKAAAAAPPAGApAPRPRPAPRVKLGPMP 917
PHA03247 PHA03247
large tegument protein UL36; Provisional
 8-162 1.17e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 1.17e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    8 AMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPpvraTGARAKKAPQR 87
Cdd:PHA03247  2794 SRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAP----GGDVRRRPPSR 2869

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2287478709   88 AQDTQPSDATSAPGAEGLEPPAAREP---ALSRAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGA 162
Cdd:PHA03247  2870 SPAAKPAAPARPPVRRLARPAVSRSTesfALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 27-201 1.75e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.32  E-value: 1.75e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  27 ARGAPMDPTESPAAPEAALPKAGKfgPARKSGSRQKKSAPDTQERPPVrATGARAKKAPQRAQDTQPSDATSAPGAEGLE 106
Cdd:PRK14951  370 AEAAAPAEKKTPARPEAAAPAAAP--VAQAAAAPAPAAAPAAAASAPA-APPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 107 PPAAREPALSRAGSCRQRgarcSTKPRPPPGPWDVPSPGLPVSAPIlvrRDAAPG------------ASKLRAVLEKLKL 174
Cdd:PRK14951  447 LAPAPPAQAAPETVAIPV----RVAPEPAVASAAPAPAAAPAAARL---TPTEEGdvwhatvqqlaaAEAITALARELAL 519

                         170       180
                  ....*....|....*....|....*..
gi 2287478709 175 SrddistaAGMVKGVVDHLLLRLKCDS 201
Cdd:PRK14951  520 Q-------SELVARDGDQWLLRVERES 539
PHA03247 PHA03247
large tegument protein UL36; Provisional
 11-163 3.00e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 3.00e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   11 RASEAGATAPKASArNARGAPMDPTESPAAPEAALPKAGKFGPARKsGSRQKKSAPDTQERPPVRATG--------ARAK 82
Cdd:PHA03247  2713 HALVSATPLPPGPA-AARQASPALPAAPAPPAVPAGPATPGGPARP-ARPPTTAGPPAPAPPAAPAAGpprrltrpAVAS 2790

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   83 KAPQRAQDTQPSDATSAPGAegLEPPAAREPALSR-AGSCRQRGARCSTKPRPPPGPwdvPSPGLPVSAPIL----VRRD 157
Cdd:PHA03247  2791 LSESRESLPSPWDPADPPAA--VLAPAAALPPAASpAGPLPPPTSAQPTAPPPPPGP---PPPSLPLGGSVApggdVRRR 2865


                   ....*.
gi 2287478709  158 AAPGAS 163
Cdd:PHA03247  2866 PPSRSP 2871
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 42-223 4.10e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.14  E-value: 4.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  42 EAALPKAGKFGPARKSGSRQKKSAPDTQERP---PV---RATGARAKKAPQRAQDTQPSDATSAPgAEGLEPPAAREPAL 115
Cdd:PTZ00449  539 ESDEPKEGGKPGETKEGEVGKKPGPAKEHKPskiPTlskKPEFPKDPKHPKDPEEPKKPKRPRSA-QRPTRPKSPKLPEL 617

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 116 SRAGSCRQRgARCSTKPRPPPGPWDVPSPGLPVSaPILVRRDAAPGASKL---RAVLEKLklsRDDISTAAGMVKGVVDH 192
Cdd:PTZ00449  618 LDIPKSPKR-PESPKSPKRPPPPQRPSSPERPEG-PKIIKSPKPPKSPKPpfdPKFKEKF---YDDYLDAAAKSKETKTT 692

                         170       180       190
                  ....*....|....*....|....*....|.
gi 2287478709 193 LLLRLKCDSAFRGVGLLNTGSYYEHVKISAP 223
Cdd:PTZ00449  693 VVLDESFESILKETLPETPGTPFTTPRPLPP 723
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 6-163 4.67e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.85  E-value: 4.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    6 GKAMQRASEAGATAPKASARNARGA----PMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARA 81
Cdd:PHA03307   148 PAASPPAAGASPAAVASDAASSRQAalplSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRS 227

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   82 KKAPQRAQD-----TQPSDATSAPGAEGLEPPAAREPALSR-----AGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAP 151
Cdd:PHA03307   228 AADDAGASSsdsssSESSGCGWGPENECPLPRPAPITLPTRiweasGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGP 307

                          170
                   ....*....|..
gi 2287478709  152 ILVRRDAAPGAS 163
Cdd:PHA03307   308 APSSPRASSSSS 319
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
17-162 4.71e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 4.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  17 ATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPP--VRATGARAKKAPQRAQDTQPS 94
Cdd:PRK07003  357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKaaAAAAATRAEAPPAAPAPPATA 436

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2287478709  95 DATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDvpspglpvSAPILVRRDAAPGA 162
Cdd:PRK07003  437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPAS--------DAPPDAAFEPAPRA 496
PHA03378 PHA03378
EBNA-3B; Provisional
 2-172 5.08e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 42.75  E-value: 5.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   2 QPWHGKAMQRASEAGATAPKASA-RNARGAPMDPTesPAAPEAALPkagkfgparksGSRQKKSAPDTQERPPVRATGA- 79
Cdd:PHA03378  668 QIGHIPYQPSPTGANTMLPIQWApGTMQPPPRAPT--PMRPPAAPP-----------GRAQRPAAATGRARPPAAAPGRa 734

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  80 -RAKKAPQRAQDTQ--PSDATSAPGAEGLEPPAAREPAlsRAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVRR 156
Cdd:PHA03378  735 rPPAAAPGRARPPAaaPGRARPPAAAPGRARPPAAAPG--APTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPR 812

                         170
                  ....*....|....*.
gi 2287478709 157 DAAPGASKLRAVLEKL 172
Cdd:PHA03378  813 AAPGQQGPTKQILRQL 828
PHA03247 PHA03247
large tegument protein UL36; Provisional
 11-164 5.45e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 5.45e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   11 RASEAGATAPKASARNAR----------GAPMDPTeSPAAPEAALPKAGKFGPARKSGSrqkkSAPDTQERPPVRATGAR 80
Cdd:PHA03247  2742 PAVPAGPATPGGPARPARppttagppapAPPAAPA-AGPPRRLTRPAVASLSESRESLP----SPWDPADPPAAVLAPAA 2816

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   81 AKKAPQRAQDTQPSDATSAPGAEGLePPAAREPALSRAGSCRQRGarcSTKPRPPPGPwDVPSPGLPVSAPilVRRDAAP 160
Cdd:PHA03247  2817 ALPPAASPAGPLPPPTSAQPTAPPP-PPGPPPPSLPLGGSVAPGG---DVRRRPPSRS-PAAKPAAPARPP--VRRLARP 2889


                   ....
gi 2287478709  161 GASK 164
Cdd:PHA03247  2890 AVSR 2893
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 8-151 6.66e-04

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 41.86  E-value: 6.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   8 AMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQR 87
Cdd:PTZ00436  199 AKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPP 278

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2287478709  88 AQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPsPGLPVSAP 151
Cdd:PTZ00436  279 AKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATP-PAKAAAPP 341
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 10-151 6.78e-04

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 41.86  E-value: 6.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  10 QRASEAGATAPKASARNARGAPMDPTESPAAPE--AALPKAGKFGPARKSGSRQKKSAPDTQER-PPVRATGARAKKAPQ 86
Cdd:PTZ00436  191 EDAAAAAAAKQKAAAKKAAAPSGKKSAKAAAPAkaAAAPAKAAAPPAKAAAAPAKAAAAPAKAAaPPAKAAAPPAKAAAP 270

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2287478709  87 RAQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPsPGLPVSAP 151
Cdd:PTZ00436  271 PAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAP-PAKAATPP 334
PHA03291 PHA03291
envelope glycoprotein I; Provisional
 29-159 7.19e-04

envelope glycoprotein I; Provisional


Pssm-ID: 223033 [Multi-domain]  Cd Length: 401  Bit Score: 41.86  E-value: 7.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  29 GAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQrAQDTQPSDATSAPGAEGLEPP 108
Cdd:PHA03291  206 ATPRPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEGTPAPPTPG-GGEAPPANATPAPEASRYELT 284

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709 109 AARE-----PALSRA----GSCRQRGARCSTKPRPPPGPwdVPSPGLPVSAPILVRRDAA 159
Cdd:PHA03291  285 VTQIiqiaiPASIIAcvflGSCACCLHRRCRRRRRRPAR--IYRPPSPVAPSISAVNEAA 342
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 12-111 8.17e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.18  E-value: 8.17e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   12 ASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAgkfgparksgsrqkKSAPDTQERPPVRATGARAKKAP-QRAQD 90
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA--------------AAAPAAPPKPAAAAAAAAAPAAPpAAAAA 105

                           90       100
                   ....*....|....*....|.
gi 2287478709   91 TQPSDATSAPGAEGLEPPAAR 111
Cdd:PRK12270   106 AAPAAAAVEDEVTPLRGAAAA 126
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
11-150 1.22e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.37  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  11 RASEAGATAPKASARN---ARGAPMDPTESPAAPEAALPKAGKFGPA------RKSG---SRQKKSAPDTQERPPVrATG 78
Cdd:PRK07003  504 PAAVPDARAPAAASREdapAAAAPPAPEARPPTPAAAAPAARAGGAAaaldvlRNAGmrvSSDRGARAAAAAKPAA-APA 582

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2287478709  79 ARAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAgscrqrgarcstkpRPPPGPWD--VPSPGLPVSA 150
Cdd:PRK07003  583 AAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAES--------------RGAPPPWEdiPPDDYVPLSA 642
PHA03247 PHA03247
large tegument protein UL36; Provisional
 2-183 1.35e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 1.35e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    2 QPWHGKAMQRASEAGATAPKASARNARGAPMDPTEsPAAPEAALPKAgkfgparkSGSRQKKSAPDTQERPPVRATGARA 81
Cdd:PHA03247  2651 RPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR-RAARPTVGSLT--------SLADPPPPPPTPEPAPHALVSATPL 2721

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   82 KKAPQRAQDTQPsdatsAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPgpwdvpsPGLPVSAPilVRRDAAPG 161
Cdd:PHA03247  2722 PPGPAAARQASP-----ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP-------PAAPAAGP--PRRLTRPA 2787

                          170       180
                   ....*....|....*....|..
gi 2287478709  162 ASKLRAVLEKLKLSRDDISTAA 183
Cdd:PHA03247  2788 VASLSESRESLPSPWDPADPPA 2809
recX PRK14136
recombination regulator RecX; Provisional
 15-117 1.50e-03

recombination regulator RecX; Provisional


Pssm-ID: 237620 [Multi-domain]  Cd Length: 309  Bit Score: 40.75  E-value: 1.50e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  15 AGATAPKAS-------ARNARGAPMDPTESPAAPEAALPK--AGKFGPARKSGSRQKKSAPDTQERPPVRATGA-----R 80
Cdd:PRK14136   42 AGRTATRASddalvsfEIAAPDEPFDDDESFDAHDRARRRvsGVGVRDAGAPGGRAADARAANLSSAAKRAEAAgdvytR 121

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2287478709  81 AKKAPQRAQD-TQPSDATSAPGAEGLEPPAAREPALSR 117
Cdd:PRK14136  122 TSQHPRRTRRaAGPFHSDSSPSASSEDDGAARSRASSR 159
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 17-168 1.88e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 1.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709  17 ATAPKASARnarGAPMDPTESPAAPEAALPKAGKfGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDA 96
Cdd:PRK07764  589 GPAPGAAGG---EGPPAPASSGPPEEAARPAAPA-APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASD 664

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2287478709  97 TSAPGAEGLEPPAAREPAlSRAGSCRQRGARCSTKPRPPPGPWDVPSPGlPVSAPILVRRDAAPGASKLRAV 168
Cdd:PRK07764  665 GGDGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPAPAATPPAG-QADDPAAQPPQAAQGASAPSPA 734
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 11-151 2.34e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 2.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   11 RASEAGATAPKASARNARGAPmdpteSPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQD 90
Cdd:PHA03307   278 PSSRPGPASSSSSPRERSPSP-----SPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS 352

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2287478709   91 TQPSDATSAPGaeglePPAAREPALSRAGSCRQRGARcstkPRPPPGPWDVPSPGLPVSAP 151
Cdd:PHA03307   353 PSRPPPPADPS-----SPRKRPRPSRAPSSPAASAGR----PTRRRARAAVAGRARRRDAT 404
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 3-164 3.47e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.15  E-value: 3.47e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709    3 PWHGKAMQRASEAGATAPKASARNArGAPMDPTESPAAPE--AALPKAGKFGPARKSGSRQKKSAPDTQERPPVRATGAR 80
Cdd:PHA03307    89 TWSLSTLAPASPAREGSPTPPGPSS-PDPPPPTPPPASPPpsPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAA 167

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   81 AKKAPQRAQDTqPSDATSAPGAEGLEPPAAREPALSragscrqrgarcstkPRPPPGPWDVPSPGLPVSAPILVRRDAAP 160
Cdd:PHA03307   168 SSRQAALPLSS-PEETARAPSSPPAEPPPSTPPAAA---------------SPRPPRRSSPISASASSPAPAPGRSAADD 231


                   ....
gi 2287478709  161 GASK 164
Cdd:PHA03307   232 AGAS 235
PRK12495 PRK12495
hypothetical protein; Provisional
 6-120 4.22e-03

hypothetical protein; Provisional


Pssm-ID: 183558 [Multi-domain]  Cd Length: 226  Bit Score: 38.70  E-value: 4.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   6 GKAMQRASEAGATAPKASARNARGAPMD---PTESPAAPEAALPKAGKfgparksgsrqkKSAPDTQERPPVRATGARAk 82
Cdd:PRK12495   72 GAAGDDAGDGAEATAPSDAGSQASPDDDaqpAAEAEAADQSAPPEASS------------TSATDEAATDPPATAAARD- 138

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2287478709  83 kAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGS 120
Cdd:PRK12495  139 -GPTPDPTAQPATPDERRSPRQRPPVSGEPPTPSTPDA 175
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 6-136 4.24e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 39.55  E-value: 4.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   6 GKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPDTQ-ERPPVRATGARAKKA 84
Cdd:PTZ00436  217 AKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKaAAPPAKAAAPPAKAA 296

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2287478709  85 PQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPP 136
Cdd:PTZ00436  297 AAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PHA03247 PHA03247
large tegument protein UL36; Provisional
 10-151 5.28e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.54  E-value: 5.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   10 QRASEAGATAPKASARN-ARGAPMDPTESPAAPEAALPKAGKFGPArksGSRQKKSAPDTQERPPVRATGARAKKAPqRA 88
Cdd:PHA03247  2681 QRPRRRAARPTVGSLTSlADPPPPPPTPEPAPHALVSATPLPPGPA---AARQASPALPAAPAPPAVPAGPATPGGP-AR 2756

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2287478709   89 QDTQPSDATSAPGAEGLEPPAAREPALSRAGscrqrGARCSTKPRPPPGPWDVPSPGLPVSAP 151
Cdd:PHA03247  2757 PARPPTTAGPPAPAPPAAPAAGPPRRLTRPA-----VASLSESRESLPSPWDPADPPAAVLAP 2814
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 11-151 7.49e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.00  E-value: 7.49e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   11 RASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAG----KFGPARKSGSRQKKSAPDTQERPPVRATgARAKKAPQ 86
Cdd:PHA03307   745 RARASAWDITDALFSNPSLVPAKLAEALALLEPAEPQRGagssPPVRAEAAFRRPGRLRRSGPAADAASRT-ASKRKSRS 823

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   87 RAQDTQP--SDATSAPGAEGLEPPAAREPALSRAGSC---RQRGARCSTKPRPPPGPWDVPSPGLPVSAP 151
Cdd:PHA03307   824 HTPDGGSesSGPARPPGAAARPPPARSSESSKSKPAAaggRARGKNGRRRPRPPEPRARPGAAAPPKAAA 893
PHA03247 PHA03247
large tegument protein UL36; Provisional
 33-163 7.88e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.15  E-value: 7.88e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2287478709   33 DPTeSPAAPEAALPKAGKFGPArksgsrqKKSAPDTQErPPVRATGARAKKAPQRAQDTQPSD------ATSAPGAEGLE 106
Cdd:PHA03247  2550 DPP-PPLPPAAPPAAPDRSVPP-------PRPAPRPSE-PAVTSRARRPDAPPQSARPRAPVDdrgdprGPAPPSPLPPD 2620

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2287478709  107 PPAAREPALSRAGSCRQRGARCSTKPRPPPGPWDVPSPGlPVSAPILVRRDA-APGAS 163
Cdd:PHA03247  2621 THAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPG-RVSRPRRARRLGrAAQAS 2677
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH