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Conserved domains on  [gi|6005810|ref|NP_009112|]
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mitogen-activated protein kinase kinase kinase kinase 1 isoform 2 [Homo sapiens]

Protein Classification

mitogen-activated protein kinase kinase kinase kinase( domain architecture ID 10159658)

mitogen-activated protein kinase kinase kinase kinase (MAP4K) is a serine/threonine kinase that catalyzes the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates; it is involved in MAPK signaling pathways by activating a MAPK kinase kinase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
16-274 0e+00

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


:

Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 529.18  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06613   1 DYELIQRIGSGTYGDVYKARNIATGELAAVKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd06613  81 GGSLQDIYQVTGPLSELQIAYVCRETLKGLAYLHSTGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTL 255
Cdd:cd06613 161 PYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIPKSNFDPPKLKDKEKWSPDFHDFIKKCL 240
                       250
                ....*....|....*....
gi 6005810  256 TKSPKKRPSATKMLSHQLV 274
Cdd:cd06613 241 TKNPKKRPTATKLLQHPFV 259
CNH smart00036
Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;
500-807 5.01e-99

Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;


:

Pssm-ID: 214481  Cd Length: 302  Bit Score: 310.05  E-value: 5.01e-99
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     500 STAAWTHPSTKDQ-HLLLGAEEGIFILNRNDQEATLEMLFPSR---TTWVYSINNVLMSLSGKTPHLYSHSILGLLERKE 575
Cdd:smart00036   1 NTAKWNHPITCDGkWLLVGTEEGLYVLNISDQPGTLEKLIGRRsvtQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     576 tragnpiaHISPHRLLARKNmVSTKIQDTKGCRACCVAEGASSggPFLCGALETSVVLLQWYQPMNKFLLVRQV-LFPLP 654
Cdd:smart00036  81 --------ALGSARLVIRKN-VLTKIPDVKGCHLCAVVNGKRS--LFLCVALQSSVVLLQWYNPLKKFKLFKSKfLFPLI 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     655 TPLSVFALLTGPGSELPAVCIGVSPGrPGKSVLFH--TVRFGALSCWLGEMSTEHrGPVQVTQVEEDMVMVLMDGSVKLV 732
Cdd:smart00036 150 SPVPVFVELVSSSFERPGICIGSDKG-GGDVVQFHesLVSKEDLSLPFLSEETSL-KPISVVQVPRDEVLLCYDEFGVFV 227
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810     733 TPEGSpvRGLRTPEIPMTEAVEAVAMVGGQLQAFWKHGVQVWALGSDQLLQELRD-PTLTFRLLG-SPRLECSGTIS 807
Cdd:smart00036 228 NLYGK--RRSRNPILHWEFMPESFAYHSPYLLAFHDNGIEIRSIKTGELLQELADrETRKIRLLGsSDRKILLSSSP 302
 
Name Accession Description Interval E-value
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
16-274 0e+00

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 529.18  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06613   1 DYELIQRIGSGTYGDVYKARNIATGELAAVKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd06613  81 GGSLQDIYQVTGPLSELQIAYVCRETLKGLAYLHSTGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTL 255
Cdd:cd06613 161 PYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIPKSNFDPPKLKDKEKWSPDFHDFIKKCL 240
                       250
                ....*....|....*....
gi 6005810  256 TKSPKKRPSATKMLSHQLV 274
Cdd:cd06613 241 TKNPKKRPTATKLLQHPFV 259
CNH smart00036
Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;
500-807 5.01e-99

Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;


Pssm-ID: 214481  Cd Length: 302  Bit Score: 310.05  E-value: 5.01e-99
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     500 STAAWTHPSTKDQ-HLLLGAEEGIFILNRNDQEATLEMLFPSR---TTWVYSINNVLMSLSGKTPHLYSHSILGLLERKE 575
Cdd:smart00036   1 NTAKWNHPITCDGkWLLVGTEEGLYVLNISDQPGTLEKLIGRRsvtQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     576 tragnpiaHISPHRLLARKNmVSTKIQDTKGCRACCVAEGASSggPFLCGALETSVVLLQWYQPMNKFLLVRQV-LFPLP 654
Cdd:smart00036  81 --------ALGSARLVIRKN-VLTKIPDVKGCHLCAVVNGKRS--LFLCVALQSSVVLLQWYNPLKKFKLFKSKfLFPLI 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     655 TPLSVFALLTGPGSELPAVCIGVSPGrPGKSVLFH--TVRFGALSCWLGEMSTEHrGPVQVTQVEEDMVMVLMDGSVKLV 732
Cdd:smart00036 150 SPVPVFVELVSSSFERPGICIGSDKG-GGDVVQFHesLVSKEDLSLPFLSEETSL-KPISVVQVPRDEVLLCYDEFGVFV 227
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810     733 TPEGSpvRGLRTPEIPMTEAVEAVAMVGGQLQAFWKHGVQVWALGSDQLLQELRD-PTLTFRLLG-SPRLECSGTIS 807
Cdd:smart00036 228 NLYGK--RRSRNPILHWEFMPESFAYHSPYLLAFHDNGIEIRSIKTGELLQELADrETRKIRLLGsSDRKILLSSSP 302
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
17-274 2.00e-86

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 275.18  E-value: 2.00e-86
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:smart00220   1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKkDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRlSFIGT 175
Cdd:smart00220  81 GGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLT-TFVGT 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     176 PYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKgKWSAAFHNFIKVTL 255
Cdd:smart00220 160 PEYMAPE---VLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW-DISPEAKDLIRKLL 235
                          250
                   ....*....|....*....
gi 6005810     256 TKSPKKRPSATKMLSHQLV 274
Cdd:smart00220 236 VKDPEKRLTAEEALQHPFF 254
CNH pfam00780
CNH domain; Domain found in NIK1-like kinase, mouse citron and yeast ROM1, ROM2. Unpublished ...
511-796 5.33e-50

CNH domain; Domain found in NIK1-like kinase, mouse citron and yeast ROM1, ROM2. Unpublished observations.


Pssm-ID: 459938  Cd Length: 261  Bit Score: 176.67  E-value: 5.33e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    511 DQHLLLGAEEGIFILNRNDQeATLEMLF-PSRTTWVYSIN--NVLMSLSGKTPHLYSHSILGLLERKEtragnpiahisp 587
Cdd:pfam00780   2 GQNLLLGTEEGLYVLNRSGP-REPVRIIdKKRVTQLAVLEefNLLLLLSGKDKRLYVYPLSALDSREE------------ 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    588 hrlLARKNMVSTKIQDTKGCRACCVaeGASSGGPFLCGALETSVVLLQWYQP-MNKFLLVRQvlFPLPTPLSVFALLTGp 666
Cdd:pfam00780  69 ---NDRKDAAKNKLPETKGCHFFKV--GRHSNGRFLVVAVKRTIKLLEWYEPlLDKFRKFKE--FYLPSPPVSIELLKS- 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    667 gselpAVCIGVSPGrpgksvlFHTVRFGALSCWLGEMST------EHRGPVQVTQVEEDMVMVLMDGSVKLVTPEGSPVR 740
Cdd:pfam00780 141 -----KLCVGCAKG-------FEIVSLDSKATESLLTSLlfanrqENLKPLAVVRLDRSEFLLCYNEFGVYVNLQGRRSR 208
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810    741 glrTPEIPMTEAVEAVAMVGGQLQAFWKHGVQVWALGSDQLLQELRDPTLTFRLLG 796
Cdd:pfam00780 209 ---PWEIEWEGAPEAVAYLYPYLLAFHDNFIEIRDVETGELVQEIAGRKIRFLNSG 261
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
14-474 7.22e-48

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 177.51  E-value: 7.22e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTL---QKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:COG0515   6 LGRYRILRLLGRGGMGVVYLARDLRLGRPVALKVLRPELAADPEARerfRREARALARLNHPNIVRVYDVGEEDGRPYLV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG-ATLARR 169
Cdd:COG0515  86 MEYVEGESLADLLRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIARALGgATLTQT 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHN 249
Cdd:COG0515 166 GTVVGTPGYMAPEQAR---GEPVDPRSDVYSLGVTLYELLTGRPP-FDGDSPAELLRAHLREPPPPPSELRPDLPPALDA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSHQLVSQPGLNRGLILDLLDKLKNPGKGPSIGDIEDEEPELPPAIPRRIRSTHRSSSLGI 329
Cdd:COG0515 242 IVLRALAKDPEERYQSAAELAAALRAVLRSLAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 321
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  330 PDADCCRRHMEFRKLRGMETRPPANTARLQPPRDLRSSSPRKQLSESSDDDYDDVDIPTPAEDTPPPLPPKPKFRSPSDE 409
Cdd:COG0515 322 APAAAAAAAAAAAALAAAAAAAAAAAAAALLAAAAALAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAALA 401
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  410 GPGSMGDDGQLSPGVLVRCASGPPPNSPRPGPPPSTSSPHLTAHSEPSLWNPPSRELDKPPLLPP 474
Cdd:COG0515 402 AAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAARLLAAAAAAAAAAAAAPLLAALLA 466
Pkinase pfam00069
Protein kinase domain;
17-271 8.67e-46

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 163.18  E-value: 8.67e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV--STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:pfam00069   1 YEVLRKLGSGSFGTVYKAKHRDTGKIVAIKKIKKEKIKKKkdKNILREIKILKKLNHPNIVRLYDAFEDKDNLYLVLEYV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSqkkihrdikganilindagevrladfgisaqigatlarRLSFIG 174
Cdd:pfam00069  81 EGGSLFDLLSEKGAFSEREAKFIMKQILEGLESGSS--------------------------------------LTTFVG 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    175 TPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgKWSAAFHNFIKV 253
Cdd:pfam00069 123 TPWYMAPEV----LGGnPYGPKVDVWSLGCILYELLTGKPPFPGINGNEIYELIIDQPYAFPELPS--NLSEEAKDLLKK 196
                         250
                  ....*....|....*...
gi 6005810    254 TLTKSPKKRPSATKMLSH 271
Cdd:pfam00069 197 LLKKDPSKRLTATQALQH 214
PLN00034 PLN00034
mitogen-activated protein kinase kinase; Provisional
18-282 1.87e-38

mitogen-activated protein kinase kinase; Provisional


Pssm-ID: 215036 [Multi-domain]  Cd Length: 353  Bit Score: 146.89  E-value: 1.87e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    18 DLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:PLN00034  77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVrRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    97 GSLQDiyqvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:PLN00034 157 GSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTI 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   177 YWMAPEVAAVALKGGYNELC--DIWSLGITAIELAELQPPLF-----DVHPLRVLFLMTKSGYQPPRLkekgkwSAAFHN 249
Cdd:PLN00034 233 AYMSPERINTDLNHGAYDGYagDIWSLGVSILEFYLGRFPFGvgrqgDWASLMCAICMSQPPEAPATA------SREFRH 306
                        250       260       270
                 ....*....|....*....|....*....|...
gi 6005810   250 FIKVTLTKSPKKRPSATKMLSHQLVSQPGLNRG 282
Cdd:PLN00034 307 FISCCLQREPAKRWSAMQLLQHPFILRAQPGQG 339
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
17-217 3.61e-19

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 92.17  E-value: 3.61e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEIlilktcR---------HANIVA---------YH 78
Cdd:NF033483   9 YEIGERIGRGGMAEVYLAKDTRLDRDVAVKVLRPDLARDPEFVARFR------ReaqsaaslsHPNIVSvydvgedggIP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    79 gsYlwlqklwICMEFCgAGS-LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:NF033483  83 --Y-------IVMEYV-DGRtLKDYIREHGPLSPEEAVEIMIQILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFG 152
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810   158 IS-AQIGATLARRLSFIGTPYWMAPEVAavalKGGY-NELCDIWSLGITAIELAELQPPlFD 217
Cdd:NF033483 153 IArALSSTTMTQTNSVLGTVHYLSPEQA----RGGTvDARSDIYSLGIVLYEMLTGRPP-FD 209
 
Name Accession Description Interval E-value
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
16-274 0e+00

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 529.18  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06613   1 DYELIQRIGSGTYGDVYKARNIATGELAAVKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd06613  81 GGSLQDIYQVTGPLSELQIAYVCRETLKGLAYLHSTGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTL 255
Cdd:cd06613 161 PYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIPKSNFDPPKLKDKEKWSPDFHDFIKKCL 240
                       250
                ....*....|....*....
gi 6005810  256 TKSPKKRPSATKMLSHQLV 274
Cdd:cd06613 241 TKNPKKRPTATKLLQHPFV 259
STKc_MAP4K5 cd06646
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
7-274 1.48e-150

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270813 [Multi-domain]  Cd Length: 268  Bit Score: 442.16  E-value: 1.48e-150
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    7 DIFNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd06646   1 DILRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd06646  81 LWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAA 246
Cdd:cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSST 240
                       250       260
                ....*....|....*....|....*...
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHLFV 268
STKc_MAP4K3 cd06645
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
7-276 1.68e-139

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. MAP4Ks are involved in MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270812 [Multi-domain]  Cd Length: 272  Bit Score: 414.06  E-value: 1.68e-139
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    7 DIFNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd06645   3 DLSRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDK 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd06645  83 LWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAA 246
Cdd:cd06645 163 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNS 242
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06645 243 FHHFVKMALTKNPKKRPTAEKLLQHPFVTQ 272
STKc_MST1_2 cd06612
Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; ...
13-271 6.51e-117

Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 and MEKK1 by acting as a MAPK kinase kinase kinase. Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132943 [Multi-domain]  Cd Length: 256  Bit Score: 354.65  E-value: 6.51e-117
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDddVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd06612   1 PEEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTG-SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd06612  79 YCGAGSVSDIMKITNkTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGKWSAAFHNFI 251
Cdd:cd06612 159 VIGTPFWMAPE---VIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPPTLSDPEKWSPEFNDFV 233
                       250       260
                ....*....|....*....|
gi 6005810  252 KVTLTKSPKKRPSATKMLSH 271
Cdd:cd06612 234 KKCLVKDPEERPSAIQLLQH 253
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
16-274 2.74e-116

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 353.05  E-value: 2.74e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05122   1 LFEILEKIGKGGFGVVYKARHKKTGQIVAIKKINLESKEKKESILNEIAILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVT-GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRlSFIG 174
Cdd:cd05122  81 GGSLKDLLKNTnKTLTEQQIAYVCKEVLKGLEYLHSHGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDGKTRN-TFVG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  175 TPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFIKVT 254
Cdd:cd05122 160 TPYWMAPEVIQ---GKPYGFKADIWSLGITAIEMAEGKPPYSELPPMKALFLIATNG--PPGLRNPKKWSKEFKDFLKKC 234
                       250       260
                ....*....|....*....|
gi 6005810  255 LTKSPKKRPSATKMLSHQLV 274
Cdd:cd05122 235 LQKDPEKRPTAEQLLKHPFI 254
STKc_MST3_like cd06609
Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs ...
17-274 1.21e-108

Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270786 [Multi-domain]  Cd Length: 274  Bit Score: 333.83  E-value: 1.21e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06609   3 FTLLERIGKGSFGEVYKGIDKRTNQVVAIKVIDLEeAEDEIEDIQQEIQFLSQCDSPYITKYYGSFLKGSKLWIIMEYCG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd06609  83 GGSVLDLLK-PGPLDETYIAFILREVLLGLEYLHSEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLkEKGKWSAAFHNFIKVTL 255
Cdd:cd06609 162 PFWMAPEVIK---QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPPSL-EGNKFSKPFKDFVELCL 235
                       250
                ....*....|....*....
gi 6005810  256 TKSPKKRPSATKMLSHQLV 274
Cdd:cd06609 236 NKDPKERPSAKELLKHKFI 254
STKc_myosinIII_N_like cd06608
N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze ...
11-271 3.89e-101

N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), and mitogen-activated protein kinase (MAPK) kinase kinase kinase 4/6. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270785 [Multi-domain]  Cd Length: 275  Bit Score: 314.63  E-value: 3.89e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVStLQKEILILKT-CRHANIVAYHGSYLwlQK--- 86
Cdd:cd06608   2 PDPAGIFELVEVIGEGTYGKVYKARHKKTGQLAAIKIMDIIEDEEEE-IKLEINILRKfSNHPNIATFYGAFI--KKdpp 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 -----LWICMEFCGAGSLQDIYQVT----GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd06608  79 ggddqLWLVMEYCGGGSVTDLVKGLrkkgKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTEEAEVKLVDFG 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 ISAQIGATLARRLSFIGTPYWMAPEVAAV--ALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPP 235
Cdd:cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACdqQPDASYDARCDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN--PPP 236
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  236 RLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06608 237 TLKSPEKWSKEFNDFISECLIKNYEQRPFTEELLEH 272
STKc_PAK cd06614
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the ...
16-271 7.09e-101

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270789 [Multi-domain]  Cd Length: 255  Bit Score: 312.99  E-value: 7.09e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEpDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06614   1 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR-KQNKELIINEILIMKECKHPNIVDYYDSYLVGDELWVVMEYMD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIG 174
Cdd:cd06614  80 GGSLTDiITQNPVRMNESQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  175 TPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFIKVT 254
Cdd:cd06614 160 TPYWMAPE---VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLEEPPLRALFLITTKG--IPPLKNPEKWSPEFKDFLNKC 234
                       250
                ....*....|....*..
gi 6005810  255 LTKSPKKRPSATKMLSH 271
Cdd:cd06614 235 LVKDPEKRPSAEELLQH 251
CNH smart00036
Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;
500-807 5.01e-99

Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2;


Pssm-ID: 214481  Cd Length: 302  Bit Score: 310.05  E-value: 5.01e-99
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     500 STAAWTHPSTKDQ-HLLLGAEEGIFILNRNDQEATLEMLFPSR---TTWVYSINNVLMSLSGKTPHLYSHSILGLLERKE 575
Cdd:smart00036   1 NTAKWNHPITCDGkWLLVGTEEGLYVLNISDQPGTLEKLIGRRsvtQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     576 tragnpiaHISPHRLLARKNmVSTKIQDTKGCRACCVAEGASSggPFLCGALETSVVLLQWYQPMNKFLLVRQV-LFPLP 654
Cdd:smart00036  81 --------ALGSARLVIRKN-VLTKIPDVKGCHLCAVVNGKRS--LFLCVALQSSVVLLQWYNPLKKFKLFKSKfLFPLI 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     655 TPLSVFALLTGPGSELPAVCIGVSPGrPGKSVLFH--TVRFGALSCWLGEMSTEHrGPVQVTQVEEDMVMVLMDGSVKLV 732
Cdd:smart00036 150 SPVPVFVELVSSSFERPGICIGSDKG-GGDVVQFHesLVSKEDLSLPFLSEETSL-KPISVVQVPRDEVLLCYDEFGVFV 227
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810     733 TPEGSpvRGLRTPEIPMTEAVEAVAMVGGQLQAFWKHGVQVWALGSDQLLQELRD-PTLTFRLLG-SPRLECSGTIS 807
Cdd:smart00036 228 NLYGK--RRSRNPILHWEFMPESFAYHSPYLLAFHDNGIEIRSIKTGELLQELADrETRKIRLLGsSDRKILLSSSP 302
STKc_SLK_like cd06611
Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the ...
12-281 6.03e-95

Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the subfamily include SLK, STK10 (also called LOK for Lymphocyte-Oriented Kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132942 [Multi-domain]  Cd Length: 280  Bit Score: 298.58  E-value: 6.03e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06611   2 NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06611  82 EFCDGGALDSIMLELERgLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAVAL--KGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGKWSAAFH 248
Cdd:cd06611 162 TFIGTPYWMAPEVVACETfkDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPPTLDQPSKWSSSFN 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNR 281
Cdd:cd06611 240 DFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNK 272
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
17-274 2.00e-86

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 275.18  E-value: 2.00e-86
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:smart00220   1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKkDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRlSFIGT 175
Cdd:smart00220  81 GGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLT-TFVGT 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     176 PYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKgKWSAAFHNFIKVTL 255
Cdd:smart00220 160 PEYMAPE---VLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW-DISPEAKDLIRKLL 235
                          250
                   ....*....|....*....
gi 6005810     256 TKSPKKRPSATKMLSHQLV 274
Cdd:smart00220 236 VKDPEKRLTAEEALQHPFF 254
STKc_STK10 cd06644
Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase ...
12-281 1.23e-84

Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase or LOK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK10/LOK is also called polo-like kinase kinase 1 in Xenopus (xPlkk1). It is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132975 [Multi-domain]  Cd Length: 292  Bit Score: 271.91  E-value: 1.23e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06644   9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06644  89 EFCPGGAVDAIMlELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAV-ALKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGKWSAAFH 248
Cdd:cd06644 169 SFIGTPYWMAPEVVMCeTMKDTpYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTLSQPSKWSMEFR 246
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNR 281
Cdd:cd06644 247 DFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279
STKc_MAP4K4_6_N cd06636
N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase ...
11-274 3.52e-81

N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. The MAP4K4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270806 [Multi-domain]  Cd Length: 282  Bit Score: 262.25  E-value: 3.52e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDvSTLQKEILILKT-CRHANIVAYHGSYLWLQ---- 85
Cdd:cd06636  12 RDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-EEIKLEINMLKKySHHRNIATYYGAFIKKSppgh 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 --KLWICMEFCGAGSLQDIYQVT--GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ 161
Cdd:cd06636  91 ddQLWLVMEFCGAGSVTDLVKNTkgNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 IGATLARRLSFIGTPYWMAPEVAAVALK--GGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKE 239
Cdd:cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENpdATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PPPKLKS 248
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  240 KgKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06636 249 K-KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
16-271 9.38e-81

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 259.85  E-value: 9.38e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06627   1 NYQLGDLIGRGAFGSVYKGLNLNTGEFVAIKQISLEkiPKSDLKSVMGEIDLLKKLNHPNIVKYIGSVKTKDSLYIILEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd06627  81 VENGSLASIIKKFGKFPESLVAVYIYQVLEGLAYLHEQGVIHRDIKGANILTTKDGLVKLADFGVATKLNEVEKDENSVV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYqpPRLKEKGkwSAAFHNFIKV 253
Cdd:cd06627 161 GTPYWMAPEVIEMS---GVTTASDIWSVGCTVIELLTGNPPYYDLQPMAALFRIVQDDH--PPLPENI--SPELRDFLLQ 233
                       250
                ....*....|....*...
gi 6005810  254 TLTKSPKKRPSATKMLSH 271
Cdd:cd06627 234 CFQKDPTLRPSAKELLKH 251
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
15-271 1.04e-78

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 254.97  E-value: 1.04e-78
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP-DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06610   1 DDYELIEVIGSGATAVVYAAYCLPKKEKVAIKRIDLEKcQTSMDELRKEIQAMSQCNHPNVVSYYTSFVVGDELWLVMPL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDI--YQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI----GATL 166
Cdd:cd06610  81 LSGGSLLDImkSSYpRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDVKAGNILLGEDGSVKIADFGVSASLatggDRTR 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRL---KEKGKW 243
Cdd:cd06610 161 KVRKTFVGTPCWMAPEV--MEQVRGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN--DPPSLetgADYKKY 236
                       250       260
                ....*....|....*....|....*...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06610 237 SKSFRKMISLCLQKDPSKRPTAEELLKH 264
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
12-276 5.59e-77

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 250.74  E-value: 5.59e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd06642   1 DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEeAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06642  81 MEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLkeKGKWSAAFHNF 250
Cdd:cd06642 160 TFVGTPFWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--SPPTL--EGQHSKPFKEF 232
                       250       260
                ....*....|....*....|....*.
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06642 233 VEACLNKDPRFRPTAKELLKHKFITR 258
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
12-274 1.03e-76

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 250.35  E-value: 1.03e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd06640   1 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEeAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06640  81 MEYLGGGSALDLLR-AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKsgYQPPRLkeKGKWSAAFHNF 250
Cdd:cd06640 160 TFVGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNPPTL--VGDFSKPFKEF 232
                       250       260
                ....*....|....*....|....
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06640 233 IDACLNKDPSFRPTAKELLKHKFI 256
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
12-274 1.63e-76

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 249.60  E-value: 1.63e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd06641   1 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEeAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06641  81 MEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLkeKGKWSAAFHNF 250
Cdd:cd06641 160 *FVGTPFWMAPEVIK---QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN--NPPTL--EGNYSKPLKEF 232
                       250       260
                ....*....|....*....|....
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06641 233 VEACLNKEPSFRPTAKELLKHKFI 256
STKc_TNIK cd06637
Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs ...
11-277 2.01e-76

Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270807 [Multi-domain]  Cd Length: 296  Bit Score: 250.02  E-value: 2.01e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL------WL 84
Cdd:cd06637   2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIkknppgMD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQVT--GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd06637  82 DQLWLVMEFCGAGSVTDLIKNTkgNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTPYWMAPEVAAVALK--GGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEK 240
Cdd:cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENpdATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PAPRLKSK 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  241 gKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV-SQP 277
Cdd:cd06637 240 -KWSKKFQSFIESCLVKNHSQRPSTEQLMKHPFIrDQP 276
STKc_SLK cd06643
Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer ...
12-281 1.26e-75

Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270811 [Multi-domain]  Cd Length: 283  Bit Score: 247.63  E-value: 1.26e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06643   2 NPEDFWEIVGELGDGAFGKVYKAQNKETGILAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06643  82 EFCAGGAVDAVMlELERPLTEPQIRVVCKQTLEALVYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTLQRRD 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAVALKGG--YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGKWSAAFH 248
Cdd:cd06643 162 SFIGTPYWMAPEVVMCETSKDrpYDYKADVWSLGVTLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSPEFK 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNR 281
Cdd:cd06643 240 DFLRKCLEKNVDARWTTSQLLQHPFVSVLVSNK 272
STKc_NAK1_like cd06917
Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
17-276 4.77e-73

Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also called N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270822 [Multi-domain]  Cd Length: 277  Bit Score: 240.45  E-value: 4.77e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHA---NIVAYHGSYLWLQKLWICME 92
Cdd:cd06917   3 YRRLELVGRGSYGAVYRGYHVKTGRVVALKVLNLDtDDDDVSDIQKEVALLSQLKLGqpkNIIKYYGSYLKGPSLWIIMD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd06917  83 YCEGGSIRTLMR-AGPIAERYIAVIMREVLVALKFIHKDGIIHRDIKAANILVTNTGNVKLCDFGVAASLNQNSSKRSTF 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaaVALKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGkWSAAFHNFI 251
Cdd:cd06917 162 VGTPYWMAPE---VITEGkYYDTKADIWSLGITTYEMATGNPPYSDVDALRAVMLIPKS--KPPRLEGNG-YSPLLKEFV 235
                       250       260
                ....*....|....*....|....*
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06917 236 AACLDEEPKDRLSADELLKSKWIKQ 260
STKc_myosinIIIA_N cd06638
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze ...
12-274 6.44e-73

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132969 [Multi-domain]  Cd Length: 286  Bit Score: 240.30  E-value: 6.44e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMvkMEPDDDV-STLQKEILILKTCR-HANIVAYHGSYLWLQ---- 85
Cdd:cd06638  15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKI--LDPIHDIdEEIEAEYNILKALSdHPNVVKFYGMYYKKDvkng 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 -KLWICMEFCGAGSLQDIyqVTGSL------SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI 158
Cdd:cd06638  93 dQLWLVLELCNGGSVTDL--VKGFLkrgermEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 SAQIGATLARRLSFIGTPYWMAPEVAAV--ALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPR 236
Cdd:cd06638 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACeqQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PPPT 248
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  237 LKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06638 249 LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
STKc_TAO cd06607
Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs ...
17-276 3.13e-72

Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270784 [Multi-domain]  Cd Length: 258  Bit Score: 237.35  E-value: 3.13e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKmvKMEPDDDVST-----LQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06607   3 FEDLREIGHGSFGAVYYARNKRTSEVVAIK--KMSYSGKQSTekwqdIIKEVKFLRQLRHPNTIEYKGCYLREHTAWLVM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCgAGSLQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGiSAQIGATLArrl 170
Cdd:cd06607  81 EYC-LGSASDIVEVhKKPLQEVEIAAICHGALQGLAYLHSHNRIHRDVKAGNILLTEPGTVKLADFG-SASLVCPAN--- 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEkGKWSAAFHNF 250
Cdd:cd06607 156 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLSS-GEWSDDFRNF 232
                       250       260
                ....*....|....*....|....*.
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06607 233 VDSCLQKIPQDRPSAEDLLKHPFVTR 258
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
23-274 9.15e-71

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 233.57  E-value: 9.15e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPD--DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd06606   8 LGKGSFGSVYLALNLDTGELMAVKEVELSGDseEELEALEREIRILSSLKHPNIVRYLGTERTENTLNIFLEYVPGGSLA 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG--ATLARRLSFIGTPYW 178
Cdd:cd06606  88 SLLKKFGKLPEPVVRKYTRQILEGLEYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLAeiATGEGTKSLRGTPYW 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  179 MAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVH-PLRVLFLMTKSGyQPPRLKEKGkwSAAFHNFIKVTLTK 257
Cdd:cd06606 168 MAPE---VIRGEGYGRAADIWSLGCTVIEMATGKPPWSELGnPVAALFKIGSSG-EPPPIPEHL--SEEAKDFLRKCLQR 241
                       250
                ....*....|....*..
gi 6005810  258 SPKKRPSATKMLSHQLV 274
Cdd:cd06606 242 DPKKRPTADELLQHPFL 258
STKc_myosinIIIB_N cd06639
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze ...
12-274 2.43e-68

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. They may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270808 [Multi-domain]  Cd Length: 291  Bit Score: 228.34  E-value: 2.43e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMvkMEPDDDV-STLQKEILILKTC-RHANIVAYHGSYLWLQK--- 86
Cdd:cd06639  19 DPSDTWDIIETIGKGTYGKVYKVTNKKDGSLAAVKI--LDPISDVdEEIEAEYNILRSLpNHPNVVKFYGMFYKADQyvg 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 --LWICMEFCGAGSLQD----IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA 160
Cdd:cd06639  97 gqLWLVLELCNGGSVTElvkgLLKCGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 QIGATLARRLSFIGTPYWMAPEVAAVALK--GGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLK 238
Cdd:cd06639 177 QLTSARLRRNTSVGTPFWMAPEVIACEQQydYSYDARCDVWSLGITAIELADGDPPLFDMHPVKALFKIPRN--PPPTLL 254
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  239 EKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06639 255 NPEKWCRGFSHFISQCLIKDFEKRPSVTHLLEHPFI 290
STKc_PAK_I cd06647
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze ...
12-274 3.55e-67

Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270814 [Multi-domain]  Cd Length: 261  Bit Score: 224.04  E-value: 3.55e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06647   4 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd06647  84 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFI 251
Cdd:cd06647 163 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFL 237
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06647 238 NRCLEMDVEKRGSAKELLQHPFL 260
PKc_MAPKK_plant_like cd06623
Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and ...
15-274 3.18e-66

Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis; MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling; MKK2 is involved in cold and salt stress signaling; MKK4/MKK5 participates in innate immunity; and MKK7 regulates basal and systemic acquired resistance. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132954 [Multi-domain]  Cd Length: 264  Bit Score: 221.31  E-value: 3.18e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06623   1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFrKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK-IHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd06623  81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHiIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFI 251
Cdd:cd06623 161 VGTVTYMSPE----RIQGEsYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI 236
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06623 237 SACLQKDPKKRPSAAELLQHPFI 259
STKc_PAK_II cd06648
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze ...
12-274 2.39e-65

Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270815 [Multi-domain]  Cd Length: 261  Bit Score: 218.85  E-value: 2.39e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06648   4 DPRSDLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIyqVT-GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd06648  84 EFLEGGALTDI--VThTRMNEEQIATVCRAVLKALSFLHSQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGKWSAAFHNF 250
Cdd:cd06648 162 SLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--EPPKLKNLHKVSPRLRSF 236
                       250       260
                ....*....|....*....|....
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06648 237 LDRMLVRDPAQRATAAELLNHPFL 260
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
21-274 3.49e-64

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 215.73  E-value: 3.49e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD-----VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06632   6 QLLGSGSFGSVYEGFNGDTGDFFAVKEVSLVDDDKksresVKQLEQEIALLSKLRHPNIVQYYGTEREEDNLYIFLEYVP 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgATLARRLSFIGT 175
Cdd:cd06632  86 GGSIHKLLQRYGAFEEPVIRLYTRQILSGLAYLHSRNTVHRDIKGANILVDTNGVVKLADFGMAKHV-EAFSFAKSFKGS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaaVALKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPP---RLKEKGKwsaafhNFI 251
Cdd:cd06632 165 PYWMAPEV--IMQKNsGYGLAVDIWSLGCTVLEMATGKPPWSQYEGVAAIFKIGNSGELPPipdHLSPDAK------DFI 236
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06632 237 RLCLQRDPEDRPTASQLLEHPFV 259
STKc_TAO3 cd06633
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze ...
5-274 5.83e-63

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO3 is also known as JIK (c-Jun N-terminal kinase inhibitory kinase) or KFC (kinase from chicken). It specifically activates JNK, presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270803 [Multi-domain]  Cd Length: 313  Bit Score: 214.52  E-value: 5.83e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    5 DPDI----FNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAY 77
Cdd:cd06633   7 DPEIadlfYKDDPEEIFVDLHEIGHGSFGAVYFATNSHTNEVVAIKKMSYSGKQTNEKWQdiiKEVKFLQQLKHPNTIEY 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCgAGSLQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADF 156
Cdd:cd06633  87 KGCYLKDHTAWLVMEYC-LGSASDLLEVhKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADF 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GiSAQIGATLArrlSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPR 236
Cdd:cd06633 166 G-SASIASPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  237 LkEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06633 240 L-QSNEWTDSFRGFVDYCLQKIPQERPSSAELLRHDFV 276
STKc_PAK6 cd06659
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the ...
3-281 9.29e-63

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. PAK6 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270821 [Multi-domain]  Cd Length: 297  Bit Score: 213.31  E-value: 9.29e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    3 VVDPDifnrDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL 82
Cdd:cd06659  13 VVDQG----DPRQLLENYVKIGEGSTGVVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHPNVVEMYKSYL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd06659  89 VGEELWVLMEYLQGGALTDIVSQT-RLNEEQIATVCEAVLQALAYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGK 242
Cdd:cd06659 168 SKDVPKRKSLVGTPYWMAPEVIS---RCPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--PPPKLKNSHK 242
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNR 281
Cdd:cd06659 243 ASPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE 281
STKc_PAK1 cd06654
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the ...
12-274 4.51e-62

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. PAK1 belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270820 [Multi-domain]  Cd Length: 296  Bit Score: 211.51  E-value: 4.51e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06654  17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd06654  97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFI 251
Cdd:cd06654 176 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFL 250
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06654 251 NRCLEMDVEKRGSAKELLQHQFL 273
PKc_MAPKK cd06605
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase ...
15-276 1.49e-61

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAPK, which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPKK kinase (MAPKKK or MKKK or MAP3K). There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270782 [Multi-domain]  Cd Length: 265  Bit Score: 208.74  E-value: 1.49e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDddvSTLQKEIL----ILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd06605   1 DDLEYLGELGEGNGGVVSKVRHRPSGQIMAVKVIRLEID---EALQKQILreldVLHKCNSPYIVGFYGAFYSEGDISIC 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLArr 169
Cdd:cd06605  78 MEYMDGGSLDKILKEVGRIPERILGKIAVAVVKGLIYLHEKHKIiHRDVKPSNILVNSRGQVKLCDFGVSGQLVDSLA-- 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQ---PPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSA 245
Cdd:cd06605 156 KTFVGTRSYMAPE----RISGGkYTVKSDIWSLGLSLVELATGRfpyPPPNAKPSMMIFELLSYIVDEPPPLLPSGKFSP 231
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06605 232 DFQDFVSQCLQKDPTERPSYKELMEHPFIKR 262
STKc_TAO1 cd06635
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze ...
5-274 1.08e-60

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. TAO proteins possess MAPK kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270805 [Multi-domain]  Cd Length: 317  Bit Score: 208.37  E-value: 1.08e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    5 DPDI----FNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAY 77
Cdd:cd06635  11 DPDIaelfFKEDPEKLFSDLREIGHGSFGAVYFARDVRTSEVVAIKKMSYSGKQSNEKWQdiiKEVKFLQRIKHPNSIEY 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCgAGSLQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADF 156
Cdd:cd06635  91 KGCYLREHTAWLVMEYC-LGSASDLLEVhKKPLQEIEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADF 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GiSAQIGATLArrlSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPR 236
Cdd:cd06635 170 G-SASIASPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPT 243
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  237 LkEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06635 244 L-QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280
STKc_TAO2 cd06634
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze ...
5-274 2.30e-60

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 possesses mitogen-activated protein kinase (MAPK) kinase kinase activity and activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating their respective MAP/ERK kinases, MEK3/MEK6 and MKK4/MKK7. It contains a long C-terminal extension with autoinhibitory segments, and is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor, interleukin 1, and Toll-like receptor. The TAO2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270804 [Multi-domain]  Cd Length: 308  Bit Score: 207.18  E-value: 2.30e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    5 DPDI----FNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM---EPDDDVSTLQKEILILKTCRHANIVAY 77
Cdd:cd06634   1 DPEVaelfFKDDPEKLFSDLREIGHGSFGAVYFARDVRNNEVVAIKKMSYsgkQSNEKWQDIIKEVKFLQKLRHPNTIEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCgAGSLQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADF 156
Cdd:cd06634  81 RGCYLREHTAWLVMEYC-LGSASDLLEVhKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDVKAGNILLTEPGLVKLGDF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GiSAQIgatLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPR 236
Cdd:cd06634 160 G-SASI---MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPA 233
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  237 LkEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06634 234 L-QSGHWSEYFRNFVDSCLQKIPQDRPTSDVLLKHRFL 270
STKc_Nek cd08215
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; ...
16-274 3.33e-60

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270855 [Multi-domain]  Cd Length: 258  Bit Score: 205.00  E-value: 3.33e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALK---MVKMEPDDDVSTLQkEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd08215   1 KYEKIRVIGKGSFGSAYLVRRKSDGKLYVLKeidLSNMSEKEREEALN-EVKLLSKLKHPNIVKYYESFEENGKLCIVME 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIY----QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT--L 166
Cdd:cd08215  80 YADGGDLAQKIkkqkKKGQPFPEEQILDWFVQICLALKYLHSRKILHRDLKTQNIFLTKDGVVKLGDFGISKVLESTtdL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARrlSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyQPPRLKEkgKWSA 245
Cdd:cd08215 160 AK--TVVGTPYYLSPEL----CENkPYNYKSDIWALGCVLYELCTLKHP-FEANNLPALVYKIVKG-QYPPIPS--QYSS 229
                       250       260
                ....*....|....*....|....*....
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08215 230 ELRDLVNSMLQKDPEKRPSANEILSSPFI 258
PKc_Pek1_like cd06621
Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
20-271 4.57e-60

Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates Pmk1/Spm1 and is regulated by the MAPKK kinase Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKK kinase Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270793 [Multi-domain]  Cd Length: 287  Bit Score: 205.73  E-value: 4.57e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVstlQKEIL----ILKTCRHANIVAYHGSYLWLQK--LWICMEF 93
Cdd:cd06621   6 LSSLGEGAGGSVTKCRLRNTKTIFALKTITTDPNPDV---QKQILreleINKSCASPYIVKYYGAFLDEQDssIGIAMEY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQ----VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARr 169
Cdd:cd06621  83 CEGGSLDSIYKkvkkKGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG- 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 lSFIGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPL-----FDVHPLRVL-FLMTKSgyqPPRLKE--- 239
Cdd:cd06621 162 -TFTGTSYYMAPE----RIQGGpYSITSDVWSLGLTLLEVAQNRFPFppegePPLGPIELLsYIVNMP---NPELKDepe 233
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  240 -KGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06621 234 nGIKWSESFKDFIEKCLEKDGTRRPGPWQMLAH 266
STKc_PAK3 cd06656
Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine ...
12-271 6.54e-60

Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation.


Pssm-ID: 132987 [Multi-domain]  Cd Length: 297  Bit Score: 205.73  E-value: 6.54e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06656  16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd06656  96 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFI 251
Cdd:cd06656 175 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPERLSAVFRDFL 249
                       250       260
                ....*....|....*....|
gi 6005810  252 KVTLTKSPKKRPSATKMLSH 271
Cdd:cd06656 250 NRCLEMDVDRRGSAKELLQH 269
STKc_MEKK3_like cd06625
Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) ...
23-274 1.45e-59

Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MEKK3, MEKK2, and related proteins; all contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKK) that activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270795 [Multi-domain]  Cd Length: 260  Bit Score: 203.36  E-value: 1.45e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-----DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd06625   8 LGQGAFGQVYLCYDADTGRELAVKQVEIDPINteaskEVKALECEIQLLKNLQHERIVQYYGCLQDEKSLSIFMEYMPGG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA--TLARRLSFIGT 175
Cdd:cd06625  88 SVKDEIKAYGALTENVTRKYTRQILEGLAYLHSNMIVHRDIKGANILRDSNGNVKLGDFGASKRLQTicSSTGMKSVTGT 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFlmtKSGYQPPRLKEKGKWSAAFHNFIKVT 254
Cdd:cd06625 168 PYWMSPEV----INGeGYGRKADIWSVGCTVVEMLTTKPPWAEFEPMAAIF---KIATQPTNPQLPPHVSEDARDFLSLI 240
                       250       260
                ....*....|....*....|
gi 6005810  255 LTKSPKKRPSATKMLSHQLV 274
Cdd:cd06625 241 FVRNKKQRPSAEELLSHSFV 260
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
23-271 6.12e-59

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 199.80  E-value: 6.12e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD 101
Cdd:cd00180   1 LGKGSFGKVYKARDKETGKKVAVKVIpKEKLKKLLEELLREIEILKKLNHPNIVKLYDVFETENFLYLVMEYCEGGSLKD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 -IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA--TLARRLSFIGTPYW 178
Cdd:cd00180  81 lLKENKGPLSEEEALSILRQLLSALEYLHSNGIIHRDLKPENILLDSDGTVKLADFGLAKDLDSddSLLKTTGGTTPPYY 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  179 MAPEvaaVALKGGYNELCDIWSLGITAIELAELQpplfdvhplrvlflmtksgyqpprlkekgkwsaafhNFIKVTLTKS 258
Cdd:cd00180 161 APPE---LLGGRYYGPKVDIWSLGVILYELEELK------------------------------------DLIRRMLQYD 201
                       250
                ....*....|...
gi 6005810  259 PKKRPSATKMLSH 271
Cdd:cd00180 202 PKKRPSAKELLEH 214
STKc_PAK2 cd06655
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the ...
12-271 1.04e-58

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. It belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132986 [Multi-domain]  Cd Length: 296  Bit Score: 202.26  E-value: 1.04e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd06655  16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd06655  96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqPPRLKEKGKWSAAFHNFI 251
Cdd:cd06655 175 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSPIFRDFL 249
                       250       260
                ....*....|....*....|
gi 6005810  252 KVTLTKSPKKRPSATKMLSH 271
Cdd:cd06655 250 NRCLEMDVEKRGSAKELLQH 269
STKc_CAMK cd05117
The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of ...
16-272 2.14e-54

The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. CAMKIV is implicated in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors, as well as in T-cell development and signaling. The CAMK family also consists of other related kinases including the Phosphorylase kinase Gamma subunit (PhKG), the C-terminal kinase domains of Ribosomal S6 kinase (RSK) and Mitogen and stress-activated kinase (MSK), Doublecortin-like kinase (DCKL), and the MAPK-activated protein kinases MK2, MK3, and MK5, among others. The CAMK family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270687 [Multi-domain]  Cd Length: 258  Bit Score: 188.84  E-value: 2.14e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd05117   1 KYELGKVLGRGSFGVVRLAVHKKTGEEYAVKIIdkKKLKSEDEEMLRREIEILKRLDHPNIVKLYEVFEDDKNLYLVMEL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAQIGATLARRl 170
Cdd:cd05117  81 CTGGELFDRIVKKGSFSEREAAKIMKQILSAVAYLHSQGIVHRDLKPENILLaskDPDSPIKIIDFGLAKIFEEGEKLK- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVaavaLKG-GYNELCDIWSLG-ITAIELAElQPPlFDVHPLRVLFLMTKSG---YQPPRLKEKgkwSA 245
Cdd:cd05117 160 TVCGTPYYVAPEV----LKGkGYGKKCDIWSLGvILYILLCG-YPP-FYGETEQELFEKILKGkysFDSPEWKNV---SE 230
                       250       260
                ....*....|....*....|....*..
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd05117 231 EAKDLIKRLLVVDPKKRLTAAEALNHP 257
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
16-265 1.29e-53

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 186.64  E-value: 1.29e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14014   1 RYRLVRLLGRGGMGEVYRARDTLLGRPVAIKVLRPELAEDeefRERFLREARALARLSHPNIVRVYDVGEDDGRPYIVME 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG-ATLARRLS 171
Cdd:cd14014  81 YVEGGSLADLLRERGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLTEDGRVKLTDFGIARALGdSGLTQTGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKwSAAFHNFI 251
Cdd:cd14014 161 VLGTPAYMAPE---QARGGPVDPRSDIYSLGVVLYELLTGRPPFDGDSPAAVLAKHLQEAPPPPSPLNPDV-PPALDAII 236
                       250
                ....*....|....
gi 6005810  252 KVTLTKSPKKRPSA 265
Cdd:cd14014 237 LRALAKDPEERPQS 250
STKc_PAK5 cd06658
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the ...
3-278 1.80e-53

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. PAK5 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132989 [Multi-domain]  Cd Length: 292  Bit Score: 187.55  E-value: 1.80e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    3 VVDPDifnrDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL 82
Cdd:cd06658  14 VVSPG----DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd06658  90 VGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGK 242
Cdd:cd06658 169 SKEVPKRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN--LPPRVKDSHK 243
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPG 278
Cdd:cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279
STKc_PAK4 cd06657
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the ...
3-278 2.01e-53

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. PAK4 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132988 [Multi-domain]  Cd Length: 292  Bit Score: 187.54  E-value: 2.01e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    3 VVDPDifnrDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL 82
Cdd:cd06657  12 VVDPG----DPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd06657  88 VGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSgyQPPRLKEKGK 242
Cdd:cd06657 167 SKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--LPPKLKNLHK 241
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPG 278
Cdd:cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277
STKc_YSK4 cd06631
Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs ...
23-274 6.44e-53

Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270801 [Multi-domain]  Cd Length: 266  Bit Score: 184.95  E-value: 6.44e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvSGDLVALKMVKMEPDDDVST------LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd06631   9 LGKGAYGTVYCGLTS-TGQLIAVKQVELDTSDKEKAekeyekLQEEVDLLKTLKHVNIVGYLGTCLEDNVVSIFMEFVPG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsaqigatlARRL------ 170
Cdd:cd06631  88 GSIASILARFGALEEPVFCRYTKQILEGVAYLHNNNVIHRDIKGNNIMLMPNGVIKLIDFGC--------AKRLcinlss 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 --------SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgK 242
Cdd:cd06631 160 gsqsqllkSMRGTPYWMAPEVIN---ETGHGRKSDIWSIGCTVFEMATGKPPWADMNPMAAIFAIGSGRKPVPRLPD--K 234
                       250       260       270
                ....*....|....*....|....*....|..
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06631 235 FSPEARDFVHACLTRDQDERPSAEQLLKHPFI 266
CNH pfam00780
CNH domain; Domain found in NIK1-like kinase, mouse citron and yeast ROM1, ROM2. Unpublished ...
511-796 5.33e-50

CNH domain; Domain found in NIK1-like kinase, mouse citron and yeast ROM1, ROM2. Unpublished observations.


Pssm-ID: 459938  Cd Length: 261  Bit Score: 176.67  E-value: 5.33e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    511 DQHLLLGAEEGIFILNRNDQeATLEMLF-PSRTTWVYSIN--NVLMSLSGKTPHLYSHSILGLLERKEtragnpiahisp 587
Cdd:pfam00780   2 GQNLLLGTEEGLYVLNRSGP-REPVRIIdKKRVTQLAVLEefNLLLLLSGKDKRLYVYPLSALDSREE------------ 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    588 hrlLARKNMVSTKIQDTKGCRACCVaeGASSGGPFLCGALETSVVLLQWYQP-MNKFLLVRQvlFPLPTPLSVFALLTGp 666
Cdd:pfam00780  69 ---NDRKDAAKNKLPETKGCHFFKV--GRHSNGRFLVVAVKRTIKLLEWYEPlLDKFRKFKE--FYLPSPPVSIELLKS- 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    667 gselpAVCIGVSPGrpgksvlFHTVRFGALSCWLGEMST------EHRGPVQVTQVEEDMVMVLMDGSVKLVTPEGSPVR 740
Cdd:pfam00780 141 -----KLCVGCAKG-------FEIVSLDSKATESLLTSLlfanrqENLKPLAVVRLDRSEFLLCYNEFGVYVNLQGRRSR 208
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810    741 glrTPEIPMTEAVEAVAMVGGQLQAFWKHGVQVWALGSDQLLQELRDPTLTFRLLG 796
Cdd:pfam00780 209 ---PWEIEWEGAPEAVAYLYPYLLAFHDNFIEIRDVETGELVQEIAGRKIRFLNSG 261
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
23-264 2.02e-48

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 171.57  E-value: 2.02e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd13999   1 IGSGSFGEVYKGKWR--GTDVAIKKLKVEDDNDelLKEFRREVSILSKLRHPNIVQFIGACLSPPPLCIVTEYMPGGSLY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQ-VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWM 179
Cdd:cd13999  79 DLLHkKKIPLSWSLRLKIALDIARGMNYLHSPPIIHRDLKSLNILLDENFTVKIADFGLSRIKNSTTEKMTGVVGTPRWM 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVaavaLKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgkWSAAFHNFIKVTLTKS 258
Cdd:cd13999 159 APEV----LRGEpYTEKADVYSFGIVLWELLTGEVPFKELSPIQIAAAVVQKGLRPPIPPD---CPPELSKLIKRCWNED 231

                ....*.
gi 6005810  259 PKKRPS 264
Cdd:cd13999 232 PEKRPS 237
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
14-474 7.22e-48

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 177.51  E-value: 7.22e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTL---QKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:COG0515   6 LGRYRILRLLGRGGMGVVYLARDLRLGRPVALKVLRPELAADPEARerfRREARALARLNHPNIVRVYDVGEEDGRPYLV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG-ATLARR 169
Cdd:COG0515  86 MEYVEGESLADLLRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIARALGgATLTQT 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHN 249
Cdd:COG0515 166 GTVVGTPGYMAPEQAR---GEPVDPRSDVYSLGVTLYELLTGRPP-FDGDSPAELLRAHLREPPPPPSELRPDLPPALDA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSHQLVSQPGLNRGLILDLLDKLKNPGKGPSIGDIEDEEPELPPAIPRRIRSTHRSSSLGI 329
Cdd:COG0515 242 IVLRALAKDPEERYQSAAELAAALRAVLRSLAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 321
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  330 PDADCCRRHMEFRKLRGMETRPPANTARLQPPRDLRSSSPRKQLSESSDDDYDDVDIPTPAEDTPPPLPPKPKFRSPSDE 409
Cdd:COG0515 322 APAAAAAAAAAAAALAAAAAAAAAAAAAALLAAAAALAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAALA 401
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  410 GPGSMGDDGQLSPGVLVRCASGPPPNSPRPGPPPSTSSPHLTAHSEPSLWNPPSRELDKPPLLPP 474
Cdd:COG0515 402 AAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAARLLAAAAAAAAAAAAAPLLAALLA 466
STKc_STK36 cd14002
Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the ...
15-274 1.15e-47

Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK36, also called Fused (or Fu) kinase, is involved in the Hedgehog signaling pathway. It is activated by the Smoothened (SMO) signal transducer, resulting in the stabilization of GLI transcription factors and the phosphorylation of SUFU to facilitate the nuclear accumulation of GLI. In Drosophila, Fused kinase is maternally required for proper segmentation during embryonic development and for the development of legs and wings during the larval stage. In mice, STK36 is not necessary for embryonic development, although mice deficient in STK36 display growth retardation postnatally. The STK36 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270904 [Multi-domain]  Cd Length: 253  Bit Score: 169.74  E-value: 1.15e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14002   1 ENYHVLELIGEGSFGKVYKGRRKYTGQVVALKFIpkRGKSEKELRNLRQEIEILRKLNHPNIIEMLDSFETKKEFVVVTE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FcGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARRLSF 172
Cdd:cd14002  81 Y-AQGELFQILEDDGTLPEEEVRSIAKQLVSALHYLHSNRIIHRDMKPQNILIGKGGVVKLCDFG--------FARAMSC 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 -------I-GTPYWMAPEVaaVALKgGYNELCDIWSLGITAIELAELQPPLFdvhplrvlflmTKSGYQPPRL--KEKGK 242
Cdd:cd14002 152 ntlvltsIkGTPLYMAPEL--VQEQ-PYDHTADLWSLGCILYELFVGQPPFY-----------TNSIYQLVQMivKDPVK 217
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  243 W----SAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14002 218 WpsnmSPEFKSFLQGLLNKDPSKRLSWPDLLEHPFV 253
STKc_Byr2_like cd06628
Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein ...
23-274 5.21e-47

Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. The Byr2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270798 [Multi-domain]  Cd Length: 267  Bit Score: 168.48  E-value: 5.21e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---------VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06628   8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSAenkdrkksmLDALQREIALLRELQHENIVQYLGSSSDANHLNIFLEY 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL------A 167
Cdd:cd06628  88 VPGGSVATLLNNYGAFEESLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSlstknnG 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQ--PPRLKEKGKwsa 245
Cdd:cd06628 168 ARPSLQGSVFWMAPEVVKQTS---YTRKADIWSLGCLVVEMLTGTHPFPDCTQMQAIFKIGENASPtiPSNISSEAR--- 241
                       250       260
                ....*....|....*....|....*....
gi 6005810  246 afhNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06628 242 ---DFLEKTFEIDHNKRPTADELLKHPFL 267
STKc_AMPK-like cd14003
Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze ...
16-271 8.02e-47

Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AMPK-like subfamily is composed of AMPK, MARK, BRSK, NUAK, MELK, SNRK, TSSK, and SIK, among others. LKB1 serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. BRSKs play important roles in establishing neuronal polarity. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. The AMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270905 [Multi-domain]  Cd Length: 252  Bit Score: 167.31  E-value: 8.02e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14003   1 NYELGKTLGEGSFGKVKLARHKLTGEKVAIKIIDKSklKEEIEEKIKREIEIMKLLNHPNIIKLYEVIETENKIYLVMEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgaTLARRL-SF 172
Cdd:cd14003  81 ASGGELFDYIVNNGRLSEDEARRFFQQLISAVDYCHSNGIVHRDLKLENILLDKNGNLKIIDFGLSNEF--RGGSLLkTF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVaavaLKG-GYN-ELCDIWSLGIT--AIELAELqPplFDVHPLRVLFLMTKSG--YQPPRLkekgkwSAA 246
Cdd:cd14003 159 CGTPAYAAPEV----LLGrKYDgPKADVWSLGVIlyAMLTGYL-P--FDDDNDSKLFRKILKGkyPIPSHL------SPD 225
                       250       260
                ....*....|....*....|....*
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14003 226 ARDLIRRMLVVDPSKRITIEEILNH 250
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
16-272 1.01e-46

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 167.27  E-value: 1.01e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP--DDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14007   1 DFEIGKPLGKGKFGNVYLAREKKSGFIVALKVISKSQlqKSGLEHqLRREIEIQSHLRHPNILRLYGYFEDKKRIYLILE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlaRRLSF 172
Cdd:cd14007  81 YAPNGELYKELKKQKRFDEKEAAKYIYQLALALDYLHSKNIIHRDIKPENILLGSNGELKLADFGWSVHAPSN--RRKTF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyqppRLKEKGKWSAAFHNFIK 252
Cdd:cd14007 159 CGTLDYLPPE---MVEGKEYDYKVDIWSLGVLCYELLVGKPP-FESKSHQETYKRIQNV----DIKFPSSVSPEAKDLIS 230
                       250       260
                ....*....|....*....|
gi 6005810  253 VTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14007 231 KLLQKDPSKRLSLEQVLNHP 250
PKc_Byr1_like cd06620
Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; ...
20-276 1.34e-46

Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKK kinase Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The Byr-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270792 [Multi-domain]  Cd Length: 286  Bit Score: 168.00  E-value: 1.34e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDddvSTLQKEIL----ILKTCRHANIVAYHGSYLW-LQKLWICMEFC 94
Cdd:cd06620  10 LKDLGAGNGGSVSKVLHIPTGTIMAKKVIHIDAK---SSVRKQILrelqILHECHSPYIVSFYGAFLNeNNNIIICMEYM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARrlSFI 173
Cdd:cd06620  87 DCGSLDKILKKKGPFPEEVLGKIAVAVLEGLTYLYNVHRIiHRDIKPSNILVNSKGQIKLCDFGVSGELINSIAD--TFV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPLFD--------VHPLRVLFLMTKSGYQP-PRLKEKGKW 243
Cdd:cd06620 165 GTSTYMSPE----RIQGGkYSVKSDVWSLGLSIIELALGEFPFAGsnddddgyNGPMGILDLLQRIVNEPpPRLPKDRIF 240
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06620 241 PKDLRDFVDRCLLKDPRERPSPQLLLDHDPFIQ 273
STKc_MEKK4 cd06626
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
21-271 3.13e-46

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK4 is a MAPK kinase kinase that phosphorylates and activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270796 [Multi-domain]  Cd Length: 265  Bit Score: 166.32  E-value: 3.13e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd06626   6 NKIGEGTFGKVYTAVNLDTGELMAMKEIRFQDNDPktIKEIADEMKVLEGLDHPNLVRYYGVEVHREEVYIFMEYCQEGT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRL---SFI 173
Cdd:cd06626  86 LEELLRHGRILDEAVIRVYTLQLLEGLAYLHENGIVHRDIKPANIFLDSNGLIKLGDFGSAVKLknNTTTMAPGevnSLV 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDV-HPLRVLFlmtKSGY-QPPRLKEKGKWSAAFHNFI 251
Cdd:cd06626 166 GTPAYMAPEVITGNKGEGHGRAADIWSLGCVVLEMATGKRPWSELdNEWAIMY---HVGMgHKPPIPDSLQLSPEGKDFL 242
                       250       260
                ....*....|....*....|
gi 6005810  252 KVTLTKSPKKRPSATKMLSH 271
Cdd:cd06626 243 SRCLESDPKKRPTASELLDH 262
STKc_MEKK3_like_u1 cd06653
Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP) ...
23-274 3.19e-46

Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized proteins with similarity to MEKK3, MEKK2, and related proteins; they contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKKs), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270819 [Multi-domain]  Cd Length: 264  Bit Score: 166.35  E-value: 3.19e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPD-----DDVSTLQKEILILKTCRHANIVAYHGSYL--WLQKLWICMEFCG 95
Cdd:cd06653  10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDsqetsKEVNALECEIQLLKNLRHDRIVQYYGCLRdpEEKKLSIFVEYMP 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgATLARR----LS 171
Cdd:cd06653  90 GGSVKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI-QTICMSgtgiKS 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFlmtKSGYQP--PRLKEKGkwSAAFH 248
Cdd:cd06653 169 VTGTPYWMSPEV----ISGeGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF---KIATQPtkPQLPDGV--SDACR 239
                       250       260
                ....*....|....*....|....*.
gi 6005810  249 NFIKVTLTKSpKKRPSATKMLSHQLV 274
Cdd:cd06653 240 DFLRQIFVEE-KRRPTAEFLLRHPFV 264
Pkinase pfam00069
Protein kinase domain;
17-271 8.67e-46

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 163.18  E-value: 8.67e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV--STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:pfam00069   1 YEVLRKLGSGSFGTVYKAKHRDTGKIVAIKKIKKEKIKKKkdKNILREIKILKKLNHPNIVRLYDAFEDKDNLYLVLEYV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSqkkihrdikganilindagevrladfgisaqigatlarRLSFIG 174
Cdd:pfam00069  81 EGGSLFDLLSEKGAFSEREAKFIMKQILEGLESGSS--------------------------------------LTTFVG 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    175 TPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgKWSAAFHNFIKV 253
Cdd:pfam00069 123 TPWYMAPEV----LGGnPYGPKVDVWSLGCILYELLTGKPPFPGINGNEIYELIIDQPYAFPELPS--NLSEEAKDLLKK 196
                         250
                  ....*....|....*...
gi 6005810    254 TLTKSPKKRPSATKMLSH 271
Cdd:pfam00069 197 LLKKDPSKRLTATQALQH 214
STKc_ASK cd06624
Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs ...
23-274 4.61e-45

Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs) and include ASK1, ASK2, and MAPKKK15. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270794 [Multi-domain]  Cd Length: 268  Bit Score: 162.96  E-value: 4.61e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd06624  16 LGKGTFGVVYAARDLSTQVRIAIKEIPERDSREVQPLHEEIALHSRLSHKNIVQYLGSVSEDGFFKIFMEQVPGGSLSAL 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVT-GSL--SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND-AGEVRLADFGISAQIGATLARRLSFIGTPYW 178
Cdd:cd06624  96 LRSKwGPLkdNENTIGYYTKQILEGLKYLHDNKIVHRDIKGDNVLVNTySGVVKISDFGTSKRLAGINPCTETFTGTLQY 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  179 MAPEVAAVALKgGYNELCDIWSLGITAIELAELQPPLFDV-HPLRVLFlmtKSGYQ------PPRLKEKGKwsaafhNFI 251
Cdd:cd06624 176 MAPEVIDKGQR-GYGPPADIWSLGCTIIEMATGKPPFIELgEPQAAMF---KVGMFkihpeiPESLSEEAK------SFI 245
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06624 246 LRCFEPDPDKRATASDLLQDPFL 268
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
17-269 7.48e-45

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 162.20  E-value: 7.48e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEpddDVSTLQK-----EILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd08529   2 FEILNKLGKGSFGVVYKVVRKVDGRVYALKQIDIS---RMSRKMReeaidEARVLSKLNSPYVIKYYDSFVDKGKLNIVM 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIY--QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARR 169
Cdd:cd08529  79 EYAENGDLHSLIksQRGRPLPEDQIWKFFIQTLLGLSHLHSKKILHRDIKSMNIFLDKGDNVKIGDLGVAKILSDTTNFA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRlkeKGKWSAAFHN 249
Cdd:cd08529 159 QTIVGTPYYLSPELCE---DKPYNEKSDVWALGCVLYELCTGKHP-FEAQNQGALILKIVRGKYPPI---SASYSQDLSQ 231
                       250       260
                ....*....|....*....|
gi 6005810  250 FIKVTLTKSPKKRPSATKML 269
Cdd:cd08529 232 LIDSCLTKDYRQRPDTTELL 251
STKc_Nek2 cd08217
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
16-274 1.50e-43

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Nek2 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. It The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270857 [Multi-domain]  Cd Length: 265  Bit Score: 158.86  E-value: 1.50e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMepdddvSTLQKEIL-----ILKTCRHANIVAYHGSYL--WLQ 85
Cdd:cd08217   1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIdygKM------SEKEKQQLvsevnILRELKHPNIVRYYDRIVdrANT 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAGSLQDI----YQVTGSLSELQISYVCREVLQGLAYLH-----SQKKIHRDIKGANILINDAGEVRLADF 156
Cdd:cd08217  75 TLYIVMEYCEGGDLAQLikkcKKENQYIPEEFIWKIFTQLLLALYECHnrsvgGGKILHRDLKPANIFLDSDNNVKLGDF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GISAQIGATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyQPPR 236
Cdd:cd08217 155 GLARVLSHDSSFAKTYVGTPYYMSPELLN---EQSYDEKSDIWSLGCLIYELCALHPP-FQAANQLELAKKIKEG-KFPR 229
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  237 LKEkgKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08217 230 IPS--RYSSELNEVIKSMLNVDPDKRPSVEELLQLPLI 265
STKc_MEKK2 cd06652
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
23-274 9.66e-43

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK2 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270818 [Multi-domain]  Cd Length: 264  Bit Score: 156.36  E-value: 9.66e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-----DVSTLQKEILILKTCRHANIVAYHGSYLWLQK--LWICMEFCG 95
Cdd:cd06652  10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESpetskEVNALECEIQLLKNLLHERIVQYYGCLRDPQErtLSIFMEYMP 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ---IGATLARRLSF 172
Cdd:cd06652  90 GGSIKDQLKSYGALTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRlqtICLSGTGMKSV 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFlmtKSGYQPPRLKEKGKWSAAFHNFIK 252
Cdd:cd06652 170 TGTPYWMSPEVIS---GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF---KIATQPTNPQLPAHVSDHCRDFLK 243
                       250       260
                ....*....|....*....|..
gi 6005810  253 VTLTKSpKKRPSATKMLSHQLV 274
Cdd:cd06652 244 RIFVEA-KLRPSADELLRHTFV 264
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
19-271 1.85e-42

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 155.35  E-value: 1.85e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     19 LLQRLGGGTYGEVFKARDKVSGD----LVALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:pfam07714   3 LGEKLGEGAFGEVYKGTLKGEGEntkiKVAVKTLKEGADEEEREdFLEEASIMKKLDHPNIVKLLGVCTQGEPLYIVTEY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     94 CGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:pfam07714  83 MPGGDLLDfLRKHKRKLTLKDLLSMALQIAKGMEYLESKNFVHRDLAARNCLVSENLVVKISDFGLSRDIYDDDYYRKRG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    173 IG-TPY-WMAPEVAAvalKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFlMTKSGYQPPRLKekgKWSAAFHN 249
Cdd:pfam07714 163 GGkLPIkWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLgEQPYPGMSNEEVLE-FLEDGYRLPQPE---NCPDELYD 235
                         250       260
                  ....*....|....*....|..
gi 6005810    250 FIKVTLTKSPKKRPSATKMLSH 271
Cdd:pfam07714 236 LMKQCWAYDPEDRPTFSELVED 257
STKc_CDK_like cd07829
Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs ...
17-271 5.65e-42

Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270823 [Multi-domain]  Cd Length: 282  Bit Score: 154.95  E-value: 5.65e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd07829   1 YEKLEKLGEGTYGVVYKAKDKKTGEIVALKKIRLDNEEEgipSTAL-REISLLKELKHPNIVKLLDVIHTENKLYLVFEY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGagslQDIYQV----TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARR 169
Cdd:cd07829  80 CD----QDLKKYldkrPGPLPPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNLLINRDGVLKLADFG--------LARA 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSF--------IGTPYWMAPEVaavaLKG--GYNELCDIWSLGitAIeLAEL--QPPLF----DVHPLRVLF--LMTKSG 231
Cdd:cd07829 148 FGIplrtytheVVTLWYRAPEI----LLGskHYSTAVDIWSVG--CI-FAELitGKPLFpgdsEIDQLFKIFqiLGTPTE 220
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  232 YQPPRLKEKGKWSAAFHNFIKVTLTK-------------------SPKKRPSATKMLSH 271
Cdd:cd07829 221 ESWPGVTKLPDYKPTFPKWPKNDLEKvlprldpegidllskmlqyNPAKRISAKEALKH 279
STKc_Bck1_like cd06629
Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein ...
21-271 1.21e-41

Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The Bck1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270799 [Multi-domain]  Cd Length: 270  Bit Score: 153.31  E-value: 1.21e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKMEP-----DDD-----VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd06629   7 ELIGKGTYGRVYLAMNATTGEMLAVKQVELPKtssdrADSrqktvVDALKSEIDTLKDLDHPNIVQYLGFEETEDYFSIF 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-------AQIG 163
Cdd:cd06629  87 LEYVPGGSIGSCLRKYGKFEEDLVRFFTRQILDGLAYLHSKGILHRDLKADNILVDLEGICKISDFGISkksddiyGNNG 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 ATLARrlsfiGTPYWMAPEVAAvALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPrLKEKGKW 243
Cdd:cd06629 167 ATSMQ-----GSVFWMAPEVIH-SQGQGYSAKVDIWSLGCVVLEMLAGRRPWSDDEAIAAMFKLGNKRSAPP-VPEDVNL 239
                       250       260
                ....*....|....*....|....*...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06629 240 SPEALDFLNACFAIDPRDRPTAAELLSH 267
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
17-272 1.37e-41

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 154.01  E-value: 1.37e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS--TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd07833   3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVkkTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL-SFI 173
Cdd:cd07833  83 ERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALTARPASPLtDYV 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQpPLF----DVHPL----RVLFLMTKSG-------------- 231
Cdd:cd07833 163 ATRWYRAPELLVGDTN--YGKPVDVWAIGCIMAELLDGE-PLFpgdsDIDQLyliqKCLGPLPPSHqelfssnprfagva 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  232 ----YQPPRLKEK--GKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd07833 240 fpepSQPESLERRypGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286
PK_STRAD cd08216
Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows ...
16-276 1.85e-41

Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270856 [Multi-domain]  Cd Length: 315  Bit Score: 154.38  E-value: 1.85e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYgeVFKARDKVSGDLVALKMVKMEPDD--DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd08216   3 LYEIGKCFKGGGV--VHLAKHKPTNTLVAVKKINLESDSkeDLKFLQQEILTSRQLQHPNILPYVTSFVVDNDLYVVTPL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDI---YQVTGsLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd08216  81 MAYGSCRDLlktHFPEG-LPELAIAFILRDVLNALEYIHSKGYIHRSVKASHILISGDGKVVLSGLRYAYSMVKHGKRQR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTP-------YWMAPEVAAVALKgGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF---------LMTKSGYQP 234
Cdd:cd08216 160 VVHDFPksseknlPWLSPEVLQQNLL-GYNEKSDIYSVGITACELANGVVPFSDMPATQMLLekvrgttpqLLDCSTYPL 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  235 P--RLKEKG-------------------KWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd08216 239 EedSMSQSEdsstehpnnrdtrdipyqrTFSEAFHQFVELCLQRDPELRPSASQLLAHSFFKQ 301
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
23-271 2.06e-41

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 152.32  E-value: 2.06e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQK---EILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL 99
Cdd:cd14099   9 LGKGGFAKCYEVTDMSTGKVYAGKVVPKSSLTKPKQREKlksEIKIHRSLKHPNIVKFHDCFEDEENVYILLELCSNGSL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWM 179
Cdd:cd14099  89 MELLKRRKALTEPEVRYFMRQILSGVKYLHSNRIIHRDLKLGNLFLDENMNVKIGDFGLAARLEYDGERKKTLCGTPNYI 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSG-YQPPrlkEKGKWSAAFHNFIKVTLTKS 258
Cdd:cd14099 169 APEV--LEKKKGHSFEVDIWSLGVILYTLLVGKPP-FETSDVKETYKRIKKNeYSFP---SHLSISDEAKDLIRSMLQPD 242
                       250
                ....*....|...
gi 6005810  259 PKKRPSATKMLSH 271
Cdd:cd14099 243 PTKRPSLDEILSH 255
STKc_CNK2-like cd08530
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar ...
17-274 4.26e-41

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. This subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270869 [Multi-domain]  Cd Length: 256  Bit Score: 151.39  E-value: 4.26e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM------EPDDDVStlqkEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd08530   2 FKVLKKLGKGSYGSVYKVKRLSDNQVYALKEVNLgslsqkEREDSVN----EIRLLASVNHPNIIRYKEAFLDGNRLCIV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSL---QDIYQVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd08530  78 MEYAPFGDLsklISKRKKKRRLfPEDDIWRIFIQMLRGLKALHDQKILHRDLKSANILLSAGDLVKIGDLGISKVLKKNL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARrlSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRlkeKGKWSA 245
Cdd:cd08530 158 AK--TQIGTPLYAAPEV----WKGrPYDYKSDIWSLGCLLYEMATFRPP-FEARTMQELRYKVCRGKFPPI---PPVYSQ 227
                       250       260
                ....*....|....*....|....*....
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08530 228 DLQQIIRSLLQVNPKKRPSCDKLLQSPAV 256
STKc_LKB1_CaMKK cd14008
Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent ...
23-271 4.72e-41

Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent Protein Kinase Kinase, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Both LKB1 and CaMKKs can phosphorylate and activate AMP-activated protein kinase (AMPK). LKB1, also called STK11, serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMPK. Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The LKB1/CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270910 [Multi-domain]  Cd Length: 267  Bit Score: 151.55  E-value: 4.72e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMV-----------------KMEPDDDVstlQKEILILKTCRHANIVAYHG--SYLW 83
Cdd:cd14008   1 LGRGSFGKVKLALDTETGQLYAIKIFnksrlrkrregkndrgkIKNALDDV---RREIAIMKKLDHPNIVRLYEviDDPE 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ 161
Cdd:cd14008  78 SDKLYLVLEYCEGGPVMELDSGDRVppLPEETARKYFRDLVLGLEYLHENGIVHRDIKPENLLLTADGTVKISDFGVSEM 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 IGATLARRLSFIGTPYWMAPEvaavALKGGYNELC----DIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRL 237
Cdd:cd14008 158 FEDGNDTLQKTAGTPAFLAPE----LCDGDSKTYSgkaaDIWALGVTLYCLVFGRLP-FNGDNILELYEAIQNQNDEFPI 232
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  238 keKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14008 233 --PPELSPELKDLLRRMLEKDPEKRITLKEIKEH 264
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
16-271 5.79e-40

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 148.39  E-value: 5.79e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14098   1 KYQIIDRLGSGTFAEVKKAVEVETGKMRAIKQIVkrkvAGNDKNLQLFQREINILKSLEHPGIVRLIDWYEDDQHIYLVM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLADFGISAQIGaTLARR 169
Cdd:cd14098  81 EYVEGGDLMDFIMAWGAIPEQHARELTKQILEAMAYTHSMGITHRDLKPENILItqDDPVIVKISDFGLAKVIH-TGTFL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEV---AAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGY-QPP----RLKEKG 241
Cdd:cd14098 160 VTFCGTMAYLAPEIlmsKEQNLQGGYSNLVDMWSVGCLVYVMLTGALPFDGSSQLPVEKRIRKGRYtQPPlvdfNISEEA 239
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  242 KwsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14098 240 I------DFILRLLDVDPEKRMTAAQALDH 263
STKc_CDK9_like cd07840
Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs ...
17-272 9.25e-40

Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270832 [Multi-domain]  Cd Length: 291  Bit Score: 148.87  E-value: 9.25e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCRHANIVAYHGsylwlqklwICMEF 93
Cdd:cd07840   1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEgfpITAI-REIKLLQKLDHPNVVRLKE---------IVTSK 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQV--------TG-------SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGi 158
Cdd:cd07840  71 GSAKYKGSIYMVfeymdhdlTGlldnpevKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFG- 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 saqigatLARRLSFIG---------TPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAeLQPPLF----DVHPLRV 223
Cdd:cd07840 150 -------LARPYTKENnadytnrviTLWYRPPEL----LLGAtrYGPEVDMWSVGCILAELF-TGKPIFqgktELEQLEK 217
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  224 LF-------------LMTKSGYQPPRLKE----------KGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd07840 218 IFelcgspteenwpgVSDLPWFENLKPKKpykrrlrevfKNVIDPSALDLLDKLLTLDPKKRISADQALQHE 289
STKc_Nek5 cd08225
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
17-269 1.19e-39

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Nek5 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173765 [Multi-domain]  Cd Length: 257  Bit Score: 147.41  E-value: 1.19e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd08225   2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTkmPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSL-QDIYQVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV-RLADFGISAQIGATLARRLS 171
Cdd:cd08225  82 DGGDLmKRINRQRGVLfSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVaKLGDFGIARQLNDSMELAYT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRlkeKGKWSAAFHNFI 251
Cdd:cd08225 162 CVGTPYYLSPEICQ---NRPYNNKTDIWSLGCVLYELCTLKHP-FEGNNLHQLVLKICQGYFAPI---SPNFSRDLRSLI 234
                       250
                ....*....|....*...
gi 6005810  252 KVTLTKSPKKRPSATKML 269
Cdd:cd08225 235 SQLFKVSPRDRPSITSIL 252
STKc_AGC cd05123
Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
23-268 1.55e-39

Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. The AGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase.


Pssm-ID: 270693 [Multi-domain]  Cd Length: 250  Bit Score: 146.89  E-value: 1.55e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYlwlQ---KLWICMEFCGA 96
Cdd:cd05123   1 LGKGSFGKVLLVRKKDTGKLYAMKVLRkkeIIKRKEVEHTLNERNILERVNHPFIVKLHYAF---QteeKLYLVLDYVPG 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:cd05123  78 GELFSHLSKEGRFPEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDSDGHIKLTDFGLAKELSSDGDRTYTFCGTP 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyqPPRLKEkgKWSAAFHNFIKVTLT 256
Cdd:cd05123 158 EYLAPE---VLLGKGYGKAVDWWSLGVLLYEMLTGKPP-FYAENRKEIYEKILKS--PLKFPE--YVSPEAKSLISGLLQ 229
                       250
                ....*....|..
gi 6005810  257 KSPKKRPSATKM 268
Cdd:cd05123 230 KDPTKRLGSGGA 241
STKc_MEKK3 cd06651
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
23-271 4.91e-39

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK3 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270817 [Multi-domain]  Cd Length: 271  Bit Score: 146.00  E-value: 4.91e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-----DVSTLQKEILILKTCRHANIVAYHGSYL--WLQKLWICMEFCG 95
Cdd:cd06651  15 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESpetskEVSALECEIQLLKNLQHERIVQYYGCLRdrAEKTLTIFMEYMP 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-----GATLARrl 170
Cdd:cd06651  95 GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLqticmSGTGIR-- 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPP---RLKEKGKwsaaf 247
Cdd:cd06651 173 SVTGTPYWMSPEVIS---GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQlpsHISEHAR----- 244
                       250       260
                ....*....|....*....|....
gi 6005810  248 hNFIKVTLTKSpKKRPSATKMLSH 271
Cdd:cd06651 245 -DFLGCIFVEA-RHRPSAEELLRH 266
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
17-266 9.07e-39

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 145.11  E-value: 9.07e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd08224   2 YEIEKKIGKGQFSVVYRARCLLDGRLVALKKVQIFEMMDAKARQdclKEIDLLQQLNHPNIIKYLASFIENNELNIVLEL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARR 169
Cdd:cd08224  82 ADAGDLSRLIKHFKKqkrlIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITANGVVKLGDLGLGRFFSSKTTAA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLF-DVHPLRVLF-LMTKSGYQPPRlkeKGKWSAA 246
Cdd:cd08224 162 HSLVGTPYYMSPER----IREqGYDFKSDIWSLGCLLYEMAALQSPFYgEKMNLYSLCkKIEKCEYPPLP---ADLYSQE 234
                       250       260
                ....*....|....*....|
gi 6005810  247 FHNFIKVTLTKSPKKRPSAT 266
Cdd:cd08224 235 LRDLVAACIQPDPEKRPDIS 254
PLN00034 PLN00034
mitogen-activated protein kinase kinase; Provisional
18-282 1.87e-38

mitogen-activated protein kinase kinase; Provisional


Pssm-ID: 215036 [Multi-domain]  Cd Length: 353  Bit Score: 146.89  E-value: 1.87e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    18 DLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:PLN00034  77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVrRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    97 GSLQDiyqvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:PLN00034 157 GSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTI 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   177 YWMAPEVAAVALKGGYNELC--DIWSLGITAIELAELQPPLF-----DVHPLRVLFLMTKSGYQPPRLkekgkwSAAFHN 249
Cdd:PLN00034 233 AYMSPERINTDLNHGAYDGYagDIWSLGVSILEFYLGRFPFGvgrqgDWASLMCAICMSQPPEAPATA------SREFRH 306
                        250       260       270
                 ....*....|....*....|....*....|...
gi 6005810   250 FIKVTLTKSPKKRPSATKMLSHQLVSQPGLNRG 282
Cdd:PLN00034 307 FISCCLQREPAKRWSAMQLLQHPFILRAQPGQG 339
STKc_CDK10 cd07845
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs ...
17-271 3.85e-38

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173742 [Multi-domain]  Cd Length: 309  Bit Score: 144.82  E-value: 3.85e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCRHANIVAYH----GSYLwlQKLWI 89
Cdd:cd07845   9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDgipISSL-REITLLLNLRHPNIVELKevvvGKHL--DSIFL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGagslQD----IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd07845  86 VMEYCE----QDlaslLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQP--------------------------PLFDVH 219
Cdd:cd07845 162 AKPMTPKVVTLWYRAPELLLGCTT--YTTAIDMWAVGCILAELLAHKPllpgkseieqldliiqllgtpnesiwPGFSDL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  220 PLRVLFLMTKSGYQppRLKEKGKW-SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07845 240 PLVGKFTLPKQPYN--NLKHKFPWlSEAGLRLLNFLLMYDPKKRATAEEALES 290
PKc_PBS2_like cd06622
Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
15-271 6.88e-38

Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. The PBS2 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132953 [Multi-domain]  Cd Length: 286  Bit Score: 143.07  E-value: 6.88e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06622   1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDEsKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIY---QVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARr 169
Cdd:cd06622  81 MDAGSLDKLYaggVATEGIPEDVLRRITYAVVKGLKFLKEEHNIiHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 lSFIGTPYWMAPE---VAAVALKGGYNELCDIWSLGITAIELAELQPPlfdvHPLRV---LF--LMTKSGYQPPRLKEkg 241
Cdd:cd06622 160 -TNIGCQSYMAPErikSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP----YPPETyanIFaqLSAIVDGDPPTLPS-- 232
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  242 KWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06622 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262
STKc_WNK cd13983
Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze ...
23-273 2.12e-37

Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNKs comprise a subfamily of STKs with an unusual placement of a catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. They are also involved in cell signaling, survival, proliferation, and organ development. WNKs are activated by hyperosmotic or low-chloride hypotonic stress and they function upstream of SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. There are four vertebrate WNKs which show varying expression patterns. WNK1 and WNK2 are widely expressed while WNK3 and WNK4 show a more restricted expression pattern. Because mutations in human WNK1 and WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension (due to increased sodium reabsorption) and hyperkalemia (due to impaired renal potassium secretion), there are more studies conducted on these two proteins, compared to WNK2 and WNK3. The WNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270885 [Multi-domain]  Cd Length: 258  Bit Score: 140.82  E-value: 2.12e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVA---LKMVKMEPDDdVSTLQKEILILKTCRHANIVAYHGSylWLQKLWICM----EFCG 95
Cdd:cd13983   9 LGRGSFKTVYRAFDTEEGIEVAwneIKLRKLPKAE-RQRFKQEIEILKSLKHPNIIKFYDS--WESKSKKEVifitELMT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDA-GEVRLADFGISAQIGATLARrlSF 172
Cdd:cd13983  86 SGTLKQYLKRFKRLKLKVIKSWCRQILEGLNYLHTRDPpiIHRDLKCDNIFINGNtGEVKIGDLGLATLLRQSFAK--SV 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELAELQPPLFD-VHPLRVlFLMTKSGYQPPRLkEKGKwSAAFHNFI 251
Cdd:cd13983 164 IGTPEFMAPEM----YEEHYDEKVDIYAFGMCLLEMATGEYPYSEcTNAAQI-YKKVTSGIKPESL-SKVK-DPELKDFI 236
                       250       260
                ....*....|....*....|..
gi 6005810  252 KVTLTKsPKKRPSATKMLSHQL 273
Cdd:cd13983 237 EKCLKP-PDERPSARELLEHPF 257
PKc_MKK3_6 cd06617
Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase ...
15-276 3.32e-37

Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase Kinases 3 and 6; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 play roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. The MKK3/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173729 [Multi-domain]  Cd Length: 283  Bit Score: 141.02  E-value: 3.32e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDddvSTLQKEILI-----LKTCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd06617   1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN---SQEQKRLLMdldisMRSVDCPYTVTFYGALFREGDVWI 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAgSLQDIY----QVTGSLSELQISYVCREVLQGLAYLHSQ-KKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd06617  78 CMEVMDT-SLDKFYkkvyDKGLTIPEDILGKIAVSIVKALEYLHSKlSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRLSFIGTPYwMAPEVAAVALKG-GYNELCDIWSLGITAIELAELQPPLFDVH-PLRVLFLMTKSgyQPPRLKEkGK 242
Cdd:cd06617 157 SVAKTIDAGCKPY-MAPERINPELNQkGYDVKSDVWSLGITMIELATGRFPYDSWKtPFQQLKQVVEE--PSPQLPA-EK 232
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266
STKc_CMGC cd05118
Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
17-272 8.98e-37

Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and other kinases. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Other members of the CMGC family include casein kinase 2 (CK2), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK), Glycogen Synthase Kinase 3 (GSK3), among many others. The CMGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270688 [Multi-domain]  Cd Length: 249  Bit Score: 138.91  E-value: 8.98e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLqKEILILK----TCRHANIVAYHGSYLW--LQKLWIC 90
Cdd:cd05118   1 YEVLRKIGEGAFGTVWLARDKVTGEKVAIKKIKNDFRHPKAAL-REIKLLKhlndVEGHPNIVKLLDVFEHrgGNHLCLV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAgSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADFGISAQIGATLAr 168
Cdd:cd05118  80 FELMGM-NLYELIKDYPRgLPLDLIKSYLYQLLQALDFLHSNGIIHRDLKPENILINlELGQLKLADFGLARSFTSPPY- 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 rLSFIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKS-GyqPPRLKekgkwsaaf 247
Cdd:cd05118 158 -TPYVATRWYRAPEV--LLGAKPYGSSIDIWSLGCILAELLTGRPLFPGDSEVDQLAKIVRLlG--TPEAL--------- 223
                       250       260
                ....*....|....*....|....*
gi 6005810  248 hNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd05118 224 -DLLSKMLKYDPAKRITASQALAHP 247
STKc_Nek1 cd08218
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
17-269 2.85e-36

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Nek1 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270858 [Multi-domain]  Cd Length: 256  Bit Score: 137.63  E-value: 2.85e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALK---MVKMEPDDDVSTlQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd08218   2 YVRIKKIGEGSFGKALLVKSKEDGKQYVIKeinISKMSPKEREES-RKEVAVLSKMKHPNIVQYQESFEENGNLYIVMDY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSL-QDIYQVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT--LARr 169
Cdd:cd08218  81 CDGGDLyKRINAQRGVLfPEDQILDWFVQLCLALKHVHDRKILHRDIKSQNIFLTKDGIIKLGDFGIARVLNSTveLAR- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 lSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRlkeKGKWSAAFHN 249
Cdd:cd08218 160 -TCIGTPYYLSPEICE---NKPYNNKSDIWALGCVLYEMCTLKHA-FEAGNMKNLVLKIIRGSYPPV---PSRYSYDLRS 231
                       250       260
                ....*....|....*....|
gi 6005810  250 FIKVTLTKSPKKRPSATKML 269
Cdd:cd08218 232 LVSQLFKRNPRDRPSINSIL 251
PKc_MEK cd06615
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
15-271 3.42e-36

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 and MEK2 are MAPK kinases (MAPKKs or MKKs), and are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132946 [Multi-domain]  Cd Length: 308  Bit Score: 139.11  E-value: 3.42e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06615   1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNqIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARrlSF 172
Cdd:cd06615  81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKImHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELA----ELQPP-------LFD--VHPLRVLFLMTKSGYQ----- 233
Cdd:cd06615 159 VGTRSYMSPE----RLQGThYTVQSDIWSLGLSLVEMAigryPIPPPdakeleaMFGrpVSEGEAKESHRPVSGHppdsp 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 6005810  234 ----------------PPRLkEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd06615 235 rpmaifelldyivnepPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287
STKc_EIF2AK4_GCN2_rpt2 cd14046
Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation ...
17-272 3.54e-36

Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GCN2 (or EIF2AK4) is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. Its kinase domain is activated via conformational changes as a result of the binding of uncharged tRNA to the HisRS-like domain. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270948 [Multi-domain]  Cd Length: 278  Bit Score: 137.89  E-value: 3.54e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd14046   8 FEELQVLGKGAFGQVVKVRNKLDGRYYAIKKIKLRSESKNnSRILREVMLLSRLNHQHVVRYYQAWIERANLYIQMEYCE 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI-----------SAQIGA 164
Cdd:cd14046  88 KSTLRDLIDSGLFQDTDRLWRLFRQILEGLAYIHSQGIIHRDLKPVNIFLDSNGNVKIGDFGLatsnklnvelaTQDINK 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRLSF-------IGTPYWMAPEVAAVAlKGGYNELCDIWSLGITAIELAelQPplFDVHPLRVLFLMT---KSGYQP 234
Cdd:cd14046 168 STSAALGSsgdltgnVGTALYVAPEVQSGT-KSTYNEKVDMYSLGIIFFEMC--YP--FSTGMERVQILTAlrsVSIEFP 242
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  235 PRLkEKGKWSAAFhNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14046 243 PDF-DDNKHSKQA-KLIRWLLNHDPAKRPSAQELLKSE 278
STKc_MEKK1 cd06630
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
23-273 5.16e-36

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK1 is a MAPK kinase kinase (MAPKKK or MKKK) that phosphorylates and activates activates the ERK1/2 and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270800 [Multi-domain]  Cd Length: 268  Bit Score: 137.18  E-value: 5.16e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKM------EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd06630   8 LGTGAFSSCYQARDVKTGTLMAVKQVSFcrnsssEQEEVVEAIREEIRMMARLNHPNIVRMLGATQHKSHFNIFVEWMAG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE-VRLADFGISAQIGATLARRLSF--- 172
Cdd:cd06630  88 GSVASLLSKYGAFSENVIINYTLQILRGLAYLHDNQIIHRDLKGANLLVDSTGQrLRIADFGAAARLASKGTGAGEFqgq 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 -IGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPL----FDVHpLRVLFLMTkSGYQPPRLKEkgKWSAA 246
Cdd:cd06630 168 lLGTIAFMAPEV----LRGeQYGRSCDVWSVGCVIIEMATAKPPWnaekISNH-LALIFKIA-SATTPPPIPE--HLSPG 239
                       250       260
                ....*....|....*....|....*..
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQL 273
Cdd:cd06630 240 LRDVTLRCLELQPEDRPPARELLKHPV 266
PKc_MKK5 cd06619
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
20-276 5.94e-36

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 5; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK5 (also called MEK5) is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132950 [Multi-domain]  Cd Length: 279  Bit Score: 137.32  E-value: 5.94e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVkmePDDDVSTLQKEIL----ILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd06619   6 QEILGHGNGGTVYKAYHLLTRRILAVKVI---PLDITVELQKQIMseleILYKCDSPYIIGFYGAFFVENRISICTEFMD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLqDIYqvtGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARrlSFIGT 175
Cdd:cd06619  83 GGSL-DVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAK--TYVGT 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVH-------PLRVLFLMTKSgyQPPRLKEkGKWSAAFH 248
Cdd:cd06619 157 NAYMAPERIS---GEQYGIHSDVWSLGISFMELALGRFPYPQIQknqgslmPLQLLQCIVDE--DPPVLPV-GQFSEKFV 230
                       250       260
                ....*....|....*....|....*...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06619 231 HFITQCMRKQPKERPAPENLMDHPFIVQ 258
STKc_GAK_like cd13985
Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of ...
16-273 8.54e-36

Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes cyclin G-Associated Kinase (GAK), Drosophila melanogaster Numb-Associated Kinase (NAK)-like proteins, and similar protein kinases. GAK plays regulatory roles in clathrin-mediated membrane trafficking, the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses. NAK plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. The GAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270887 [Multi-domain]  Cd Length: 272  Bit Score: 136.70  E-value: 8.54e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKT-CRHANIVAYHGSYLW----LQKLWIC 90
Cdd:cd13985   1 RYQVTKQLGEGGFSYVYLAHDVNTGRRYALKRMYFNDEEQLRVAIKEIEIMKRlCGHPNIVQYYDSAILssegRKEVLLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGaGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDAGEVRLADFGiSAQIGATL 166
Cdd:cd13985  81 MEYCP-GSLVDILEKSPPspLSEEEVLRIFYQICQAVGHLHSQSPpiIHRDIKIENILFSNTGRFKLCDFG-SATTEHYP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIG----------TPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPpr 236
Cdd:cd13985 159 LERAEEVNiieeeiqkntTPMYRAPEMIDLYSKKPIGEKADIWALGCLLYKLCFFKLPFDESSKLAIVAGKYSIPEQP-- 236
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 6005810  237 lkekgKWSAAFHNFIKVTLTKSPKKRPSATKmLSHQL 273
Cdd:cd13985 237 -----RYSPELHDLIRHMLTPDPAERPDIFQ-VINII 267
STKc_Nek3 cd08219
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
17-274 1.82e-35

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173759 [Multi-domain]  Cd Length: 255  Bit Score: 135.49  E-value: 1.82e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM-EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd08219   2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLpKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSL-QDIYQVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd08219  82 GGDLmQKIKLQRGKLfPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFL-MTKSGYQP-PrlkekGKWSAAFHNFI 251
Cdd:cd08219 162 GTPYYVPPEIWE---NMPYNNKSDIWSLGCILYELCTLKHP-FQANSWKNLILkVCQGSYKPlP-----SHYSYELRSLI 232
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08219 233 KQMFKRNPRSRPSATTILSRGSL 255
STKc_EIF2AK cd13996
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
14-270 2.57e-35

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: General Control Non-derepressible-2 (GCN2) which is activated during amino acid or serum starvation; protein kinase regulated by RNA (PKR) which is activated by double stranded RNA; heme-regulated inhibitor kinase (HRI) which is activated under heme-deficient conditions; and PKR-like endoplasmic reticulum kinase (PERK) which is activated when misfolded proteins accumulate in the ER. The EIF2AK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270898 [Multi-domain]  Cd Length: 273  Bit Score: 135.50  E-value: 2.57e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM-EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd13996   5 LNDFEEIELLGSGGFGSVYKVRNKVDGVTYAIKKIRLtEKSSASEKVLREVKALAKLNHPNIVRYYTAWVEEPPLYIQME 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQD-IYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-NDAGEVRLADFGISAQIGATL-- 166
Cdd:cd13996  85 LCEGGTLRDwIDRRNSSskNDRKLALELFKQILKGVSYIHSKGIVHRDLKPSNIFLdNDDLQVKIGDFGLATSIGNQKre 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ------------ARRLSFIGTPYWMAPEVaavaLKGG-YNELCDIWSLGITAIELaeLQPplFDVHPLRVLFLMT-KSGY 232
Cdd:cd13996 165 lnnlnnnnngntSNNSVGIGTPLYASPEQ----LDGEnYNEKADIYSLGIILFEM--LHP--FKTAMERSTILTDlRNGI 236
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  233 QPPRLKEKGKwsaAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd13996 237 LPESFKAKHP---KEADLIQSLLSKNPEERPSAEQLLR 271
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
19-264 5.56e-35

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 133.81  E-value: 5.56e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      19 LLQRLGGGTYGEVFKAR----DKVSGDLVALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:smart00219   3 LGKKLGEGAFGEVYKGKlkgkGGKKKVEVAVKTLKEDASEqQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEY 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      94 CGAGSLQDIYQVT-GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-----AQIGATLA 167
Cdd:smart00219  83 MEGGDLLSYLRKNrPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSrdlydDDYYRKRG 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     168 RRLsfigtPY-WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMtKSGYQPPRLKEKgkwSA 245
Cdd:smart00219 163 GKL-----PIrWMAPE---SLKEGKFTSKSDVWSFGVLLWEIFTLgEQPYPGMSNEEVLEYL-KNGYRLPQPPNC---PP 230
                          250
                   ....*....|....*....
gi 6005810     246 AFHNFIKVTLTKSPKKRPS 264
Cdd:smart00219 231 ELYDLMLQCWAEDPEDRPT 249
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
19-264 8.27e-35

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 133.44  E-value: 8.27e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      19 LLQRLGGGTYGEVFKAR----DKVSGDLVALKMVKMEPDDD-VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:smart00221   3 LGKKLGEGAFGEVYKGTlkgkGDGKEVEVAVKTLKEDASEQqIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      94 CGAGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-----AQIGATL 166
Cdd:smart00221  83 MPGGDLLDYLRKNRPkeLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSrdlydDDYYKVK 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     167 ARRLsfigtPY-WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMtKSGYQPPRLKEKgkwS 244
Cdd:smart00221 163 GGKL-----PIrWMAPE---SLKEGKFTSKSDVWSFGVLLWEIFTLgEEPYPGMSNAEVLEYL-KKGYRLPKPPNC---P 230
                          250       260
                   ....*....|....*....|
gi 6005810     245 AAFHNFIKVTLTKSPKKRPS 264
Cdd:smart00221 231 PELYKLMLQCWAEDPEDRPT 250
PKc_MEK1 cd06650
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
15-276 8.89e-35

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 1; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270816 [Multi-domain]  Cd Length: 319  Bit Score: 135.18  E-value: 8.89e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06650   5 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIrNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARrlSF 172
Cdd:cd06650  85 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKImHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SF 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELA----ELQPPlfDVHPLRVLFLMTKSGY--------------- 232
Cdd:cd06650 163 VGTRSYMSPE----RLQGThYSVQSDIWSMGLSLVEMAvgryPIPPP--DAKELELMFGCQVEGDaaetpprprtpgrpl 236
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  233 ----------------------QPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd06650 237 ssygmdsrppmaifelldyivnEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 302
STKc_CDK4_6_like cd07838
Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; ...
17-271 1.91e-34

Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270831 [Multi-domain]  Cd Length: 287  Bit Score: 133.17  E-value: 1.91e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILK---TCRHANIV----AYHGSYLWLQ- 85
Cdd:cd07838   1 YEEVAEIGEGAYGTVYKARDLQDGRFVALKKVRVPLSEEgipLSTI-REIALLKqleSFEHPNVVrlldVCHGPRTDREl 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGagslQDIYQ-----VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisa 160
Cdd:cd07838  80 KLTLVFEHVD----QDLATyldkcPKPGLPPETIKDLMRQLLRGLDFLHSHRIVHRDLKPQNILVTSDGQVKLADFG--- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 qigatLARRLSF-------IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQpPLF----DVHPLRVLF---- 225
Cdd:cd07838 153 -----LARIYSFemaltsvVVTLWYRAPE---VLLQSSYATPVDMWSVGCIFAELFNRR-PLFrgssEADQLGKIFdvig 223
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  226 -----------LMTKSGYqPPRLKEKGK-----WSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07838 224 lpseeewprnsALPRSSF-PSYTPRPFKsfvpeIDEEGLDLLKKMLTFNPHKRISAFEALQH 284
STKc_MAST_like cd05579
Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs ...
25-265 2.88e-34

Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAST kinases, MAST-like (MASTL) kinases (also called greatwall kinase or Gwl), and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which like in MASTL, also contains an insert relative to MAST kinases. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MASTL/Gwl is involved in the regulation of mitotic entry, mRNA stabilization, and DNA checkpoint recovery. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. The MAST-like kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270731 [Multi-domain]  Cd Length: 272  Bit Score: 132.34  E-value: 2.88e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   25 GGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD 101
Cdd:cd05579   3 RGAYGRVYLAKKKSTGDLYAIKVIKkrdMIRKNQVDSVLAERNILSQAQNPFVVKLYYSFQGKKNLYLVMEYLPGGDLYS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS---------------AQIGATL 166
Cdd:cd05579  83 LLENVGALDEDVARIYIAEIVLALEYLHSHGIIHRDLKPDNILIDANGHLKLTDFGLSkvglvrrqiklsiqkKSNGAPE 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPlRVLFLMTKSG-YQPPrlkEKGKWSA 245
Cdd:cd05579 163 KEDRRIVGTPDYLAPE---ILLGQGHGKTVDWWSLGVILYEFLVGIPPFHAETP-EEIFQNILNGkIEWP---EDPEVSD 235
                       250       260
                ....*....|....*....|
gi 6005810  246 AFHNFIKVTLTKSPKKRPSA 265
Cdd:cd05579 236 EAKDLISKLLTPDPEKRLGA 255
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
16-271 3.60e-34

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 131.35  E-value: 3.60e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALK--MVKMEPDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd13997   1 HFHELEQIGSGSFSEVFKVRSKVDGCLYAVKksKKPFRGPKERARALREVEAHaALGQHPNIVRYYSSWEEGGHLYIQME 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTG---SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARR 169
Cdd:cd13997  81 LCENGSLQDALEELSpisKLSEAEVWDLLLQVALGLAFIHSKGIVHLDIKPDNIFISNKGTCKIGDFGLATRLETSGDVE 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LsfiGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAElQPPLFDVHPlrvLFLMTKSGYQPPRLKEKGkwSAAFHN 249
Cdd:cd13997 161 E---GDSRYLAPEL--LNENYTHLPKADIFSLGVTVYEAAT-GEPLPRNGQ---QWQQLRQGKLPLPPGLVL--SQELTR 229
                       250       260
                ....*....|....*....|..
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd13997 230 LLKVMLDPDPTRRPTADQLLAH 251
STKc_Nek11 cd08222
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
17-274 4.69e-34

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 11; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270861 [Multi-domain]  Cd Length: 260  Bit Score: 131.39  E-value: 4.69e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK------MEPDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd08222   2 YRVVRKLGSGNFGTVYLVSDLKATADEELKVLKeisvgeLQPDETVDAN-REAKLLSKLDHPAIVKFHDSFVEKESFCIV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSL----QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDaGEVRLADFGISAQIGATL 166
Cdd:cd08222  81 TEYCEGGDLddkiSEYKKSGTTIDENQILDWFIQLLLAVQYMHERRILHRDLKAKNIFLKN-NVIKVGDFGISRILMGTS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyQPPRLKEkgKWSA 245
Cdd:cd08222 160 DLATTFTGTPYYMSPEV----LKHeGYNSKSDIWSLGCILYEMCCLKHA-FDGQNLLSVMYKIVEG-ETPSLPD--KYSK 231
                       250       260
                ....*....|....*....|....*....
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08222 232 ELNAIYSRMLNKDPALRPSAAEILKIPFI 260
STKc_Chk1 cd14069
Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the ...
17-271 4.94e-34

Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chk1 is implicated in many major checkpoints of the cell cycle, providing a link between upstream sensors and the cell cycle engine. It plays an important role in DNA damage response and maintaining genomic stability. Chk1 acts as an effector of the sensor kinase, ATR (ATM and Rad3-related), a member of the PI3K family, which is activated upon DNA replication stress. Chk1 delays mitotic entry in response to replication blocks by inhibiting cyclin dependent kinase (Cdk) activity. In addition, Chk1 contributes to the function of centrosome and spindle-based checkpoints, inhibits firing of origins of DNA replication (Ori), and represses transcription of cell cycle proteins including cyclin B and Cdk1. The Chk1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270971 [Multi-domain]  Cd Length: 261  Bit Score: 131.30  E-value: 4.94e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14069   3 WDLVQTLGEGAFGEVFLAVNRNTEEAVAVKFVDMKraPGDCPENIKKEVCIQKMLSHKNVVRFYGHRREGEFQYLFLEYA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL--SF 172
Cdd:cd14069  83 SGGELFDKIEPDVGMPEDVAQFYFQQLMAGLKYLHSCGITHRDIKPENLLLDENDNLKISDFGLATVFRYKGKERLlnKM 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVAAvalKGGYN-ELCDIWSLGI--TAIELAEL---QPPlfDVHPLRVLFLMTKSGYQPPrlkekgkW--- 243
Cdd:cd14069 163 CGTLPYVAPELLA---KKKYRaEPVDVWSCGIvlFAMLAGELpwdQPS--DSCQEYSDWKENKKTYLTP-------Wkki 230
                       250       260
                ....*....|....*....|....*...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14069 231 DTAALSLLRKILTENPNKRITIEDIKKH 258
STKc_Nek10 cd08528
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
17-270 7.61e-34

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Nek10 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270867 [Multi-domain]  Cd Length: 270  Bit Score: 131.09  E-value: 7.61e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSG-DLVALKMVKM----------EPDDDVSTLQKEILILK-TCRHANIVAYHGSYLWL 84
Cdd:cd08528   2 YAVLELLGSGAFGCVYKVRKKSNGqTLLALKEINMtnpafgrteqERDKSVGDIISEVNIIKeQLRHPNIVRYYKTFLEN 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIY----QVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGIS 159
Cdd:cd08528  82 DRLYIVMELIEGAPLGEHFsslkEKNEHFTEDRIWNIFVQMVLALRYLHKEKQIvHRDLKPNNIMLGEDDKVTITDFGLA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQIGATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPprLKE 239
Cdd:cd08528 162 KQKGPESSKMTSVVGTILYSCPEIVQ---NEPYGEKADIWALGCILYQMCTLQPPFYSTNMLTLATKIVEAEYEP--LPE 236
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  240 kGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd08528 237 -GMYSDDITFVIRSCLTPDPEARPDIVEVSS 266
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
17-271 1.12e-33

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 129.74  E-value: 1.12e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKmVKMEPDDDVSTLQKEIL----ILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14050   3 FTILSKLGEGSFGEVFKVRSREDGKLYAVK-RSRSRFRGEKDRKRKLEeverHEKLGEHPNCVRFIKAWEEKGILYIQTE 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCgAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSf 172
Cdd:cd14050  82 LC-DTSLQQYCEETHSLPESEVWNILLDLLKGLKHLHDHGLIHLDIKPANIFLSKDGVCKLGDFGLVVELDKEDIHDAQ- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELA-ELQPPLFDV--HPLRvlflmtkSGYQPPRLKEkgKWSAAFHN 249
Cdd:cd14050 160 EGDPRYMAPEL----LQGSFTKAADIFSLGITILELAcNLELPSGGDgwHQLR-------QGYLPEEFTA--GLSPELRS 226
                       250       260
                ....*....|....*....|..
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14050 227 IIKLMMDPDPERRPTAEDLLAL 248
STKc_CDK5 cd07839
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs ...
17-216 1.19e-33

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143344 [Multi-domain]  Cd Length: 284  Bit Score: 131.02  E-value: 1.19e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd07839   2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEgvPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GagslQDIYQVTGSLSELQISYVCR----EVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd07839  82 D----QDLKKYFDSCNGDIDPEIVKsfmfQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  171 SFIGTPYWMAPEVAAVAlkGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd07839 158 AEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLF 201
STKc_EIF2AK2_PKR cd14047
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
14-271 2.27e-33

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Protein Kinase regulated by RNA; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKR (or EIF2AK2) contains an N-terminal double-stranded RNA (dsRNA) binding domain and a C-terminal catalytic kinase domain. It is activated by dsRNA, which is produced as a replication intermediate in virally infected cells. It plays a key role in mediating innate immune responses to viral infection. PKR is also directly activated by PACT (protein activator of PKR) and heparin, and is inhibited by viral proteins and RNAs. PKR also regulates transcription and signal transduction in diseased cells, playing roles in tumorigenesis and neurodegenerative diseases. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PKR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270949 [Multi-domain]  Cd Length: 267  Bit Score: 129.53  E-value: 2.27e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMepddDVSTLQKEILILKTCRHANIVAYHGSY------------ 81
Cdd:cd14047   5 RQDFKEIELIGSGGFGQVFKAKHRIDGKTYAIKRVKL----NNEKAEREVKALAKLDHPNIVRYNGCWdgfdydpetsss 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   82 ----LWLQKLWICMEFCGAGSLQD-IYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLAD 155
Cdd:cd14047  81 nssrSKTKCLFIQMEFCEKGTLESwIEKRNGEkLDKVLALEIFEQITKGVEYIHSKKLIHRDLKPSNIFLVDTGKVKIGD 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  156 FGISAQIGATLARRLSfIGTPYWMAPEVAAVAlkgGYNELCDIWSLGITaieLAELQPPLFDVHPLRVLFLMTKSGYQPP 235
Cdd:cd14047 161 FGLVTSLKNDGKRTKS-KGTLSYMSPEQISSQ---DYGKEVDIYALGLI---LFELLHVCDSAFEKSKFWTDLRNGILPD 233
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  236 RLKEKGKWSAAfhnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14047 234 IFDKRYKIEKT---IIKKMLSKKPEDRPNASEILRT 266
STKc_MAK_like cd07830
Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs ...
17-271 3.04e-33

Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia, suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270824 [Multi-domain]  Cd Length: 283  Bit Score: 129.58  E-value: 3.04e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVSTLqKEIL-ILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd07830   1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKkkFYSWEECMNL-REVKsLRKLNEHPNIVKLKEVFRENDELYFVFEY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGagslQDIYQVT-----GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLAR 168
Cdd:cd07830  80 ME----GNLYQLMkdrkgKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFG--------LAR 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RL-------SFIGTPYWMAPEvaaVALKGG-YNELCDIWSLGITAIELAELQpPLFdvhP-----------LRVL----- 224
Cdd:cd07830 148 EIrsrppytDYVSTRWYRAPE---ILLRSTsYSSPVDIWALGCIMAELYTLR-PLF---PgsseidqlykiCSVLgtptk 220
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  225 -------FLMTKSGYQPPRLKEKG------KWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07830 221 qdwpegyKLASKLGFRFPQFAPTSlhqlipNASPEAIDLIKDMLRWDPKKRPTASQALQH 280
STKc_CaMKI_gamma cd14166
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
14-271 3.38e-33

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271068 [Multi-domain]  Cd Length: 285  Bit Score: 129.73  E-value: 3.38e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14166   2 RETFIFMEVLGSGAFSEVYLVKQRSTGKLYALKCIKKSPLSRDSSLENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAQ----IGATL 166
Cdd:cd14166  82 VSGGELFDRILERGVYTEKDASRVINQVLSAVKYLHENGIVHRDLKPENLLYltpDENSKIMITDFGLSKMeqngIMSTA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ArrlsfiGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRvLFLMTKSGYQPprlKEKGKW--- 243
Cdd:cd14166 162 C------GTPGYVAPEVLA---QKPYSKAVDCWSIGVITYILLCGYPPFYEETESR-LFEKIKEGYYE---FESPFWddi 228
                       250       260
                ....*....|....*....|....*...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14166 229 SESAKDFIRHLLEKNPSKRYTCEKALSH 256
STKc_NUAK cd14073
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze ...
17-274 6.88e-33

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK1, also called ARK5 (AMPK-related protein kinase 5), regulates cell proliferation and displays tumor suppression through direct interaction and phosphorylation of p53. It is also involved in cell senescence and motility. High NUAK1 expression is associated with invasiveness of nonsmall cell lung cancer (NSCLC) and breast cancer cells. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. The NUAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270975 [Multi-domain]  Cd Length: 254  Bit Score: 127.89  E-value: 6.88e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14073   3 YELLETLGKGTYGKVKLAIERATGREVAIKSIkkdKIEDEQDMVRIRREIEIMSSLNHPHIIRIYEVFENKDKIVIVMEY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA--QIGATLArrlS 171
Cdd:cd14073  83 ASGGELYDYISERRRLPEREARRIFRQIVSAVHYCHKNGVVHRDLKLENILLDQNGNAKIADFGLSNlySKDKLLQ---T 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSG--YQPPRLKEKgkwsaafHN 249
Cdd:cd14073 160 FCGSPLYASPEI--VNGTPYQGPEVDCWSLGVLLYTLVYGTMP-FDGSDFKRLVKQISSGdyREPTQPSDA-------SG 229
                       250       260
                ....*....|....*....|....*
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14073 230 LIRWMLTVNPKRRATIEDIANHWWV 254
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
23-264 1.55e-32

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 126.88  E-value: 1.55e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA--RDKVSGDL-VALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd00192   3 LGEGAFGEVYKGklKGGDGKTVdVAVKTLKEDASEsERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVMEYMEGGD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQD---------IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaqigatlarR 169
Cdd:cd00192  83 LLDflrksrpvfPSPEPSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLS---------R 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPY-----------WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVL-FLmtKSGYQPPR 236
Cdd:cd00192 154 DIYDDDYYrkktggklpirWMAPE---SLKDGIFTSKSDVWSFGVLLWEIFTLgATPYPGLSNEEVLeYL--RKGYRLPK 228
                       250       260
                ....*....|....*....|....*...
gi 6005810  237 LKekgKWSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd00192 229 PE---NCPDELYELMLSCWQLDPEDRPT 253
STKc_Nek9 cd08221
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
16-269 1.65e-32

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270860 [Multi-domain]  Cd Length: 256  Bit Score: 126.77  E-value: 1.65e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd08221   1 HYIPVRVLGRGAFGEAVLYRKTEDNSLVVWKEVNLSrlSEKERRDALNEIDILSLLNHDNIITYYNHFLDGESLFIEMEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQD-IYQVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd08221  81 CNGGNLHDkIAQQKNQLfPEEVVLWYLYQIVSAVSHIHKAGILHRDIKTLNIFLTKADLVKLGDFGISKVLDSESSMAES 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKWSAAFHNF 250
Cdd:cd08221 161 IVGTPYYMSPEL----VQGvKYNFKSDIWAVGCVLYELLTLKRTFDATNPLRLAVKIVQGEYE----DIDEQYSEEIIQL 232
                       250
                ....*....|....*....
gi 6005810  251 IKVTLTKSPKKRPSATKML 269
Cdd:cd08221 233 VHDCLHQDPEDRPTAEELL 251
STKc_MAP3K8 cd13995
Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) ...
26-272 1.79e-32

Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K8 is also called Tumor progression locus 2 (Tpl2) or Cancer Osaka thyroid (Cot), and was first identified as a proto-oncogene in T-cell lymphoma induced by MoMuL virus and in breast carcinoma induced by MMTV. Activated MAP3K8 induces various MAPK pathways including Extracellular Regulated Kinase (ERK) 1/2, c-Jun N-terminal kinase (JNK), and p38. It plays a pivotal role in innate immunity, linking Toll-like receptors to the production of TNF and the activation of ERK in macrophages. It is also required in interleukin-1beta production and is critical in host defense against Gram-positive bacteria. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270897 [Multi-domain]  Cd Length: 256  Bit Score: 126.66  E-value: 1.79e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKARDKVSGDLVALKMVKME---PDDdvstlqkeILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd13995  15 GAFGKVYLAQDTKTKKRMACKLIPVEqfkPSD--------VEIQACFRHENIAELYGALLWEETVHLFMEAGEGGSVLEK 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVrLADFGISAQIGATLARRLSFIGTPYWMAPE 182
Cdd:cd13995  87 LESCGPMREFEIIWVTKHVLKGLDFLHSKNIIHHDIKPSNIVFMSTKAV-LVDFGLSVQMTEDVYVPKDLRGTEIYMSPE 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  183 vaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRV----LFLMTKSGyqPPRLKEKGKWSAAFHNFIKVTLTKS 258
Cdd:cd13995 166 ---VILCRGHNTKADIYSLGATIIHMQTGSPPWVRRYPRSAypsyLYIIHKQA--PPLEDIAQDCSPAMRELLEAALERN 240
                       250
                ....*....|....
gi 6005810  259 PKKRPSATKMLSHQ 272
Cdd:cd13995 241 PNHRSSAAELLKHE 254
STKc_CDC2L1 cd07843
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze ...
15-271 2.18e-32

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173741 [Multi-domain]  Cd Length: 293  Bit Score: 127.34  E-value: 2.18e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCRHANIVAYH----GSYLwlQKL 87
Cdd:cd07843   5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEgfpITSL-REINILLKLQHPNIVTVKevvvGSNL--DKI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCgAGSLQDIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd07843  82 YMVMEYV-EHDLKSLMeTMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGitAIeLAEL--QPPLF----DVHPLRVLF------------- 225
Cdd:cd07843 161 KPYTQLVVTLWYRAPEL----LLGAkeYSTAIDMWSVG--CI-FAELltKKPLFpgksEIDQLNKIFkllgtptekiwpg 233
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  226 --------LMTKSGYQPPRLKEK---GKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07843 234 fselpgakKKTFTKYPYNQLRKKfpaLSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290
STKc_cGK cd05572
Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); ...
23-262 2.27e-32

Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270724 [Multi-domain]  Cd Length: 262  Bit Score: 126.57  E-value: 2.27e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKmvKMEPDDDVST-LQKEIL----ILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd05572   1 LGVGGFGRVELVQLKSKGRTFALK--CVKKRHIVQTrQQEHIFsekeILEECNSPFIVKLYRTFKDKKYLYMLMEYCLGG 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlARRLSFIGTPY 177
Cdd:cd05572  79 ELWTILRDRGLFDEYTARFYTACVVLAFEYLHSRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLGSG-RKTWTFCGTPE 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  178 WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPlF---DVHPLRV--LFLMTKSGYQPPRLKEKgkwsaAFHNFIK 252
Cdd:cd05572 158 YVAPE---IILNKGYDFSVDYWSLGILLYELLTGRPP-FggdDEDPMKIynIILKGIDKIEFPKYIDK-----NAKNLIK 228
                       250
                ....*....|
gi 6005810  253 VTLTKSPKKR 262
Cdd:cd05572 229 QLLRRNPEER 238
STKc_Nek8 cd08220
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
17-274 4.75e-32

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Nek8 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270859 [Multi-domain]  Cd Length: 256  Bit Score: 125.62  E-value: 4.75e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd08220   2 YEKIRVVGRGAYGTVYLCRRKDDNKLVIIKQIPVEqmTKEERQAALNEVKVLSMLHHPNIIEYYESFLEDKALMIVMEYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE-VRLADFGISaQIGATLARRLS 171
Cdd:cd08220  82 PGGTLFEYIQQRKGslLSEEEILHFFVQILLALHHVHSKQILHRDLKTQNILLNKKRTvVKIGDFGIS-KILSSKSKAYT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPrlkEKGKWSAAFHNFI 251
Cdd:cd08220 161 VVGTPCYISPELCE---GKPYNQKSDIWALGCVLYELASLKRA-FEAANLPALVLKIMRGTFAP---ISDRYSEELRHLI 233
                       250       260
                ....*....|....*....|...
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd08220 234 LSMLHLDPNKRPTLSEIMAQPII 256
PKc_MKK4 cd06616
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
14-272 5.29e-32

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 4; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270790 [Multi-domain]  Cd Length: 291  Bit Score: 126.33  E-value: 5.29e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDdvsTLQKEIL-----ILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd06616   5 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLmdldvVMRSSDCPYIVKFYGALFREGDCW 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAgSLQDIYQVT-----GSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd06616  82 ICMELMDI-SLDKFYKYVyevldSVIPEEILGKIAVATVKALNYLKEELKIiHRDVKPSNILLDRNGNIKLCDFGISGQL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTPYwMAPE-VAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyQPPRLK--E 239
Cdd:cd06616 161 VDSIAKTRDAGCRPY-MAPErIDPSASRDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DPPILSnsE 238
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  240 KGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd06616 239 EREFSPSFVNFVNLCLIKDESKRPKYKELLKHP 271
STKc_CaMKI cd14083
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
14-271 7.36e-32

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270985 [Multi-domain]  Cd Length: 259  Bit Score: 124.79  E-value: 7.36e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14083   2 RDKYEFKEVLGTGAFSEVVLAEDKATGKLVAIKCIdKKALKGKEDSLENEIAVLRKIKHPNIVQLLDIYESKSHLYLVME 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISA-QIGATLAr 168
Cdd:cd14083  82 LVTGGELFDRIVEKGSYTEKDASHLIRQVLEAVDYLHSLGIVHRDLKPENLLYYSPDEdskIMISDFGLSKmEDSGVMS- 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 rlSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKW---SA 245
Cdd:cd14083 161 --TACGTPGYVAPEVLA---QKPYGKAVDCWSIGVISYILLCGYPPFYDENDSKLFAQILKAEYE----FDSPYWddiSD 231
                       250       260
                ....*....|....*....|....*.
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14083 232 SAKDFIRHLMEKDPNKRYTCEQALEH 257
STKc_TSSK-like cd14080
Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs ...
17-271 9.76e-32

Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. TSSK6, also called SSTK, is expressed at the head of elongated sperm. TSSK1/TSSK2 double knock-out and TSSK6 null mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270982 [Multi-domain]  Cd Length: 262  Bit Score: 124.60  E-value: 9.76e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKA--RDKVSGDLVALKMV--KMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14080   2 YRLGKTIGEGSYSKVKLAeyTKSGLKEKVACKIIdkKKAPKDFLEKfLPRELEILRKLRHPNIIQVYSIFERGSKVFIFM 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd14080  82 EYAEHGDLLEYIQKRGALSESQARIWFRQLALAVQYLHSLDIAHRDLKCENILLDSNNNVKLSDFGFARLCPDDDGDVLS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 --FIGTPYWMAPEVaavaLKG-GYN-ELCDIWSLGItaielaelqpplfdvhplrVLFLMT------------------- 228
Cdd:cd14080 162 ktFCGSAAYAAPEI----LQGiPYDpKKYDIWSLGV-------------------ILYIMLcgsmpfddsnikkmlkdqq 218
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 6005810  229 KSGYQPPRLKEkgKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14080 219 NRKVRFPSSVK--KLSPECKDLIDQLLEPDPTKRATIEEILNH 259
PTZ00266 PTZ00266
NIMA-related protein kinase; Provisional
15-310 1.51e-31

NIMA-related protein kinase; Provisional


Pssm-ID: 173502 [Multi-domain]  Cd Length: 1021  Bit Score: 132.94  E-value: 1.51e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYL--WLQKLWIC 90
Cdd:PTZ00266   13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRglKEREKSQLVIEVNVMRELKHKNIVRYIDRFLnkANQKLYIL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     91 MEFCGAGSL----QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK-------IHRDIKGANIL----INDAGEV---- 151
Cdd:PTZ00266   93 MEFCDAGDLsrniQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDgpngervLHRDLKPQNIFlstgIRHIGKItaqa 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    152 ---------RLADFGISAQIG-ATLARrlSFIGTPYWMAPEVAAVALKgGYNELCDIWSLGITAIELAELQPPLFDVHPL 221
Cdd:PTZ00266  173 nnlngrpiaKIGDFGLSKNIGiESMAH--SCVGTPYYWSPELLLHETK-SYDDKSDMWALGCIIYELCSGKTPFHKANNF 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    222 RVLFLMTKSGyqpPRLKEKGKwSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNRGLILDLLDKLKNPGKGPSIG 301
Cdd:PTZ00266  250 SQLISELKRG---PDLPIKGK-SKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPPVGAAGGGAGVAAAPGAVVARR 325

                  ....*....
gi 6005810    302 DIEDEEPEL 310
Cdd:PTZ00266  326 NPSKEHPGL 334
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
23-272 1.75e-31

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 123.53  E-value: 1.75e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14006   1 LGRGRFGVVKRCIEKATGREFAAKFIPKRDKKKEAVL-REISILNQLQHPRIIQLHEAYESPTELVLILELCSGGELLDR 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND--AGEVRLADFGISAQIGATLARRLSFiGTPYWMA 180
Cdd:cd14006  80 LAERGSLSEEEVRTYMRQLLEGLQYLHNHHILHLDLKPENILLADrpSPQIKIIDFGLARKLNPGEELKEIF-GTPEFVA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  181 PEVaavaLKG-GYNELCDIWSLGITA-IELAELQPPLFD--------VHPLRVLFlmtksgyQPPrlkEKGKWSAAFHNF 250
Cdd:cd14006 159 PEI----VNGePVSLATDMWSIGVLTyVLLSGLSPFLGEddqetlanISACRVDF-------SEE---YFSSVSQEAKDF 224
                       250       260
                ....*....|....*....|..
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14006 225 IRKLLVKEPRKRPTAQEALQHP 246
PKc_MKK7 cd06618
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
23-274 2.73e-31

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 7; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270791 [Multi-domain]  Cd Length: 295  Bit Score: 124.41  E-value: 2.73e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVAlkmVKMEPDDDVSTLQKEIL-----ILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd06618  23 IGSGTCGQVYKMRHKKTGHVMA---VKQMRRSGNKEENKRILmdldvVLKSHDCPYIVKCYGYFITDSDVFICMELMSTC 99
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYL-HSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSfIGTP 176
Cdd:cd06618 100 LDKLLKRIQGPIPEDILGKMTVSIVKALHYLkEKHGVIHRDVKPSNILLDESGNVKLCDFGISGRLVDSKAKTRS-AGCA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPL------FDVhplrvlflMTK-SGYQPPRLKEKGKWSAAFHN 249
Cdd:cd06618 179 AYMAPERIDPPDNPKYDIRADVWSLGISLVELATGQFPYrnckteFEV--------LTKiLNEEPPSLPPNEGFSPDFCS 250
                       250       260
                ....*....|....*....|....*
gi 6005810  250 FIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd06618 251 FVDLCLTKDHRYRPKYRELLQHPFI 275
STKc_STK33 cd14097
Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the ...
16-272 4.01e-31

Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK33 is highly expressed in the testis and is present in low levels in most tissues. It may be involved in spermatogenesis and organ ontogenesis. It interacts with and phosphorylates vimentin and may be involved in regulating intermediate filament cytoskeletal dynamics. Its role in promoting the cell viability of KRAS-dependent cancer cells is under debate; some studies have found STK33 to promote cancer cell viability, while other studies have found it to be non-essential. KRAS is the most commonly mutated human oncogene, thus, studies on the role of STK33 in KRAS mutant cancer cells are important. The STK33 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270999 [Multi-domain]  Cd Length: 266  Bit Score: 123.04  E-value: 4.01e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14097   2 IYTFGRKLGQGSFGVVIEATHKETQTKWAIKKINREKAGSsaVKLLEREVDILKHVNHAHIIHLEEVFETPKRMYLVMEL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-------NDAGEVRLADFGISAQ-IGAT 165
Cdd:cd14097  82 CEDGELKELLLRKGFFSENETRHIIQSLASAVAYLHKNDIVHRDLKLENILVkssiidnNDKLNIKVTDFGLSVQkYGLG 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSFIGTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKW-- 243
Cdd:cd14097 162 EDMLQETCGTPIYMAPEVISAH---GYSQQCDIWSIGVIMYMLLCGEPPFVAKSEEKLFEEIRKGDLT----FTQSVWqs 234
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  244 -SAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14097 235 vSDAAKNVLQQLLKVDPAHRMTASELLDNP 264
STKc_CDK1_CdkB_like cd07835
Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of ...
17-216 6.70e-31

Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK, CDK2, and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270829 [Multi-domain]  Cd Length: 283  Bit Score: 122.78  E-value: 6.70e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd07835   1 YQKLEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEgvPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GagslQDIYQVTGSLSELQI------SYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR 168
Cdd:cd07835  81 D----LDLKKYMDSSPLTGLdpplikSYL-YQLLQGIAFCHSHRVLHRDLKPQNLLIDTEGALKLADFGLARAFGVPVRT 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAeLQPPLF 216
Cdd:cd07835 156 YTHEVVTLWYRAPEI----LLGSkhYSTPVDIWSVGCIFAEMV-TRRPLF 200
STKc_Pho85 cd07836
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; ...
17-216 8.72e-31

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Pho85 is a multifunctional CDK in yeast. It is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143341 [Multi-domain]  Cd Length: 284  Bit Score: 122.59  E-value: 8.72e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCg 95
Cdd:cd07836   2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTpSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM- 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQ---DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd07836  81 DKDLKkymDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  173 IGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQpPLF 216
Cdd:cd07836 161 VVTLWYRAPDV----LLGSrtYSTSIDIWSVGCIMAEMITGR-PLF 201
STKc_NUAK2 cd14161
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs ...
14-274 1.04e-30

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. NUAK2 is implicated in regulating actin stress fiber assembly through its association with myosin phosphatase Rho-interacting protein (MRIP), which leads to an increase in myosin regulatory light chain (MLC) phosphorylation. It is also associated with tumor growth, migration, and oncogenicity of melanoma cells. The NUAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271063 [Multi-domain]  Cd Length: 255  Bit Score: 121.60  E-value: 1.04e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKvSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd14161   2 KHRYEFLETLGKGTYGRVKKARDS-SGRLVAIKSIrkdRIKDEQDLLHIRREIEIMSSLNHPHIISVYEVFENSSKIVIV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaQIGATLARRL 170
Cdd:cd14161  81 MEYASRGDLYDYISERQRLSELEARHFFRQIVSAVHYCHANGIVHRDLKLENILLDANGNIKIADFGLS-NLYNQDKFLQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyqppRLKEKGKWSAAFhNF 250
Cdd:cd14161 160 TYCGSPLYASPEI--VNGRPYIGPEVDSWSLGVLLYILVHGTMP-FDGHDYKILVKQISSG----AYREPTKPSDAC-GL 231
                       250       260
                ....*....|....*....|....
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14161 232 IRWLLMVNPERRATLEDVASHWWV 255
STKc_CDK7 cd07841
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs ...
17-271 1.19e-30

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270833 [Multi-domain]  Cd Length: 298  Bit Score: 122.68  E-value: 1.19e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM----EPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd07841   2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLgerkEAKDGINfTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCgAGSLQDIYQ-VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd07841  82 EFM-ETDLEKVIKdKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELaELQPPLF----DVHPLRVLF--LMTKSGYQPPRLKE--- 239
Cdd:cd07841 161 HQVVTRWYRAPEL----LFGArhYGVGVDMWSVGCIFAEL-LLRVPFLpgdsDIDQLGKIFeaLGTPTEENWPGVTSlpd 235
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  240 ------------KGKWSAAFH---NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07841 236 yvefkpfpptplKQIFPAASDdalDLLQRLLTLNPNKRITARQALEH 282
STKc_CDK2_3 cd07860
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; ...
20-208 1.52e-30

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270844 [Multi-domain]  Cd Length: 284  Bit Score: 121.84  E-value: 1.52e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd07860   5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEgvPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 --SLQDIYQVTGSLSELQISYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd07860  85 lkKFMDASALTGIPLPLIKSYL-FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 163
                       170       180       190
                ....*....|....*....|....*....|....*
gi 6005810  176 PYWMAPEVaavaLKGG--YNELCDIWSLGITAIEL 208
Cdd:cd07860 164 LWYRAPEI----LLGCkyYSTAVDIWSLGCIFAEM 194
STKc_CDK9 cd07865
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs ...
12-271 2.01e-30

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK9, together with a cyclin partner (cyclin T1, T2a, T2b, or K), is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270848 [Multi-domain]  Cd Length: 310  Bit Score: 122.48  E-value: 2.01e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCRHANIV------------- 75
Cdd:cd07865   9 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQIVALKKVLMENEKEgfpITAL-REIKILQLLKHENVVnlieicrtkatpy 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   76 -AYHGSYlwlqklWICMEFCG---AGSLQDIYqVTGSLSElqISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV 151
Cdd:cd07865  88 nRYKGSI------YLVFEFCEhdlAGLLSNKN-VKFTLSE--IKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGVL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  152 RLADFGI----SAQIGATLARRLSFIGTPYWMAPEVaavaLKG--GYNELCDIWSLGITAIELAELQP------------ 213
Cdd:cd07865 159 KLADFGLarafSLAKNSQPNRYTNRVVTLWYRPPEL----LLGerDYGPPIDMWGAGCIMAEMWTRSPimqgnteqhqlt 234
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  214 --------------PLFDVHPLRVLFLMTKSGYQ--PPRLKEKGKWSAAFHnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07865 235 lisqlcgsitpevwPGVDKLELFKKMELPQGQKRkvKERLKPYVKDPYALD-LIDKLLVLDPAKRIDADTALNH 307
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
17-271 2.61e-30

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 120.86  E-value: 2.61e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMepdddvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14010   2 YVLYDEIGRGKHSVVYKGRRKGTIEFVAIKCVdksKR------PEVLNEVRLTHELKHPNVLKFYEWYETSNHLWLVVEY 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR----- 168
Cdd:cd14010  76 CTGGDLETLLRQDGNLPESSVRKFGRDLVRGLHYIHSKGIIYCDLKPSNILLDGNGTLKLSDFGLARREGEILKElfgqf 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 -----------RLSFIGTPYWMAPEVaavaLKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPR 236
Cdd:cd14010 156 sdegnvnkvskKQAKRGTPYYMAPEL----FQGGvHSFASDLWALGCVLYEMFTGKPPFVAESFTELVEKILNEDPPPPP 231
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  237 LKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14010 232 PKVSSKPSPDFKSLLKGLLEKDPAKRLSWDELVKH 266
STKc_CAMKK cd14118
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; ...
59-275 7.53e-30

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271020 [Multi-domain]  Cd Length: 275  Bit Score: 119.77  E-value: 7.53e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   59 LQKEILILKTCRHANIVAY-------HGSYLWLqklwiCMEFCGAGSLQDIyQVTGSLSELQISYVCREVLQGLAYLHSQ 131
Cdd:cd14118  61 VYREIAILKKLDHPNVVKLvevlddpNEDNLYM-----VFELVDKGAVMEV-PTDNPLSEETARSYFRDIVLGIEYLHYQ 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  132 KKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWMAPEvaavALKGGYNELC----DIWSLGITAIE 207
Cdd:cd14118 135 KIIHRDIKPSNLLLGDDGHVKIADFGVSNEFEGDDALLSSTAGTPAFMAPE----ALSESRKKFSgkalDIWAMGVTLYC 210
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  208 LAELQPPLFDVHPLRvlfLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14118 211 FVFGRCPFEDDHILG---LHEKIKTDPVVFPDDPVVSEQLKDLILRMLDKNPSERITLPEIKEHPWVT 275
STKc_Nek6 cd08228
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
21-276 8.76e-30

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270865 [Multi-domain]  Cd Length: 268  Bit Score: 119.36  E-value: 8.76e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd08228   8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQdcvKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd08228  88 DLSQMIKYFKKqkrlIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF-DVHPLRVLFLMTKSGYQPPRLKEkgKWSAAFHNFIK 252
Cdd:cd08228 168 GTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYgDKMNLFSLCQKIEQCDYPPLPTE--HYSEKLRELVS 242
                       250       260
                ....*....|....*....|....
gi 6005810  253 VTLTKSPKKRPSATKMlsHQLVSQ 276
Cdd:cd08228 243 MCIYPDPDQRPDIGYV--HQIAKQ 264
STKc_CaMKI_alpha cd14167
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
14-275 8.98e-30

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271069 [Multi-domain]  Cd Length: 263  Bit Score: 118.98  E-value: 8.98e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14167   2 RDIYDFREVLGTGAFSEVVLAEEKRTQKLVAIKCIaKKALEGKETSIENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL---INDAGEVRLADFGISaQIGATLARR 169
Cdd:cd14167  82 LVSGGELFDRIVEKGFYTERDASKLIFQILDAVKYLHDMGIVHRDLKPENLLyysLDEDSKIMISDFGLS-KIEGSGSVM 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKW---SAA 246
Cdd:cd14167 161 STACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE----FDSPYWddiSDS 233
                       250       260
                ....*....|....*....|....*....
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14167 234 AKDFIQHLMEKDPEKRFTCEQALQHPWIA 262
STKc_PLK2 cd14188
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the ...
23-271 9.70e-30

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK2, also called Snk (serum-inducible kinase), functions in G1 progression, S-phase arrest, and centriole duplication. Its gene is responsive to both growth factors and cellular stress, is a transcriptional target of p53, and activates a G2-M checkpoint. The PLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271090 [Multi-domain]  Cd Length: 255  Bit Score: 118.58  E-value: 9.70e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVkmePDDDVST------LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14188   9 LGKGGFAKCYEMTDLTTNKVYAAKII---PHSRVSKphqrekIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSR 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:cd14188  86 RSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINENMELKVGDFGLAARLEPLEHRRRTICGTP 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGyqppRLKEKGKWSAAFHNFIKVTLT 256
Cdd:cd14188 166 NYLSPEVLN---KQGHGCESDIWALGCVMYTMLLGRPP-FETTNLKETYRCIREA----RYSLPSSLLAPAKHLIASMLS 237
                       250
                ....*....|....*
gi 6005810  257 KSPKKRPSATKMLSH 271
Cdd:cd14188 238 KNPEDRPSLDEIIRH 252
STKc_CDKL1_4 cd07847
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; ...
15-271 1.16e-29

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270837 [Multi-domain]  Cd Length: 286  Bit Score: 119.40  E-value: 1.16e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALK-MVKMEPDDDVSTLQ-KEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd07847   1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKkFVESEDDPVIKKIAlREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd07847  81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIEL---AELQPPLFDVHPlrvLFLMTK------------------ 229
Cdd:cd07847 161 VATRWYRAPEL----LVGDtqYGPPVDVWAIGCVFAELltgQPLWPGKSDVDQ---LYLIRKtlgdliprhqqifstnqf 233
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  230 -SGYQPPR------LKEK-GKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07847 234 fKGLSIPEpetrepLESKfPNISSPALSFLKGCLQMDPTERLSCEELLEH 283
STKc_Yank1 cd05578
Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the ...
16-262 1.43e-29

Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily contains uncharacterized STKs with similarity to the human protein designated as Yank1 or STK32A. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270730 [Multi-domain]  Cd Length: 257  Bit Score: 118.13  E-value: 1.43e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALK-MVKMEPD--DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd05578   1 HFQILRVIGKGSFGKVCIVQKKDTKKMFAMKyMNKQKCIekDSVRNVLNELEILQELEHPFLVNLWYSFQDEEDMYMVVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQIS-YVCrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-GATLARRL 170
Cdd:cd05578  81 LLLGGDLRYHLQQKVKFSEETVKfYIC-EIVLALDYLHSKNIIHRDIKPDNILLDEQGHVHITDFNIATKLtDGTLATST 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SfiGTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPlFDVHP------LRVLFLMTKSGYQPprlkekgKWS 244
Cdd:cd05578 160 S--GTKPYMAPEVFMRA---GYSFAVDWWSLGVTAYEMLRGKRP-YEIHSrtsieeIRAKFETASVLYPA-------GWS 226
                       250
                ....*....|....*...
gi 6005810  245 AAFHNFIKVTLTKSPKKR 262
Cdd:cd05578 227 EEAIDLINKLLERDPQKR 244
STKc_BUR1 cd07866
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), ...
15-271 1.84e-29

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), Bypass UAS Requirement 1, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BUR1, also called SGV1, is a yeast CDK that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270849 [Multi-domain]  Cd Length: 311  Bit Score: 119.34  E-value: 1.84e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALK--MVKMEPDDDVSTLQKEILILKTCRHANIV-----AYHGSYLWLQKL 87
Cdd:cd07866   8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKkiLMHNEKDGFPITALREIKILKKLKHPNVVplidmAVERPDKSKRKR 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 --------WICMEFCGAGSLQDIyqvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS 159
Cdd:cd07866  88 gsvymvtpYMDHDLSGLLENPSV-----KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQI-----------GATLARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQPPL---FDVHPLRVLF 225
Cdd:cd07866 163 RPYdgpppnpkgggGGGTRKYTNLVVTRWYRPPELLLGERR--YTTAVDIWGIGCVFAEMFTRRPILqgkSDIDQLHLIF 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  226 -LM------TKSGYQ--------------PPRLKEK-GKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07866 241 kLCgtpteeTWPGWRslpgcegvhsftnyPRTLEERfGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308
STKc_PLK1 cd14187
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the ...
4-275 2.37e-29

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. Its localization changes during mitotic progression; associating first with centrosomes in prophase, with kinetochores in prometaphase and metaphase, at the central spindle in anaphase, and in the midbody during telophase. It carries multiple functions throughout the cell cycle through interactions with differrent substrates at these specific subcellular locations. PLK1 is overexpressed in many human cancers and is associated with poor prognosis. The PLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271089 [Multi-domain]  Cd Length: 265  Bit Score: 118.11  E-value: 2.37e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    4 VDPDIFNRDPRDHYdllqrLGGGTYGEVFKARDKVSGDLVALKMV------KMEPDDDVSTlqkEILILKTCRHANIVAY 77
Cdd:cd14187   1 VDPRTRRRYVRGRF-----LGKGGFAKCYEITDADTKEVFAGKIVpkslllKPHQKEKMSM---EIAIHRSLAHQHVVGF 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd14187  73 HGFFEDNDFVYVVLELCRRRSLLELHKRRKALTEPEARYYLRQIILGCQYLHRNRVIHRDLKLGNLFLNDDMEVKIGDFG 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 ISAQIGATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFL-MTKSGYQPPR 236
Cdd:cd14187 153 LATKVEYDGERKKTLCGTPNYIAPEVLS---KKGHSFEVDIWSIGCIMYTLLVGKPP-FETSCLKETYLrIKKNEYSIPK 228
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  237 lkekgKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14187 229 -----HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 262
STKc_Mos cd13979
Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze ...
18-265 3.09e-29

Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mos (or c-Mos) is a germ-cell specific kinase that plays roles in both the release of primary arrest and the induction of secondary arrest in oocytes. It is expressed towards the end of meiosis I and is quickly degraded upon fertilization. It is a component of the cytostatic factor (CSF), which is responsible for metaphase II arrest. In addition, Mos activates a phoshorylation cascade that leads to the activation of the p34 subunit of MPF (mitosis-promoting factor or maturation promoting factor), a cyclin-dependent kinase that is responsible for the release of primary arrest in meiosis I. The Mos subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270881 [Multi-domain]  Cd Length: 265  Bit Score: 117.48  E-value: 3.09e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   18 DLLQRLGGGTYGEVFKARDKvsGDLVALKMVKMEPDDDVS--TLQKEILILKTcRHANIV--------AYHGSYLWlqkl 87
Cdd:cd13979   6 RLQEPLGSGGFGSVYKATYK--GETVAVKIVRRRRKNRASrqSFWAELNAARL-RHENIVrvlaaetgTDFASLGL---- 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 wICMEFCGAGSLQD-IYQVTGSLS-ELQISYVCrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd13979  79 -IIMEYCGNGTLQQlIYEGSEPLPlAHRILISL-DIARALRFCHSHGIVHLDVKPANILISEQGVCKLCDFGCSVKLGEG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LA---RRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPlRVLFLMTKSGYQPP----RL 237
Cdd:cd13979 157 NEvgtPRSHIGGTYTYRAPEL----LKGeRVTPKADIYSFGITLWQMLTRELPYAGLRQ-HVLYAVVAKDLRPDlsglED 231
                       250       260
                ....*....|....*....|....*...
gi 6005810  238 KEKGKWsaaFHNFIKVTLTKSPKKRPSA 265
Cdd:cd13979 232 SEFGQR---LRSLISRCWSAQPAERPNA 256
STKc_MAP3K12_13 cd14059
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase ...
23-271 4.00e-29

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K12 is also called MAPK upstream kinase (MUK), dual leucine zipper-bearing kinase (DLK) or leucine-zipper protein kinase (ZPK). It is involved in the c-Jun N-terminal kinase (JNK) pathway that directly regulates axonal regulation through the phosphorylation of microtubule-associated protein 1B (MAP1B). It also regulates the differentiation of many cell types including adipocytes and may play a role in adipogenesis. MAP3K13, also called leucine zipper-bearing kinase (LZK), directly phosphorylates and activates MKK7, which in turn activates the JNK pathway. It also activates NF-kB through IKK activation and this activity is enhanced by antioxidant protein-1 (AOP-1). MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAP2Ks (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K12/13 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270961 [Multi-domain]  Cd Length: 237  Bit Score: 116.44  E-value: 4.00e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFkaRDKVSGDLVALKMVKMEPDDDVSTLQKeililktCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14059   1 LGSGAQGAVF--LGKFRGEEVAVKKVRDEKETDIKHLRK-------LNHPNIIKFKGVCTQAPCYCILMEYCPYGQLYEV 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLS-ELQISYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlARRLSFIGTPYWMAP 181
Cdd:cd14059  72 LRAGREITpSLLVDWS-KQIASGMNYLHLHKIIHRDLKSPNVLVTYNDVLKISDFGTSKELSEK-STKMSFAGTVAWMAP 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  182 EVAAvalkggyNELC----DIWSLGITAIELAELQPPLFDVHPLRVLFLMtksGYQPPRLKEKGKWSAAFHNFIKVTLTK 257
Cdd:cd14059 150 EVIR-------NEPCsekvDIWSFGVVLWELLTGEIPYKDVDSSAIIWGV---GSNSLQLPVPSTCPDGFKLLMKQCWNS 219
                       250
                ....*....|....
gi 6005810  258 SPKKRPSATKMLSH 271
Cdd:cd14059 220 KPRNRPSFRQILMH 233
STKc_PKA_like cd05580
Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs ...
15-223 5.99e-29

Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the cAMP-dependent protein kinases, PKA and PRKX, and similar proteins. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. PRKX is also reulated by the R subunit and is is present in many tissues including fetal and adult brain, kidney, and lung. It is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PKA-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270732 [Multi-domain]  Cd Length: 290  Bit Score: 117.29  E-value: 5.99e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05580   1 DDFEFLKTLGTGSFGRVRLVKHKDSGKYYALKILKKAKiikLKQVEHVLNEKRILSEVRHPFIVNLLGSFQDDRNLYMVM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARRLS 171
Cdd:cd05580  81 EYVPGGELFSLLRRSGRFPNDVAKFYAAEVVLALEYLHSLDIVYRDLKPENLLLDSDGHIKITDFG--------FAKRVK 152
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  172 FI-----GTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRV 223
Cdd:cd05580 153 DRtytlcGTPEYLAPE---IILSKGHGKAVDWWALGILIYEMLAGYPPFFDENPMKI 206
STKc_MAPK cd07834
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs ...
16-271 6.95e-29

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270828 [Multi-domain]  Cd Length: 329  Bit Score: 118.40  E-value: 6.95e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVkMEPDDDVSTLQK---EILILKTCRHANIVA-----YHGSYLWLQKL 87
Cdd:cd07834   1 RYELLKPIGSGAYGVVCSAYDKRTGRKVAIKKI-SNVFDDLIDAKRilrEIKILRHLKHENIIGlldilRPPSPEEFNDV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAgslqDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd07834  80 YIVTELMET----DLHKVIKSpqpLTDDHIQYFLYQILRGLKYLHSAGVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRL--SFIGTPYWMAPEVAAVALKggYNELCDIWSLGITaieLAEL--QPPLFD----VHPLRVLF--LMT------ 228
Cdd:cd07834 156 DEDKGFltEYVVTRWYRAPELLLSSKK--YTKAIDIWSVGCI---FAELltRKPLFPgrdyIDQLNLIVevLGTpseedl 230
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  229 ------------KSGYQpprlKEKGKWSAAFHN-------FIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07834 231 kfissekarnylKSLPK----KPKKPLSEVFPGaspeaidLLEKMLVFNPKKRITADEALAH 288
STKc_Chk2 cd14084
Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze ...
14-272 1.40e-28

Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Checkpoint Kinase 2 (Chk2) plays an important role in cellular responses to DNA double-strand breaks and related lesions. It is phosphorylated and activated by ATM kinase, resulting in its dissociation from sites of damage to phosphorylate downstream targets such as BRCA1, p53, cell cycle transcription factor E2F1, the promyelocytic leukemia protein (PML) involved in apoptosis, and CDC25 phosphatases, among others. Mutations in Chk2 is linked to a variety of cancers including familial breast cancer, myelodysplastic syndromes, prostate cancer, lung cancer, and osteosarcomas. Chk2 contains an N-terminal SQ/TQ cluster domain (SCD), a central forkhead-associated (FHA) domain, and a C-terminal catalytic kinase domain. The Chk2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270986 [Multi-domain]  Cd Length: 275  Bit Score: 115.95  E-value: 1.40e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK-----------MEPDDDVSTlqkEILILKTCRHANIVAYHGSYL 82
Cdd:cd14084   5 RKKYIMSRTLGSGACGEVKLAYDKSTCKKVAIKIINkrkftigsrreINKPRNIET---EIEILKKLSHPCIIKIEDFFD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGIS 159
Cdd:cd14084  82 AEDDYYIVLELMEGGELFDRVVSNKRLKEAICKLYFYQMLLAVKYLHSNGIIHRDLKPENVLLSSQEEeclIKITDFGLS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQIGATLARRlSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGItaielaelqpplfdvhplrVLFLMTkSGYQP----- 234
Cdd:cd14084 162 KILGETSLMK-TLCGTPTYLAPEVLRSFGTEGYTRAVDCWSLGV-------------------ILFICL-SGYPPfseey 220
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  235 --PRLKE---KGKWsaAFH------------NFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14084 221 tqMSLKEqilSGKY--TFIpkawknvseeakDLVKKMLVVDPSRRPSIEEALEHP 273
STKc_TAK1 cd14058
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated ...
23-277 1.57e-28

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAK1 is also known as mitogen-activated protein kinase kinase kinase 7 (MAPKKK7 or MAP3K7), TAK, or MEKK7. As a MAPKKK, it is an important mediator of cellular responses to extracellular signals. It regulates both the c-Jun N-terminal kinase and p38 MAPK cascades by activating the MAPK kinases, MKK4 and MKK3/6. In addition, TAK1 plays diverse roles in immunity and development, in different biological contexts, through many signaling pathways including TGFbeta/BMP, Wnt/Fz, and NF-kB. It is also implicated in the activation of the tumor suppressor kinase, LKB1. The TAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270960 [Multi-domain]  Cd Length: 253  Bit Score: 115.23  E-value: 1.57e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVkmEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14058   1 VGRGSFGVVCKARWR--NQIVAVKII--ESESEKKAFEVEVRQLSRVDHPNIIKLYGACSNQKPVCLVMEYAEGGSLYNV 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYV---CREVLQGLAYLHSQKK---IHRDIKGANILINDAGEV-RLADFGISAQIGATLARRLsfiGT 175
Cdd:cd14058  77 LHGKEPKPIYTAAHAmswALQCAKGVAYLHSMKPkalIHRDLKPPNLLLTNGGTVlKICDFGTACDISTHMTNNK---GS 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaavaLKGG-YNELCDIWSLGITAIELAELQPPLFDV-HPLRVLFLMTKSGYQPPRLKEKGKwsaAFHNFIKV 253
Cdd:cd14058 154 AAWMAPEV----FEGSkYSEKCDVFSWGIILWEVITRRKPFDHIgGPAFRIMWAVHNGERPPLIKNCPK---PIESLMTR 226
                       250       260
                ....*....|....*....|....*..
gi 6005810  254 TLTKSPKKRPS---ATKMLSHQLVSQP 277
Cdd:cd14058 227 CWSKDPEKRPSmkeIVKIMSHLMQFFP 253
PKc_MEK2 cd06649
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
15-279 2.24e-28

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 2; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK2 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132980 [Multi-domain]  Cd Length: 331  Bit Score: 117.07  E-value: 2.24e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd06649   5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIrNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARrlSF 172
Cdd:cd06649  85 MDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQImHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SF 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELA----ELQPPlfDVHPLRVLF---LMTKSGYQPPRLkekgkws 244
Cdd:cd06649 163 VGTRSYMSPE----RLQGThYSVQSDIWSMGLSLVELAigryPIPPP--DAKELEAIFgrpVVDGEEGEPHSI------- 229
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  245 aafhnfikvtltkSPKKRPSATKMLSHQLVSQPGL 279
Cdd:cd06649 230 -------------SPRPRPPGRPVSGHGMDSRPAM 251
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
20-214 2.68e-28

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 114.89  E-value: 2.68e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAY------HGSYLWLqklwiC 90
Cdd:cd05611   1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKksdMIAKNQVTNVKAERAIMMIQGESPYVAKlyysfqSKDYLYL-----V 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaQIGATLARRL 170
Cdd:cd05611  76 MEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLS-RNGLEKRHNK 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  171 SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd05611 155 KFVGTPDYLAPE---TILGVGDDKMSDWWSLGCVIFEFLFGYPP 195
STKc_ATG1_ULK_like cd14009
Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like ...
23-214 2.76e-28

Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes yeast ATG1 and metazoan homologs including vertebrate ULK1-3. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. It is involved in nutrient sensing and signaling, the assembly of autophagy factors and the execution of autophagy. In metazoans, ATG1 homologs display additional functions. Unc-51 and ULKs have been implicated in neuronal and axonal development. The ATG1/ULK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270911 [Multi-domain]  Cd Length: 251  Bit Score: 114.24  E-value: 2.76e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14009   1 IGRGSFATVWKGRHKQTGEVVAIKEISRKKLNKklQENLESEIAILKSIKHPNIVRLYDVQKTEDFIYLVLEYCAGGDLS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGisaqigatLARRLS------ 171
Cdd:cd14009  81 QYIRKRGRLPEAVARHFMQQLASGLKFLRSKNIIHRDLKPQNLLLSTSGDdpvLKIADFG--------FARSLQpasmae 152
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  172 -FIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPP 214
Cdd:cd14009 153 tLCGSPLYMAPEI----LQFqKYDAKADLWSVGAILFEMLVGKPP 193
STKc_PLK3 cd14189
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the ...
23-272 4.90e-28

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK3, also called Prk or Fnk (FGF-inducible kinase), regulates angiogenesis and responses to DNA damage. Activated PLK3 mediates Chk2 phosphorylation by ATM and the resulting checkpoint activation. PLK3 phosphorylates DNA polymerase delta and may be involved in DNA repair. It also inhibits Cdc25c, thereby regulating the onset of mitosis. The PLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271091 [Multi-domain]  Cd Length: 255  Bit Score: 113.87  E-value: 4.90e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVkmePDDDVST------LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14189   9 LGKGGFARCYEMTDLATNKTYAVKVI---PHSRVAKphqrekIVNEIELHRDLHHKHVVKFSHHFEDAENIYIFLELCSR 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:cd14189  86 KSLAHIWKARHTLLEPEVRYYLKQIISGLKYLHLKGILHRDLKLGNFFINENMELKVGDFGLAARLEPPEQRKKTICGTP 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKS-GYQPPrlkekGKWSAAFHNFIKVTL 255
Cdd:cd14189 166 NYLAPE---VLLRQGHGPESDVWSLGCVMYTLLCGNPP-FETLDLKETYRCIKQvKYTLP-----ASLSLPARHLLAGIL 236
                       250
                ....*....|....*..
gi 6005810  256 TKSPKKRPSATKMLSHQ 272
Cdd:cd14189 237 KRNPGDRLTLDQILEHE 253
STKc_ROCK_NDR_like cd05573
Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear ...
15-217 4.96e-28

Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear Dbf2-Related (NDR)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. The ROCK/NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270725 [Multi-domain]  Cd Length: 350  Bit Score: 116.23  E-value: 4.96e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALK------MVKMEpddDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd05573   1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKilrksdMLKRE---QIAHVRAERDILADADSPWIVRLHYAFQDEDHLY 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT--- 165
Cdd:cd05573  78 LVMEYMPGGDLMNLLIKYDVFPEETARFYIAELVLALDSLHKLGFIHRDIKPDNILLDADGHIKLADFGLCTKMNKSgdr 157
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  166 --------------------------LARRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFD 217
Cdd:cd05573 158 esylndsvntlfqdnvlarrrphkqrRVRAYSAVGTPDYIAPEV----LRGtGYGPECDWWSLGVILYEMLYGFPPFYS 232
STKc_Nek4 cd08223
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
17-271 5.35e-28

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek4 is highly abundant in the testis. Its specific function is unknown. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270862 [Multi-domain]  Cd Length: 257  Bit Score: 113.69  E-value: 5.35e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSylWLQK---LWICM 91
Cdd:cd08223   2 YQFLRVIGKGSYGEVWLVRHKRDRKQYVIKKLNLKnaSKRERKAAEQEAKLLSKLKHPNIVSYKES--FEGEdgfLYIVM 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGslqDIY-----QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd08223  80 GFCEGG---DLYtrlkeQKGVLLEERQVVEWFVQIAMALQYMHERNILHRDLKTQNIFLTKSNIIKVGDLGIARVLESSS 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKekgKWSAA 246
Cdd:cd08223 157 DMATTLIGTPYYMSPELFS---NKPYNHKSDVWALGCCVYEMATLKHA-FNAKDMNSLVYKILEGKLPPMPK---QYSPE 229
                       250       260
                ....*....|....*....|....*
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd08223 230 LGELIKAMLHQDPEKRPSVKRILRQ 254
STKc_HAL4_like cd13994
Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs ...
23-208 1.03e-27

Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of HAL4, Saccharomyces cerevisiae Ptk2/Stk2, and similar fungal proteins. Proteins in this subfamily are involved in regulating ion transporters. In budding and fission yeast, HAL4 promotes potassium ion uptake, which increases cellular resistance to other cations such as sodium, lithium, and calcium ions. HAL4 stabilizes the major high-affinity K+ transporter Trk1 at the plasma membrane under low K+ conditions, which prevents endocytosis and vacuolar degradation. Budding yeast Ptk2 phosphorylates and regulates the plasma membrane H+ ATPase, Pma1. The HAL4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270896 [Multi-domain]  Cd Length: 265  Bit Score: 113.17  E-value: 1.03e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA--RDKVSGDLVALKMVKMEPDDD-----VSTLQKEILILKTCRHANIVA-------YHGsylwlqKLW 88
Cdd:cd13994   1 IGKGATSVVRIVtkKNPRSGVLYAVKEYRRRDDESkrkdyVKRLTSEYIISSKLHHPNIVKvldlcqdLHG------KWC 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT--- 165
Cdd:cd13994  75 LVMEYCPGGDLFTLIEKADSLSLEEKDCFFKQILRGVAYLHSHGIAHRDLKPENILLDEDGVLKLTDFGTAEVFGMPaek 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  166 LARRLS-FIGTPYWMAPEvaaVALKGGYN-ELCDIWSLGITAIEL 208
Cdd:cd13994 155 ESPMSAgLCGSEPYMAPE---VFTSGSYDgRAVDVWSCGIVLFAL 196
STKc_CDKL2_3 cd07846
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; ...
17-273 1.20e-27

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270836 [Multi-domain]  Cd Length: 286  Bit Score: 113.67  E-value: 1.20e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV--STLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd07846   3 YENLGLVGEGSYGMVMKCRHKETGQIVAIKKFLESEDDKMvkKIAMREIKMLKQLRHENLVNLIEVFRRKKRWYLVFEFV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIG 174
Cdd:cd07846  83 DHTVLDDLEKYPNGLDESRVRKYLFQILRGIDFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  175 TPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQpPLF----DVHPL------------RVLFLMTKS----GYQP 234
Cdd:cd07846 163 TRWYRAPELLVGDTK--YGKAVDVWAVGCLVTEMLTGE-PLFpgdsDIDQLyhiikclgnlipRHQELFQKNplfaGVRL 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  235 PRLKEK-------GKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQL 273
Cdd:cd07846 240 PEVKEVeplerryPKLSGVVIDLAKKCLHIDPDKRPSCSELLHHEF 285
STKc_PDK1 cd05581
Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs ...
17-265 1.24e-27

Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. It is essential for normal embryo development and is important in regulating cell volume. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270733 [Multi-domain]  Cd Length: 278  Bit Score: 113.08  E-value: 1.24e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALK------MVKMEPDDDVsTLQKEILilKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd05581   3 FKFGKPLGEGSYSTVVLAKEKETGKEYAIKvldkrhIIKEKKVKYV-TIEKEVL--SRLAHPGIVKLYYTFQDESKLYFV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL---- 166
Cdd:cd05581  80 LEYAPNGDLLEYIRKYGSLDEKCTRFYTAEIVLALEYLHSKGIIHRDLKPENILLDEDMHIKITDFGTAKVLGPDSspes 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 -------------ARRLSFIGTPYWMAPEVaavaLKGGY-NELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGY 232
Cdd:cd05581 160 tkgdadsqiaynqARAASFVGTAEYVSPEL----LNEKPaGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIVKLEY 235
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  233 -QPPRLKEKGKwsaafhNFIKVTLTKSPKKRPSA 265
Cdd:cd05581 236 eFPENFPPDAK------DLIQKLLVLDPSKRLGV 263
STKc_PhKG cd14093
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs ...
17-271 1.62e-27

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). Each subunit has tissue-specific isoforms or splice variants. Vertebrates contain two isoforms of the gamma subunit (gamma 1 and gamma 2). The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270995 [Multi-domain]  Cd Length: 272  Bit Score: 112.83  E-value: 1.62e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM--------EPDDDVSTLQKEILILKTC-RHANIVAYHGSYLWLQKL 87
Cdd:cd14093   5 YEPKEILGRGVSSTVRRCIEKETGQEFAVKIIDItgekssenEAEELREATRREIEILRQVsGHPNIIELHDVFESPTFI 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GAT 165
Cdd:cd14093  85 FLVFELCRKGELFDYLTEVVTLSEKKTRRIMRQLFEAVEFLHSLNIVHRDLKPENILLDDNLNVKISDFGFATRLdeGEK 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LaRRLsfIGTPYWMAPEVAAVAL---KGGYNELCDIWSLGITAIELAELQPPLFdvHPLRVLFLmtksgyqppRLKEKGK 242
Cdd:cd14093 165 L-REL--CGTPGYLAPEVLKCSMydnAPGYGKEVDMWACGVIMYTLLAGCPPFW--HRKQMVML---------RNIMEGK 230
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  243 -------W---SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14093 231 yefgspeWddiSDTAKDLISKLLVVDPKKRLTAEEALEH 269
PKc_LIMK_like cd14065
Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of ...
23-208 2.20e-27

Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. Members of this subfamily include LIMK, Testicular or testis-specific protein kinase (TESK), and similar proteins. LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270967 [Multi-domain]  Cd Length: 252  Bit Score: 111.81  E-value: 2.20e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMePDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14065   1 LGKGFFGEVYKVTHRETGKVMVMKELKR-FDEQRSFL-KEVKLMRRLSHPNILRFIGVCVKDNKLNFITEYVNGGTLEEL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 Y-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG---EVRLADFGISAQIGATLAR------RLSF 172
Cdd:cd14065  79 LkSMDEQLPWSQRVSLAKDIASGMAYLHSKNIIHRDLNSKNCLVREANrgrNAVVADFGLAREMPDEKTKkpdrkkRLTV 158
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 6005810  173 IGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIEL 208
Cdd:cd14065 159 VGSPYWMAPEM----LRGeSYDEKVDVFSFGIVLCEI 191
STKc_PCTAIRE_like cd07844
Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
17-216 2.40e-27

Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. They share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270835 [Multi-domain]  Cd Length: 286  Bit Score: 112.47  E-value: 2.40e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd07844   2 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPfTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARRLSF--- 172
Cdd:cd07844  82 TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFG--------LARAKSVpsk 153
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  173 -----IGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQpPLF 216
Cdd:cd07844 154 tysneVVTLWYRPPDV----LLGSteYSTSLDMWGVGCIFYEMATGR-PLF 199
STKc_PFTAIRE2 cd07870
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer ...
20-213 2.49e-27

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. It shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270852 [Multi-domain]  Cd Length: 286  Bit Score: 112.75  E-value: 2.49e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd07870   5 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPfTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYW 178
Cdd:cd07870  85 AQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWY 164
                       170       180       190
                ....*....|....*....|....*....|....*
gi 6005810  179 MAPEVAAVALKggYNELCDIWSLGITAIELAELQP 213
Cdd:cd07870 165 RPPDVLLGATD--YSSALDIWGAGCIFIEMLQGQP 197
STKc_RSK_C cd14091
C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs ...
17-271 2.54e-27

C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), 90 kDa ribosomal protein S6 kinases (p90-RSKs), or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270993 [Multi-domain]  Cd Length: 291  Bit Score: 112.73  E-value: 2.54e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVstlqkEILiLKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14091   2 YEIKEEIGKGSYSVCKRCIHKATGKEYAVKIIdksKRDPSEEI-----EIL-LRYGQHPNIITLRDVYDDGNSVYLVTEL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQD-IYQVtGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISAQIGATLAR 168
Cdd:cd14091  76 LRGGELLDrILRQ-KFFSEREASAVMKTLTKTVEYLHSQGVVHRDLKPSNILYADESgdpeSLRICDFGFAKQLRAENGL 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTPYWMAPEVaavaLK-GGYNELCDIWSLGItaielaelqpplfdvhplrVLFLMTkSGYQP------------- 234
Cdd:cd14091 155 LMTPCYTANFVAPEV----LKkQGYDAACDIWSLGV-------------------LLYTML-AGYTPfasgpndtpevil 210
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  235 PRLKE------KGKW---SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14091 211 ARIGSgkidlsGGNWdhvSDSAKDLVRKMLHVDPSQRPTAAQVLQH 256
STKc_PASK cd14004
Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs ...
17-271 3.87e-27

Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PASK (or PASKIN) is a nutrient and energy sensor and thus, plays an important role in maintaining cellular energy homeostasis. It coordinates the utilization of glucose in response to metabolic demand. It contains an N-terminal PAS domain which directly interacts and inhibits a C-terminal catalytic kinase domain. The PAS domain serves as a sensory module for different environmental signals such as light, redox state, and various metabolites. Binding of ligands to the PAS domain causes structural changes which leads to kinase activation and the phosphorylation of substrates to trigger the appropriate cellular response. The PASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270906 [Multi-domain]  Cd Length: 256  Bit Score: 111.32  E-value: 3.87e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--------PDDDVSTLQKEILILKTCR---HANIVAYHGSYLWLQ 85
Cdd:cd14004   2 YTILKEMGEGAYGQVNLAIYKSKGKEVVIKFIFKErilvdtwvRDRKLGTVPLEIHILDTLNkrsHPNIVKLLDFFEDDE 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAG-SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd14004  82 FYYLVMEKHGSGmDLFDFIERKPNMDEKEAKYIFRQVADAVKHLHDQGIVHRDIKDENVILDGNGTIKLIDFGSAAYIKS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 tlARRLSFIGTPYWMAPEVAAVALKGGyNELcDIWSLGITAIELAELQPPLFDVhpLRVLflmtKSGYQPPRLKEKGKWS 244
Cdd:cd14004 162 --GPFDTFVGTIDYAAPEVLRGNPYGG-KEQ-DIWALGVLLYTLVFKENPFYNI--EEIL----EADLRIPYAVSEDLID 231
                       250       260
                ....*....|....*....|....*..
gi 6005810  245 aafhnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14004 232 -----LISRMLNRDVGDRPTIEELLTD 253
STKc_SnRK3 cd14663
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
17-271 4.76e-27

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK3 is represented in this cd. The SnRK3 group contains members also known as CBL-interacting protein kinase, salt overly sensitive 2, SOS3-interacting proteins and protein kinase S. These kinases interact with calcium-binding proteins such as SOS3, SCaBPs, and CBL proteins, and are involved in responses to salt stress and in sugar and ABA signaling. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271133 [Multi-domain]  Cd Length: 256  Bit Score: 110.96  E-value: 4.76e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14663   2 YELGRTLGEGTFAKVKFARNTKTGESVAIKIIDKEQVARegmVEQIKREIAIMKLLRHPNIVELHEVMATKTKIFFVMEL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL--S 171
Cdd:cd14663  82 VTGGELFSKIAKNGRLKEDKARKYFQQLIDAVDYCHSRGVFHRDLKPENLLLDEDGNLKISDFGLSALSEQFRQDGLlhT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYN-ELCDIWSLG-ITAIELAELQPplFDVHPLRVLFL-MTKSGYQPPRlkekgkW-SAAF 247
Cdd:cd14663 162 TCGTPNYVAPEVLA---RRGYDgAKADIWSCGvILFVLLAGYLP--FDDENLMALYRkIMKGEFEYPR------WfSPGA 230
                       250       260
                ....*....|....*....|....
gi 6005810  248 HNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14663 231 KSLIKRILDPNPSTRITVEQIMAS 254
STKc_DCKL cd14095
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called ...
16-271 4.97e-27

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called Doublecortin-like and CAM kinase-like); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL (or DCAMKL) proteins belong to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL proteins contain a C-terminal kinase domain with similarity to CAMKs. They are involved in the regulation of cAMP signaling. Vertebrates contain three DCKL proteins (DCKL1-3); DCKL1 and 2 also contain a serine, threonine, and proline rich domain (SP), while DCKL3 contains only a single DCX domain instead of tandem domains. The DCKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270997 [Multi-domain]  Cd Length: 258  Bit Score: 110.88  E-value: 4.97e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14095   1 KYDIGRVIGDGNFAVVKECRDKATDKEYALKIIdKAKCKGKEHMIENEVAILRRVKHPNIVQLIEEYDTDTELYLVMELV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE----VRLADFGIsaqigATLARRL 170
Cdd:cd14095  81 KGGDLFDAITSSTKFTERDASRMVTDLAQALKYLHSLSIVHRDIKPENLLVVEHEDgsksLKLADFGL-----ATEVKEP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFI--GTPYWMAPEVAAvalKGGYNELCDIWSLG-ITAIEL---------AELQPPLFDvhplrvLFLMTKSGYQPPrlk 238
Cdd:cd14095 156 LFTvcGTPTYVAPEILA---ETGYGLKVDIWAAGvITYILLcgfppfrspDRDQEELFD------LILAGEFEFLSP--- 223
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  239 ekgKW---SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14095 224 ---YWdniSDSAKDLISRMLVVDPEKRYSAGQVLDH 256
STKc_CaMKI_beta cd14169
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
17-275 5.17e-27

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271071 [Multi-domain]  Cd Length: 277  Bit Score: 111.52  E-value: 5.17e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd14169   5 YELKEKLGEGAFSEVVLAQERGSQRLVALKCIpKKALRGKEAMVENEIAVLRRINHENIVSLEDIYESPTHLYLAMELVT 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISA-QIGATLArrlS 171
Cdd:cd14169  85 GGELFDRIIERGSYTEKDASQLIGQVLQAVKYLHQLGIVHRDLKPENLLYATPFEdskIMISDFGLSKiEAQGMLS---T 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKW---SAAFH 248
Cdd:cd14169 162 ACGTPGYVAPELLE---QKPYGKAVDVWAIGVISYILLCGYPPFYDENDSELFNQILKAEYE----FDSPYWddiSESAK 234
                       250       260
                ....*....|....*....|....*..
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14169 235 DFIRHLLERDPEKRFTCEQALQHPWIS 261
STKc_PCTAIRE3 cd07871
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer ...
17-213 5.92e-27

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles. In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270853 [Multi-domain]  Cd Length: 288  Bit Score: 111.64  E-value: 5.92e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd07871   7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPcTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd07871  87 SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVT 166
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 6005810  176 PYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQP 213
Cdd:cd07871 167 LWYRPPDVLLGSTE--YSTPIDMWGVGCILYEMATGRP 202
STKc_Nek7 cd08229
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
16-270 6.10e-27

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270866 [Multi-domain]  Cd Length: 292  Bit Score: 111.66  E-value: 6.10e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd08229  25 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARAdciKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR 168
Cdd:cd08229 105 LADAGDLSRMIKHFKKqkrlIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF-DVHPLRVLFLMTKSGYQPPRLKEkgKWSAAF 247
Cdd:cd08229 185 AHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYgDKMNLYSLCKKIEQCDYPPLPSD--HYSEEL 259
                       250       260
                ....*....|....*....|...
gi 6005810  248 HNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd08229 260 RQLVNMCINPDPEKRPDITYVYD 282
STKc_CDK1_euk cd07861
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher ...
17-216 1.03e-26

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis as well as neuronal apoptosis in neurodegenerative diseases. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270845 [Multi-domain]  Cd Length: 285  Bit Score: 110.97  E-value: 1.03e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF- 93
Cdd:cd07861   2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEgvPSTAIREISLLKELQHPNIVCLEDVLMQENRLYLVFEFl 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 -CGAGSLQDIYQVTGSL-SELQISYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd07861  82 sMDLKKYLDSLPKGKYMdAELVKSYL-YQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  172 FIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAeLQPPLF 216
Cdd:cd07861 161 EVVTLWYRAPEV----LLGSprYSTPVDIWSIGTIFAEMA-TKKPLF 202
STKc_MAPK15-like cd07852
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and ...
4-276 1.07e-26

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and similar MAPKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270841 [Multi-domain]  Cd Length: 337  Bit Score: 111.88  E-value: 1.07e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    4 VDPDIFNRdprdhYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVSTLQKEILILKTCR-HANIVayhgs 80
Cdd:cd07852   1 IDKHILRR-----YEILKKLGKGAYGIVWKAIDKKTGEVVALKKIfdAFRNATDAQRTFREIMFLQELNdHPNII----- 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   81 ylwlqKLWICMEfcgAGSLQDIYQV-------------TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND 147
Cdd:cd07852  71 -----KLLNVIR---AENDKDIYLVfeymetdlhavirANILEDIHKQYIMYQLLKALKYLHSGGVIHRDLKPSNILLNS 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  148 AGEVRLADFGisaqigatLARRLS-------------FIGTPYWMAPEVaavaLKGG--YNELCDIWSLG-ItaieLAEL 211
Cdd:cd07852 143 DCRVKLADFG--------LARSLSqleeddenpvltdYVATRWYRAPEI----LLGStrYTKGVDMWSVGcI----LGEM 206
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  212 --QPPLF----------------------DVHPLRVLFLMT----KSGYQPPRLKEK-GKWSAAFHNFIKVTLTKSPKKR 262
Cdd:cd07852 207 llGKPLFpgtstlnqlekiievigrpsaeDIESIQSPFAATmlesLPPSRPKSLDELfPKASPDALDLLKKLLVFNPNKR 286
                       330
                ....*....|....
gi 6005810  263 PSATKMLSHQLVSQ 276
Cdd:cd07852 287 LTAEEALRHPYVAQ 300
STKc_CCRK cd07832
Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the ...
17-217 1.34e-26

Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed; this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270826 [Multi-domain]  Cd Length: 287  Bit Score: 110.50  E-value: 1.34e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCR-HANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd07832   2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRKLEGGIPNQalREIKALQACQgHPYVVKLRDVFPHGTGFVLVFEY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF- 172
Cdd:cd07832  82 MLSSLSEVLRDEERPLTEAQVKRYMRMLLKGVAYMHANRIMHRDLKPANLLISSTGVLKIADFGLARLFSEEDPRLYSHq 161
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  173 IGTPYWMAPEVAAVALKggYNELCDIWSLGITaieLAEL--QPPLFD 217
Cdd:cd07832 162 VATRWYRAPELLYGSRK--YDEGVDLWAVGCI---FAELlnGSPLFP 203
STKc_CaMKII cd14086
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
15-276 1.70e-26

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. In addition, CaMKII contains a C-terminal association domain that facilitates oligomerization. There are four CaMKII proteins (alpha, beta, gamma, delta) encoded by different genes; each gene undergoes alternative splicing to produce more than 30 isoforms. CaMKII-alpha and -beta are enriched in neurons while CaMKII-gamma and -delta are predominant in myocardium. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. It is a major component of the postsynaptic density and is critical in regulating synaptic plasticity including long-term potentiation. It is critical in regulating ion channels and proteins involved in myocardial excitation-contraction and excitation-transcription coupling. Excessive CaMKII activity promotes processes that contribute to heart failure and arrhythmias. The CaMKII subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270988 [Multi-domain]  Cd Length: 292  Bit Score: 110.20  E-value: 1.70e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14086   1 DEYDLKEELGKGAFSVVRRCVQKSTGQEFAAKIIntKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSL-QDIyqVTGSL-SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAQIGATLA 167
Cdd:cd14086  81 LVTGGELfEDI--VAREFySEADASHCIQQILESVNHCHQNGIVHRDLKPENLLLaskSKGAAVKLADFGLAIEVQGDQQ 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRvLFLMTKSG---YQPPrlkekgKWS 244
Cdd:cd14086 159 AWFGFAGTPGYLSPEVLR---KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGaydYPSP------EWD 228
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  245 ---AAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14086 229 tvtPEAKDLINQMLTVNPAKRITAAEALKHPWICQ 263
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
15-271 2.26e-26

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 108.89  E-value: 2.26e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14116   5 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLfkaQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaqIGATLARRLS 171
Cdd:cd14116  85 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF-LMTKSGYQ-PPRLKEKGKwsaafh 248
Cdd:cd14116 163 LCGTLDYLPPEM----IEGrMHDEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYkRISRVEFTfPDFVTEGAR------ 231
                       250       260
                ....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14116 232 DLISRLLKHNPSQRPMLREVLEH 254
STKc_CaMKI_delta cd14168
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
12-275 2.31e-26

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271070 [Multi-domain]  Cd Length: 301  Bit Score: 110.14  E-value: 2.31e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd14168   7 DIKKIFEFKEVLGTGAFSEVVLAEERATGKLFAVKCIpKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAQIGATLA 167
Cdd:cd14168  87 MQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYfsqDEESKIMISDFGLSKMEGKGDV 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSfIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprlKEKGKW---S 244
Cdd:cd14168 167 MSTA-CGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKADYE----FDSPYWddiS 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  245 AAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14168 239 DSAKDFIRNLMEKDPNKRYTCEQALRHPWIA 269
PKc_DYRK_like cd14133
Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like ...
17-271 2.51e-26

Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like protein kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity DYRKs and YAK1, as well as the S/T kinases (STKs), HIPKs. DYRKs and YAK1 autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. Proteins in this subfamily play important roles in cell proliferation, differentiation, survival, growth, and development. The DYRK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271035 [Multi-domain]  Cd Length: 262  Bit Score: 108.89  E-value: 2.51e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD-DDVStlQKEILILK------TCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd14133   1 YEVLEVLGKGTFGQVVKCYDLLTGEEVALKIIKNNKDyLDQS--LDEIRLLEllnkkdKADKYHIVRLKDVFYFKNHLCI 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAG----SLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLADFGISAQIG 163
Cdd:cd14133  79 VFELLSQNlyefLKQNKFQ---YLSLPRIRKIAQQILEALVFLHSLGLIHCDLKPENILLasYSRCQIKIIDFGSSCFLT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 atlARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAeLQPPLFD----VHPL-RVLFLMtksGYQPPRLK 238
Cdd:cd14133 156 ---QRLYSYIQSRYYRAPE---VILGLPYDEKIDMWSLGCILAELY-TGEPLFPgaseVDQLaRIIGTI---GIPPAHML 225
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  239 EKGKWS-AAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14133 226 DQGKADdELFVDFLKKLLEIDPKERPTASQALSH 259
STKc_DRAK cd14106
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
15-271 4.24e-26

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs, also called STK17, were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. They may play a role in apoptotic signaling. The DRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271008 [Multi-domain]  Cd Length: 268  Bit Score: 108.59  E-value: 4.24e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQR-LGGGTYGEVFKARDKVSGDLVALKMVKM--EPDDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWIC 90
Cdd:cd14106   7 EVYTVESTpLGRGKFAVVRKCIHKETGKEYAAKFLRKrrRGQDCRNEILHEIAVLELCKdCPRVVNLHEVYETRSELILI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDA---GEVRLADFGISAQIGATLA 167
Cdd:cd14106  87 LELAAGGELQTLLDEEECLTEADVRRLMRQILEGVQYLHERNIVHLDLKPQNILLTSEfplGDIKLCDFGISRVIGEGEE 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRlSFIGTPYWMAPEVAAvalkggYNELC---DIWSLGI-TAIELAELQPplFDVHPLRVLFL-MTKSGYQPPRLKEKGK 242
Cdd:cd14106 167 IR-EILGTPDYVAPEILS------YEPISlatDMWSIGVlTYVLLTGHSP--FGGDDKQETFLnISQCNLDFPEELFKDV 237
                       250       260
                ....*....|....*....|....*....
gi 6005810  243 WSAAFhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14106 238 SPLAI-DFIKRLLVKDPEKRLTAKECLEH 265
STKc_CaMKK2 cd14199
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; ...
15-275 5.81e-26

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK2, also called CaMKK beta, is one of the most versatile CaMKs. It is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. CaMKK2 contains unique N- and C-terminal domains and a central catalytic kinase domain that is followed by a regulatory domain that bears overlapping autoinhibitory and CaM-binding regions. It can be activated by signaling through G-coupled receptors, IP3 receptors, plasma membrane ion channels, and Toll-like receptors. Thus, CaMKK2 acts as a molecular hub that is capable of receiving and decoding signals from diverse pathways. The CaMKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271101 [Multi-domain]  Cd Length: 286  Bit Score: 108.51  E-value: 5.81e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--------------------------MEPDDDVSTLQKEILILKT 68
Cdd:cd14199   2 NQYKLKDEIGKGSYGVVKLAYNEDDNTYYAMKVLSkkklmrqagfprrppprgaraapegcTQPRGPIERVYQEIAILKK 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   69 CRHANIVAY----------HgsylwlqkLWICMEFCGAGSLQDIyQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDI 138
Cdd:cd14199  82 LDHPNVVKLvevlddpsedH--------LYMVFELVKQGPVMEV-PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDV 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  139 KGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDV 218
Cdd:cd14199 153 KPSNLLVGEDGHIKIADFGVSNEFEGSDALLTNTVGTPAFMAPETLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 232
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  219 hplRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14199 233 ---RILSLHSKIKTQPLEFPDQPDISDDLKDLLFRMLDKNPESRISVPEIKLHPWVT 286
STKc_EIF2AK1_HRI cd14049
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
17-272 6.19e-26

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Heme-Regulated Inhibitor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HRI (or EIF2AK1) contains an N-terminal regulatory heme-binding domain and a C-terminal catalytic kinase domain. It is suppressed under normal conditions by binding of the heme iron, and is activated during heme deficiency. It functions as a critical regulator that ensures balanced synthesis of globins and heme, in order to form stable hemoglobin during erythroid differentiation and maturation. HRI also protects cells and enhances survival under iron-deficient conditions. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The HRI subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270951 [Multi-domain]  Cd Length: 284  Bit Score: 108.36  E-value: 6.19e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALK--MVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSylWLQK----LWIC 90
Cdd:cd14049   8 FEEIARLGKGGYGKVYKVRNKLDGQYYAIKkiLIKKVTKRDCMKVLREVKVLAGLQHPNIVGYHTA--WMEHvqlmLYIQ 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAgSLQD----------IYQVTGSLSELQ----ISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG-EVRLAD 155
Cdd:cd14049  86 MQLCEL-SLWDwivernkrpcEEEFKSAPYTPVdvdvTTKILQQLLEGVTYIHSMGIVHRDLKPRNIFLHGSDiHVRIGD 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  156 FGIS-------AQIGATLARRLSF-----IGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELaeLQPPLFDVHPLR 222
Cdd:cd14049 165 FGLAcpdilqdGNDSTTMSRLNGLthtsgVGTCLYAAPE----QLEGShYDFKSDMYSIGVILLEL--FQPFGTEMERAE 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  223 VLFLMtKSGYQPPRLKEKGKWSAafhNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14049 239 VLTQL-RNGQIPKSLCKRWPVQA---KYIKLLTSTEPSERPSASQLLESE 284
STKc_BRSK1_2 cd14081
Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the ...
17-274 7.62e-26

Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BRSK1, also called SAD-B or SAD1 (Synapses of Amphids Defective homolog 1), and BRSK2, also called SAD-A, are highly expressed in mammalian forebrain. They play important roles in establishing neuronal polarity. BRSK1/2 double knock-out mice die soon after birth, showing thin cerebral cortices due to disordered subplate layers and neurons that lack distinct axons and dendrites. BRSK1 regulates presynaptic neurotransmitter release. Its activity fluctuates during cell cysle progression and it acts as a regulator of centrosome duplication. BRSK2 is also abundant in pancreatic islets, where it is involved in the regulation of glucose-stimulated insulin secretion. The BRSK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270983 [Multi-domain]  Cd Length: 255  Bit Score: 107.34  E-value: 7.62e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQK---EILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14081   3 YRLGKTLGKGQTGLVKLAKHCVTGQKVAIKIVNKEKLSKESVLMKverEIAIMKLIEHPNVLKLYDVYENKKYLYLVLEY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA-QIGATLARrlSF 172
Cdd:cd14081  83 VSGGELFDYLVKKGRLTEKEARKFFRQIISALDYCHSHSICHRDLKPENLLLDEKNNIKIADFGMASlQPEGSLLE--TS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVaavaLKG-GYNEL-CDIWSLGItaIELAELQPPL-FDVHPLRVLFLMTKSG-YQPPRlkekgKWSAAFH 248
Cdd:cd14081 161 CGSPHYACPEV----IKGeKYDGRkADIWSCGV--ILYALLVGALpFDDDNLRQLLEKVKRGvFHIPH-----FISPDAQ 229
                       250       260
                ....*....|....*....|....*.
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14081 230 DLLRRMLEVNPEKRITIEEIKKHPWF 255
STKc_PKB_gamma cd05593
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); ...
11-280 9.04e-26

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270745 [Multi-domain]  Cd Length: 348  Bit Score: 109.79  E-value: 9.04e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKL 87
Cdd:cd05593  11 RKTMNDFDYLKLLGKGTFGKVILVREKASGKYYAMKILKKEviiAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLA 167
Cdd:cd05593  91 CFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlkekgKWSAAF 247
Cdd:cd05593 171 TMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR-----TLSADA 242
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  248 HNFIKVTLTKSPKKR-----PSATKMLSHQLVSqpGLN 280
Cdd:cd05593 243 KSLLSGLLIKDPNKRlgggpDDAKEIMRHSFFT--GVN 278
STKc_MLTK cd14060
Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated ...
24-270 9.12e-26

Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLTK, also called zipper sterile-alpha-motif kinase (ZAK), contains a catalytic kinase domain and a leucine zipper. There are two alternatively-spliced variants, MLTK-alpha and MLTK-beta. MLTK-alpha contains a sterile-alpha-motif (SAM) at the C-terminus. MLTK regulates the c-Jun N-terminal kinase, extracellular signal-regulated kinase, p38 MAPK, and NF-kB pathways. ZAK is the MAP3K involved in the signaling cascade that leads to the ribotoxic stress response initiated by cellular damage due to Shiga toxins and ricin. It may also play a role in cell transformation and cancer development. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.The MLTK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270962 [Multi-domain]  Cd Length: 242  Bit Score: 106.97  E-value: 9.12e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   24 GGGTYGEVFKARDKVSGDLVALK-MVKMEpdddvstlqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDi 102
Cdd:cd14060   2 GGGSFGSVYRAIWVSQDKEVAVKkLLKIE---------KEAEILSVLSHRNIIQFYGAILEAPNYGIVTEYASYGSLFD- 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYV---CREVLQGLAYLHSQ---KKIHRDIKGANILINDAGEVRLADFGISAQIGATLarRLSFIGTP 176
Cdd:cd14060  72 YLNSNESEEMDMDQImtwATDIAKGMHYLHMEapvKVIHRDLKSRNVVIAADGVLKICDFGASRFHSHTT--HMSLVGTF 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGyqpPRLKEKGKWSAAFHNFIKVTL 255
Cdd:cd14060 150 PWMAPEV----IQSlPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKN---ERPTIPSSCPRSFAELMRRCW 222
                       250
                ....*....|....*
gi 6005810  256 TKSPKKRPSATKMLS 270
Cdd:cd14060 223 EADVKERPSFKQIIG 237
PTZ00024 PTZ00024
cyclin-dependent protein kinase; Provisional
23-216 9.89e-26

cyclin-dependent protein kinase; Provisional


Pssm-ID: 240233 [Multi-domain]  Cd Length: 335  Bit Score: 109.08  E-value: 9.89e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    23 LGGGTYGEVFKARDKVSGDLVALKMVKM-EPDDDVS-------------TLQKEILILKTCRHANIVAYHGSYLwlQKLW 88
Cdd:PTZ00024  17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIiEISNDVTkdrqlvgmcgihfTTLRELKIMNEIKHENIMGLVDVYV--EGDF 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    89 IC--MEFCgAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG--- 163
Cdd:PTZ00024  95 INlvMDIM-ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGypp 173
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810   164 --------ATLARRL---SFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAeLQPPLF 216
Cdd:PTZ00024 174 ysdtlskdETMQRREemtSKVVTLWYRAPELLMGAEK--YHFAVDMWSVGCIFAELL-TGKPLF 234
PK_STRAD_alpha cd08227
Pseudokinase domain of STE20-related kinase adapter protein alpha; The pseudokinase domain ...
34-276 1.08e-25

Pseudokinase domain of STE20-related kinase adapter protein alpha; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173767 [Multi-domain]  Cd Length: 327  Bit Score: 108.88  E-value: 1.08e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   34 ARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIY--QVTGSL 109
Cdd:cd08227  19 ARYKPTGEYVTVRRINLEacTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIctHFMDGM 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  110 SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADF-GISAQIGATLARRLSFIGTPY------WMAPE 182
Cdd:cd08227  99 SELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLrSNLSMINHGQRLRVVHDFPKYsvkvlpWLSPE 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  183 VAAVALKgGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF---------LMTKSGYQPPRLKEKGKWSAA------- 246
Cdd:cd08227 179 VLQQNLQ-GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLeklngtvpcLLDTTTIPAEELTMKPSRSGAnsglges 257
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  247 -------------------------FHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd08227 258 ttvstprpsngessshpynrtfsphFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312
PTKc_Fes_like cd05041
Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; ...
21-207 1.37e-25

Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions.


Pssm-ID: 270637 [Multi-domain]  Cd Length: 251  Bit Score: 106.76  E-value: 1.37e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL 99
Cdd:cd05041   1 EKIGRGNFGDVYRGVLKPDNTEVAVKTCRETlPPDLKRKFLQEARILKQYDHPNIVKLIGVCVQKQPIMIVMELVPGGSL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA---TLARRLSFIgt 175
Cdd:cd05041  81 LTFLRKKGArLTVKQLLQMCLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEDgeyTVSDGLKQI-- 158
                       170       180       190
                ....*....|....*....|....*....|....
gi 6005810  176 PY-WMAPEvaavALK-GGYNELCDIWSLGITAIE 207
Cdd:cd05041 159 PIkWTAPE----ALNyGRYTSESDVWSFGILLWE 188
STKc_ERK1_2_like cd07849
Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine ...
9-276 1.72e-25

Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270839 [Multi-domain]  Cd Length: 336  Bit Score: 108.55  E-value: 1.72e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    9 FNRDPRdhYDLLQRLGGGTYGEVFKARDKVSGDLVALKmvKMEPDDD----VSTLqKEILILKTCRHANIVAYH-----G 79
Cdd:cd07849   1 FDVGPR--YQNLSYIGEGAYGMVCSAVHKPTGQKVAIK--KISPFEHqtycLRTL-REIKILLRFKHENIIGILdiqrpP 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   80 SYLWLQKLWICMEFCGAgslqDIYQV--TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd07849  76 TFESFKDVYIVQELMET----DLYKLikTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFG 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 IsAQIGATLARRLSF----IGTPYWMAPEVAAVAlkGGYNELCDIWSLGITaieLAEL--QPPLFD--------VHPLRV 223
Cdd:cd07849 152 L-ARIADPEHDHTGFlteyVATRWYRAPEIMLNS--KGYTKAIDIWSVGCI---LAEMlsNRPLFPgkdylhqlNLILGI 225
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  224 LFLMTKSGYQ---PPRLKE---------KGKWSAAFHN-------FIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd07849 226 LGTPSQEDLNciiSLKARNyikslpfkpKVPWNKLFPNadpkaldLLDKMLTFNPHKRITVEEALAHPYLEQ 297
STKc_PRKX_like cd05612
Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of ...
15-220 2.22e-25

Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PRKX-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270763 [Multi-domain]  Cd Length: 292  Bit Score: 107.14  E-value: 2.22e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMePD----DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd05612   1 DDFERIKTIGTGTFGRVHLVRDRISEHYYALKVMAI-PEvirlKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgatLARRL 170
Cdd:cd05612  80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL---RDRTW 156
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHP 220
Cdd:cd05612 157 TLCGTPEYLAPEVIQ---SKGHNKAVDWWALGILIYEMLVGYPPFFDDNP 203
STKc_MELK cd14078
Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; ...
15-271 2.88e-25

Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MELK is a cell cycle dependent protein which functions in cytokinesis, cell cycle, apoptosis, cell proliferation, and mRNA processing. It is found upregulated in many types of cancer cells, playing an indispensable role in cancer cell survival. It makes an attractive target in the design of inhibitors for use in the treatment of a wide range of human cancer. The MELK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270980 [Multi-domain]  Cd Length: 257  Bit Score: 105.93  E-value: 2.88e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALK-MVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14078   3 KYYELHETIGSGGFAKVKLATHILTGEKVAIKiMDKKALGDDLPRVKTEIEALKNLSHQHICRLYHVIETDNKIFMVLEY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDiYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd14078  83 CPGGELFD-YIVAKDrLSEDEARVFFRQIVSAVAYVHSQGYAHRDLKPENLLLDEDQNLKLIDFGLCAKPKGGMDHHLET 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 -IGTPYWMAPE-VAAVALKGgyNElCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSG-YQPPRlkekgkW-SAAFH 248
Cdd:cd14078 162 cCGSPAYAAPElIQGKPYIG--SE-ADVWSMGVLLYALLCGFLP-FDDDNVMALYRKIQSGkYEEPE------WlSPSSK 231
                       250       260
                ....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14078 232 LLLDQMLQVDPKKRITVKELLNH 254
STKc_C-Raf cd14149
Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) ...
19-281 5.03e-25

Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. C-Raf, also known as Raf-1 or c-Raf-1, is ubiquitously expressed and was the first Raf identified. It was characterized as the acquired oncogene from an acutely transforming murine sarcoma virus (3611-MSV) and the transforming agent from the avian retrovirus MH2. C-Raf-deficient mice embryos die around midgestation with increased apoptosis of embryonic tissues, especially in the fetal liver. One of the main functions of C-Raf is restricting caspase activation to promote survival in response to specific stimuli such as Fas stimulation, macrophage apoptosis, and erythroid differentiation. C-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The C-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271051 [Multi-domain]  Cd Length: 283  Bit Score: 105.88  E-value: 5.03e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKArdKVSGDlVALKMVKM-EPD-DDVSTLQKEILILKTCRHANIVAYHGsYLWLQKLWICMEFCGA 96
Cdd:cd14149  16 LSTRIGSGSFGTVYKG--KWHGD-VAVKILKVvDPTpEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEG 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSL-QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsaqigATLARRLS---- 171
Cdd:cd14149  92 SSLyKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGL-----ATVKSRWSgsqq 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 ---FIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGK-WSAAF 247
Cdd:cd14149 167 veqPTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKnCPKAM 246
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6005810  248 HNFIKVTLTKSPKKRP------SATKMLSHQLvsqPGLNR 281
Cdd:cd14149 247 KRLVADCIKKVKEERPlfpqilSSIELLQHSL---PKINR 283
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
6-269 5.18e-25

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 109.57  E-value: 5.18e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     6 PDIFNRD------PRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAY 77
Cdd:PTZ00283  17 PDTFAKDeatakeQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEgmSEADKNRAQAEVCCLLNCDFFSIVKC 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    78 HGSYLW--------LQKLWICMEFCGAGSL-QDI---YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI 145
Cdd:PTZ00283  97 HEDFAKkdprnpenVLMIALVLDYANAGDLrQEIksrAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   146 NDAGEVRLADFGISAQIGATLARRL--SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRV 223
Cdd:PTZ00283 177 CSNGLVKLGDFGFSKMYAATVSDDVgrTFCGTPYYVAPEIWR---RKPYSKKADMFSLGVLLYELLTLKRP-FDGENMEE 252
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 6005810   224 LFLMTKSGYQPPRLKEKgkwSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:PTZ00283 253 VMHKTLAGRYDPLPPSI---SPEMQEIVTALLSSDPKRRPSSSKLL 295
STKc_CDK12 cd07864
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs ...
15-216 5.37e-25

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an RS domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270847 [Multi-domain]  Cd Length: 302  Bit Score: 106.04  E-value: 5.37e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKlwiCME 92
Cdd:cd07864   7 DKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEgfPITAIREIKILRQLNHRSVVNLKEIVTDKQD---ALD 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 F---CGAGSL------QDIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIs 159
Cdd:cd07864  84 FkkdKGAFYLvfeymdHDLMGLLESglvhFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL- 162
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  160 AQIGATLARRL--SFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITaieLAEL--QPPLF 216
Cdd:cd07864 163 ARLYNSEESRPytNKVITLWYRPPEL----LLGEerYGPAIDVWSCGCI---LGELftKKPIF 218
STKc_PCTAIRE2 cd07872
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer ...
17-213 5.39e-25

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143377 [Multi-domain]  Cd Length: 309  Bit Score: 106.23  E-value: 5.39e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd07872   8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPcTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd07872  88 KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVT 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQP 213
Cdd:cd07872 168 LWYRPPDV----LLGSseYSTQIDMWGVGCIFFEMASGRP 203
STKc_PCTAIRE1 cd07873
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer ...
17-213 6.19e-25

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270854 [Multi-domain]  Cd Length: 297  Bit Score: 105.86  E-value: 6.19e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd07873   4 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPcTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd07873  84 KDLKQYLDDCGNSINMHNVKLFLFQLLRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVT 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQP 213
Cdd:cd07873 164 LWYRPPDI----LLGStdYSTQIDMWGVGCIFYEMSTGRP 199
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
23-208 7.97e-25

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 104.48  E-value: 7.97e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMePDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14155   1 IGSGFFSEVYKVRHRTSGQVMALKMNTL-SSNRANML-REVQLMNRLSHPNILRFMGVCVHQGQLHALTEYINGGNLEQL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAQIGATLAR--RLSFIGTPY 177
Cdd:cd14155  79 LDSNEPLSWTVRVKLALDIARGLSYLHSKGIFHRDLTSKNCLIkrdENGYTAVVGDFGLAEKIPDYSDGkeKLAVVGSPY 158
                       170       180       190
                ....*....|....*....|....*....|..
gi 6005810  178 WMAPEVaavaLKGG-YNELCDIWSLGITAIEL 208
Cdd:cd14155 159 WMAPEV----LRGEpYNEKADVFSYGIILCEI 186
STKc_B-Raf cd14151
Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) ...
13-270 9.16e-25

Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. B-Raf activates ERK with the strongest magnitude, compared with other Raf kinases. Mice embryos deficient in B-Raf die around midgestation due to vascular hemorrhage caused by apoptotic endothelial cells. Mutations in B-Raf have been implicated in initiating tumorigenesis and tumor progression, and are found in malignant cutaneous melanoma, papillary thyroid cancer, as well as in ovarian and colorectal carcinomas. Most oncogenic B-Raf mutations are located at the activation loop of the kinase and surrounding regions; the V600E mutation accounts for around 90% of oncogenic mutations. The V600E mutant constitutively activates MEK, resulting in sustained activation of ERK. B-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The B-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271053 [Multi-domain]  Cd Length: 274  Bit Score: 104.76  E-value: 9.16e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKArdKVSGDlVALKM--VKMEPDDDVSTLQKEILILKTCRHANIVAYHGsYLWLQKLWIC 90
Cdd:cd14151   6 PDGQITVGQRIGSGSFGTVYKG--KWHGD-VAVKMlnVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSL-QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsaqigATLARR 169
Cdd:cd14151  82 TQWCEGSSLyHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL-----ATVKSR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LS-------FIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRL-KEKG 241
Cdd:cd14151 157 WSgshqfeqLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLsKVRS 236
                       250       260
                ....*....|....*....|....*....
gi 6005810  242 KWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd14151 237 NCPKAMKRLMAECLKKKRDERPLFPQILA 265
STKc_DAPK1 cd14194
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs ...
15-271 1.01e-24

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. It is Ca2+/calmodulin (CaM)-regulated and actin-associated protein that contains an N-terminal kinase domain followed by an autoinhibitory CaM binding region and a large C-terminal extension with multiple functional domains including ankyrin (ANK) repeats, a cytoskeletal binding domain, a Death domain, and a serine-rich tail. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. The DAPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271096 [Multi-domain]  Cd Length: 269  Bit Score: 104.72  E-value: 1.01e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---------PDDDVstlQKEILILKTCRHANIVAYHGSYLWLQ 85
Cdd:cd14194   5 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRrtkssrrgvSREDI---EREVSILKEIQHPNVITLHEVYENKT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISAQ 161
Cdd:cd14194  82 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNvpkpRIKIIDFGLAHK 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 IGATLARRLSFiGTPYWMAPEVAavalkgGYNEL---CDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQpprLK 238
Cdd:cd14194 162 IDFGNEFKNIF-GTPEFVAPEIV------NYEPLgleADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE---FE 231
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  239 EK--GKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14194 232 DEyfSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 266
STKc_ULK2 cd14201
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the ...
23-271 1.17e-24

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK2 is ubiquitously expressed and is essential in autophagy induction. It displays partially redundant functions with ULK1 and is able to compensate for the loss of ULK1 in non-selective autophagy. It also displays neuron-specific functions and is important in axon development. The ULK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271103 [Multi-domain]  Cd Length: 271  Bit Score: 104.32  E-value: 1.17e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDL-VALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14201  14 VGHGAFAVVFKGRHRKKTDWeVAIKSInKKNLSKSQILLGKEIKILKELQHENIVALYDVQEMPNSVFLVMEYCNGGDLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG---------EVRLADFGI-----SAQIGATL 166
Cdd:cd14201  94 DYLQAKGTLSEDTIRVFLQQIAAAMRILHSKGIIHRDLKPQNILLSYASrkkssvsgiRIKIADFGFarylqSNMMAATL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ArrlsfiGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHP--LRVLFLMTKSgYQPPRLKEKgkwS 244
Cdd:cd14201 174 C------GSPMYMAPE---VIMSQHYDAKADLWSIGTVIYQCLVGKPPFQANSPqdLRMFYEKNKN-LQPSIPRET---S 240
                       250       260
                ....*....|....*....|....*..
gi 6005810  245 AAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14201 241 PYLADLLLGLLQRNQKDRMDFEAFFSH 267
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
4-274 1.31e-24

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 108.18  E-value: 1.31e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     4 VDPDIFN--------------RDPRDHYDLLQRLGG--GTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILK 67
Cdd:PTZ00267  41 LDPEAYKkcvdlpegeevpesNNPREHMYVLTTLVGrnPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLA 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    68 TCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDiyQVTGSL------SELQISYVCREVLQGLAYLHSQKKIHRDIKGA 141
Cdd:PTZ00267 121 ACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNK--QIKQRLkehlpfQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSA 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   142 NILINDAGEVRLADFGISAQIGATLARRL--SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVH 219
Cdd:PTZ00267 199 NIFLMPTGIIKLGDFGFSKQYSDSVSLDVasSFCGTPYYLAPELWE---RKRYSKKADMWSLGVILYELLTLHRPFKGPS 275
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810   220 PLRVLFLMTKSGYQP-PrlkekGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:PTZ00267 276 QREIMQQVLYGKYDPfP-----CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFL 326
STKc_PFTAIRE1 cd07869
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer ...
15-275 1.34e-24

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143374 [Multi-domain]  Cd Length: 303  Bit Score: 105.16  E-value: 1.34e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd07869   5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPfTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd07869  85 VHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAE---LQPPLFDVH-PLRVLFLMTKS-------------GYQPPR 236
Cdd:cd07869 165 VTLWYRPPDVLLGSTE--YSTCLDMWGVGCIFVEMIQgvaAFPGMKDIQdQLERIFLVLGTpnedtwpgvhslpHFKPER 242
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  237 L---------KEKGKWSAAFH--NFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd07869 243 FtlyspknlrQAWNKLSYVNHaeDLASKLLQCFPKNRLSAQAALSHEYFS 292
STKc_ULK1 cd14202
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the ...
23-202 1.50e-24

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. It associates with three autophagy-related proteins (Atg13, FIP200 amd Atg101) to form the ULK1 complex. All fours proteins are essential for autophagosome formation. ULK1 is regulated by both mammalian target-of rapamycin complex 1 (mTORC1) and AMP-activated protein kinase (AMPK). mTORC1 negatively regulates the ULK1 complex in a nutrient-dependent manner while AMPK stimulates autophagy by inhibiting mTORC1. ULK1 also plays neuron-specific roles and is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, neurite extension, and axon branching. The ULK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271104 [Multi-domain]  Cd Length: 267  Bit Score: 103.94  E-value: 1.50e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDL-VALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14202  10 IGHGAFAVVFKGRHKEKHDLeVAVKCInKKNLAKSQTLLGKEIKILKELKHENIVALYDFQEIANSVYLVMEYCNGGDLA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG---------EVRLADFGISAQI-GATLARRL 170
Cdd:cd14202  90 DYLHTMRTLSEDTIRLFLQQIAGAMKMLHSKGIIHRDLKPQNILLSYSGgrksnpnniRIKIADFGFARYLqNNMMAATL 169
                       170       180       190
                ....*....|....*....|....*....|..
gi 6005810  171 SfiGTPYWMAPEvaaVALKGGYNELCDIWSLG 202
Cdd:cd14202 170 C--GSPMYMAPE---VIMSQHYDAKADLWSIG 196
STKc_DAPK cd14105
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs ...
15-271 1.79e-24

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. DAPK2 is also called DAPK-related protein 1 (DRP-1), while DAPK3 has also been named DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk). These proteins are ubiquitously expressed in adult tissues, are capable of cross talk with each other, and may act synergistically in regulating cell death. The DAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271007 [Multi-domain]  Cd Length: 269  Bit Score: 103.72  E-value: 1.79e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDD------DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd14105   5 DFYDIGEELGSGQFAVVKKCREKSTGLEYAAKFIKKRRSKasrrgvSREDIEREVSILRQVLHPNIITLHDVFENKTDVV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE----VRLADFGISAQIGA 164
Cdd:cd14105  85 LILELVAGGELFDFLAEKESLSEEEATEFLKQILDGVNYLHTKNIAHFDLKPENIMLLDKNVpiprIKLIDFGLAHKIED 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRlSFIGTPYWMAPEVAAvalkggYNEL---CDIWSLG-ITAIELAELQPPLFDVHPlRVLFLMTKSGYQPPRLKEK 240
Cdd:cd14105 165 GNEFK-NIFGTPEFVAPEIVN------YEPLgleADMWSIGvITYILLSGASPFLGDTKQ-ETLANITAVNYDFDDEYFS 236
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  241 GKwSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14105 237 NT-SELAKDFIRQLLVKDPRKRMTIQESLRH 266
STKc_ULK3 cd14121
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the ...
21-203 2.71e-24

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK3 mRNA is up-regulated in fibroblasts after Ras-induced senescence, and its overexpression induces both autophagy and senescence in a fibroblast cell line. ULK3, through its kinase activity, positively regulates Gli proteins, mediators of the Sonic hedgehog (Shh) signaling pathway that is implicated in tissue homeostasis maintenance and neurogenesis. It is inhibited by binding to Suppressor of Fused (Sufu). The ULK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271023 [Multi-domain]  Cd Length: 252  Bit Score: 102.75  E-value: 2.71e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKV-SGDLVALKMVKMEPDDDVST--LQKEILILKTCRHANIVAYHgSYLWLQK-LWICMEFCGA 96
Cdd:cd14121   1 EKLGSGTYATVYKAYRKSgAREVVAVKCVSKSSLNKASTenLLTEIELLKKLKHPHIVELK-DFQWDEEhIYLIMEYCSG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSElqisYVCREVLQGLA----YLHSQKKIHRDIKGANILINDAGEV--RLADFGIsAQIGATLARRL 170
Cdd:cd14121  80 GDLSRFIRSRRTLPE----STVRRFLQQLAsalqFLREHNISHMDLKPQNLLLSSRYNPvlKLADFGF-AQHLKPNDEAH 154
                       170       180       190
                ....*....|....*....|....*....|...
gi 6005810  171 SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGI 203
Cdd:cd14121 155 SLRGSPLYMAPE---MILKKKYDARVDLWSVGV 184
PLN00009 PLN00009
cyclin-dependent kinase A; Provisional
15-216 3.13e-24

cyclin-dependent kinase A; Provisional


Pssm-ID: 177649 [Multi-domain]  Cd Length: 294  Bit Score: 103.74  E-value: 3.13e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:PLN00009   2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEgvPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    93 FCGAgslqDIYQVTGSLSELQ-----ISYVCREVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADFGISAQIGATL 166
Cdd:PLN00009  82 YLDL----DLKKHMDSSPDFAknprlIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDrRTNALKLADFGLARAFGIPV 157
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 6005810   167 ARRLSFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAElQPPLF 216
Cdd:PLN00009 158 RTFTHEVVTLWYRAPEI----LLGSrhYSTPVDIWSVGCIFAEMVN-QKPLF 204
STKc_Aurora-B_like cd14117
Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs ...
15-274 3.48e-24

Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). This subfamily includes Aurora-B and Aurora-C. Aurora-B is most active at the transition during metaphase to the end of mitosis. It associates with centromeres, relocates to the midzone of the central spindle, and concentrates at the midbody during cell division. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. INCENP participates in the activation of Aurora-B in a two-step process: first by binding to form an intermediate state of activation and the phosphorylation of its C-terminal TSS motif to generate the fully active kinase. The Aurora-B subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271019 [Multi-domain]  Cd Length: 270  Bit Score: 103.02  E-value: 3.48e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14117   6 DDFDIGRPLGKGKFGNVYLAREKQSKFIVALKVLfksQIEKEGVEHQLRREIEIQSHLRHPNILRLYNYFHDRKRIYLIL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaqIGATLARRLS 171
Cdd:cd14117  86 EYAPRGELYKELQKHGRFDEQRTATFMEELADALHYCHEKKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRT 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKwsaafHNF 250
Cdd:cd14117 164 MCGTLDYLPPEM----IEGrTHDEKVDLWCIGVLCYELLVGMPPFESASHTETYRRIVKVDLKFPPFLSDGS-----RDL 234
                       250       260
                ....*....|....*....|....
gi 6005810  251 IKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14117 235 ISKLLRYHPSERLPLKGVMEHPWV 258
STKc_A-Raf cd14150
Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) ...
19-239 5.42e-24

Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A-Raf cooperates with C-Raf in regulating ERK transient phosphorylation that is associated with cyclin D expression and cell cycle progression. Mice deficient in A-Raf are born alive but show neurological and intestinal defects. A-Raf demonstrates low kinase activity to MEK, compared with B- and C-Raf, and may also have alternative functions other than in the ERK signaling cascade. It regulates the M2 type pyruvate kinase, a key glycolytic enzyme. It also plays a role in endocytic membrane trafficking. A-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The A-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271052 [Multi-domain]  Cd Length: 265  Bit Score: 102.40  E-value: 5.42e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFkaRDKVSGDlVALKMVKM-EPD-DDVSTLQKEILILKTCRHANIVAYHGsYLWLQKLWICMEFCGA 96
Cdd:cd14150   4 MLKRIGTGSFGTVF--RGKWHGD-VAVKILKVtEPTpEQLQAFKNEMQVLRKTRHVNILLFMG-FMTRPNFAIITQWCEG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsaqigATLARRLSFI-- 173
Cdd:cd14150  80 SSLYRHLHVTETrFDTMQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGL-----ATVKTRWSGSqq 154
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6005810  174 -----GTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKE 239
Cdd:cd14150 155 veqpsGSILWMAPEVIRMQDTNPYSFQSDVYAYGVVLYELMSGTLPYSNINNRDQIIFMVGRGYLSPDLSK 225
PK_STRAD_beta cd08226
Pseudokinase domain of STE20-related kinase adapter protein beta; The pseudokinase domain ...
31-276 6.02e-24

Pseudokinase domain of STE20-related kinase adapter protein beta; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity.STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270864 [Multi-domain]  Cd Length: 328  Bit Score: 103.80  E-value: 6.02e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   31 VFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQ--VT 106
Cdd:cd08226  16 VYLARHTPTGTLVTVKITNLDncSEEHLKALQNEVVLSHFFRHPNIMTHWTVFTEGSWLWVISPFMAYGSARGLLKtyFP 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  107 GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLAdfGISAQIG-ATLARRLSFI--------GTPY 177
Cdd:cd08226  96 EGMNEALIGNILYGAIKALNYLHQNGCIHRSVKASHILISGDGLVSLS--GLSHLYSmVTNGQRSKVVydfpqfstSVLP 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  178 WMAPEVAAVALKgGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTK-SGYQP------PRLKEKGK-------- 242
Cdd:cd08226 174 WLSPELLRQDLH-GYNVKSDIYSVGITACELARGQVPFQDMRRTQMLLQKLKgPPYSPldifpfPELESRMKnsqsgmds 252
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6005810  243 ---------------------------WSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd08226 253 gigesvatssmtrtmtserlqtpssktFSPAFHNLVELCLQQDPEKRPSASSLLSHSFFKQ 313
STKc_SnRK2-3 cd14665
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
17-204 6.09e-24

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2, group 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271135 [Multi-domain]  Cd Length: 257  Bit Score: 101.99  E-value: 6.09e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14665   2 YELVKDIGSGNFGVARLMRDKQTKELVAVKYIERGEKID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAAG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND--AGEVRLADFGISAQiGATLARRLSFIG 174
Cdd:cd14665  81 GELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGspAPRLKICDFGYSKS-SVLHSQPKSTVG 159
                       170       180       190
                ....*....|....*....|....*....|.
gi 6005810  175 TPYWMAPEvaaVALKGGYN-ELCDIWSLGIT 204
Cdd:cd14665 160 TPAYIAPE---VLLKKEYDgKIADVWSCGVT 187
STKc_PhKG1 cd14182
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs ...
15-276 6.35e-24

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 1 subunit (PhKG1) is also referred to as the muscle gamma isoform. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271084 [Multi-domain]  Cd Length: 276  Bit Score: 102.30  E-value: 6.35e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ---------KEILIL-KTCRHANIVAYHGSYLWL 84
Cdd:cd14182   3 EKYEPKEILGRGVSSVVRRCIHKPTRQEYAVKIIDITGGGSFSPEEvqelreatlKEIDILrKVSGHPNIIQLKDTYETN 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd14182  83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 tlARRLSFI-GTPYWMAPEVAAVALKG---GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQ--PPRLK 238
Cdd:cd14182 163 --GEKLREVcGTPGYLAPEIIECSMDDnhpGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQfgSPEWD 240
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  239 EKgkwSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14182 241 DR---SDTVKDLISRFLVVQPQKRYTAEEALAHPFFQQ 275
STKc_SPEG_rpt2 cd14111
Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle ...
13-271 7.72e-24

Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271013 [Multi-domain]  Cd Length: 257  Bit Score: 101.82  E-value: 7.72e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQkEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14111   1 PQKPYTFLDEKARGRFGVIRRCRENATGKNFPAKIVPYQAEEKQGVLQ-EYEILKSLHHERIMALHEAYITPRYLVLIAE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAG----SLQDIYQvtgsLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGiSAQIGATLA- 167
Cdd:cd14111  80 FCSGKellhSLIDRFR----YSEDDVVGYLVQILQGLEYLHGRRVLHLDIKPDNIMVTNLNAIKIVDFG-SAQSFNPLSl 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLS-FIGTPYWMAPEVaavaLKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSA 245
Cdd:cd14111 155 RQLGrRTGTLEYMAPEM----VKGEpVGPPADIWSIGVLTYIMLSGRSPFEDQDPQETEAKILVAKFDAFKLYPNVSQSA 230
                       250       260
                ....*....|....*....|....*.
gi 6005810  246 AFhnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14111 231 SL--FLKKVLSSYPWSRPTTKDCFAH 254
STKc_PKC cd05570
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer ...
23-262 7.75e-24

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270722 [Multi-domain]  Cd Length: 318  Bit Score: 103.06  E-value: 7.75e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKT-CRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05570   3 LGKGSFGKVMLAERKKTDELYAIKVLKKEviiEDDDVECTMTEKRVLALaNRHPFLTGLHACFQTEDRLYFVMEYVNGGD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQiGATLARRLS-FIGTPY 177
Cdd:cd05570  83 LMFHIQRARRFTEERARFYAAEICLALQFLHERGIIYRDLKLDNVLLDAEGHIKIADFGMCKE-GIWGGNTTStFCGTPD 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  178 WMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF---LMTKSGYqPPRLKEKGKwsaafhNFIKVT 254
Cdd:cd05570 162 YIAPEILREQD---YGFSVDWWALGVLLYEMLAGQSP-FEGDDEDELFeaiLNDEVLY-PRWLSREAV------SILKGL 230

                ....*...
gi 6005810  255 LTKSPKKR 262
Cdd:cd05570 231 LTKDPARR 238
STKc_p38 cd07851
Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs ...
15-261 9.86e-24

Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143356 [Multi-domain]  Cd Length: 343  Bit Score: 103.53  E-value: 9.86e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVkMEPDDDVSTLQ---KEILILKTCRHANIV----AYH--GSYLWLQ 85
Cdd:cd07851  15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKL-SRPFQSAIHAKrtyRELRLLKHMKHENVIglldVFTpaSSLEDFQ 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAgslqDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqig 163
Cdd:cd07851  94 DVYLVTHLMGA----DLNNIVKCqkLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNLAVNEDCELKILDFG------ 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 atLARRLS-----FIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQpPLF--DVHPLRVLFLMTKSGYQPPR 236
Cdd:cd07851 164 --LARHTDdemtgYVATRWYRAPEI--MLNWMHYNQTVDIWSVGCIMAELLTGK-TLFpgSDHIDQLKRIMNLVGTPDEE 238
                       250       260
                ....*....|....*....|....*
gi 6005810  237 LKEKGKWSAAfHNFIKvTLTKSPKK 261
Cdd:cd07851 239 LLKKISSESA-RNYIQ-SLPQMPKK 261
STKc_16 cd13986
Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the ...
16-271 1.10e-23

Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK16 is associated with many names including Myristylated and Palmitylated Serine/threonine Kinase 1 (MPSK1), Kinase related to cerevisiae and thaliana (Krct), and Protein Kinase expressed in day 12 fetal liver (PKL12). It is widely expressed in mammals with highest levels found in liver, testis, and kidney. It is localized in the Golgi but is translocated to the nucleus upon disorganization of the Golgi. STK16 is constitutively active and is capable of phosphorylating itself and other substrates. It may be involved in regulating stromal-epithelial interactions during mammary gland ductal morphogenesis. It may also function as a transcriptional co-activator of type-C natriuretic peptide and VEGF. The STK16 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270888 [Multi-domain]  Cd Length: 282  Bit Score: 101.99  E-value: 1.10e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANI---VAYHGSYL--WLQKLWIC 90
Cdd:cd13986   1 RYRIQRLLGEGGFSFVYLVEDLSTGRLYALKKILCHSKEDVKEAMREIENYRLFNHPNIlrlLDSQIVKEagGKKEVYLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQ---VTGS-LSELQISYVCREVLQGLAYLHSQKKI---HRDIKGANILINDAGEVRLADFG--ISAQ 161
Cdd:cd13986  81 LPYYKRGSLQDEIErrlVKGTfFPEDRILHIFLGICRGLKAMHEPELVpyaHRDIKPGNVLLSEDDEPILMDLGsmNPAR 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 I---GATLARRL----SFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLR--VLFLMTKSG- 231
Cdd:cd13986 161 IeieGRREALALqdwaAEHCTMPYRAPELFDVKSHCTIDEKTDIWSLGCTLYALMYGESP-FERIFQKgdSLALAVLSGn 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6005810  232 YQPPRlkeKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd13986 240 YSFPD---NSRYSEELHQLVKSMLVVNPAERPSIDDLLSR 276
PTKc_FGFR cd05053
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs ...
13-233 1.12e-23

Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. The FGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 270646 [Multi-domain]  Cd Length: 294  Bit Score: 102.11  E-value: 1.12e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKA--------RDKVSgdLVALKMVKMEP-DDDVSTLQKEILILKTC-RHANIVAYHGSYL 82
Cdd:cd05053  10 PRDRLTLGKPLGEGAFGQVVKAeavgldnkPNEVV--TVAVKMLKDDAtEKDLSDLVSEMEMMKMIgKHKNIINLLGACT 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGAGSLQDIYQ----------------VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN 146
Cdd:cd05053  88 QDGPLYVVVEYASKGNLREFLRarrppgeeaspddprvPEEQLTQKDLVSFAYQVARGMEYLASKKCIHRDLAARNVLVT 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  147 DAGEVRLADFGISAQIG------ATLARRLsfigtPY-WMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPLFDV 218
Cdd:cd05053 168 EDNVMKIADFGLARDIHhidyyrKTTNGRL-----PVkWMAPE----ALFDRvYTHQSDVWSFGVLLWEIFTLGGSPYPG 238
                       250
                ....*....|....*
gi 6005810  219 HPLRVLFLMTKSGYQ 233
Cdd:cd05053 239 IPVEELFKLLKEGHR 253
STKc_PhKG2 cd14181
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs ...
17-271 1.17e-23

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 2 subunit (PhKG2) is also referred to as the testis/liver gamma isoform. Mutations in its gene cause autosomal-recessive glycogenosis of the liver. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271083 [Multi-domain]  Cd Length: 279  Bit Score: 101.59  E-value: 1.17e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD-------DDV-STLQKEILILKTCR-HANIVAYHGSYLWLQKL 87
Cdd:cd14181  12 YDPKEVIGRGVSSVVRRCVHRHTGQEFAVKIIEVTAErlspeqlEEVrSSTLKEIHILRQVSgHPSIITLIDSYESSTFI 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLA 167
Cdd:cd14181  92 FLVFDLMRRGELFDYLTEKVTLSEKETRSIMRSLLEAVSYLHANNIVHRDLKPENILLDDQLHIKLSDFGFSCHLEPGEK 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRlSFIGTPYWMAPEVAAVALKG---GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQ--PPRLKEKgk 242
Cdd:cd14181 172 LR-ELCGTPGYLAPEILKCSMDEthpGYGKEVDLWACGVILFTLLAGSPPFWHRRQMLMLRMIMEGRYQfsSPEWDDR-- 248
                       250       260
                ....*....|....*....|....*....
gi 6005810  243 wSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14181 249 -SSTVKDLISRLLVVDPEIRLTAEQALQH 276
STKc_cPKC cd05587
Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; ...
20-262 1.26e-23

Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. cPKCs are potent kinases for histones, myelin basic protein, and protamine. They depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270739 [Multi-domain]  Cd Length: 320  Bit Score: 102.47  E-value: 1.26e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV--STLQKEILILKTcRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd05587   1 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDviiQDDDVecTMVEKRVLALSG-KPPFLTQLHSCFQTMDRLYFVMEYV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ--IGATLARrlSF 172
Cdd:cd05587  80 NGGDLMYHIQQVGKFKEPVAVFYAAEIAVGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEgiFGGKTTR--TF 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF--LMTKSGYQPPRLKEKGKwsaafhNF 250
Cdd:cd05587 158 CGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPP-FDGEDEDELFqsIMEHNVSYPKSLSKEAV------SI 227
                       250
                ....*....|..
gi 6005810  251 IKVTLTKSPKKR 262
Cdd:cd05587 228 CKGLLTKHPAKR 239
STKc_CRIK cd05601
Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze ...
23-214 1.37e-23

Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CRIK (also called citron kinase) is an effector of the small GTPase Rho. It plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. CRIK contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270752 [Multi-domain]  Cd Length: 328  Bit Score: 102.77  E-value: 1.37e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAG-- 97
Cdd:cd05601   9 IGRGHFGEVQVVKEKATGDIYAMKVLKkseTLAQEEVSFFEEERDIMAKANSPWITKLQYAFQDSENLYLVMEYHPGGdl 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 -SLQDIYQvtGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT-LARRLSFIGT 175
Cdd:cd05601  89 lSLLSRYD--DIFEESMARFYLAELVLAIHSLHSMGYVHRDIKPENILIDRTGHIKLADFGSAAKLSSDkTVTSKMPVGT 166
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  176 PYWMAPEVAAV---ALKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd05601 167 PDYIAPEVLTSmngGSKGTYGVECDWWSLGIVAYEMLYGKTP 208
STKc_PSKH1 cd14087
Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the ...
17-274 1.46e-23

Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PSKH1 is an autophosphorylating STK that is expressed ubiquitously and exhibits multiple intracellular localizations including the centrosome, Golgi apparatus, and splice factor compartments. It contains a catalytic kinase domain and an N-terminal SH4-like motif that is acylated to facilitate membrane attachment. PSKH1 plays a rile in the maintenance of the Golgi apparatus, an important organelle within the secretory pathway. It may also function as a novel splice factor and a regulator of prostate cancer cell growth. The PSKH1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270989 [Multi-domain]  Cd Length: 259  Bit Score: 101.07  E-value: 1.46e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14087   3 YDIKALIGRGSFSRVVRVEHRVTRQPYAIKMIETKCRGR-EVCESELNVLRRVRHTNIIQLIEVFETKERVYMVMELATG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG---EVRLADFGISAQIGATLARRLSFI 173
Cdd:cd14087  82 GELFDRIIAKGSFTERDATRVLQMVLDGVKYLHGLGITHRDLKPENLLYYHPGpdsKIMITDFGLASTRKKGPNCLMKTT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 -GTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGY----QP-PRLKEKGKwsaaf 247
Cdd:cd14087 162 cGTPEYIAPE---ILLRKPYTQSVDMWAVGVIAYILLSGTMPFDDDNRTRLYRQILRAKYsysgEPwPSVSNLAK----- 233
                       250       260
                ....*....|....*....|....*..
gi 6005810  248 hNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14087 234 -DFIDRLLTVNPGERLSATQALKHPWI 259
STKc_LIMK cd14154
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer ...
23-208 1.57e-23

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. Vertebrate have two members, LIMK1 and LIMK2. The LIMK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271056 [Multi-domain]  Cd Length: 272  Bit Score: 101.05  E-value: 1.57e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14154   1 LGKGFFGQAIKVTHRETGEVMVMKELIRFDEEAQRNFLKEVKVMRSLDHPNVLKFIGVLYKDKKLNLITEYIPGGTLKDV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-------AQIGATLA------- 167
Cdd:cd14154  81 LKDMARpLPWAQRVRFAKDIASGMAYLHSMNIIHRDLNSHNCLVREDKTVVVADFGLArliveerLPSGNMSPsetlrhl 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  168 ------RRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIEL 208
Cdd:cd14154 161 kspdrkKRYTVVGNPYWMAPEM----LNGrSYDEKVDIFSFGIVLCEI 204
PTZ00263 PTZ00263
protein kinase A catalytic subunit; Provisional
17-262 1.62e-23

protein kinase A catalytic subunit; Provisional


Pssm-ID: 140289 [Multi-domain]  Cd Length: 329  Bit Score: 102.59  E-value: 1.62e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    17 YDLLQRLGGGTYGEVFKARDKVSGDLVALK------MVKMEPDDDVStlqKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:PTZ00263  20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKclkkreILKMKQVQHVA---QEKSILMELSHPFIVNMMCSFQDENRVYFL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgatLARRL 170
Cdd:PTZ00263  97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV---PDRTF 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlkekgkW-SAAFHN 249
Cdd:PTZ00263 174 TLCGTPEYLAPEVIQ---SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN------WfDGRARD 244
                        250
                 ....*....|...
gi 6005810   250 FIKVTLTKSPKKR 262
Cdd:PTZ00263 245 LVKGLLQTDHTKR 257
STKc_PKB_beta cd05595
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); ...
23-275 1.67e-23

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain.The PKB-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173686 [Multi-domain]  Cd Length: 323  Bit Score: 102.39  E-value: 1.67e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL 99
Cdd:cd05595   3 LGKGTFGKVILVREKATGRYYAMKILRKEviiAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWM 179
Cdd:cd05595  83 FFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYL 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlkekgKWSAAFHNFIKVTLTKSP 259
Cdd:cd05595 163 APEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR-----TLSPEAKSLLAGLLKKDP 234
                       250       260
                ....*....|....*....|.
gi 6005810  260 KKR----PS-ATKMLSHQLVS 275
Cdd:cd05595 235 KQRlgggPSdAKEVMEHRFFL 255
STKc_LKB1 cd14119
Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer ...
23-271 2.59e-23

Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LKB1, also called STK11, was first identified as a tumor suppressor responsible for Peutz-Jeghers syndrome, a disorder that leads to an increased risk of spontaneous epithelial cancer. It serves as a master upstream kinase that activates AMP-activated protein kinase (AMPK) and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. To be activated, LKB1 requires the adaptor proteins STe20-Related ADaptor (STRAD) and mouse protein 25 (MO25). The LKB1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271021 [Multi-domain]  Cd Length: 255  Bit Score: 100.02  E-value: 2.59e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK-------MEPDDDVstlQKEILILKTCRHANIVAYHgSYLWL---QKLWICME 92
Cdd:cd14119   1 LGEGSYGKVKEVLDTETLCRRAVKILKkrklrriPNGEANV---KREIQILRRLNHRNVIKLV-DVLYNeekQKLYMVME 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGaGSLQDI--YQVTGSLSELQI-SYVCrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG--ATLA 167
Cdd:cd14119  77 YCV-GGLQEMldSAPDKRLPIWQAhGYFV-QLIDGLEYLHSQGIIHKDIKPGNLLLTTDGTLKISDFGVAEALDlfAEDD 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAvalkG-----GYneLCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKgk 242
Cdd:cd14119 155 TCTTSQGSPAFQPPEIAN----GqdsfsGF--KVDIWSAGVTLYNMTTGKYPFEGDNIYKLFENIGKGEYTIPDDVDP-- 226
                       250       260
                ....*....|....*....|....*....
gi 6005810  243 wsaAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14119 227 ---DLQDLLRGMLEKDPEKRFTIEQIRQH 252
STKc_CaMKK1 cd14200
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; ...
16-275 2.74e-23

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK1, also called CaMKK alpha, is involved in the regulation of glucose uptake in skeletal muscles, independently of AMPK and PKB activation. It also play roles in learning and memory. Studies on CaMKK1 knockout mice reveal deficits in fear conditioning. The CaMKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271102 [Multi-domain]  Cd Length: 284  Bit Score: 100.79  E-value: 2.74e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM-----------------------EPDDDVSTLQK---EILILKTC 69
Cdd:cd14200   1 QYKLQSEIGKGSYGVVKLAYNESDDKYYAMKVLSKkkllkqygfprrppprgskaaqgEQAKPLAPLERvyqEIAILKKL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   70 RHANIVAyhgsylwL---------QKLWICMEFCGAGSLQDIyQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKG 140
Cdd:cd14200  81 DHVNIVK-------LievlddpaeDNLYMVFDLLRKGPVMEV-PSDKPFSEDQARLYFRDIVLGIEYLHYQKIVHRDIKP 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  141 ANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHp 220
Cdd:cd14200 153 SNLLLGDDGHVKIADFGVSNQFEGNDALLSSTAGTPAFMAPETLSDSGQSFSGKALDVWAMGVTLYCFVYGKCPFIDEF- 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  221 lrVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14200 232 --ILALHNKIKNKPVEFPEEPEISEELKDLILKMLDKNPETRITVPEIKVHPWVT 284
STKc_Raf cd14062
Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) ...
23-238 2.78e-23

Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Raf kinases act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. Aberrant expression or activation of components in this pathway are associated with tumor initiation, progression, and metastasis. Raf proteins contain a Ras binding domain, a zinc finger cysteine-rich domain, and a catalytic kinase domain. Vertebrates have three Raf isoforms (A-, B-, and C-Raf) with different expression profiles, modes of regulation, and abilities to function in the ERK cascade, depending on cellular context and stimuli. They have essential and non-overlapping roles during embryo- and organogenesis. Knockout of each isoform results in a lethal phenotype or abnormality in most mouse strains. The Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270964 [Multi-domain]  Cd Length: 253  Bit Score: 99.78  E-value: 2.78e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARdkVSGDlVALKMVKMEpDDDVSTLQ---KEILILKTCRHANIVAYHGsYLWLQKLWICMEFCGAGSL 99
Cdd:cd14062   1 IGSGSFGTVYKGR--WHGD-VAVKKLNVT-DPTPSQLQafkNEVAVLRKTRHVNILLFMG-YMTKPQLAIVTQWCEGSSL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsaqigATLARRLS------- 171
Cdd:cd14062  76 YKHLHVLETKFEMlQLIDIARQTAQGMDYLHAKNIIHRDLKSNNIFLHEDLTVKIGDFGL-----ATVKTRWSgsqqfeq 150
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  172 FIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLK 238
Cdd:cd14062 151 PTGSILWMAPEVIRMQDENPYSFQSDVYAFGIVLYELLTGQLPYSHINNRDQILFMVGRGYLRPDLS 217
STKc_CDK4 cd07863
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs ...
17-271 2.99e-23

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of TGF-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143368 [Multi-domain]  Cd Length: 288  Bit Score: 100.81  E-value: 2.99e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD---VSTLqKEILILKTCR---HANIVayhgsylwlqKLwic 90
Cdd:cd07863   2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDglpLSTV-REVALLKRLEafdHPNIV----------RL--- 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVT-------------------GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV 151
Cdd:cd07863  68 MDVCATSRTDRETKVTlvfehvdqdlrtyldkvppPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQV 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  152 RLADFGIsAQIGATLARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQP------------PLFDV- 218
Cdd:cd07863 148 KLADFGL-ARIYSCQMALTPVVVTLWYRAPE---VLLQSTYATPVDMWSVGCIFAEMFRRKPlfcgnseadqlgKIFDLi 223
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  219 -------HPLRVlfLMTKSGYQP----------PRLKEKGKwsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07863 224 glppeddWPRDV--TLPRGAFSPrgprpvqsvvPEIEESGA------QLLLEMLTFNPHKRISAFRALQH 285
STKc_GSK3 cd14137
The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze ...
16-272 3.25e-23

The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GSK3 is a mutifunctional kinase involved in many cellular processes including cell division, proliferation, differentiation, adhesion, and apoptosis. In plants, GSK3 plays a role in the response to osmotic stress. In Caenorhabditis elegans, it plays a role in regulating normal oocyte-to-embryo transition and response to oxidative stress. In Chlamydomonas reinhardtii, GSK3 regulates flagellar length and assembly. In mammals, there are two isoforms, GSK3alpha and GSK3beta, which show both distinct and redundant functions. The two isoforms differ mainly in their N-termini. They are both involved in axon formation and in Wnt signaling.They play distinct roles in cardiogenesis, with GSKalpha being essential in cardiomyocyte survival, and GSKbeta regulating heart positioning and left-right symmetry. GSK3beta was first identified as a regulator of glycogen synthesis, but has since been determined to play other roles. It regulates the degradation of beta-catenin and IkB. Beta-catenin is the main effector of Wnt, which is involved in normal haematopoiesis and stem cell function. IkB is a central inhibitor of NF-kB, which is critical in maintaining leukemic cell growth. GSK3beta is enriched in the brain and is involved in regulating neuronal signaling pathways. It is implicated in the pathogenesis of many diseases including Type II diabetes, obesity, mood disorders, Alzheimer's disease, osteoporosis, and some types of cancer, among others. The GSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271039 [Multi-domain]  Cd Length: 293  Bit Score: 100.65  E-value: 3.25e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPdddvSTLQKEILILKTCRHANIVAYHGSYLWLQK------LWI 89
Cdd:cd14137   5 SYTIEKVIGSGSFGVVYQAKLLETGEVVAIKKVLQDK----RYKNRELQIMRRLKHPNIVKLKYFFYSSGEkkdevyLNL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGagslQDIYQVTGSLSELQ----------ISYvcrEVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADFGi 158
Cdd:cd14137  81 VMEYMP----ETLYRVIRHYSKNKqtipiiyvklYSY---QLFRGLAYLHSLGICHRDIKPQNLLVDpETGVLKLCDFG- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 SAQigatlarRL-------SFIGTPYWMAPEVAAVALKggYNELCDIWSLG-ItaieLAEL--QPPLF------D--VHP 220
Cdd:cd14137 153 SAK-------RLvpgepnvSYICSRYYRAPELIFGATD--YTTAIDIWSAGcV----LAELllGQPLFpgessvDqlVEI 219
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  221 LRVL-------FLMTKSGYQPPRL-KEKGK-WSAAFHN--------FIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14137 220 IKVLgtptreqIKAMNPNYTEFKFpQIKPHpWEKVFPKrtppdaidLLSKILVYNPSKRLTALEALAHP 288
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
17-262 4.08e-23

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 101.23  E-value: 4.08e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV--STLQKEILILkTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05616   2 FNFLMVLGKGSFGKVMLAERKGTDELYAVKILKKDvviQDDDVecTMVEKRVLAL-SGKPPFLTQLHSCFQTMDRLYFVM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd05616  81 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF--LMTKSGYQPprlKEKGKWSAAfhn 249
Cdd:cd05616 161 FCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAP-FEGEDEDELFqsIMEHNVAYP---KSMSKEAVA--- 230
                       250
                ....*....|...
gi 6005810  250 FIKVTLTKSPKKR 262
Cdd:cd05616 231 ICKGLMTKHPGKR 243
STKc_PKD cd14082
Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer ...
23-203 4.67e-23

Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKDs are important regulators of many intracellular signaling pathways such as ERK and JNK, and cellular processes including the organization of the trans-Golgi network, membrane trafficking, cell proliferation, migration, and apoptosis. They contain N-terminal cysteine-rich zinc binding C1 (PKC conserved region 1), central PH (Pleckstrin Homology), and C-terminal catalytic kinase domains. Mammals harbor three types of PKDs: PKD1 (or PKCmu), PKD2, and PKD3 (or PKCnu). PKDs are activated in a PKC-dependent manner by many agents including diacylglycerol (DAG), PDGF, neuropeptides, oxidative stress, and tumor-promoting phorbol esters, among others. The PKD subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270984 [Multi-domain]  Cd Length: 260  Bit Score: 99.41  E-value: 4.67e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14082  11 LGSGQFGIVYGGKHRKTGRDVAIKVIDKLrfPTKQESQLRNEVAILQQLSHPGVVNLECMFETPERVFVVMEKLHGDMLE 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG---EVRLADFGISAQIGATLARRlSFIGTP 176
Cdd:cd14082  91 MILsSEKGRLPERITKFLVTQILVALRYLHSKNIVHCDLKPENVLLASAEpfpQVKLCDFGFARIIGEKSFRR-SVVGTP 169
                       170       180
                ....*....|....*....|....*..
gi 6005810  177 YWMAPEvaaVALKGGYNELCDIWSLGI 203
Cdd:cd14082 170 AYLAPE---VLRNKGYNRSLDMWSVGV 193
STKc_DAPK2 cd14196
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs ...
15-271 4.73e-23

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK2, also called DAPK-related protein 1 (DRP-1), is a Ca2+/calmodulin (CaM)-regulated protein containing an N-terminal kinase domain, a CaM autoinhibitory site and a dimerization module. It lacks the cytoskeletal binding regions of DAPK1 and the exogenous protein has been shown to be soluble and cytoplasmic. FLAG-tagged DAPK2, however, accumulated within membrane-enclosed autophagic vesicles. It is unclear where endogenous DAPK2 is localized. DAPK2 participates in TNF-alpha and FAS-receptor induced cell death and enhances neutrophilic maturation in myeloid leukemic cells. It contributes to the induction of anoikis and its down-regulation is implicated in the beta-catenin induced resistance of malignant epithelial cells to anoikis. The DAPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271098 [Multi-domain]  Cd Length: 269  Bit Score: 99.65  E-value: 4.73e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDV------STLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd14196   5 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASrrgvsrEEIEREVSILRQVLHPNIITLHDVYENRTDVV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISAQIGA 164
Cdd:cd14196  85 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNipipHIKLIDFGLAHEIED 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRlSFIGTPYWMAPEVAavalkgGYNEL---CDIWSLG-ITAIELAELQPPLFDVHPlRVLFLMTKSGYQpprLKEK 240
Cdd:cd14196 165 GVEFK-NIFGTPEFVAPEIV------NYEPLgleADMWSIGvITYILLSGASPFLGDTKQ-ETLANITAVSYD---FDEE 233
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  241 --GKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14196 234 ffSHTSELAKDFIRKLLVKETRKRLTIQEALRH 266
STKc_DAPK3 cd14195
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs ...
11-274 5.20e-23

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK3, also called DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk), contains an N-terminal kinase domain and a C-terminal region with nuclear localization signals (NLS) and a leucine zipper motif that mediates homodimerization and interaction with other leucine zipper proteins. It interacts with Par-4, a protein that contains a death domain and interacts with actin filaments. DAPK3 is present in both the cytoplasm and nucleus. Its co-expression with Par-4 results in the co-localization of the two proteins to actin filaments. In addition to cell death, DAPK3 is also implicated in mediating cell motility and the contraction of smooth muscles. The DAPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271097 [Multi-domain]  Cd Length: 271  Bit Score: 99.69  E-value: 5.20e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME----PDDDVS--TLQKEILILKTCRHANIVAYHGSYLWL 84
Cdd:cd14195   1 SMVEDHYEMGEELGSGQFAIVRKCREKGTGKEYAAKFIKKRrlssSRRGVSreEIEREVNILREIQHPNIITLHDIFENK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISA 160
Cdd:cd14195  81 TDVVLILELVSGGELFDFLAEKESLTEEEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNvpnpRIKLIDFGIAH 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 QIGATLARRLSFiGTPYWMAPEVAavalkgGYNEL---CDIWSLG-ITAIELAELQPPLFDVHPlRVLFLMTKSGYQppr 236
Cdd:cd14195 161 KIEAGNEFKNIF-GTPEFVAPEIV------NYEPLgleADMWSIGvITYILLSGASPFLGETKQ-ETLTNISAVNYD--- 229
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6005810  237 LKEK--GKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14195 230 FDEEyfSNTSELAKDFIRRLLVKDPKKRMTIAQSLEHSWI 269
STKc_Twitchin_like cd14114
The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs ...
15-271 5.40e-23

The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Caenorhabditis elegans and Aplysia californica Twitchin, Drosophila melanogaster Projectin, and similar proteins. These are very large muscle proteins containing multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains and a single kinase domain near the C-terminus. Twitchin and Projectin are both associated with thick filaments. Twitchin is localized in the outer parts of A-bands and is involved in regulating muscle contraction. It interacts with the myofibrillar proteins myosin and actin in a phosphorylation-dependent manner, and may be involved in regulating the myosin cross-bridge cycle. The kinase activity of Twitchen is activated by Ca2+ and the Ca2+ binding protein S100A1. Projectin is associated with the end of thick filaments and is a component of flight muscle connecting filaments. The kinase domain of Projectin may play roles in autophosphorylation and transphosphorylation, which impact the formation of myosin filaments. The Twitchin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271016 [Multi-domain]  Cd Length: 259  Bit Score: 99.20  E-value: 5.40e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14114   2 DHYDILEELGTGAFGVVHRCTERATGNNFAAKFIMTPHESDKETVRKEIQIMNQLHHPKLINLHDAFEDDNEMVLILEFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTG-SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN--DAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd14114  82 SGGELFERIAAEHyKMSEAEVINYMRQVCEGLCHMHENNIVHLDIKPENIMCTtkRSNEVKLIDFGLATHLDPKESVKVT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 fIGTPYWMAPEVAAVALKGGYNelcDIWSLGITA-IELAELQPplF----DVHPLRVL----FLMTKSGYQppRLKEKGK 242
Cdd:cd14114 162 -TGTAEFAAPEIVEREPVGFYT---DMWAVGVLSyVLLSGLSP--FagenDDETLRNVkscdWNFDDSAFS--GISEEAK 233
                       250       260
                ....*....|....*....|....*....
gi 6005810  243 wsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14114 234 ------DFIRKLLLADPNKRMTIHQALEH 256
STKc_Pat1_like cd13993
Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of ...
17-208 6.69e-23

Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Pat1 (also called Ran1), Saccharomyces cerevisiae VHS1 and KSP1, and similar fungal STKs. Pat1 blocks Mei2, an RNA-binding protein which is indispensable in the initiation of meiosis. Pat1 is inactivated and Mei2 activated, which initiates meiosis, under nutrient-deprived conditions through a signaling cascade involving Ste11. Meiosis induced by Pat1 inactivation may show different characteristics than normal meiosis including aberrant positioning of centromeres. VHS1 was identified in a screen for suppressors of cell cycle arrest at the G1/S transition, while KSP1 may be involved in regulating PRP20, which is required for mRNA export and maintenance of nuclear structure. The Pat1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270895 [Multi-domain]  Cd Length: 267  Bit Score: 99.35  E-value: 6.69e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-------KMEPDDDVSTLQKEI-LILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd13993   2 YQLISPIGEGAYGVVYLAVDLRTGRKYAIKCLyksgpnsKDGNDFQKLPQLREIdLHRRVSRHPNIITLHDVFETEVAIY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSL------QDIYQVTGSLselqISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE-VRLADFGISaq 161
Cdd:cd13993  82 IVLEYCPNGDLfeaiteNRIYVGKTEL----IKNVFLQLIDAVKHCHSLGIYHRDIKPENILLSQDEGtVKLCDFGLA-- 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  162 igATLARRLSF-IGTPYWMAPEV---AAVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd13993 156 --TTEKISMDFgVGSEFYMAPECfdeVGRSLKGYPCAAGDIWSLGIILLNL 204
STKc_SGK3 cd05604
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
20-221 6.91e-23

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK3 (also called cytokine-independent survival kinase or CISK) is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. The SGK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270755 [Multi-domain]  Cd Length: 326  Bit Score: 100.42  E-value: 6.91e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05604   1 LKVIGKGSFGKVLLAKRKRDGKYYAVKVLQkkviLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTDKLYFVLDFVN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGT 175
Cdd:cd05604  81 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHIVLTDFGLCKEGISNSDTTTTFCGT 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  176 PYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLF--DVHPL 221
Cdd:cd05604 161 PEYLAPE---VIRKQPYDNTVDWWCLGSVLYEMLYGLPPFYcrDTAEM 205
STKc_nPKC_theta_like cd05592
Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and ...
23-262 7.60e-23

Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. The nPKC-theta-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270744 [Multi-domain]  Cd Length: 320  Bit Score: 100.15  E-value: 7.60e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV-STL-QKEILILkTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd05592   3 LGKGSFGKVMLAELKGTNQYFAIKALKKDvvlEDDDVeCTMiERRVLAL-ASQHPFLTHLFCTFQTESHLFFVMEYLNGG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ--IGATLARrlSFIGT 175
Cdd:cd05592  82 DLMFHIQQSGRFDEDRARFYGAEIICGLQFLHSRGIIYRDLKLDNVLLDREGHIKIADFGMCKEniYGENKAS--TFCGT 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  176 PYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF--LMTKSGYQPprlkekgKW-SAAFHNFI 251
Cdd:cd05592 160 PDYIAPEI----LKGqKYNQSVDWWSFGVLLYEMLIGQSP-FHGEDEDELFwsICNDTPHYP-------RWlTKEAASCL 227
                       250
                ....*....|.
gi 6005810  252 KVTLTKSPKKR 262
Cdd:cd05592 228 SLLLERNPEKR 238
STKc_EIF2AK3_PERK cd14048
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
17-272 7.93e-23

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 3 or PKR-like Endoplasmic Reticulum Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PERK (or EIF2AK3) is a type-I ER transmembrane protein containing a luminal domain bound with the chaperone BiP under unstressed conditions and a cytoplasmic catalytic kinase domain. In response to the accumulation of misfolded or unfolded proteins in the ER, PERK is activated through the release of BiP, allowing it to dimerize and autophosphorylate. It functions as the central regulator of translational control during the Unfolded Protein Response (UPR) pathway. In addition to the eIF-2 alpha subunit, PERK also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PERK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270950 [Multi-domain]  Cd Length: 281  Bit Score: 99.18  E-value: 7.93e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMePDDDVS--TLQKEILILKTCRHANIVAYHGSYL------WLQK-- 86
Cdd:cd14048   8 FEPIQCLGRGGFGVVFEAKNKVDDCNYAVKRIRL-PNNELAreKVLREVRALAKLDHPGIVRYFNAWLerppegWQEKmd 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 ---LWICMEFCGAGSLQDIYQVTGSLSELQISY---VCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA 160
Cdd:cd14048  87 evyLYIQMQLCRKENLKDWMNRRCTMESRELFVclnIFKQIASAVEYLHSKGLIHRDLKPSNVFFSLDDVVKVGDFGLVT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 QIGA------------TLARRLSFIGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELaeLQPplFDVHPLRVLFLM 227
Cdd:cd14048 167 AMDQgepeqtvltpmpAYAKHTGQVGTRLYMSPE----QIHGNqYSEKVDIFALGLILFEL--IYS--FSTQMERIRTLT 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  228 -TKSGYQPPRLKEKGKWSaafHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14048 239 dVRKLKFPALFTNKYPEE---RDMVQQMLSPSPSERPEAHEVIEHA 281
STKc_PKA cd14209
Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze ...
15-257 8.66e-23

Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271111 [Multi-domain]  Cd Length: 290  Bit Score: 99.40  E-value: 8.66e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKM------VKMEpddDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd14209   1 DDFDRIKTLGTGSFGRVMLVRHKETGNYYAMKIldkqkvVKLK---QVEHTLNEKRILQAINFPFLVKLEYSFKDNSNLY 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGatlAR 168
Cdd:cd14209  78 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLAFEYLHSLDLIYRDLKPENLLIDQQGYIKVTDFGFAKRVK---GR 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlKEKGKWSAAFH 248
Cdd:cd14209 155 TWTLCGTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-HFSSDLKDLLR 230

                ....*....
gi 6005810  249 NFIKVTLTK 257
Cdd:cd14209 231 NLLQVDLTK 239
STKc_NAK_like cd14037
Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze ...
26-264 9.35e-23

Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Drosophila melanogaster NAK, human BMP-2-inducible protein kinase (BMP2K or BIKe) and similar vertebrate proteins, as well as the Saccharomyces cerevisiae proteins Prk1, Actin-regulating kinase 1 (Ark1), and Akl1. NAK was the first characterized member of this subfamily. It plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. BMP2K contains a nuclear localization signal and a kinase domain that is capable of phosphorylating itself and myelin basic protein. The expression of the BMP2K gene is increase during BMP-2-induced osteoblast differentiation. It may function to control the rate of differentiation. Prk1, Ark1, and Akl1 comprise a subfamily of yeast proteins that are important regulators of the actin cytoskeleton and endocytosis. They share an N-terminal kinase domain but no significant homology in other regions of their sequences. The NAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270939 [Multi-domain]  Cd Length: 277  Bit Score: 98.89  E-value: 9.35e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCR-HANIVAYHGSY-------LWlqKLWICMEFCGAG 97
Cdd:cd14037  14 GGFAHVYLVKTSNGGNRAALKRVYVNDEHDLNVCKREIEIMKRLSgHKNIVGYIDSSanrsgngVY--EVLLLMEYCKGG 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQ--VTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDAGEVRLADFGiSAQIGATLARRLSFI 173
Cdd:cd14037  92 GVIDLMNqrLQTGLTESEILKIFCDVCEAVAAMHYLKPplIHRDLKVENVLISDSGNYKLCDFG-SATTKILPPQTKQGV 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 G----------TPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLflmtKSGYQPPrlkEKGKW 243
Cdd:cd14037 171 TyveedikkytTLQYRAPEMIDLYRGKPITEKSDIWALGCLLYKLCFYTTPFEESGQLAIL----NGNFTFP---DNSRY 243
                       250       260
                ....*....|....*....|.
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd14037 244 SKRLHKLIRYMLEEDPEKRPN 264
STKc_SBK1 cd13987
Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the ...
23-203 9.36e-23

Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SBK1, also called BSK146, is predominantly expressed in the brain. Its expression is increased in the developing brain during the late embryonic stage, coinciding with dramatic neuronal proliferation, migration, and maturation. SBK1 may play an important role in regulating brain development. The SBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270889 [Multi-domain]  Cd Length: 259  Bit Score: 98.55  E-value: 9.36e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEpdddvSTLQKEIL-----ILKTCRHANIVAYHG-------SYLWLQklwic 90
Cdd:cd13987   1 LGEGTYGKVLLAVHKGSGTKMALKFVPKP-----STKLKDFLreyniSLELSVHPHIIKTYDvafetedYYVFAQ----- 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 mEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLADFGISAQIGaTLAR 168
Cdd:cd13987  71 -EYAPYGDLFSIIPPQVGLPEERVKRCAAQLASALDFMHSKNLVHRDIKPENVLLfdKDCRRVKLCDFGLTRRVG-STVK 148
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 6005810  169 RLSFIgTPYwMAPEVAAVALKGGY--NELCDIWSLGI 203
Cdd:cd13987 149 RVSGT-IPY-TAPEVCEAKKNEGFvvDPSIDVWAFGV 183
STKc_cPKC_alpha cd05615
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs ...
17-262 9.63e-23

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. The cPKC-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270766 [Multi-domain]  Cd Length: 341  Bit Score: 100.46  E-value: 9.63e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV--STLQKEILILKTcRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05615  12 FNFLMVLGKGSFGKVMLAERKGSDELYAIKILKKDvviQDDDVecTMVEKRVLALQD-KPPFLTQLHSCFQTVDRLYFVM 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS 171
Cdd:cd05615  91 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHKKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVEGVTTRT 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVAAVAlkgGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLF--LMTKSGYQPPRLKEKGKwsaafhN 249
Cdd:cd05615 171 FCGTPDYIAPEIIAYQ---PYGRSVDWWAYGVLLYEMLAGQPP-FDGEDEDELFqsIMEHNVSYPKSLSKEAV------S 240
                       250
                ....*....|...
gi 6005810  250 FIKVTLTKSPKKR 262
Cdd:cd05615 241 ICKGLMTKHPAKR 253
PKc_DYRK cd14210
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
15-216 1.01e-22

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase; Protein Kinases (PKs), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK) subfamily, catalytic (c) domain. Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. The DYRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein S/T PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. Vertebrates contain multiple DYRKs (DYRK1-4) and mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A is involved in neuronal differentiation and is implicated in the pathogenesis of DS (Down syndrome). DYRK1B plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRK2 promotes apoptosis in response to DNA damage by phosphorylating the tumor suppressor p53, while DYRK3 promotes cell survival by phosphorylating SIRT1 and promoting p53 deacetylation. DYRK4 is a testis-specific kinase that may function during spermiogenesis.


Pssm-ID: 271112 [Multi-domain]  Cd Length: 311  Bit Score: 99.54  E-value: 1.01e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DH----YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmepDDDVSTLQK--EILILKTCRHA------NIVAYHGSYL 82
Cdd:cd14210   9 DHiayrYEVLSVLGKGSFGQVVKCLDHKTGQLVAIKIIR---NKKRFHQQAlvEVKILKHLNDNdpddkhNIVRYKDSFI 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKLWICMEFCGagslQDIYQVTGS-----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLAD 155
Cdd:cd14210  86 FRGHLCIVFELLS----INLYELLKSnnfqgLSLSLIRKFAKQILQALQFLHKLNIIHCDLKPENILLkqPSKSSIKVID 161
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  156 FGISAQIGATLarrLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLG-ItaieLAELQP--PLF 216
Cdd:cd14210 162 FGSSCFEGEKV---YTYIQSRFYRAPE---VILGLPYDTAIDMWSLGcI----LAELYTgyPLF 215
STKc_IRAK cd14066
Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases ...
23-271 1.15e-22

Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. Some IRAKs may also play roles in T- and B-cell signaling, and adaptive immunity. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK-1, -2, and -4 are ubiquitously expressed and are active kinases, while IRAK-M is only induced in monocytes and macrophages and is an inactive kinase. Variations in IRAK genes are linked to diverse diseases including infection, sepsis, cancer, and autoimmune diseases. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain (a pseudokinase domain in the case of IRAK3), and a C-terminal domain; IRAK-4 lacks the C-terminal domain. This subfamily includes plant receptor-like kinases (RLKs) including Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1). BAK1 functions in BR (brassinosteroid)-regulated plant development and in pathways involved in plant resistance to pathogen infection and herbivore attack. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The IRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270968 [Multi-domain]  Cd Length: 272  Bit Score: 98.50  E-value: 1.15e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvSGDLVALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD 101
Cdd:cd14066   1 IGSGGFGTVYKGVLE-NGTVVAVKRLNEMNCAASKKeFLTELEMLGRLRHPNLVRLLGYCLESDEKLLVYEYMPNGSLED 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQVTGSLSEL---QISYVCREVLQGLAYLHSQKK---IHRDIKGANILINDAGEVRLADFGISAQI--GATLARRLSFI 173
Cdd:cd14066  80 RLHCHKGSPPLpwpQRLKIAKGIARGLEYLHEECPppiIHGDIKSSNILLDEDFEPKLTDFGLARLIppSESVSKTSAVK 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQP-----------PRL-KEK 240
Cdd:cd14066 160 GTIGYLAPE----YIRTGrVSTKSDVYSFGVVLLELLTGKPA-VDENRENASRKDLVEWVESkgkeeledildKRLvDDD 234
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  241 GKWSAAFHNFIKVTL--TKS-PKKRPSATKMLSH 271
Cdd:cd14066 235 GVEEEEVEALLRLALlcTRSdPSLRPSMKEVVQM 268
STKc_ERK5 cd07855
Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; ...
9-202 1.16e-22

Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ERK5 (also called Big MAPK1 (BMK1) or MAPK7) has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. MAPKs are important mediators of cellular responses to extracellular signals. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270842 [Multi-domain]  Cd Length: 336  Bit Score: 100.13  E-value: 1.16e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    9 FNRDPRdhYDLLQRLGGGTYGEVFKARDKVSGDLVALKmvKMEPDDDVSTLQK----EILILKTCRHANIVAYH------ 78
Cdd:cd07855   1 FDVGDR--YEPIETIGSGAYGVVCSAIDTKSGQKVAIK--KIPNAFDVVTTAKrtlrELKILRHFKHDNIIAIRdilrpk 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   79 GSYLWLQKLWICMEFCgAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI 158
Cdd:cd07855  77 VPYADFKDVYVVLDLM-ESDLHHIIHSDQPLTLEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNENCELKIGDFGM 155
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  159 SAQIGATLARRLSF----IGTPYWMAPEVAAVAlkGGYNELCDIWSLG 202
Cdd:cd07855 156 ARGLCTSPEEHKYFmteyVATRWYRAPELMLSL--PEYTQAIDMWSVG 201
STKc_nPKC_eta cd05590
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the ...
21-208 1.46e-22

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-eta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270742 [Multi-domain]  Cd Length: 323  Bit Score: 99.60  E-value: 1.46e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV--STLQKEILILkTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05590   1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDvilQDDDVecTMTEKRILSL-ARNHPFLTQLYCCFQTPDRLFFVMEFVN 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ---IGATLArrlSF 172
Cdd:cd05590  80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEgifNGKTTS---TF 156
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 6005810  173 IGTPYWMAPEVAAVALkggYNELCDIWSLGITAIEL 208
Cdd:cd05590 157 CGTPDYIAPEILQEML---YGPSVDWWAMGVLLYEM 189
STKc_ULK1_2-like cd14120
Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar ...
23-203 1.58e-22

Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. ULK2 is ubiquitously expressed and is essential in autophagy induction. ULK1 and ULK2 have unique and cell-type specific roles, but also display partially redundant roles in starvation-induced autophagy. They both display neuron-specific functions: ULK1 is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, and axon branching; ULK2 plays a role in axon development. The ULK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271022 [Multi-domain]  Cd Length: 256  Bit Score: 97.82  E-value: 1.58e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDL-VALK-MVKMEPDDDVSTLQKEILILKTCRHANIVAY-------HGSYLwlqklwiCMEF 93
Cdd:cd14120   1 IGHGAFAVVFKGRHRKKPDLpVAIKcITKKNLSKSQNLLGKEIKILKELSHENVVALldcqetsSSVYL-------VMEY 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---------VRLADFGI-----S 159
Cdd:cd14120  74 CNGGDLADYLQAKGTLSEDTIRVFLQQIAAAMKALHSKGIVHRDLKPQNILLSHNSGrkpspndirLKIADFGFarflqD 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  160 AQIGATLArrlsfiGTPYWMAPEvaaVALKGGYNELCDIWSLGI 203
Cdd:cd14120 154 GMMAATLC------GSPMYMAPE---VIMSLQYDAKADLWSIGT 188
PK_eIF2AK_GCN2_rpt1 cd14012
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or ...
55-271 2.62e-22

Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270914 [Multi-domain]  Cd Length: 254  Bit Score: 97.05  E-value: 2.62e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   55 DVSTLQKEILILKTCRHANIVAYHG--------SYLWlqKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLA 126
Cdd:cd14012  41 QIQLLEKELESLKKLRHPNLVSYLAfsierrgrSDGW--KVYLLTEYAPGGSLSELLDSVGSVPLDTARRWTLQLLEALE 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  127 YLHSQKKIHRDIKGANILI-NDAGE--VRLADFGISAQIGATLARRLSFIGTP-YWMAPEVAAVALKggYNELCDIWSLG 202
Cdd:cd14012 119 YLHRNGVVHKSLHAGNVLLdRDAGTgiVKLTDYSLGKTLLDMCSRGSLDEFKQtYWLPPELAQGSKS--PTRKTDVWDLG 196
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  203 ITAIELaelqppLFDVHplrvlflmTKSGYQPPR-LKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14012 197 LLFLQM------LFGLD--------VLEKYTSPNpVLVSLDLSASLQDFLSKCLSLDPKKRPTALELLPH 252
STKc_SnRK2 cd14662
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
17-204 2.63e-22

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271132 [Multi-domain]  Cd Length: 257  Bit Score: 97.15  E-value: 2.63e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVstlQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14662   2 YELVKDIGSGNFGVARLMRNKETKELVAVKYIErgLKIDENV---QREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYA 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND--AGEVRLADFGISAQiGATLARRLSF 172
Cdd:cd14662  79 AGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGspAPRLKICDFGYSKS-SVLHSQPKST 157
                       170       180       190
                ....*....|....*....|....*....|...
gi 6005810  173 IGTPYWMAPEVAAvalKGGYN-ELCDIWSLGIT 204
Cdd:cd14662 158 VGTPAYIAPEVLS---RKEYDgKVADVWSCGVT 187
STKc_MSK_N cd05583
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
23-277 3.49e-22

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270735 [Multi-domain]  Cd Length: 268  Bit Score: 97.08  E-value: 3.49e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARdKVSG----DLVALKMVKmepddDVSTLQK---------EILILKTCRHAN-IVAYHGSYLWLQKLW 88
Cdd:cd05583   2 LGTGAYGKVFLVR-KVGGhdagKLYAMKVLK-----KATIVQKaktaehtmtERQVLEAVRQSPfLVTLHYAFQTDAKLH 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSL-QDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ-IGATL 166
Cdd:cd05583  76 LILDYVNGGELfTHLYQ-REHFTESEVRIYIGEIVLALEHLHKLGIIYRDIKLENILLDSEGHVVLTDFGLSKEfLPGEN 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVaavaLKG---GYNELCDIWSLGITAIELAELQPPlFDVH---------PLRVLflmtKSgyQP 234
Cdd:cd05583 155 DRAYSFCGTIEYMAPEV----VRGgsdGHDKAVDWWSLGVLTYELLTGASP-FTVDgernsqseiSKRIL----KS--HP 223
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 6005810  235 PRLKEkgkWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQP 277
Cdd:cd05583 224 PIPKT---FSAEAKDFILKLLEKDPKKRLGAGPRGAHEIKEHP 263
STKc_SGK2 cd05603
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; ...
23-216 3.93e-22

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK2 shows a more restricted distribution than SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. The SGK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270754 [Multi-domain]  Cd Length: 321  Bit Score: 98.12  E-value: 3.93e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05603   3 IGKGSFGKVLLAKRKCDGKFYAVKVLQkktiLKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTSEKLYFVLDYVNGGE 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYW 178
Cdd:cd05603  83 LFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHVVLTDFGLCKEGMEPEETTSTFCGTPEY 162
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 6005810  179 MAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05603 163 LAPEVLR---KEPYDRTVDWWCLGAVLYEMLYGLPPFY 197
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
17-272 4.00e-22

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 96.50  E-value: 4.00e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQkEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14107   4 YEVKEEIGRGTFGFVKRVTHKGNGECCAAKFIPLRSSTRARAFQ-ERDILARLSHRRLTCLLDQFETRKTLILILELCSS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAGE-VRLADFGISAQIgATLARRLSFIG 174
Cdd:cd14107  83 EELLDRLFLKGVVTEAEVKLYIQQVLEGIGYLHGMNILHLDIKPDNILmVSPTREdIKICDFGFAQEI-TPSEHQFSKYG 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  175 TPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPlRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVT 254
Cdd:cd14107 162 SPEFVAPEIVH---QEPVSAATDIWALGVIAYLSLTCHSPFAGEND-RATLLNVAEGVVSWDTPEITHLSEDAKDFIKRV 237
                       250
                ....*....|....*...
gi 6005810  255 LTKSPKKRPSATKMLSHQ 272
Cdd:cd14107 238 LQPDPEKRPSASECLSHE 255
STKc_AMPK_alpha cd14079
Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein ...
16-272 4.06e-22

Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. In response to decreased ATP levels, it enhances energy-producing processes and inhibits energy-consuming pathways. Once activated, AMPK phosphorylates a broad range of downstream targets, with effects in carbohydrate metabolism and uptake, lipid and fatty acid biosynthesis, carbon energy storage, and inflammation, among others. Defects in energy homeostasis underlie many human diseases including Type 2 diabetes, obesity, heart disease, and cancer. As a result, AMPK has emerged as a therapeutic target in the treatment of these diseases. The AMPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270981 [Multi-domain]  Cd Length: 256  Bit Score: 96.57  E-value: 4.06e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVayhgsylwlqKLW---- 88
Cdd:cd14079   3 NYILGKTLGVGSFGKVKLAEHELTGHKVAVKILnrqKIKSLDMEEKIRREIQILKLFRHPHII----------RLYevie 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ------ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaqi 162
Cdd:cd14079  73 tptdifMVMEYVSGGELFDYIVQKGRLSEDEARRFFQQIISGVEYCHRHMVVHRDLKPENLLLDSNMNVKIADFGLS--- 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 gaTLARRLSFI----GTPYWMAPEVAAVALKGGYNelCDIWSLGItaIELAELQPPL-FDVHPLRVLFLMTKSG--YQPP 235
Cdd:cd14079 150 --NIMRDGEFLktscGSPNYAAPEVISGKLYAGPE--VDVWSCGV--ILYALLCGSLpFDDEHIPNLFKKIKSGiyTIPS 223
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 6005810  236 RLkekgkwSAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14079 224 HL------SPGARDLIKRMLVVDPLKRITIPEIRQHP 254
STKc_LIMK2 cd14222
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the ...
23-208 4.40e-22

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK2 activation is induced by transforming growth factor-beta l (TGFb-l) and shares the same subcellular location as the cofilin family member twinfilin, which may be its biological substrate. LIMK2 plays a role in spermatogenesis, and may contribute to tumor progression and metastasis formation in some cancer cells. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271124 [Multi-domain]  Cd Length: 272  Bit Score: 96.94  E-value: 4.40e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14222   1 LGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKRLNLLTEFIEGGTLKDF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI---------------GATLA 167
Cdd:cd14222  81 LRADDPFPWQQKVSFAKGIASGMAYLHSMSIIHRDLNSHNCLIKLDKTVVVADFGLSRLIveekkkpppdkpttkKRTLR 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  168 R-----RLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIEL 208
Cdd:cd14222 161 KndrkkRYTVVGNPYWMAPEM----LNGkSYDEKVDIFSFGIVLCEI 203
STKc_CaMK_like cd14088
Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to ...
15-217 6.09e-22

Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized STKs with similarity to CaMKs, which are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. This uncharacterized subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270990 [Multi-domain]  Cd Length: 265  Bit Score: 96.25  E-value: 6.09e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQK-EILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14088   1 DRYDLGQVIKTEEFCEIFRAKDKTTGKLYTCKKFLKRDGRKVRKAAKnEINILKMVKHPNILQLVDVFETRKEYFIFLEL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDA---GEVRLADFGIsAQIGATLARRL 170
Cdd:cd14088  81 ATGREVFDWILDQGYYSERDTSNVIRQVLEAVAYLHSLKIVHRNLKLENLVYYNRlknSKIVISDFHL-AKLENGLIKEP 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  171 SfiGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFD 217
Cdd:cd14088 160 C--GTPEYLAPEVVG---RQRYGRPVDCWAIGVIMYILLSGNPPFYD 201
STKc_MARK cd14072
Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; ...
17-269 6.23e-22

Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MARKs, also called Partitioning-defective 1 (Par1) proteins, function as regulators of diverse cellular processes in nematodes, Drosophila, yeast, and vertebrates. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. Vertebrates contain four isoforms, namely MARK1 (or Par1c), MARK2 (or Par1b), MARK3 (Par1a), and MARK4 (or MARKL1). Known substrates of MARKs include the cell cycle-regulating phosphatase Cdc25, tyrosine phosphatase PTPH1, MAPK scaffolding protein KSR1, class IIa histone deacetylases, and plakophilin 2. The MARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270974 [Multi-domain]  Cd Length: 253  Bit Score: 96.05  E-value: 6.23e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPdddvSTLQK---EILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd14072   2 YRLLKTIGKGNFAKVKLARHVLTGREVAIKIIdktQLNP----SSLQKlfrEVRIMKILNHPNIVKLFEVIETEKTLYLV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgaTLARRL 170
Cdd:cd14072  78 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TPGNKL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 -SFIGTPYWMAPEVAAVALKGGYNelCDIWSLGITAIELAELQPPlFDVHPLRvlflmtksgyqppRLKE---KGKWSAA 246
Cdd:cd14072 156 dTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLP-FDGQNLK-------------ELRErvlRGKYRIP 219
                       250       260
                ....*....|....*....|....*....
gi 6005810  247 FH------NFIKVTLTKSPKKRPSATKML 269
Cdd:cd14072 220 FYmstdceNLLKKFLVLNPSKRGTLEQIM 248
STKc_DCKL3 cd14185
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called ...
16-271 7.13e-22

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called Doublecortin-like and CAM kinase-like 3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL3 (or DCAMKL3) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. DCKL3 contains a single DCX domain (instead of a tandem) and a C-terminal kinase domain with similarity to CAMKs. It has been shown to interact with tubulin and JIP1/2. The DCKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271087 [Multi-domain]  Cd Length: 258  Bit Score: 95.79  E-value: 7.13e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVstLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14185   1 HYEIGRTIGDGNFAVVKECRHWNENQEYAMKIIdksKLKGKEDM--IESEILIIKSLSHPNIVKLFEVYETEKEIYLILE 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQIGATLar 168
Cdd:cd14185  79 YVRGGDLFDAIIESVKFTEHDAALMIIDLCEALVYIHSKHIVHRDLKPENLLVqhnpDKSTTLKLADFGLAKYVTGPI-- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 rLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDvhPLR---VLFLMTKSG---YQPPRlkekgk 242
Cdd:cd14185 157 -FTVCGTPTYVAPEILS---EKGYGLEVDMWAAGVILYILLCGFPPFRS--PERdqeELFQIIQLGhyeFLPPY------ 224
                       250       260       270
                ....*....|....*....|....*....|..
gi 6005810  243 W---SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14185 225 WdniSEAAKDLISRLLVVDPEKRYTAKQVLQH 256
STKc_PKB cd05571
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer ...
23-262 7.66e-22

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of phosphoinositide 3-kinase (PI3K) and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270723 [Multi-domain]  Cd Length: 322  Bit Score: 97.43  E-value: 7.66e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL 99
Cdd:cd05571   3 LGKGTFGKVILCREKATGELYAIKILKKEviiAKDEVAHTLTENRVLQNTRHPFLTSLKYSFQTNDRLCFVMEYVNGGEL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ---IGATLArrlSFIGTP 176
Cdd:cd05571  83 FFHLSRERVFSEDRTRFYGAEIVLALGYLHSQGIVYRDLKLENLLLDKDGHIKITDFGLCKEeisYGATTK---TFCGTP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDvHPLRVLF---LMTKSGYqPPRLKEKGKwsaafhNFIKV 253
Cdd:cd05571 160 EYLAPE---VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-RDHEVLFeliLMEEVRF-PSTLSPEAK------SLLAG 228

                ....*....
gi 6005810  254 TLTKSPKKR 262
Cdd:cd05571 229 LLKKDPKKR 237
STKc_MLK2 cd14148
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the ...
23-225 8.80e-22

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK2 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K10. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK2 is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK2 also binds to normal huntingtin (Htt), which is important in neuronal transcription, development, and survival. MLK2 does not bind to the polyglutamine-expanded Htt, which is implicated in the pathogeneis of Huntington's disease, leading to neuronal toxicity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271050 [Multi-domain]  Cd Length: 258  Bit Score: 95.82  E-value: 8.80e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEPDDDVST----LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd14148   2 IGVGGFGKVYKGLWR--GEEVAVKAARQDPDEDIAVtaenVRQEARLFWMLQHPNIIALRGVCLNPPHLCLVMEYARGGA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCrEVLQGLAYLHSQKK---IHRDIKGANILINDAGE--------VRLADFGISAQIGATla 167
Cdd:cd14148  80 LNRALAGKKVPPHVLVNWAV-QIARGMNYLHNEAIvpiIHRDLKSSNILILEPIEnddlsgktLKITDFGLAREWHKT-- 156
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  168 RRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF 225
Cdd:cd14148 157 TKMSAAGTYAWMAPEVIRLSL---FSKSSDVWSFGVLLWELLTGEVPYREIDALAVAY 211
STKc_MLCK3 cd14192
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze ...
23-272 9.08e-22

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK3 (or MYLK3) phosphorylates myosin regulatory light chain 2 and controls the contraction of cardiac muscles. It is expressed specifically in both the atrium and ventricle of the heart and its expression is regulated by the cardiac protein Nkx2-5. MLCK3 plays an important role in cardiogenesis by regulating the assembly of cardiac sarcomeres, the repeating contractile unit of striated muscle. MLCK3 contains a single kinase domain near the C-terminus and a unique N-terminal half, and unlike MLCK1/2, it does not appear to be regulated by Ca2+/calmodulin. The MLCK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271094 [Multi-domain]  Cd Length: 261  Bit Score: 95.80  E-value: 9.08e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD- 101
Cdd:cd14192  12 LGGGRFGQVHKCTELSTGLTLAAKIIKVKGAKEREEVKNEINIMNQLNHVNLIQLYDAFESKTNLTLIMEYVDGGELFDr 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAG-EVRLADFGISAQIGATLARRLSFiGTPYWM 179
Cdd:cd14192  92 ITDESYQLTELDAILFTRQICEGVHYLHQHYILHLDLKPENILcVNSTGnQIKIIDFGLARRYKPREKLKVNF-GTPEFL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVAavalkgGYNEL---CDIWSLG-ITAIELAELQPPLFDVHPLRVLFLMTKS----GYQPPRLKEKGKwsaafhNFI 251
Cdd:cd14192 171 APEVV------NYDFVsfpTDMWSVGvITYMLLSGLSPFLGETDAETMNNIVNCKwdfdAEAFENLSEEAK------DFI 238
                       250       260
                ....*....|....*....|.
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14192 239 SRLLVKEKSCRMSATQCLKHE 259
STKc_phototropin_like cd05574
Catalytic domain of Phototropin-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
15-262 1.02e-21

Catalytic domain of Phototropin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. In addition to plant phototropins, included in this subfamily are predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2, which plays a role in growth and development by controlling entry into the conidiation program. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270726 [Multi-domain]  Cd Length: 316  Bit Score: 96.92  E-value: 1.02e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05574   1 DHFKKIKLLGKGDVGRVYLVRLKGTGKLFAMKVLDkeeMIKRNKVKRVLTEREILATLDHPFLPTLYASFQTSTHLCFVM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVT--GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT---- 165
Cdd:cd05574  81 DYCPGGELFRLLQKQpgKRLPEEVARFYAAEVLLALEYLHLLGFVYRDLKPENILLHESGHIMLTDFDLSKQSSVTpppv 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 -------------------------LARRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELaelqppLFDVH 219
Cdd:cd05574 161 rkslrkgsrrssvksieketfvaepSARSNSFVGTEEYIAPEV----IKGdGHGSAVDWWTLGILLYEM------LYGTT 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  220 PLR------VLFLMTKsgyQPPRLKEKGKWSAAFHNFIKVTLTKSPKKR 262
Cdd:cd05574 231 PFKgsnrdeTFSNILK---KELTFPESPPVSSEAKDLIRKLLVKDPSKR 276
STKc_MLCK cd14103
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the ...
23-271 1.12e-21

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module. MLCK2, MLCK3, and MLCK4 share a simpler domain architecture of a single kinase domain near the C-terminus and the absence of Ig-like or FN3 domains. The MLCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271005 [Multi-domain]  Cd Length: 250  Bit Score: 94.99  E-value: 1.12e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL--- 99
Cdd:cd14103   1 LGRGKFGTVYRCVEKATGKELAAKFIKCRKAKDREDVRNEIEIMNQLRHPRLLQLYDAFETPREMVLVMEYVAGGELfer 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 --QDIYQvtgsLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAG-EVRLADFGisaqigatLARRLS---- 171
Cdd:cd14103  81 vvDDDFE----LTERDCILFMRQICEGVQYMHKQGILHLDLKPENILcVSRTGnQIKIIDFG--------LARKYDpdkk 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 ---FIGTPYWMAPEVAAvalkggYNEL---CDIWSLG-ITAIELAELQPPLFDvHPLRVLFLMTksgyqpprlkeKGKW- 243
Cdd:cd14103 149 lkvLFGTPEFVAPEVVN------YEPIsyaTDMWSVGvICYVLLSGLSPFMGD-NDAETLANVT-----------RAKWd 210
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 6005810  244 ---------SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14103 211 fddeafddiSDEAKDFISKLLVKDPRKRMSAAQCLQH 247
STKc_Sty1_Hog1 cd07856
Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases ...
17-271 1.30e-21

Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. It is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response. Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. MAPKs are important mediators of cellular responses to extracellular signals. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270843 [Multi-domain]  Cd Length: 328  Bit Score: 96.87  E-value: 1.30e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVkMEPdddVST------LQKEILILKTCRHANIVAyhgsylwLQKLWIc 90
Cdd:cd07856  12 YSDLQPVGMGAFGLVCSARDQLTGQNVAVKKI-MKP---FSTpvlakrTYRELKLLKHLRHENIIS-------LSDIFI- 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 mefcgaGSLQDIYQVTGSLS------------ELQ-ISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd07856  80 ------SPLEDIYFVTELLGtdlhrlltsrplEKQfIQYFLYQILRGLKYVHSAGVIHRDLKPSNILVNENCDLKICDFG 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 IsAQIGAtlARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPR- 236
Cdd:cd07856 154 L-ARIQD--PQMTGYVSTRYYRAPEIMLTWQK--YDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDd 228
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  237 ------------------LKEKGKWSAAFHN-------FIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07856 229 vinticsentlrfvqslpKRERVPFSEKFKNadpdaidLLEKMLVFDPKKRISAAEALAH 288
PKc_like cd13968
Catalytic domain of the Protein Kinase superfamily; The PK superfamily contains the large ...
23-157 1.50e-21

Catalytic domain of the Protein Kinase superfamily; The PK superfamily contains the large family of typical PKs that includes serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins, as well as pseudokinases that lack crucial residues for catalytic activity and/or ATP binding. It also includes phosphoinositide 3-kinases (PI3Ks), aminoglycoside 3'-phosphotransferases (APHs), choline kinase (ChoK), Actin-Fragmin Kinase (AFK), and the atypical RIO and Abc1p-like protein kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to their target substrates; these include serine/threonine/tyrosine residues in proteins for typical or atypical PKs, the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives for PI3Ks, the 4-hydroxyl of PtdIns for PI4Ks, and other small molecule substrates for APH/ChoK and similar proteins such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine.


Pssm-ID: 270870 [Multi-domain]  Cd Length: 136  Bit Score: 91.35  E-value: 1.50e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHA--NIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd13968   1 MGEGASAKVFWAEGECTTIGVAVKIGDDVNNEEGEDLESEMDILRRLKGLelNIPKVLVTEDVDGPNILLMELVKGGTLI 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  101 DiYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd13968  81 A-YTQEEELDEKDVESIMYQLAECMRLLHSFHLIHRDLNNDNILLSEDGNVKLIDFG 136
STKc_PLK4 cd14186
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the ...
17-271 1.81e-21

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK4, also called SAK or STK18, is structurally different from other PLKs in that it contains only one polo box that can form two adjacent polo boxes and a functional PDB by homodimerization. It is required for late mitotic progression, cell survival, and embryonic development. It localizes to centrosomes and is required for centriole duplication and chromosomal stability. Overexpression of PLK4 may be associated with colon tumors. The PLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271088 [Multi-domain]  Cd Length: 256  Bit Score: 94.54  E-value: 1.81e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14186   3 FKVLNLLGKGSFACVYRARSLHTGLEVAIKMIDkkaMQKAGMVQRVRNEVEIHCQLKHPSILELYNYFEDSNYVYLVLEM 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd14186  83 CHNGEMSRyLKNRKKPFTEDEARHFMHQIVTGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHFTM 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPYWMAPEVAAVALKGGYNelcDIWSLGITAIELAELQPPlFDVHPLR-VLFLMTKSGYQPPRLkekgkWSAAFHNFI 251
Cdd:cd14186 163 CGTPNYISPEIATRSAHGLES---DVWSLGCMFYTLLVGRPP-FDTDTVKnTLNKVVLADYEMPAF-----LSREAQDLI 233
                       250       260
                ....*....|....*....|
gi 6005810  252 KVTLTKSPKKRPSATKMLSH 271
Cdd:cd14186 234 HQLLRKNPADRLSLSSVLDH 253
STKc_RSK1_C cd14175
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called ...
15-276 1.90e-21

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called Ribosomal protein S6 kinase alpha-1 or 90kDa ribosomal protein S6 kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK1 is also called S6K-alpha-1, RPS6KA1, p90RSK1 or MAPK-activated protein kinase 1a (MAPKAPK-1a). It is a component of the insulin transduction pathway, regulating the function of IRS1. It also interacts with PKA and promotes its inactivation. RSK1 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271077 [Multi-domain]  Cd Length: 291  Bit Score: 95.48  E-value: 1.90e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVstlqkEILiLKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14175   1 DGYVVKETIGVGSYSVCKRCVHKATNMEYAVKVIdksKRDPSEEI-----EIL-LRYGQHPNIITLKDVYDDGKHVYLVT 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAGE---VRLADFGISAQIGATLA 167
Cdd:cd14175  75 ELMRGGELLDKILRQKFFSEREASSVLHTICKTVEYLHSQGVVHRDLKPSNILyVDESGNpesLRICDFGFAKQLRAENG 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKeKGKW---S 244
Cdd:cd14175 155 LLMTPCYTANFVAPEVLK---RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS-GGNWntvS 230
                       250       260       270
                ....*....|....*....|....*....|..
gi 6005810  245 AAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14175 231 DAAKDLVSKMLHVDPHQRLTAKQVLQHPWITQ 262
KIND smart00750
kinase non-catalytic C-lobe domain; It is an interaction domain identified as being similar to ...
97-272 2.17e-21

kinase non-catalytic C-lobe domain; It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features


Pssm-ID: 214801  Cd Length: 176  Bit Score: 92.08  E-value: 2.17e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810      97 GSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRdikganilINDAGEVRLADFGISAQIGATLARrlsfiGT 175
Cdd:smart00750   1 VSLADILEVRGRpLNEEEIWAVCLQCLGALRELHRQAKSGN--------ILLTWDGLLKLDGSVAFKTPEQSR-----PD 67
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     176 PYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLR-----VLFLMTKSgyQPPRLKEKGKWSAA--FH 248
Cdd:smart00750  68 PYFMAPE---VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSaileiLLNGMPAD--DPRDRSNLEGVSAArsFE 142
                          170       180
                   ....*....|....*....|....
gi 6005810     249 NFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:smart00750 143 DFMRLCASRLPQRREAANHYLAHC 166
PKc_TOPK cd14001
Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer ...
20-269 2.20e-21

Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer T-cell-originated protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TOPK, also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX. It contributes to cancer development and progression by downregulating the function of tumor suppressor p53 and reducing cell-cycle regulatory proteins. TOPK is found highly expressed in breast and skin cancer cells. The TOPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270903 [Multi-domain]  Cd Length: 292  Bit Score: 95.16  E-value: 2.20e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLV----ALKMV--KMEPDDDV---STLQKEILILKTCRHANIVAYHG-SYLWLQKLWI 89
Cdd:cd14001   4 MKKLGYGTGVNVYLMKRSPRGGSSrspwAVKKInsKCDKGQRSlyqERLKEEAKILKSLNHPNIVGFRAfTKSEDGSLCL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAgSLQDI-----YQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILI-NDAGEVRLADFGISAQI 162
Cdd:cd14001  84 AMEYGGK-SLNDLieeryEAGLGPFPAATILKVALSIARALEYLHNEKKIlHGDIKSGNVLIkGDFESVKLCDFGVSLPL 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLS----FIGTPYWMAPEvaavALKGGY--NELCDIWSLGITAIELAELQPPLFDVHPLRVLFL---------- 226
Cdd:cd14001 163 TENLEVDSDpkaqYVGTEPWKAKE----ALEEGGviTDKADIFAYGLVLWEMMTLSVPHLNLLDIEDDDEdesfdedeed 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  227 -MTKSGYQPPRLKEK-GKWSAAFHNFIK---VTLTKSPKKRPSATKML 269
Cdd:cd14001 239 eEAYYGTLGTRPALNlGELDDSYQKVIElfyACTQEDPKDRPSAAHIV 286
STKc_Mnk cd14090
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase ...
15-271 2.59e-21

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase signal-integrating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270992 [Multi-domain]  Cd Length: 289  Bit Score: 95.17  E-value: 2.59e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLL-QRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWICME 92
Cdd:cd14090   1 DLYKLTgELLGEGAYASVQTCINLYTGKEYAVKIIEKHPGHSRSRVFREVETLHQCQgHPNILQLIEYFEDDERFYLVFE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQI------- 162
Cdd:cd14090  81 KMRGGPLLSHIEKRVHFTEQEASLVVRDIASALDFLHDKGIAHRDLKPENILCESMDKvspVKICDFDLGSGIklsstsm 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 -GATLARRLSFIGTPYWMAPEV--AAVALKGGYNELCDIWSLGITAIELAELQPPLF----------------DVHPLrv 223
Cdd:cd14090 161 tPVTTPELLTPVGSAEYMAPEVvdAFVGEALSYDKRCDLWSLGVILYIMLCGYPPFYgrcgedcgwdrgeacqDCQEL-- 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  224 LFLMTKSG-YQPPRlKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14090 239 LFHSIQEGeYEFPE-KEWSHISAEAKDLISHLLVRDASQRYTAEQVLQH 286
STKc_LIMK1 cd14221
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the ...
23-268 2.68e-21

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK1 activation is induced by bone morphogenic protein, vascular endothelial growth factor, and thrombin. It plays roles in microtubule disassembly and cell cycle progression, and is critical in the regulation of neurite outgrowth. LIMK1 knockout mice show abnormalities in dendritic spine morphology and synaptic function. LIMK1 is one of the genes deleted in patients with Williams Syndrome, which is characterized by distinct craniofacial features, cardiovascular problems, as well as behavioral and neurological abnormalities. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271123 [Multi-domain]  Cd Length: 267  Bit Score: 94.64  E-value: 2.68e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14221   1 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLS--ELQISYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--------------GATL 166
Cdd:cd14221  81 IKSMDSHYpwSQRVSFA-KDIASGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMvdektqpeglrslkKPDR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRLSFIGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSG----YQPPRLkekg 241
Cdd:cd14221 160 KKRYTVVGNPYWMAPEM----INGrSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGfldrYCPPNC---- 231
                       250       260
                ....*....|....*....|....*..
gi 6005810  242 kwSAAFHNFIKVTLTKSPKKRPSATKM 268
Cdd:cd14221 232 --PPSFFPIAVLCCDLDPEKRPSFSKL 256
PTKc_Tyk2_rpt2 cd05080
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze ...
20-208 2.96e-21

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Tyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270664 [Multi-domain]  Cd Length: 283  Bit Score: 94.97  E-value: 2.96e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEV----FKARDKVSGDLVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHG--SYLWLQKLWICME 92
Cdd:cd05080   9 IRDLGEGHFGKVslycYDPTNDGTGEMVAVKALKADcGPQHRSGWKQEIDILKTLYHENIVKYKGccSEQGGKSLQLIME 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDiYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-GATLARRLS 171
Cdd:cd05080  89 YVPLGSLRD-YLPKHSIGLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVpEGHEYYRVR 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  172 FIG-TP-YWMAPEvaavALK-GGYNELCDIWSLGITAIEL 208
Cdd:cd05080 168 EDGdSPvFWYAPE----CLKeYKFYYASDVWSFGVTLYEL 203
STKc_MSK2_N cd05614
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
17-208 3.81e-21

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270765 [Multi-domain]  Cd Length: 332  Bit Score: 95.37  E-value: 3.81e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARdKVSG----DLVALKMVK----MEPDDDVSTLQKEILILKTCRHAN-IVAYHGSYLWLQKL 87
Cdd:cd05614   2 FELLKVLGTGAYGKVFLVR-KVSGhdanKLYAMKVLRkaalVQKAKTVEHTRTERNVLEHVRQSPfLVTLHYAFQTDAKL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSL-QDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ-IGAT 165
Cdd:cd05614  81 HLILDYVSGGELfTHLYQ-RDHFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEfLTEE 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 6005810  166 LARRLSFIGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05614 160 KERTYSFCGTIEYMAPEI--IRGKSGHGKAVDWWSLGILMFEL 200
PKc_Mps1 cd14131
Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle ...
17-271 4.34e-21

Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK); Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TTK/Mps1 is a spindle checkpoint kinase that was first discovered due to its necessity in centrosome duplication in budding yeast. It was later found to function in the spindle assembly checkpoint, which monitors the proper attachment of chromosomes to the mitotic spindle. In yeast, substrates of Mps1 include the spindle pole body components Spc98p, Spc110p, and Spc42p. The TTK/Mps1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271033 [Multi-domain]  Cd Length: 271  Bit Score: 93.82  E-value: 4.34e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKvSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHA-NIVAYHGSYL--WLQKLWICM 91
Cdd:cd14131   3 YEILKQLGKGGSSKVYKVLNP-KKKIYALKRVDLEGADEqtLQSYKNEIELLKKLKGSdRIIQLYDYEVtdEDDYLYMVM 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EfCGAGSLQDIY--QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDaGEVRLADFGISAQI--GATLA 167
Cdd:cd14131  82 E-CGEIDLATILkkKRPKPIDPNFIRYYWKQMLEAVHTIHEEGIVHSDLKPANFLLVK-GRLKLIDFGIAKAIqnDTTSI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEvAAVALKGGYNEL--------CDIWSLGITAIELAELQPPLFDV-HPLRVLFLMTKSGYQPPRLK 238
Cdd:cd14131 160 VRDSQVGTLNYMSPE-AIKDTSASGEGKpkskigrpSDVWSLGCILYQMVYGKTPFQHItNPIAKLQAIIDPNHEIEFPD 238
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  239 EKGKWSAafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14131 239 IPNPDLI---DVMKRCLQRDPKKRPSIPELLNH 268
STKc_TSSK4-like cd14162
Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs ...
17-203 4.46e-21

Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. It phosphorylates Cre-Responsive Element Binding protein (CREB), facilitating the binding of CREB to the specific cis cAMP responsive element (CRE), which is important in activating genes related to germ cell differentiation. Mutations in the human TSSK4 gene is associated with infertile Chinese men with impaired spermatogenesis. The TSSK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271064 [Multi-domain]  Cd Length: 259  Bit Score: 93.52  E-value: 4.46e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVST--LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14162   2 YIVGKTLGHGSYAVVKKAYSTKHKCKVAIKIVsKKKAPEDYLQkfLPREIEVIKGLKHPNLICFYEAIETTSRVYIIMEL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI--SAQIGATLARRLS 171
Cdd:cd14162  82 AENGDLLDYIRKNGALPEPQARRWFRQLVAGVEYCHSKGVVHRDLKCENLLLDKNNNLKITDFGFarGVMKTKDGKPKLS 161
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 6005810  172 --FIGTPYWMAPEVaavaLKG-GYN-ELCDIWSLGI 203
Cdd:cd14162 162 etYCGSYAYASPEI----LRGiPYDpFLSDIWSMGV 193
STKc_PKB_alpha cd05594
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); ...
1-262 4.56e-21

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270746 [Multi-domain]  Cd Length: 356  Bit Score: 95.87  E-value: 4.56e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    1 MDVVDPDIFNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTCRHANIVAY 77
Cdd:cd05594  11 MEVSLTKPKHKVTMNDFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEvivAKDEVAHTLTENRVLQNSRHPFLTAL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADF 156
Cdd:cd05594  91 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVvYRDLKLENLMLDKDGHIKITDF 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GISAQ---IGATLArrlSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF--DVHPLRVLFLMTKSG 231
Cdd:cd05594 171 GLCKEgikDGATMK---TFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYnqDHEKLFELILMEEIR 244
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  232 YqPPRLKEKGKwsaafhNFIKVTLTKSPKKR 262
Cdd:cd05594 245 F-PRTLSPEAK------SLLSGLLKKDPKQR 268
STKc_IRAK4 cd14158
Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; ...
10-270 5.49e-21

Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain, and a C-terminal domain; IRAK-4 lacks the C-terminal domain. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK4 plays a critical role in NFkB activation by its interaction with MyD88, which acts as a scaffold that enables IRAK4 to phosphorylate and activate IRAK1 and/or IRAK2. It also plays an important role in type I IFN production induced by TLR7/8/9. The IRAK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271060 [Multi-domain]  Cd Length: 288  Bit Score: 94.10  E-value: 5.49e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   10 NRDPRDHYDLLQRLGGGTYGEVFKARdkVSGDLVALKmvKMEPDDDVST------LQKEILILKTCRHANIVAYHGSYLW 83
Cdd:cd14158  10 NFDERPISVGGNKLGEGGFGVVFKGY--INDKNVAVK--KLAAMVDISTedltkqFEQEIQVMAKCQHENLVELLGYSCD 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAGSLQD---IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI-- 158
Cdd:cd14158  86 GPQLCLVYTYMPNGSLLDrlaCLNDTPPLSWHMRCKIAQGTANGINYLHENNHIHRDIKSANILLDETFVPKISDFGLar 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 -SAQIGATLARRlSFIGTPYWMAPEvaavALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRL 237
Cdd:cd14158 166 aSEKFSQTIMTE-RIVGTTAYMAPE----ALRGEITPKSDIFSFGVVLLEIITGLPP-VDENRDPQLLLDIKEEIEDEEK 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 6005810  238 -------KEKGKWSA----AFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd14158 240 tiedyvdKKMGDWDStsieAMYSVASQCLNDKKNRRPDIAKVQQ 283
STKc_nPKC_epsilon cd05591
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze ...
23-214 6.17e-21

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-epsilon subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270743 [Multi-domain]  Cd Length: 321  Bit Score: 94.48  E-value: 6.17e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDV--STLQKEILILkTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd05591   3 LGKGSFGKVMLAERKGTDEVYAIKVLKKDvilQDDDVdcTMTEKRILAL-AAKHPFLTALHSCFQTKDRLFFVMEYVNGG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPY 177
Cdd:cd05591  82 DLMFQIQRARKFDEPRARFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGKTTTTFCGTPD 161
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 6005810  178 WMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd05591 162 YIAPEILQ---ELEYGPSVDWWALGVLMYEMMAGQPP 195
PTKc_Src_like cd05034
Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
22-208 8.95e-21

Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. The Src-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270630 [Multi-domain]  Cd Length: 248  Bit Score: 92.35  E-value: 8.95e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDDdvstLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05034   2 KLGAGQFGEVWMGVWNGTTK-VAVKTLKpgtMSPEA----FLQEAQIMKKLRHDKLVQLYAVCSDEEPIYIVTELMSKGS 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDiYQVTGSLSELQIS---YVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfi 173
Cdd:cd05034  77 LLD-YLRTGEGRALRLPqliDMAAQIASGMAYLESRNYIHRDLAARNILVGENNVCKVADFGLARLIedDEYTARE---- 151
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 6005810  174 GTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05034 152 GAKFpikWTAPE---AALYGRFTIKSDVWSFGILLYEI 186
STKc_nPKC_theta cd05619
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze ...
15-215 9.24e-21

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270770 [Multi-domain]  Cd Length: 331  Bit Score: 94.22  E-value: 9.24e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDV--STLQKEILILkTCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd05619   5 EDFVLHKMLGKGSFGKVFLAELKGTNQFFAIKALKKDVvlmDDDVecTMVEKRVLSL-AWEHPFLTHLFCTFQTKENLFF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARR 169
Cdd:cd05619  84 VMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  170 LSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPL 215
Cdd:cd05619 164 STFCGTPDYIAPE---ILLGQKYNTSVDWWSFGVLLYEMLIGQSPF 206
PTKc_Csk_like cd05039
Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
13-270 9.77e-21

Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of Csk, Chk, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. The Csk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270635 [Multi-domain]  Cd Length: 256  Bit Score: 92.41  E-value: 9.77e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKvsGDLVALKMVKmepdDDVSTLQK---EILILKTCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd05039   4 NKKDLKLGELIGKGEFGDVMLGDYR--GQKVAVKCLK----DDSTAAQAflaEASVMTTLRHPNLVQLLGVVLEGNGLYI 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSL---SELQISYvCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd05039  78 VTEYMAKGSLVDYLRSRGRAvitRKDQLGF-ALDVCEGMEYLESKKFVHRDLAARNVLVSEDNVAKVSDFGLAKEASSNQ 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ArrlsfIGT-PY-WMAPEvaavALKGG-YNELCDIWSLGITAIELAEL------QPPLFDVHPlRVlflmtKSGYqppRL 237
Cdd:cd05039 157 D-----GGKlPIkWTAPE----ALREKkFSTKSDVWSFGILLWEIYSFgrvpypRIPLKDVVP-HV-----EKGY---RM 218
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  238 KEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd05039 219 EAPEGCPPEVYKVMKNCWELDPAKRPTFKQLRE 251
STKc_IKK cd13989
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
23-207 1.15e-20

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The IKK complex functions as a master regulator of Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. It is composed of two kinases, IKKalpha and IKKbeta, and the regulatory subunit IKKgamma or NEMO (NF-kB Essential MOdulator). IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. There are two IKK pathways that regulate NF-kB signaling, called the classical (involving IKKbeta and NEMO) and non-canonical (involving IKKalpha) pathways. The classical pathway regulates the majority of genes activated by NF-kB. The IKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270891 [Multi-domain]  Cd Length: 289  Bit Score: 93.28  E-value: 1.15e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQK---EILILKTCRHANIVAYHGSYLWLQKLWI------CMEF 93
Cdd:cd13989   1 LGSGGFGYVTLWKHQDTGEYVAIKKCRQELSPSDKNRERwclEVQIMKKLNHPNVVSARDVPPELEKLSPndlpllAMEY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQI--GAT 165
Cdd:cd13989  81 CSGGDLRKVLNQPENccgLKESEVRTLLSDISSAISYLHENRIIHRDLKPENIVLQQGGGrviYKLIDLGYAKELdqGSL 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  166 LArrlSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIE 207
Cdd:cd13989 161 CT---SFVGTLQYLAPELFE---SKKYTCTVDYWSFGTLAFE 196
PTKc_Srm_Brk cd05148
Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal ...
13-264 1.20e-20

Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and Breast tumor kinase (Brk); PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk (also called protein tyrosine kinase 6) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Brk has been found to be overexpressed in a majority of breast tumors. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The Srm/Brk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133248 [Multi-domain]  Cd Length: 261  Bit Score: 92.50  E-value: 1.20e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd05148   4 PREEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQdIYQVTGSLSELQIS---YVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARR 169
Cdd:cd05148  83 LMEKGSLL-AFLRSPEGQVLPVAsliDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG--------LARL 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 L-------SFIGTPY-WMAPEVAAvalKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMTkSGYQPPRlkeK 240
Cdd:cd05148 154 IkedvylsSDKKIPYkWTAPEAAS---HGTFSTKSDVWSFGILLYEMFTYgQVPYPGMNNHEVYDQIT-AGYRMPC---P 226
                       250       260
                ....*....|....*....|....
gi 6005810  241 GKWSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05148 227 AKCPQEIYKIMLECWAAEPEDRPS 250
STKc_SGK1 cd05602
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
13-216 1.30e-20

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. The SGK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270753 [Multi-domain]  Cd Length: 339  Bit Score: 93.93  E-value: 1.30e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDhYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd05602   6 PSD-FHFLKVIGKGSFGKVLLARHKSDEKFYAVKVLQkkaiLKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTTDKLY 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR 168
Cdd:cd05602  85 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEPNGT 164
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  169 RLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05602 165 TSTFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFY 209
STKc_MLK cd14061
Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the ...
23-223 1.36e-20

Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270963 [Multi-domain]  Cd Length: 258  Bit Score: 92.07  E-value: 1.36e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEPDDDVS----TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd14061   2 IGVGGFGKVYRGIWR--GEEVAVKAARQDPDEDISvtleNVRQEARLFWMLRHPNIIALRGVCLQPPNLCLVMEYARGGA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDI---YQVTGSLS---ELQISyvcrevlQGLAYLHSQKK---IHRDIKGANILINDAGE--------VRLADFGISAQ 161
Cdd:cd14061  80 LNRVlagRKIPPHVLvdwAIQIA-------RGMNYLHNEAPvpiIHRDLKSSNILILEAIEnedlenktLKITDFGLARE 152
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  162 IGATlaRRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRV 223
Cdd:cd14061 153 WHKT--TRMSAAGTYAWMAPEVIKSST---FSKASDVWSYGVLLWELLTGEVPYKGIDGLAV 209
STKc_CDK8_like cd07842
Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs ...
17-214 1.45e-20

Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270834 [Multi-domain]  Cd Length: 316  Bit Score: 93.50  E-value: 1.45e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVS--GDLVALKMVKMEPDDDVSTLQ---KEILILKTCRHANIVAYHGSYL--WLQKLWI 89
Cdd:cd07842   2 YEIEGCIGRGTYGRVYKAKRKNGkdGKEYAIKKFKGDKEQYTGISQsacREIALLRELKHENVVSLVEVFLehADKSVYL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGagslQDIYQV--------TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFG 157
Cdd:cd07842  82 LFDYAE----HDLWQIikfhrqakRVSIPPSMVKSLLWQILNGIHYLHSNWVLHRDLKPANILVmgegPERGVVKIGDLG 157
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  158 ISAQIGATLARRLSFIG---TPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQPP 214
Cdd:cd07842 158 LARLFNAPLKPLADLDPvvvTIWYRAPEL----LLGArhYTKAIDIWAIGCIFAELLTLEPI 215
STKc_RSK3_C cd14178
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called ...
15-281 1.46e-20

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called Ribosomal protein S6 kinase alpha-2 or 90kDa ribosomal protein S6 kinase 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK3 is also called S6K-alpha-2, RPS6KA2, p90RSK2 or MAPK-activated protein kinase 1c (MAPKAPK-1c). RSK3 binds muscle A-kinase anchoring protein (mAKAP)-b directly and regulates concentric cardiac myocyte growth. The RSK3 gene, RPS6KA2, is a putative tumor suppressor gene in sporadic epithelial ovarian cancer and variations to the gene may be associated with rectal cancer risk. RSK3 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271080 [Multi-domain]  Cd Length: 293  Bit Score: 93.16  E-value: 1.46e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVstlqkEILiLKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14178   3 DGYEIKEDIGIGSYSVCKRCVHKATSTEYAVKIIdksKRDPSEEI-----EIL-LRYGQHPNIITLKDVYDDGKFVYLVM 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISAQIGATLA 167
Cdd:cd14178  77 ELMRGGELLDRILRQKCFSEREASAVLCTITKTVEYLHSQGVVHRDLKPSNILYMDESgnpeSIRICDFGFAKQLRAENG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIE-LAELQP----PlfDVHPLRVLFLMTKSGYQpprlKEKGK 242
Cdd:cd14178 157 LLMTPCYTANFVAPEVLK---RQGYDAACDIWSLGILLYTmLAGFTPfangP--DDTPEEILARIGSGKYA----LSGGN 227
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  243 W---SAAFHNFIKVTLTKSPKKRPSATKMLSH------QLVSQPGLNR 281
Cdd:cd14178 228 WdsiSDAAKDIVSKMLHVDPHQRLTAPQVLRHpwivnrEYLSQNQLSR 275
STKc_MSK1_N cd05613
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
16-262 2.12e-20

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270764 [Multi-domain]  Cd Length: 290  Bit Score: 92.37  E-value: 2.12e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARdKVSG----DLVALKMVK----MEPDDDVSTLQKEILILKTCRHAN-IVAYHGSYLWLQK 86
Cdd:cd05613   1 NFELLKVLGTGAYGKVFLVR-KVSGhdagKLYAMKVLKkatiVQKAKTAEHTRTERQVLEHIRQSPfLVTLHYAFQTDTK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ-IGAT 165
Cdd:cd05613  80 LHLILDYINGGELFTHLSQRERFTENEVQIYIGEIVLALEHLHKLGIIYRDIKLENILLDSSGHVVLTDFGLSKEfLLDE 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSFIGTPYWMAPEVaavaLKG---GYNELCDIWSLGITAIELAELQPPlFDVH---------PLRVLflmtKSgyQ 233
Cdd:cd05613 160 NERAYSFCGTIEYMAPEI----VRGgdsGHDKAVDWWSLGVLMYELLTGASP-FTVDgeknsqaeiSRRIL----KS--E 228
                       250       260
                ....*....|....*....|....*....
gi 6005810  234 PPRLKEkgkWSAAFHNFIKVTLTKSPKKR 262
Cdd:cd05613 229 PPYPQE---MSALAKDIIQRLLMKDPKKR 254
STKc_obscurin_rpt2 cd14110
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
17-269 2.45e-20

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271012 [Multi-domain]  Cd Length: 257  Bit Score: 91.52  E-value: 2.45e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14110   5 YAFQTEINRGRFSVVRQCEEKRSGQMLAAKIIPYKPEDKQLVL-REYQVLRRLSHPRIAQLHSAYLSPRHLVLIEELCSG 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGiSAQI----GATLARRLSF 172
Cdd:cd14110  84 PELLYNLAERNSYSEAEVTDYLWQILSAVDYLHSRRILHLDLRSENMIITEKNLLKIVDLG-NAQPfnqgKVLMTDKKGD 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 IGTPywMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLkeKGKWSAAFHNFI 251
Cdd:cd14110 163 YVET--MAPEL----LEGqGAGPQTDIWAIGVTAFIMLSADYPVSSDLNWERDRNIRKGKVQLSRC--YAGLSGGAVNFL 234
                       250
                ....*....|....*...
gi 6005810  252 KVTLTKSPKKRPSATKML 269
Cdd:cd14110 235 KSTLCAKPWGRPTASECL 252
STKc_p70S6K cd05584
Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs ...
20-214 3.04e-20

Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270736 [Multi-domain]  Cd Length: 323  Bit Score: 92.47  E-value: 3.04e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGD---LVALKMVK----MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd05584   1 LKVLGKGGYGKVFQVRKTTGSDkgkIFAMKVLKkasiVRNQKDTAHTKAERNILEAVKHPFIVDLHYAFQTGGKLYLILE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd05584  81 YLSGGELFMHLEREGIFMEDTACFYLAEITLALGHLHSLGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHDGTVTHTF 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  173 IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd05584 161 CGTIEYMAPE---ILTRSGHGKAVDWWSLGALMYDMLTGAPP 199
STKc_CASK cd14094
Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein ...
13-271 3.25e-20

Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CASK belongs to the MAGUK (membrane-associated guanylate kinase) protein family, which functions as multiple domain adaptor proteins and is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The enzymatically inactive GuK domain in MAGUK proteins mediates protein-protein interactions and associates intramolecularly with the SH3 domain. In addition, CASK contains a catalytic kinase and two L27 domains. It is highly expressed in the nervous system and plays roles in synaptic protein targeting, neural development, and regulation of gene expression. Binding partners include parkin (a Parkinson's disease molecule), neurexin (adhesion molecule), syndecans, calcium channel proteins, CINAP (nucleosome assembly protein), transcription factor Tbr-1, and the cytoplasmic adaptor proteins Mint1, Veli/mLIN-7/MALS, SAP97, caskin, and CIP98. Deletion or mutations in the CASK gene have been implicated in X-linked mental retardation. The CASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270996 [Multi-domain]  Cd Length: 300  Bit Score: 92.22  E-value: 3.25e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKM-----EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKL 87
Cdd:cd14094   1 FEDVYELCEVIGKGPFSVVRRCIHRETGQQFAVKIVDVakftsSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFC-GAGSLQDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISA 160
Cdd:cd14094  81 YMVFEFMdGADLCFEIVKRADAgfvYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLaskENSAPVKLGGFGVAI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 QIGATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF----DVHPLRVLFLMTKSGYQPPR 236
Cdd:cd14094 161 QLGESGLVAGGRVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYgtkeRLFEGIIKGKYKMNPRQWSH 237
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  237 LKEKGKwsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14094 238 ISESAK------DLVRRMLMLDPAERITVYEALNH 266
STKc_MLCK4 cd14193
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze ...
23-271 3.37e-20

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. MLCK4 (or MYLK4 or SgK085) contains a single kinase domain near the C-terminus. The MLCK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271095 [Multi-domain]  Cd Length: 261  Bit Score: 91.13  E-value: 3.37e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD- 101
Cdd:cd14193  12 LGGGRFGQVHKCEEKSSGLKLAAKIIKARSQKEKEEVKNEIEVMNQLNHANLIQLYDAFESRNDIVLVMEYVDGGELFDr 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLADFGISAQIGATLARRLSFiGTPYWM 179
Cdd:cd14193  92 IIDENYNLTELDTILFIKQICEGIQYMHQMYILHLDLKPENILCvsREANQVKIIDFGLARRYKPREKLRVNF-GTPEFL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVAavalkgGYNEL---CDIWSLGITAIELAELQPPLFDVHPLRVL--FLMTKSGYQPPRLKEKgkwSAAFHNFIKVT 254
Cdd:cd14193 171 APEVV------NYEFVsfpTDMWSLGVIAYMLLSGLSPFLGEDDNETLnnILACQWDFEDEEFADI---SEEAKDFISKL 241
                       250
                ....*....|....*..
gi 6005810  255 LTKSPKKRPSATKMLSH 271
Cdd:cd14193 242 LIKEKSWRMSASEALKH 258
STKc_CdkB_plant cd07837
Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; ...
15-271 3.67e-20

Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270830 [Multi-domain]  Cd Length: 294  Bit Score: 91.82  E-value: 3.67e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--VSTLQKEILILKTCRHANIVAY-----HGSYLWLQKL 87
Cdd:cd07837   1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMEEEgvPSTALREVSLLQMLSQSIYIVRlldveHVEENGKPLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQ--DIYQvTGSLSELQISYVCR---EVLQGLAYLHSQKKIHRDIKGANILINDA-GEVRLADFGISAQ 161
Cdd:cd07837  81 YLVFEYLDTDLKKfiDSYG-RGPHNPLPAKTIQSfmyQLCKGVAHCHSHGVMHRDLKPQNLLVDKQkGLLKIADLGLGRA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 IGATLARRLSFIGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQpPLF----DVHPLRVLF--LMTKSGYQ 233
Cdd:cd07837 160 FTIPIKSYTHEIVTLWYRAPEV----LLGSthYSTPVDMWSVGCIFAEMSRKQ-PLFpgdsELQQLLHIFrlLGTPNEEV 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  234 PPRLKEKGKW-----------SAAFH-------NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07837 235 WPGVSKLRDWheypqwkpqdlSRAVPdlepegvDLLTKMLAYDPAKRISAKAALQH 290
STKc_p38gamma cd07880
Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase ...
14-277 4.72e-20

Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase (also called MAPK12); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38gamma/MAPK12 is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143385 [Multi-domain]  Cd Length: 343  Bit Score: 92.32  E-value: 4.72e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCRHANIVAYHGSY---LWLQKL- 87
Cdd:cd07880  14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRayRELRLLKHMKHENVIGLLDVFtpdLSLDRFh 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 --WICMEFCGA--GSLQDIYQvtgsLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG 163
Cdd:cd07880  94 dfYLVMPFMGTdlGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 ATLArrlSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAeLQPPLF--DVHPLRVLFLMTKSGYQPPRLKEKG 241
Cdd:cd07880 170 SEMT---GYVVTRWYRAPEVILNWMH--YTQTVDIWSVGCIMAEML-TGKPLFkgHDHLDQLMEIMKVTGTPSKEFVQKL 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 6005810  242 KWSAAfHNFIKvTLTKSPKK---------RPSATKMLSHQLVSQP 277
Cdd:cd07880 244 QSEDA-KNYVK-KLPRFRKKdfrsllpnaNPLAVNVLEKMLVLDA 286
STKc_NDR_like cd05599
Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs ...
15-203 4.96e-20

Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270750 [Multi-domain]  Cd Length: 324  Bit Score: 91.91  E-value: 4.96e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05599   1 EDFEPLKVIGRGAFGEVRLVRKKDTGHVYAMKKLRkseMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEENLYLIM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSL------QDIyqvtgsLSELQIS-YVCREVLqGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-G 163
Cdd:cd05599  81 EFLPGGDMmtllmkKDT------LTEEETRfYIAETVL-AIESIHKLGYIHRDIKPDNLLLDARGHIKLSDFGLCTGLkK 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  164 ATLArrLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGI 203
Cdd:cd05599 154 SHLA--YSTVGTPDYIAPE---VFLQKGYGKECDWWSLGV 188
STKc_NDR2 cd05627
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze ...
15-220 5.41e-20

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR2 (also called STK38-like) plays a role in proper centrosome duplication. In addition, it is involved in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. NDR2 is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270776 [Multi-domain]  Cd Length: 366  Bit Score: 92.81  E-value: 5.41e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05627   2 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRkadMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAqiGATLARRLS 171
Cdd:cd05627  82 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT--GLKKAHRTE 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 F-------------------------------------IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd05627 160 FyrnlthnppsdfsfqnmnskrkaetwkknrrqlaystVGTPDYIAPE---VFMQTGYNKLCDWWSLGVIMYEMLIGYPP 236

                ....*.
gi 6005810  215 LFDVHP 220
Cdd:cd05627 237 FCSETP 242
PKc_LIMK_like_unk cd14156
Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs ...
23-208 5.79e-20

Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This group is composed of uncharacterized proteins with similarity to LIMK and Testicular or testis-specific protein kinase (TESK). LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271058 [Multi-domain]  Cd Length: 256  Bit Score: 90.27  E-value: 5.79e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVstLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd14156   1 IGSGFFSKVYKVTHGATGKVMVVKIYKNDVDQHK--IVREISLLQKLSHPNIVRYLGICVKDEKLHPILEYVSGGCLEEL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTG-SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVR---LADFGISAQIG----ATLARRLSFIG 174
Cdd:cd14156  79 LAREElPLSWREKVELACDISRGMVYLHSKNIYHRDLNSKNCLIRVTPRGReavVTDFGLAREVGempaNDPERKLSLVG 158
                       170       180       190
                ....*....|....*....|....*....|....*
gi 6005810  175 TPYWMAPEVaavaLKGG-YNELCDIWSLGITAIEL 208
Cdd:cd14156 159 SAFWMAPEM----LRGEpYDRKVDVFSFGIVLCEI 189
PTKc_Frk_like cd05068
Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
13-208 5.89e-20

Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Frk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270653 [Multi-domain]  Cd Length: 267  Bit Score: 90.54  E-value: 5.89e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDDdvstLQKEILILKTCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd05068   6 DRKSLKLLRKLGSGQFGEVWEGLWNNTTP-VAVKTLKpgtMDPED----FLREAQIMKKLRHPKLIQLYAVCTLEEPIYI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS--------- 159
Cdd:cd05068  81 ITELMKHGSLLEYLQGKGRSLQLpQLIDMAAQVASGMAYLESQNYIHRDLAARNVLVGENNICKVADFGLArvikvedey 160
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  160 -AQIGATLARRlsfigtpyWMAPEVAAvalkggYNELC---DIWSLGITAIEL 208
Cdd:cd05068 161 eAREGAKFPIK--------WTAPEAAN------YNRFSiksDVWSFGILLTEI 199
STKc_CaMKIV cd14085
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
15-281 6.87e-20

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type IV; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKIV is found predominantly in neurons and immune cells. It is activated by the binding of calcium/CaM and phosphorylation by CaMKK (alpha or beta). The CaMKK-CaMKIV cascade participates in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors. It also is implicated in T-cell development and signaling, cytokine secretion, and signaling through Toll-like receptors, and is thus, pivotal in immune response and inflammation. The CaMKIV subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270987 [Multi-domain]  Cd Length: 294  Bit Score: 91.04  E-value: 6.87e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVstLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14085   3 DFFEIESELGRGATSVVYRCRQKGTQKPYAVKKLKKTVDKKI--VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQIGATLARRlS 171
Cdd:cd14085  81 TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPdapLKIADFGLSKIVDQQVTMK-T 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEVaavaLKG-GYNELCDIWSLG-ITAIELAELQpPLFDVHPLRVLF---LMTKSGYQPPrlkekgkW--- 243
Cdd:cd14085 160 VCGTPGYCAPEI----LRGcAYGPEVDMWSVGvITYILLCGFE-PFYDERGDQYMFkriLNCDYDFVSP-------Wwdd 227
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  244 -SAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPGLNR 281
Cdd:cd14085 228 vSLNAKDLVKKLIVLDPKKRLTTQQALQHPWVTGKAANF 266
STKc_TGFbR2_like cd14055
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II ...
21-183 6.89e-20

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as TGFbR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. TGFbR2 acts as the receptor for TGFbeta, which is crucial in growth control and homeostasis in many different tissues. It plays roles in regulating apoptosis and in maintaining the balance between self renewal and cell loss. It also plays a key role in maintaining vascular integrity and in regulating responses to genotoxic stress. Mutations in TGFbR2 can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. The TGFbR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270957 [Multi-domain]  Cd Length: 295  Bit Score: 90.90  E-value: 6.89e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSG----DLVAlkmVKMEPDDDVSTLQ--KEILILKTCRHANIVAY-----HGSYLWLQkLWI 89
Cdd:cd14055   1 KLVGKGRFAEVWKAKLKQNAsgqyETVA---VKIFPYEEYASWKneKDIFTDASLKHENILQFltaeeRGVGLDRQ-YWL 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDiYQVTGSLSELQISYVCREVLQGLAYLHSQK------KI---HRDIKGANILINDAGEVRLADFGISA 160
Cdd:cd14055  77 ITAYHENGSLQD-YLTRHILSWEDLCKMAGSLARGLAHLHSDRtpcgrpKIpiaHRDLKSSNILVKNDGTCVLADFGLAL 155
                       170       180
                ....*....|....*....|....*..
gi 6005810  161 QIGATLAR----RLSFIGTPYWMAPEV 183
Cdd:cd14055 156 RLDPSLSVdelaNSGQVGTARYMAPEA 182
STKc_Sid2p_like cd05600
Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the ...
16-202 6.93e-20

Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. The Sid2p-like group is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270751 [Multi-domain]  Cd Length: 386  Bit Score: 92.79  E-value: 6.93e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMepdddvSTLQK--EILILKTCRhaNIVAYHGSyLWLQKL------ 87
Cdd:cd05600  12 DFQILTQVGQGGYGSVFLARKKDTGEICALKIMKK------KVLFKlnEVNHVLTER--DILTTTNS-PWLVKLlyafqd 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 ----WICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG-----I 158
Cdd:cd05600  83 penvYLAMEYVPGGDFRTLLNNSGILSEEHARFYIAEMFAAISSLHQLGYIHRDLKPENFLIDSSGHIKLTDFGlasgtL 162
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  159 SAQIGATLARRL--------------------------------SFIGTPYWMAPEVaavaLKG-GYNELCDIWSLG 202
Cdd:cd05600 163 SPKKIESMKIRLeevkntafleltakerrniyramrkedqnyanSVVGSPDYMAPEV----LRGeGYDLTVDYWSLG 235
STKc_LRRK cd14000
Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the ...
23-270 7.49e-20

Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. Vertebrates contain two members, LRRK1 and LRRK2, which show complementary expression in the brain. Mutations in LRRK2 are linked to both familial and sporadic forms of Parkinson's disease. The normal roles of LRRKs are not clearly defined. They may be involved in mitogen-activated protein kinase (MAPK) pathways, protein translation control, programmed cell death pathways, and cytoskeletal dynamics. The LRRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270902 [Multi-domain]  Cd Length: 275  Bit Score: 90.37  E-value: 7.49e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEP---------------------DDDVSTLQKEILILKTCRHANIVAYHGsy 81
Cdd:cd14000   2 LGDGGFGSVYRASYK--GEPVAVKIFNKHTssnfanvpadtmlrhlratdaMKNFRLLRQELTVLSHLHHPSIVYLLG-- 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   82 LWLQKLWICMEFCGAGSLQDIYQ----VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-----NDAGEVR 152
Cdd:cd14000  78 IGIHPLMLVLELAPLGSLDHLLQqdsrSFASLGRTLQQRIALQVADGLRYLHSAMIIYRDLKSHNVLVwtlypNSAIIIK 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  153 LADFGISAQIGATLArrLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKsGY 232
Cdd:cd14000 158 IADYGISRQCCRMGA--KGSEGTPGFRAPEIARGNVI--YNEKVDVFSFGMLLYEILSGGAPMVGHLKFPNEFDIHG-GL 232
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  233 QPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd14000 233 RPPLKQYECAPWPEVEVLMKKCWKENPQQRPTAVTVVS 270
STKc_GRK cd05577
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs ...
23-262 7.72e-20

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. They contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7, which are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270729 [Multi-domain]  Cd Length: 278  Bit Score: 90.66  E-value: 7.72e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALK-----MVKMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLWICMEFCGAG 97
Cdd:cd05577   1 LGRGGFGEVCACQVKATGKMYACKkldkkRIKKKKGETMALNEKIILEKVSSPFIVSLAY--AFETKDKLCLVLTLMNGG 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQ-DIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfI 173
Cdd:cd05577  79 DLKyHIYNVgTRGFSEARAIFYAAEIICGLEHLHNRFIVYRDLKPENILLDDHGHVRISDLGLAVEFkgGKKIKGR---V 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAELQPPlFDVHPLRV----LFLMTKSgyQPPRLKEkgKWSAAF 247
Cdd:cd05577 156 GTHGYMAPEV----LQKEvaYDFSVDWFALGCMLYEMIAGRSP-FRQRKEKVdkeeLKRRTLE--MAVEYPD--SFSPEA 226
                       250
                ....*....|....*
gi 6005810  248 HNFIKVTLTKSPKKR 262
Cdd:cd05577 227 RSLCEGLLQKDPERR 241
PTKc_Jak_rpt2 cd05038
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily ...
13-208 8.26e-20

Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270634 [Multi-domain]  Cd Length: 284  Bit Score: 90.52  E-value: 8.26e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKAR----DKVSGDLVALKMVK-MEPDDDVSTLQKEILILKTCRHANIVAYHG-SYLWLQK 86
Cdd:cd05038   2 EERHLKFIKQLGEGHFGSVELCRydplGDNTGEQVAVKSLQpSGEEQHMSDFKREIEILRTLDHEYIVKYKGvCESPGRR 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 -LWICMEFCGAGSLQDIYQVTGS--LSELQISYvCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIg 163
Cdd:cd05038  82 sLRLIMEYLPSGSLRDYLQRHRDqiDLKRLLLF-ASQICKGMEYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL- 159
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 aTLARRLSFIGTP-----YWMAPEvaAVALKGGYNElCDIWSLGITAIEL 208
Cdd:cd05038 160 -PEDKEYYYVKEPgespiFWYAPE--CLRESRFSSA-SDVWSFGVTLYEL 205
STKc_ROCK cd05596
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
10-217 8.71e-20

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270747 [Multi-domain]  Cd Length: 352  Bit Score: 91.67  E-value: 8.71e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   10 NRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKM---VKMEPDDDVSTLQKEILILKtcrHAN---IVAYHGSYLW 83
Cdd:cd05596  21 LRMNAEDFDVIKVIGRGAFGEVQLVRHKSTKKVYAMKLlskFEMIKRSDSAFFWEERDIMA---HANsewIVQLHYAFQD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAG---SLQDIYQVTgslsELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA 160
Cdd:cd05596  98 DKYLYMVMDYMPGGdlvNLMSNYDVP----EKWARFYTAEVVLALDAIHSMGFVHRDVKPDNMLLDASGHLKLADFGTCM 173
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  161 QIGAT-LARRLSFIGTPYWMAPEVaavaLK-----GGYNELCDIWSLGITAIELAELQPPLFD 217
Cdd:cd05596 174 KMDKDgLVRSDTAVGTPDYISPEV----LKsqggdGVYGRECDWWSVGVFLYEMLVGDTPFYA 232
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
23-234 9.05e-20

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 89.82  E-value: 9.05e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEP--DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd13978   1 LGSGGFGTVSKARHVSWFGMVAIKCLHSSPncIEERKALLKEAEKMERARHSYVLPLLGVCVERRSLGLVMEYMENGSLK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISY-VCREVLQGLAYLHSQKK--IHRDIKGANILINDAGEVRLADFGISAQIGATLARRLS-----F 172
Cdd:cd13978  81 SLLEREIQDVPWSLRFrIIHEIALGMNFLHNMDPplLHHDLKPENILLDNHFHVKISDFGLSKLGMKSISANRRrgtenL 160
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  173 IGTPYWMAPEvaavALKGGY---NELCDIWSLGITAIE-LAELQPPLFDVHPLRVLFLMTKsGYQP 234
Cdd:cd13978 161 GGTPIYMAPE----AFDDFNkkpTSKSDVYSFAIVIWAvLTRKEPFENAINPLLIMQIVSK-GDRP 221
STKc_p38alpha cd07877
Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase ...
15-274 9.67e-20

Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase (also called MAPK14); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38alpha/MAPK14 is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. p38 kinases MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143382 [Multi-domain]  Cd Length: 345  Bit Score: 91.64  E-value: 9.67e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmEPDDDV---STLQKEILILKTCRHANIVAY------HGSYLWLQ 85
Cdd:cd07877  17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIihaKRTYRELRLLKHMKHENVIGLldvftpARSLEEFN 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAgSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd07877  96 DVYLVTHLMGA-DLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LArrlSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIEL---AELQPPLFDVHPLRVLFLMTksGYQPPRLKEKGK 242
Cdd:cd07877 174 MT---GYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMAELltgRTLFPGTDHIDQLKLILRLV--GTPGAELLKKIS 246
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 6005810  243 WSAAfHNFIKvTLTKSPKK---------RPSATKMLSHQLV 274
Cdd:cd07877 247 SESA-RNYIQ-SLTQMPKMnfanvfigaNPLAVDLLEKMLV 285
STKc_GAK cd14036
Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs ...
26-273 1.02e-19

Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GAK, also called auxilin-2, contains an N-terminal kinase domain that phosphorylates the mu subunits of adaptor protein (AP) 1 and AP2. In addition, it contains an auxilin-1-like domain structure consisting of PTEN-like, clathrin-binding, and J domains. Like auxilin-1, GAK facilitates Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles. GAK is expressed ubiquitously and is enriched in the Golgi, unlike auxilin-1 which is nerve-specific. GAK also plays regulatory roles outside of clathrin-mediated membrane traffic including the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses through interaction with the interleukin 12 receptor. It also interacts with the androgen receptor, acting as a transcriptional coactivator, and its expression is significantly increased with the progression of prostate cancer. The GAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270938 [Multi-domain]  Cd Length: 282  Bit Score: 90.26  E-value: 1.02e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCR-HANIVAYHGS--------------YLwlqklwIC 90
Cdd:cd14036  11 GGFAFVYEAQDVGTGKEYALKRLLSNEEEKNKAIIQEINFMKKLSgHPNIVQFCSAasigkeesdqgqaeYL------LL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVTG----SLSE-LQISY-VCREVlqglAYLHSQKK--IHRDIKGANILINDAGEVRLADFGI---- 158
Cdd:cd14036  85 TELCKGQLVDFVKKVEApgpfSPDTvLKIFYqTCRAV----QHMHKQSPpiIHRDLKIENLLIGNQGQIKLCDFGSatte 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 --------SAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLflmtKS 230
Cdd:cd14036 161 ahypdyswSAQKRSLVEDEITRNTTPMYRTPEMIDLYSNYPIGEKQDIWALGCILYLLCFRKHPFEDGAKLRII----NA 236
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 6005810  231 GYQPPRLKEKGKwsaAFHNFIKVTLTKSPKKRPSATkMLSHQL 273
Cdd:cd14036 237 KYTIPPNDTQYT---VFHDLIRSTLKVNPEERLSIT-EIVEQL 275
STKc_MLK1 cd14145
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the ...
19-269 1.15e-19

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK1 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K9. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Little is known about the specific function of MLK1. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. There could be redundancy in the function of MLKs. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271047 [Multi-domain]  Cd Length: 270  Bit Score: 89.72  E-value: 1.15e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKArdKVSGDLVALKMVKMEPDDDVS----TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14145  10 LEEIIGIGGFGKVYRA--IWIGDEVAVKAARHDPDEDISqtieNVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFA 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCrEVLQGLAYLHSQK---KIHRDIKGANILINDAGE--------VRLADFGISAQIG 163
Cdd:cd14145  88 RGGPLNRVLSGKRIPPDILVNWAV-QIARGMNYLHCEAivpVIHRDLKSSNILILEKVEngdlsnkiLKITDFGLAREWH 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 ATlaRRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF--LMTKSGYQPPrlkekG 241
Cdd:cd14145 167 RT--TKMSAAGTYAWMAPEVIRSSM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYgvAMNKLSLPIP-----S 236
                       250       260
                ....*....|....*....|....*...
gi 6005810  242 KWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd14145 237 TCPEPFARLMEDCWNPDPHSRPPFTNIL 264
STKc_IRE1 cd13982
Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze ...
22-271 1.44e-19

Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is an ER-localized type I transmembrane protein with kinase and endoribonuclease domains in the cytoplasmic side. It acts as an ER stress sensor and is the oldest and most conserved component of the unfolded protein response (UPR) in eukaryotes. The UPR is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. During ER stress, IRE1 dimerizes and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and XBP1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). The Ire1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270884 [Multi-domain]  Cd Length: 269  Bit Score: 89.64  E-value: 1.44e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGE-VFkaRDKVSGDLVALKMVKMEpddDVSTLQKEI-LILKTCRHANIVAYHGSYLWLQKLWICMEFCGAgSL 99
Cdd:cd13982   8 VLGYGSEGTiVF--RGTFDGRPVAVKRLLPE---FFDFADREVqLLRESDEHPNVIRYFCTEKDRQFLYIALELCAA-SL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQ-VTGSLSELQISYVCREVLQ----GLAYLHSQKKIHRDIKGANILI---NDAGEVR--LADFGISAQ--IGATLA 167
Cdd:cd13982  82 QDLVEsPRESKLFLRPGLEPVRLLRqiasGLAHLHSLNIVHRDLKPQNILIstpNAHGNVRamISDFGLCKKldVGRSSF 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFI-GTPYWMAPEVAAVALKGGYNELCDIWSLG-ITAIELAELQPPlFDVHPLRVLFLMtKSGYQPPRLKEKGKWSA 245
Cdd:cd13982 162 SRRSGVaGTSGWIAPEMLSGSTKRRQTRAVDIFSLGcVFYYVLSGGSHP-FGDKLEREANIL-KGKYSLDKLLSLGEHGP 239
                       250       260
                ....*....|....*....|....*.
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd13982 240 EAQDLIERMIDFDPEKRPSAEEVLNH 265
STKc_DRAK2 cd14198
The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
12-271 1.47e-19

The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2 (also called STK17B). Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. DRAK2 has been implicated in inducing or enhancing apoptosis in beta cells, fibroblasts, and lymphoid cells, where it is highly expressed. It is involved in regulating many immune processes including the germinal center (GC) reaction, responses to thymus-dependent antigens, activated T cell survival, memory T cell responses. It may be involved in the development of autoimmunity. The DRAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271100 [Multi-domain]  Cd Length: 270  Bit Score: 89.60  E-value: 1.47e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRDHYDLL--QRLGGGTYGEVFKARDKVSGDLVALKMVKMEP--DDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQK 86
Cdd:cd14198   3 DNFNNFYILtsKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRrgQDCRAEILHEIAVLELAKsNPRVVNLHEVYETTSE 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQD--IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL---INDAGEVRLADFGISAQ 161
Cdd:cd14198  83 IILILEYAAGGEIFNlcVPDLAEMVSENDIIRLIRQILEGVYYLHQNNIVHLDLKPQNILlssIYPLGDIKIVDFGMSRK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  162 IGATLARRlSFIGTPYWMAPEVAavalkgGYNEL---CDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlK 238
Cdd:cd14198 163 IGHACELR-EIMGTPEYLAPEIL------NYDPIttaTDMWNIGVIAYMLLTHESPFVGEDNQETFLNISQVNVDYSE-E 234
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  239 EKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14198 235 TFSSVSQLATDFIQKLLVKNPEKRPTAEICLSH 267
STKc_MSK1_C cd14179
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
16-262 1.52e-19

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271081 [Multi-domain]  Cd Length: 310  Bit Score: 90.48  E-value: 1.52e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQR---LGGGTYGEVFKARDKVSGDLVALKMV--KMEpdddvSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWI 89
Cdd:cd14179   5 HYELDLKdkpLGEGSFSICRKCLHKKTNQEYAVKIVskRME-----ANTQREIAALKLCEgHPNIVKLHEVYHDQLHTFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISaqigatl 166
Cdd:cd14179  80 VMELLKGGELLERIKKKQHFSETEASHIMRKLVSAVSHMHDVGVVHRDLKPENLLFtdeSDNSEIKIIDFGFA------- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 arRL-----SFIGTP----YWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRvlfLMTKSGYQPPRL 237
Cdd:cd14179 153 --RLkppdnQPLKTPcftlHYAAPELLN---YNGYDESCDLWSLGVILYTMLSGQVP-FQCHDKS---LTCTSAEEIMKK 223
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  238 KEKGKWS---AAFHN-------FIKVTLTKSPKKR 262
Cdd:cd14179 224 IKQGDFSfegEAWKNvsqeakdLIQGLLTVDPNKR 258
STKc_Trio_C cd14113
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
17-272 2.17e-19

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Triple functional domain protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Triple functional domain protein (Trio), also called PTPRF-interacting protein, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. Trio plays important roles in neuronal cell migration and axon guidance. It was originally identified as an interacting partner of the of the receptor-like tyrosine phosphatase (RPTP) LAR (leukocyte-antigen-related protein), a family of receptors that function in the signaling to the actin cytoskeleton during development. Trio functions as a GEF for Rac1, RhoG, and RhoA, and is involved in the regulation of lamellipodia formation, mediating Rac1-dependent cell spreading and migration. The Trio subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271015 [Multi-domain]  Cd Length: 263  Bit Score: 88.88  E-value: 2.17e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVStlqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14113   9 YSEVAELGRGRFSVVKKCDQRGTKRAVATKFVnkKLMKRDQVT---HELGVLQSLQHPQLVGLLDTFETPTSYILVLEMA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQIGATLARRlS 171
Cdd:cd14113  86 DQGRLLDYVVRWGNLTEEKIRFYLREILEALQYLHNCRIAHLDLKPENILVDQSLSkptIKLADFGDAVQLNTTYYIH-Q 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAfHNFI 251
Cdd:cd14113 165 LLGSPEFAAPE---IILGNPVSLTSDLWSIGVLTYVLLSGVSPFLDESVEETCLNICRLDFSFPDDYFKGVSQKA-KDFV 240
                       250       260
                ....*....|....*....|.
gi 6005810  252 KVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14113 241 CFLLQMDPAKRPSAALCLQEQ 261
STKc_MLK4 cd14146
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the ...
23-225 2.21e-19

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK4 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271048 [Multi-domain]  Cd Length: 268  Bit Score: 88.94  E-value: 2.21e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEPDDDVS----TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd14146   2 IGVGGFGKVYRATWK--GQEVAVKAARQDPDEDIKataeSVRQEAKLFSMLRHPNIIKLEGVCLEEPNLCLVMEFARGGT 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 L-QDIYQVTGSLSELQISYVCREVL--------QGLAYLHSQKK---IHRDIKGANILINDAGE--------VRLADFGI 158
Cdd:cd14146  80 LnRALAAANAAPGPRRARRIPPHILvnwavqiaRGMLYLHEEAVvpiLHRDLKSSNILLLEKIEhddicnktLKITDFGL 159
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  159 SAQIGATlaRRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF 225
Cdd:cd14146 160 AREWHRT--TKMSAAGTYAWMAPEVIKSSL---FSKGSDIWSYGVLLWELLTGEVPYRGIDGLAVAY 221
STKc_SRPK cd14136
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze ...
7-271 3.06e-19

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. They play important roles in mediating pre-mRNA processing and mRNA maturation, as well as other cellular functions such as chromatin reorganization, cell cycle and p53 regulation, and metabolic signaling. Vertebrates contain three distinct SRPKs, called SRPK1-3. The SRPK homolog in budding yeast, Sky1p, recognizes and phosphorylates its substrate Npl3p, which lacks a classic RS domain but contains a single RS dipeptide at the C-terminus of its RGG domain. Npl3p is a shuttling heterogeneous nuclear ribonucleoprotein (hnRNP) that exports a distinct class of mRNA from the nucleus to the cytoplasm. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271038 [Multi-domain]  Cd Length: 320  Bit Score: 89.56  E-value: 3.06e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    7 DIFNrdprDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmepdddvS------TLQKEILILKTCRHA-------- 72
Cdd:cd14136   6 EVYN----GRYHVVRKLGWGHFSTVWLCWDLQNKRFVALKVVK-------SaqhyteAALDEIKLLKCVREAdpkdpgre 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   73 NIVAY---------HGSYlwlqklwICM--EFCGAGSLQDI--YQVTGslseLQISYV---CREVLQGLAYLHSQ-KKIH 135
Cdd:cd14136  75 HVVQLlddfkhtgpNGTH-------VCMvfEVLGPNLLKLIkrYNYRG----IPLPLVkkiARQVLQGLDYLHTKcGIIH 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  136 RDIKGANILIN-DAGEVRLADFGISAQIgatlarRLSF---IGTPYWMAPEVAavaLKGGYNELCDIWSLGITAIELA-- 209
Cdd:cd14136 144 TDIKPENVLLCiSKIEVKIADLGNACWT------DKHFtedIQTRQYRSPEVI---LGAGYGTPADIWSTACMAFELAtg 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  210 ELqppLFDVHPLR--------VLFLMTKSGYQPPRLKEKGKWSAAFHN-------------------------------- 249
Cdd:cd14136 215 DY---LFDPHSGEdysrdedhLALIIELLGRIPRSIILSGKYSREFFNrkgelrhisklkpwpledvlvekykwskeeak 291
                       330       340
                ....*....|....*....|....*.
gi 6005810  250 ----FIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14136 292 efasFLLPMLEYDPEKRATAAQCLQH 317
PK_KSR cd14063
Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to ...
18-270 3.35e-19

Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases, but there is some debate in this designation as a few groups have reported detecting kinase catalytic activity for KSRs, specifically KSR1. Vertebrates contain two KSR proteins, KSR1 and KSR2. The KSR subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270965 [Multi-domain]  Cd Length: 271  Bit Score: 88.56  E-value: 3.35e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   18 DLLQRLGGGTYGEVFKARdkVSGDlVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd14063   3 EIKEVIGKGRFGRVHRGR--WHGD-VAIKLLNIDylNEEQLEAFKEEVAAYKNTRHDNLVLFMGACMDPPHLAIVTSLCK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILInDAGEVRLADFGISAQIGATLA-RRLSFI 173
Cdd:cd14063  80 GRTLYSlIHERKEKFDFNKTVQIAQQICQGMGYLHAKGIIHKDLKSKNIFL-ENGRVVITDFGLFSLSGLLQPgRREDTL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTP-YW---MAPEVAAvALKGG--------YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKG 241
Cdd:cd14063 159 VIPnGWlcyLAPEIIR-ALSPDldfeeslpFTKASDVYAFGTVWYELLAGRWPFKEQPAESIIWQVGCGKKQSLSQLDIG 237
                       250       260
                ....*....|....*....|....*....
gi 6005810  242 KwsaAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd14063 238 R---EVKDILMQCWAYDPEKRPTFSDLLR 263
STKc_nPKC_delta cd05620
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze ...
23-215 3.53e-19

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173710 [Multi-domain]  Cd Length: 316  Bit Score: 89.23  E-value: 3.53e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDV--STLQKEILILkTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd05620   3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVvliDDDVecTMVEKRVLAL-AWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPY 177
Cdd:cd05620  82 DLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPD 161
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 6005810  178 WMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPL 215
Cdd:cd05620 162 YIAPEI----LQGlKYTFSVDWWSFGVLLYEMLIGQSPF 196
PTKc_Jak2_rpt2 cd14205
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the ...
16-208 3.54e-19

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 is widely expressed in many tissues and is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271107 [Multi-domain]  Cd Length: 284  Bit Score: 88.53  E-value: 3.54e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKAR-DKV---SGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWL--QKLWI 89
Cdd:cd14205   5 HLKFLQQLGKGNFGSVEMCRyDPLqdnTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAgrRNLRL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlaR 168
Cdd:cd14205  85 IMEYLPYGSLRDYLQKHKErIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD--K 162
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  169 RLSFIGTP-----YWMAPEVAAvalKGGYNELCDIWSLGITAIEL 208
Cdd:cd14205 163 EYYKVKEPgespiFWYAPESLT---ESKFSVASDVWSFGVVLYEL 204
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
17-217 3.61e-19

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 92.17  E-value: 3.61e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEIlilktcR---------HANIVA---------YH 78
Cdd:NF033483   9 YEIGERIGRGGMAEVYLAKDTRLDRDVAVKVLRPDLARDPEFVARFR------ReaqsaaslsHPNIVSvydvgedggIP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    79 gsYlwlqklwICMEFCgAGS-LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:NF033483  83 --Y-------IVMEYV-DGRtLKDYIREHGPLSPEEAVEIMIQILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFG 152
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810   158 IS-AQIGATLARRLSFIGTPYWMAPEVAavalKGGY-NELCDIWSLGITAIELAELQPPlFD 217
Cdd:NF033483 153 IArALSSTTMTQTNSVLGTVHYLSPEQA----RGGTvDARSDIYSLGIVLYEMLTGRPP-FD 209
STKc_CDKL5 cd07848
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs ...
15-213 3.96e-19

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270838 [Multi-domain]  Cd Length: 287  Bit Score: 88.51  E-value: 3.96e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK-MEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd07848   1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKdSEENEEVkETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQV-TGSLSELQISYVcREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG-ATLARRL 170
Cdd:cd07848  81 YVEKNMLELLEEMpNGVPPEKVRSYI-YQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSeGSNANYT 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 6005810  171 SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQP 213
Cdd:cd07848 160 EYVATRWYRSPE---LLLGAPYGKAVDMWSVGCILGELSDGQP 199
STKc_SPEG_rpt1 cd14108
Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle ...
15-205 4.13e-19

Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271010 [Multi-domain]  Cd Length: 255  Bit Score: 87.65  E-value: 4.13e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14108   2 DYYDIHKEIGRGAFSYLRRVKEKSSDLSFAAKFIPVRAKKKTSAR-RELALLAELDHKSIVRFHDAFEKRRVVIIVTELC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE--VRLADFGISAQIGATLARRLSF 172
Cdd:cd14108  81 HEELLERITKRP-TVCESEVRSYMRQLLEGIEYLHQNDVLHLDLKPENLLMADQKTdqVRICDFGNAQELTPNEPQYCKY 159
                       170       180       190
                ....*....|....*....|....*....|...
gi 6005810  173 iGTPYWMAPEVAAvalKGGYNELCDIWSLGITA 205
Cdd:cd14108 160 -GTPEFVAPEIVN---QSPVSKVTDIWPVGVIA 188
STKc_MSK_C cd14092
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
16-271 4.21e-19

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270994 [Multi-domain]  Cd Length: 311  Bit Score: 88.90  E-value: 4.21e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQR---LGGGTYGEVFKARDKVSGDLVALKMVKMEPDddvstLQKEILILKTCR-HANIVAYHGSYLWLQKLWICM 91
Cdd:cd14092   4 NYELDLReeaLGDGSFSVCRKCVHKKTGQEFAVKIVSRRLD-----TSREVQLLRLCQgHPNIVKLHEVFQDELHTYLVM 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL---INDAGEVRLADFGIsaqigATLAR 168
Cdd:cd14092  79 ELLRGGELLERIRKKKRFTESEASRIMRQLVSAVSFMHSKGVVHRDLKPENLLftdEDDDAEIKIVDFGF-----ARLKP 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTP----YWMAPEVAAVAL-KGGYNELCDIWSLGITAIELAELQPPLfdvHP----LRVLFLMTK--------SG 231
Cdd:cd14092 154 ENQPLKTPcftlPYAAPEVLKQALsTQGYDESCDLWSLGVILYTMLSGQVPF---QSpsrnESAAEIMKRiksgdfsfDG 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6005810  232 YQPPRLKEKGKwsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14092 231 EEWKNVSSEAK------SLIQGLLTVDPSKRLTMSELRNH 264
STKc_p38delta cd07879
Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase ...
17-208 5.50e-19

Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase (also called MAPK13); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38delta/MAPK13 is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143384 [Multi-domain]  Cd Length: 342  Bit Score: 89.19  E-value: 5.50e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCRHANIVAY------HGSYLWLQKLW 88
Cdd:cd07879  17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRayRELTLLKHMQHENVIGLldvftsAVSGDEFQDFY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCgagsLQDIYQVTG-SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLA 167
Cdd:cd07879  97 LVMPYM----QTDLQKIMGhPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 172
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 6005810  168 rrlSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIEL 208
Cdd:cd07879 173 ---GYVVTRWYRAPEVILNWMH--YNQTVDIWSVGCIMAEM 208
PTKc_Wee1_fungi cd14052
Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the ...
17-209 5.62e-19

Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of fungal Wee1 proteins, also called Swe1 in budding yeast and Mik1 in fission yeast. Yeast Wee1 is required to control cell size. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The fungal Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270954 [Multi-domain]  Cd Length: 278  Bit Score: 87.86  E-value: 5.62e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLV-ALKMVK---MEPDDDVSTLQkEILILKTCR---HANIVAYHGSYLWLQKLWI 89
Cdd:cd14052   2 FANVELIGSGEFSQVYKVSERVPTGKVyAVKKLKpnyAGAKDRLRRLE-EVSILRELTldgHDNIVQLIDSWEYHGHLYI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQ---DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGatL 166
Cdd:cd14052  81 QTELCENGSLDvflSELGLLGRLDEFRVWKILVELSLGLRFIHDHHFVHLDLKPANVLITFEGTLKIGDFGMATVWP--L 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 6005810  167 ARRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELA 209
Cdd:cd14052 159 IRGIEREGDREYIAPEILSEHM---YDKPADIFSLGLILLEAA 198
STKc_MOK cd07831
Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs ...
17-271 5.80e-19

Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270825 [Multi-domain]  Cd Length: 282  Bit Score: 88.10  E-value: 5.80e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD--DDVSTLqKEILILKTCR-HANIVAYHgSYLWLQK---LWIC 90
Cdd:cd07831   1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKslEQVNNL-REIQALRRLSpHPNILRLI-EVLFDRKtgrLALV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEfcgagsLQD--IYQVT----GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDaGEVRLADFGiSAqigA 164
Cdd:cd07831  79 FE------LMDmnLYELIkgrkRPLPEKRVKNYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFG-SC---R 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRLSF---IGTPYWMAPEvaaVALKGG-YNELCDIWSLGITAIELAELQpPLF----------DVH------PLRVL 224
Cdd:cd07831 148 GIYSKPPYteyISTRWYRAPE---CLLTDGyYGPKMDIWAVGCVFFEILSLF-PLFpgtneldqiaKIHdvlgtpDAEVL 223
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  225 FLMTKS---GYQPPrlKEKGKW--------SAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07831 224 KKFRKSrhmNYNFP--SKKGTGlrkllpnaSAEGLDLLKKLLAYDPDERITAKQALRH 279
STKc_CDK6 cd07862
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs ...
16-271 5.80e-19

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270846 [Multi-domain]  Cd Length: 290  Bit Score: 88.17  E-value: 5.80e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARD-KVSGDLVALKMVKMEPDDD---VSTLqKEILILK---TCRHANIVAYHGSYLWLQ--- 85
Cdd:cd07862   2 QYECVAEIGEGAYGKVFKARDlKNGGRFVALKRVRVQTGEEgmpLSTI-REVAVLRhleTFEHPNVVRLFDVCTVSRtdr 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 --KLWICMEFCGagslQDIYQVTGSLSEL-----QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI 158
Cdd:cd07862  81 etKLTLVFEHVD----QDLTTYLDKVPEPgvpteTIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 sAQIGATLARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAElQPPLF----DVHPLRVLF--------- 225
Cdd:cd07862 157 -ARIYSFQMALTSVVVTLWYRAPE---VLLQSSYATPVDLWSVGCIFAEMFR-RKPLFrgssDVDQLGKILdviglpgee 231
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  226 ------LMTKSGYQP----------PRLKEKGKwsaafhNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07862 232 dwprdvALPRQAFHSksaqpiekfvTDIDELGK------DLLLKCLTFNPAKRISAYSALSH 287
STKc_Kin1_2 cd14077
Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the ...
17-203 6.48e-19

Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of yeast Kin1, Kin2, and similar proteins. Fission yeast Kin1 is a membrane-associated kinase that is involved in regulating cell surface cohesiveness during interphase. It also plays a role during mitosis, linking actomyosin ring assembly with septum synthesis and membrane closure to ensure separation of daughter cells. Budding yeast Kin1 and Kin2 act downstream of the Rab-GTPase Sec4 and are associated with the exocytic apparatus; they play roles in the secretory pathway. The Kin1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270979 [Multi-domain]  Cd Length: 267  Bit Score: 87.50  E-value: 6.48e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV----------------KMEPDDDVSTlQKEILILKTCRHANIVAYHGS 80
Cdd:cd14077   3 WEFVKTIGAGSMGKVKLAKHIRTGEKCAIKIIprasnaglkkerekrlEKEISRDIRT-IREAALSSLLNHPHICRLRDF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   81 YLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISa 160
Cdd:cd14077  82 LRTPNHYYMLFEYVDGGQLLDYIISHGKLKEKQARKFARQIASALDYLHRNSIVHRDLKIENILISKSGNIKIIDFGLS- 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  161 QIGATLARRLSFIGTPYWMAPEVaavaLKGgyNELC----DIWSLGI 203
Cdd:cd14077 161 NLYDPRRLLRTFCGSLYFAAPEL----LQA--QPYTgpevDVWSFGV 201
PHA03209 PHA03209
serine/threonine kinase US3; Provisional
17-220 6.78e-19

serine/threonine kinase US3; Provisional


Pssm-ID: 177557 [Multi-domain]  Cd Length: 357  Bit Score: 89.16  E-value: 6.78e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKmVKMEPdddvSTLQkEILILKTCRHANIVAYHGSYLwlQKLWICMEFCGA 96
Cdd:PHA03209  68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLK-IGQKG----TTLI-EAMLLQNVNHPSVIRMKDTLV--SGAITCMVLPHY 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    97 GSlqDIYQV----TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGiSAQIGATLARRLSF 172
Cdd:PHA03209 140 SS--DLYTYltkrSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLG-AAQFPVVAPAFLGL 216
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 6005810   173 IGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHP 220
Cdd:PHA03209 217 AGTVETNAPEVLA---RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPP 261
STKc_aPKC_iota cd05618
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze ...
17-218 7.18e-19

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270769 [Multi-domain]  Cd Length: 364  Bit Score: 89.32  E-value: 7.18e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd05618  22 FDLLRVIGRGSYAKVLLVRLKKTERIYAMKVVKKElvnDDEDIDWVQTEKHVFeQASNHPFLVGLHSCFQTESRLFFVIE 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd05618 102 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF 181
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  173 IGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDV 218
Cdd:cd05618 182 CGTPNYIAPEI----LRGeDYGFSVDWWALGVLMFEMMAGRSP-FDI 223
STKc_RSK2_C cd14176
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called ...
15-271 7.31e-19

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called 90kDa ribosomal protein S6 kinase 3 or Ribosomal protein S6 kinase alpha-3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK2 is also called p90RSK3, RPS6KA3, S6K-alpha-3, or MAPK-activated protein kinase 1b (MAPKAPK-1b). RSK2 is expressed highly in the regions of the brain with high synaptic activity. It plays a role in the maintenance and consolidation of excitatory synapses. It is a specific modulator of phospholipase D in calcium-regulated exocytosis. Mutations in the RSK2 gene, RPS6KA3, cause Coffin-Lowry syndrome (CLS), a rare syndromic form of X-linked mental retardation characterized by growth and psychomotor retardation and skeletal abnormalities. RSK2 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271078 [Multi-domain]  Cd Length: 339  Bit Score: 88.92  E-value: 7.31e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDdvSTLQKEILiLKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14176  19 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD--PTEEIEIL-LRYGQHPNIITLKDVYDDGKYVYVVTELM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAG---EVRLADFGISAQIGATLARRL 170
Cdd:cd14176  96 KGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILyVDESGnpeSIRICDFGFAKQLRAENGLLM 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLF---DVHPLRVLFLMTKSGYQpprlKEKGKWSAAF 247
Cdd:cd14176 176 TPCYTANFVAPEVLE---RQGYDAACDIWSLGVLLYTMLTGYTPFAngpDDTPEEILARIGSGKFS----LSGGYWNSVS 248
                       250       260
                ....*....|....*....|....*..
gi 6005810  248 H---NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14176 249 DtakDLVSKMLHVDPHQRLTAALVLRH 275
STKc_RSK_N cd05582
N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; ...
23-208 7.37e-19

N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270734 [Multi-domain]  Cd Length: 317  Bit Score: 88.23  E-value: 7.37e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKV---SGDLVALKMVK---MEPDDDVSTlQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05582   3 LGQGSFGKVFLVRKITgpdAGTLYAMKVLKkatLKVRDRVRT-KMERDILADVNHPFIVKLHYAFQTEGKLYLILDFLRG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTP 176
Cdd:cd05582  82 GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEDGHIKLTDFGLSKESIDHEKKAYSFCGTV 161
                       170       180       190
                ....*....|....*....|....*....|..
gi 6005810  177 YWMAPEVAAvalKGGYNELCDIWSLGITAIEL 208
Cdd:cd05582 162 EYMAPEVVN---RRGHTQSADWWSFGVLMFEM 190
PTKc_Fes cd05084
Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the ...
21-203 1.20e-18

Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes (or Fps) is a cytoplasmic (or nonreceptor) PTK containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated PTK activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. The Fes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270667 [Multi-domain]  Cd Length: 252  Bit Score: 86.52  E-value: 1.20e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVSTLQkEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05084   2 ERIGRGNFGEVFSGRLRADNTPVAVKSCRetLPPDLKAKFLQ-EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ-----IGATLARRLSF 172
Cdd:cd05084  81 FLTFLRTEGPrLKVKELIRMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREeedgvYAATGGMKQIP 160
                       170       180       190
                ....*....|....*....|....*....|..
gi 6005810  173 IGtpyWMAPEvaavALK-GGYNELCDIWSLGI 203
Cdd:cd05084 161 VK---WTAPE----ALNyGRYSSESDVWSFGI 185
STKc_LATS cd05598
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the ...
15-221 1.56e-18

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270749 [Multi-domain]  Cd Length: 333  Bit Score: 87.76  E-value: 1.56e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKM--------------VKMEPDddvstlqkeilILKTCRHANIVAYHGS 80
Cdd:cd05598   1 SMFEKIKTIGVGAFGEVSLVRKKDTNALYAMKTlrkkdvlkrnqvahVKAERD-----------ILAEADNEWVVKLYYS 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   81 YLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA 160
Cdd:cd05598  70 FQDKENLYFVMDYIPGGDLMSLLIKKGIFEEDLARFYIAELVCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  161 QIGAT------LARrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPL 221
Cdd:cd05598 150 GFRWThdskyyLAH--SLVGTPNYIAPE---VLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPA 211
STKc_GRK1 cd05608
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs ...
23-262 1.78e-18

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270759 [Multi-domain]  Cd Length: 288  Bit Score: 86.86  E-value: 1.78e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMV-----KMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLWICMEFCGAG 97
Cdd:cd05608   9 LGKGGFGEVSACQMRATGKLYACKKLnkkrlKKRKGYEGAMVEKRILAKVHSRFIVSLAY--AFQTKTDLCLVMTIMNGG 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQ-DIYQV---TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd05608  87 DLRyHIYNVdeeNPGFQEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDDDGNVRISDLGLAVELKDGQTKTKGYA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIK 252
Cdd:cd05608 167 GTPGFMAPEL----LLGeEYDYSVDYFTLGVTLYEMIAARGP-FRARGEKVENKELKQRILNDSVTYSEKFSPASKSICE 241
                       250
                ....*....|
gi 6005810  253 VTLTKSPKKR 262
Cdd:cd05608 242 ALLAKDPEKR 251
STKc_TGFbR-like cd13998
Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; ...
24-229 2.08e-18

Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. There are two types of TGFbeta receptors included in this subfamily, I and II, that play different roles in signaling. For signaling to occur, the ligand first binds to the high-affinity type II receptor, which is followed by the recruitment of the low-affinity type I receptor to the complex and its activation through trans-phosphorylation by the type II receptor. The active type I receptor kinase starts intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. Different ligands interact with various combinations of types I and II receptors to elicit a specific signaling pathway. Activins primarily signal through combinations of ACVR1b/ALK7 and ACVR2a/b; myostatin and GDF11 through TGFbR1/ALK4 and ACVR2a/b; BMPs through ACVR1/ALK1 and BMPR2; and TGFbeta through TGFbR1 and TGFbR2. The TGFbR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270900 [Multi-domain]  Cd Length: 289  Bit Score: 86.34  E-value: 2.08e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   24 GGGTYGEVFKArdKVSGDLVAlkmVKMEPDDDVSTLQKEILILKT--CRHANIVAY-----HGSYLWLQkLWICMEFCGA 96
Cdd:cd13998   4 GKGRFGEVWKA--SLKNEPVA---VKIFSSRDKQSWFREKEIYRTpmLKHENILQFiaadeRDTALRTE-LWLVTAFHPN 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDiYQVTGSLSELQISYVCREVLQGLAYLHS------QKK---IHRDIKGANILINDAGEVRLADFGISAQIGATLA 167
Cdd:cd13998  78 GSL*D-YLSLHTIDWVSLCRLALSVARGLAHLHSeipgctQGKpaiAHRDLKSKNILVKNDGTCCIADFGLAVRLSPSTG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 R----RLSFIGTPYWMAPEVaavaLKGGYNELC-------DIWSLGITAIELA-----------ELQPPLFDV---HP-- 220
Cdd:cd13998 157 EednaNNGQVGTKRYMAPEV----LEGAINLRDfesfkrvDIYAMGLVLWEMAsrctdlfgiveEYKPPFYSEvpnHPsf 232
                       250
                ....*....|.
gi 6005810  221 --LRVLFLMTK 229
Cdd:cd13998 233 edMQEVVVRDK 243
PTKc_FGFR4 cd05099
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs ...
13-273 2.09e-18

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. FGFR4 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133230 [Multi-domain]  Cd Length: 314  Bit Score: 86.94  E-value: 2.09e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKAR----DKVSGD---LVALKMVKME-PDDDVSTLQKEILILKTC-RHANIVAYHGSYLW 83
Cdd:cd05099  10 PRDRLVLGKPLGEGCFGQVVRAEaygiDKSRPDqtvTVAVKMLKDNaTDKDLADLISEMELMKLIgKHKNIINLLGVCTQ 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAGSLQ------------DIYQVTgSLSELQISY-----VCREVLQGLAYLHSQKKIHRDIKGANILIN 146
Cdd:cd05099  90 EGPLYVIVEYAAKGNLReflrarrppgpdYTFDIT-KVPEEQLSFkdlvsCAYQVARGMEYLESRRCIHRDLAARNVLVT 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  147 DAGEVRLADFGISAQI------GATLARRLSFigtpYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHP 220
Cdd:cd05099 169 EDNVMKIADFGLARGVhdidyyKKTSNGRLPV----KWMAPE---ALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  221 LRVLFLMTKSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSaTKMLSHQL 273
Cdd:cd05099 242 VEELFKLLREGH---RMDKPSNCTHELYMLMRECWHAVPTQRPT-FKQLVEAL 290
STKc_MASTL cd05610
Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like ...
26-275 2.12e-18

Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase (also called greatwall kinase); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. MASTL, also called greatwall kinase (Gwl), is involved in the regulation of mitotic entry, which is controlled by the coordinated activities of protein kinases and opposing protein phosphatases (PPs). The cyclin B/CDK1 complex induces entry into M-phase while PP2A-B55 shows anti-mitotic activity. MASTL/Gwl is activated downstream of cyclin B/CDK1 and indirectly inhibits PP2A-B55 by phosphorylating the small protein alpha-endosulfine (Ensa) or the cAMP-regulated phosphoprotein 19 (Arpp19), resulting in M-phase progression. Gwl kinase may also play roles in mRNA stabilization and DNA checkpoint recovery. The human MASTL gene has also been named FLJ14813; a missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. The MASTL kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270761 [Multi-domain]  Cd Length: 349  Bit Score: 87.63  E-value: 2.12e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDI 102
Cdd:cd05610  15 GAFGKVYLGRKKNNSKLYAVKVVKkadMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSL 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS----------------------- 159
Cdd:cd05610  95 LHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSkvtlnrelnmmdilttpsmakpk 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 -------AQIgATLARRLSF------------------------IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05610 175 ndysrtpGQV-LSLISSLGFntptpyrtpksvrrgaarvegeriLGTPDYLAPE---LLLGKPHGPAVDWWALGVCLFEF 250
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  209 AELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd05610 251 LTGIPPFNDETPQQVFQNILNRDIPWPEGEE--ELSVNAQNAIEILLTMDPTKRAGLKELKQHPLFH 315
STKc_NDR1 cd05628
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze ...
15-220 2.14e-18

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR1 (also called STK38) plays a role in proper centrosome duplication. It is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to also act as a tumor suppressor. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270777 [Multi-domain]  Cd Length: 376  Bit Score: 88.17  E-value: 2.14e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05628   1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRkadMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI------------- 158
Cdd:cd05628  81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLctglkkahrtefy 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 --------------------SAQIGATLARRLSF--IGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05628 161 rnlnhslpsdftfqnmnskrKAETWKRNRRQLAFstVGTPDYIAPE---VFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237

                ....
gi 6005810  217 DVHP 220
Cdd:cd05628 238 SETP 241
STKc_Kalirin_C cd14115
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
23-271 2.39e-18

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Kalirin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kalirin, also called Duo or Duet, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. As a GEF, it activates Rac1, RhoA, and RhoG. It is highly expressed in neurons and is required for spine formation. The kalirin gene produces at least 10 isoforms from alternative promoter use and splicing. Of the major isoforms (Kalirin-7, -9, and -12), only kalirin-12 contains the C-terminal kinase domain. Kalirin-12 is highly expressed during embryonic development and it plays an important role in axon outgrowth. The Kalirin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271017 [Multi-domain]  Cd Length: 248  Bit Score: 85.40  E-value: 2.39e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVStlqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14115   1 IGRGRFSIVKKCLHKATRKDVAVKFVskKMKKKEQAA---HEAALLQHLQHPQYITLHDTYESPTSYILVLELMDDGRLL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN---DAGEVRLADFGISAQIgaTLARRLS-FIGTP 176
Cdd:cd14115  78 DYLMNHDELMEEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDlriPVPRVKLIDLEDAVQI--SGHRHVHhLLGNP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVaavaLKGGYNEL-CDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRlKEKGKWSAAFHNFIKVTL 255
Cdd:cd14115 156 EFAAPEV----IQGTPVSLaTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPD-EYFGDVSQAARDFINVIL 230
                       250
                ....*....|....*.
gi 6005810  256 TKSPKKRPSATKMLSH 271
Cdd:cd14115 231 QEDPRRRPTAATCLQH 246
STKc_Titin cd14104
Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the ...
17-282 2.79e-18

Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Titin, also called connectin, is a muscle-specific elastic protein and is the largest known protein to date. It contains multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains, and a single kinase domain near the C-terminus. It spans half of the sarcomere, the repeating contractile unit of striated muscle, and performs mechanical and catalytic functions. Titin contributes to the passive force generated when muscle is stretched during relaxation. Its kinase domain phosphorylates and regulates the muscle protein telethonin, which is required for sarcomere formation in differentiating myocytes. In addition, titin binds many sarcomere proteins and acts as a molecular scaffold for filament formation during myofibrillogenesis. The Titin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271006 [Multi-domain]  Cd Length: 277  Bit Score: 86.07  E-value: 2.79e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVsTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCga 96
Cdd:cd14104   2 YMIAEELGRGQFGIVHRCVETSSKKTYMAKFVKVKGADQV-LVKKEISILNIARHRNILRLHESFESHEELVMIFEFI-- 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 gSLQDIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL--INDAGEVRLADFGISAQIGATLARRL 170
Cdd:cd14104  79 -SGVDIFERITTarfeLNEREIVSYVRQVCEALEFLHSKNIGHFDIRPENIIycTRRGSYIKIIEFGQSRQLKPGDKFRL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIgTPYWMAPEVAAVALKGgynELCDIWSLG-ITAIELAELQPplfdvhplrvlfLMTKSGYQPPRLKEKGKWS---AA 246
Cdd:cd14104 158 QYT-SAEFYAPEVHQHESVS---TATDMWSLGcLVYVLLSGINP------------FEAETNQQTIENIRNAEYAfddEA 221
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 6005810  247 FHN-------FIKVTLTKSPKKRPSATKMLSHqlvsqPGLNRG 282
Cdd:cd14104 222 FKNisiealdFVDRLLVKERKSRMTAQEALNH-----PWLKQG 259
STKc_SGK cd05575
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; ...
23-262 4.93e-18

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270727 [Multi-domain]  Cd Length: 323  Bit Score: 86.22  E-value: 4.93e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKmvkmepdddvsTLQKEIL---------------ILKTCRHANIVAYHGSYLWLQKL 87
Cdd:cd05575   3 IGKGSFGKVLLARHKAEGKLYAVK-----------VLQKKAIlkrnevkhimaernvLLKNVKHPFLVGLHYSFQTKDKL 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI---SAQIGA 164
Cdd:cd05575  72 YFVLDYVNGGELFFHLQRERHFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLckeGIEPSD 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLArrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLF--DVHPL--RVLflmtksgYQPPRLKEk 240
Cdd:cd05575 152 TTS---TFCGTPEYLAPE---VLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYsrDTAEMydNIL-------HKPLRLRT- 217
                       250       260
                ....*....|....*....|..
gi 6005810  241 gKWSAAFHNFIKVTLTKSPKKR 262
Cdd:cd05575 218 -NVSPSARDLLEGLLQKDRTKR 238
STKc_ACVR1_ALK1 cd14142
Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin ...
16-220 5.53e-18

Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR1, also called Activin receptor-Like Kinase 2 (ALK2), and ALK1 act as receptors for bone morphogenetic proteins (BMPs) and they activate SMAD1/5/8. ACVR1 is widely expressed while ALK1 is limited mainly to endothelial cells. The specificity of BMP binding to type I receptors is affected by type II receptors. ACVR1 binds BMP6/7/9/10 and can also bind anti-Mullerian hormone (AMH) in the presence of AMHR2. ALK1 binds BMP9/10 as well as TGFbeta in endothelial cells. A missense mutation in the GS domain of ACVR1 causes fibrodysplasia ossificans progressiva, a complex and disabling disease characterized by congenital skeletal malformations and extraskeletal bone formation. ACVR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like ACVR1 and ALK1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The ACVR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271044 [Multi-domain]  Cd Length: 298  Bit Score: 85.57  E-value: 5.53e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARdkVSGDLVAlkmVKMEPDDDVSTLQKEILILKTC--RHANIVAYHGSYLWLQK----LWI 89
Cdd:cd14142   6 QITLVECIGKGRYGEVWRGQ--WQGESVA---VKIFSSRDEKSWFRETEIYNTVllRHENILGFIASDMTSRNsctqLWL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTgSLSELQISYVCREVLQGLAYLHS-----QKK---IHRDIKGANILINDAGEVRLADFGI--- 158
Cdd:cd14142  81 ITHYHENGSLYDYLQRT-TLDHQEMLRLALSAASGLVHLHTeifgtQGKpaiAHRDLKSKNILVKSNGQCCIADLGLavt 159
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  159 ----SAQIGATLARRlsfIGTPYWMAPEVAAVALKGGYNEL---CDIWSLGITAIELA----------ELQPPLFDVHP 220
Cdd:cd14142 160 hsqeTNQLDVGNNPR---VGTKRYMAPEVLDETINTDCFESykrVDIYAFGLVLWEVArrcvsggiveEYKPPFYDVVP 235
STKc_MLK3 cd14147
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the ...
19-225 5.76e-18

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK3 is a mitogen-activated protein kinase kinase kinases (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK3 activates multiple MAPK pathways and plays a role in apoptosis, proliferation, migration, and differentiation, depending on the cellular context. It is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. MLK3 also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and consequently, it also impacts inflammation and immunity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271049 [Multi-domain]  Cd Length: 267  Bit Score: 84.70  E-value: 5.76e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFkaRDKVSGDLVALKMVKMEPDDDVS----TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14147   7 LEEVIGIGGFGKVY--RGSWRGELVAVKAARQDPDEDISvtaeSVRQEARLFAMLAHPNIIALKAVCLEEPNLCLVMEYA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCrEVLQGLAYLHSQK---KIHRDIKGANILINDAGE--------VRLADFGISAQIG 163
Cdd:cd14147  85 AGGPLSRALAGRRVPPHVLVNWAV-QIARGMHYLHCEAlvpVIHRDLKSNNILLLQPIEnddmehktLKITDFGLAREWH 163
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  164 ATlaRRLSFIGTPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF 225
Cdd:cd14147 164 KT--TQMSAAGTYAWMAPEVIKAST---FSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAY 220
STKc_Mnk2 cd14173
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
15-274 7.41e-18

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271075 [Multi-domain]  Cd Length: 288  Bit Score: 84.69  E-value: 7.41e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQR-LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWICME 92
Cdd:cd14173   1 DVYQLQEEvLGEGAYARVQTCINLITNKEYAVKIIEKRPGHSRSRVFREVEMLYQCQgHRNVLELIEFFEEEDKFYLVFE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 -FCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAqiGATLAR 168
Cdd:cd14173  81 kMRGGSILSHIHR-RRHFNELEASVVVQDIASALDFLHNKGIAHRDLKPENILCehpNQVSPVKICDFDLGS--GIKLNS 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTP---------YWMAPEVAAVALKGG--YNELCDIWSLGITAIELAELQPPLF------------DVHPL--RV 223
Cdd:cd14173 158 DCSPISTPelltpcgsaEYMAPEVVEAFNEEAsiYDKRCDLWSLGVILYIMLSGYPPFVgrcgsdcgwdrgEACPAcqNM 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  224 LFLMTKSG-YQPPRlKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14173 238 LFESIQEGkYEFPE-KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 288
STKc_JNK cd07850
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the ...
17-202 7.67e-18

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270840 [Multi-domain]  Cd Length: 337  Bit Score: 85.54  E-value: 7.67e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKmvKM-EPDDDVSTLQK---EILILKTCRHANIVAY------HGSYLWLQK 86
Cdd:cd07850   2 YQNLKPIGSGAQGIVCAAYDTVTGQNVAIK--KLsRPFQNVTHAKRayrELVLMKLVNHKNIIGLlnvftpQKSLEEFQD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsAQIGATL 166
Cdd:cd07850  80 VYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTS 155
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 6005810  167 ARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLG 202
Cdd:cd07850 156 FMMTPYVVTRYYRAPE---VILGMGYKENVDIWSVG 188
PTKc_InsR cd05061
Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor; PTKs catalyze the transfer ...
13-264 8.08e-18

Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor PTK (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. The InsR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133192 [Multi-domain]  Cd Length: 288  Bit Score: 84.64  E-value: 8.08e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFK--ARDKVSGDL---VALKMVkmepdDDVSTLQKEILILK--------TCRHanIVAYHG 79
Cdd:cd05061   4 SREKITLLRELGQGSFGMVYEgnARDIIKGEAetrVAVKTV-----NESASLRERIEFLNeasvmkgfTCHH--VVRLLG 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   80 SYLWLQKLWICMEFCGAGSLQDIYQVTGSLSE----------LQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG 149
Cdd:cd05061  77 VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEnnpgrppptlQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  150 EVRLADFGISAQIGATLARRLSFIG-TPY-WMAPEvaavALKGG-YNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLF 225
Cdd:cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGlLPVrWMAPE----SLKDGvFTTSSDMWSFGVVLWEITSLaEQPYQGLSNEQVLK 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 6005810  226 LMTKSGY--QPPRLKEKgkwsaaFHNFIKVTLTKSPKKRPS 264
Cdd:cd05061 233 FVMDGGYldQPDNCPER------VTDLMRMCWQFNPKMRPT 267
PTKc_FAK cd05056
Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the ...
14-182 8.13e-18

Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) PTK that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. The FAK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133187 [Multi-domain]  Cd Length: 270  Bit Score: 84.40  E-value: 8.13e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKA------RDKVSgdlVALKMVKMEPDDDVSTL-QKEILILKTCRHANIVAYHGsYLWLQK 86
Cdd:cd05056   5 REDITLGRCIGEGQFGDVYQGvymspeNEKIA---VAVKTCKNCTSPSVREKfLQEAYIMRQFDHPHIVKLIG-VITENP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd05056  81 VWIVMELAPLGELRSYLQVnKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYMEDE 160
                       170
                ....*....|....*...
gi 6005810  166 LARRLSFIGTPY-WMAPE 182
Cdd:cd05056 161 SYYKASKGKLPIkWMAPE 178
STKc_WNK3 cd14031
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 3; STKs catalyze ...
23-276 9.05e-18

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK3 shows a restricted expression pattern; it is found at high levels in the pituary glands and is also expressed in the kidney and brain. It has been shown to regulate many ion transporters including members of the SLC12A family of cation-chloride cotransporters such as NCC and NKCC2, the renal potassium channel ROMK, and the epithelial calcium channels TRPV5 and TRPV6. WNK3 appears to sense low-chloride hypotonic stress and under these conditions, it activates SPAK, which directly interacts and phosphorylates cation-chloride cotransporters. WNK3 has also been shown to promote cell survival, possibly through interaction with procaspase-3 and HSP70. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. The WNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270933 [Multi-domain]  Cd Length: 275  Bit Score: 84.39  E-value: 9.05e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVAL------KMVKMEPdddvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM----E 92
Cdd:cd14031  18 LGRGAFKTVYKGLDTETWVEVAWcelqdrKLTKAEQ----QRFKEEAEMLKGLQHPNIVRFYDSWESVLKGKKCIvlvtE 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILIND-AGEVRLADFGISAQIGATLARr 169
Cdd:cd14031  94 LMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLQFLHTRTPpiIHRDLKCDNIFITGpTGSVKIGDLGLATLMRTSFAK- 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 lSFIGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQP--------PRLKEkg 241
Cdd:cd14031 173 -SVIGTPEFMAPEM----YEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGIKPasfnkvtdPEVKE-- 245
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  242 kwsaafhnFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14031 246 --------IIEGCIRQNKSERLSIKDLLNHAFFAE 272
STKc_PKN cd05589
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer ...
23-208 9.57e-18

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270741 [Multi-domain]  Cd Length: 326  Bit Score: 85.04  E-value: 9.57e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKmEPD----DDVSTLQKEILILKTC---RHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05589   7 LGRGHFGKVLLAEYKPTGELFAIKALK-KGDiiarDEVESLMCEKRIFETVnsaRHPFLVNLFACFQTPEHVCFVMEYAA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSL-----QDIYqvtgslSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQiGATLARRL 170
Cdd:cd05589  86 GGDLmmhihEDVF------SEPRAVFYAACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKE-GMGFGDRT 158
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 6005810  171 S-FIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIEL 208
Cdd:cd05589 159 StFCGTPEFLAPEVLT---DTSYTRAVDWWGLGVLIYEM 194
STKc_MLCK2 cd14190
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze ...
23-271 9.91e-18

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK2 (or MYLK2) phosphorylates myosin regulatory light chain and controls the contraction of skeletal muscles. MLCK2 contains a single kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site. The MLCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271092 [Multi-domain]  Cd Length: 261  Bit Score: 83.82  E-value: 9.91e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL-QD 101
Cdd:cd14190  12 LGGGKFGKVHTCTEKRTGLKLAAKVINKQNSKDKEMVLLEIQVMNQLNHRNLIQLYEAIETPNEIVLFMEYVEGGELfER 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAG-EVRLADFGISAQIGATLARRLSFiGTPYWM 179
Cdd:cd14190  92 IVDEDYHLTEVDAMVFVRQICEGIQFMHQMRVLHLDLKPENILcVNRTGhQVKIIDFGLARRYNPREKLKVNF-GTPEFL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  180 APEVAavalkgGYNEL---CDIWSLG-ITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgKWSAAFHNFIKVTL 255
Cdd:cd14190 171 SPEVV------NYDQVsfpTDMWSMGvITYMLLSGLSPFLGDDDTETLNNVLMGNWYFDEETFE--HVSDEAKDFVSNLI 242
                       250
                ....*....|....*.
gi 6005810  256 TKSPKKRPSATKMLSH 271
Cdd:cd14190 243 IKERSARMSATQCLKH 258
STKc_aPKC_zeta cd05617
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze ...
17-218 1.04e-17

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC-zeta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270768 [Multi-domain]  Cd Length: 357  Bit Score: 85.84  E-value: 1.04e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd05617  17 FDLIRVIGRGSYAKVLLVRLKKNDQIYAMKVVKKElvhDDEDIDWVQTEKHVFeQASSNPFLVGLHSCFQTTSRLFLVIE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF 172
Cdd:cd05617  97 YVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTF 176
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  173 IGTPYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDV 218
Cdd:cd05617 177 CGTPNYIAPEI----LRGeEYGFSVDWWALGVLMFEMMAGRSP-FDI 218
STKc_TGFbR_I cd14056
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type ...
22-220 1.04e-17

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of type I receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation through trans-phosphorylation by type II receptors, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. They are inhibited by the immunophilin FKBP12, which is thought to control leaky signaling caused by receptor oligomerization in the absence of ligand. The TGFbR-I subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270958 [Multi-domain]  Cd Length: 287  Bit Score: 84.25  E-value: 1.04e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKARDKvsGDLVAlkmVKMEPDDDVSTLQKEILILKTC--RHANIVAYHGSYLW----LQKLWICMEFCG 95
Cdd:cd14056   2 TIGKGRYGEVWLGKYR--GEKVA---VKIFSSRDEDSWFRETEIYQTVmlRHENILGFIAADIKstgsWTQLWLITEYHE 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDiYQVTGSLSELQISYVCREVLQGLAYLH-----SQKK---IHRDIKGANILINDAGEVRLADFGI----SAQIG 163
Cdd:cd14056  77 HGSLYD-YLQRNTLDTEEALRLAYSAASGLAHLHteivgTQGKpaiAHRDLKSKNILVKRDGTCCIADLGLavryDSDTN 155
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  164 ATLARRLSFIGTPYWMAPEVaavaLKGGYNELC-------DIWSLGITAIELA----------ELQPPLFDVHP 220
Cdd:cd14056 156 TIDIPPNPRVGTKRYMAPEV----LDDSINPKSfesfkmaDIYSFGLVLWEIArrceiggiaeEYQLPYFGMVP 225
STKc_MLCK1 cd14191
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze ...
14-217 1.15e-17

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK1 (or MYLK1) phosphorylates myosin regulatory light chain and controls the contraction of smooth muscles. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module which results in the expression of telokin in phasic smooth muscles, leading to Ca2+ desensitization by cyclic nucleotides of smooth muscle force. MLCK1 is also responsible for myosin regulatory light chain phosphorylation in nonmuscle cells and may play a role in regulating myosin II ATPase activity. The MLCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271093 [Multi-domain]  Cd Length: 259  Bit Score: 83.52  E-value: 1.15e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14191   1 SDFYDIEERLGSGKFGQVFRLVEKKTKKVWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL-INDAG-EVRLADFGISAQIGATLARRL 170
Cdd:cd14191  81 VSGGELFErIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMcVNKTGtKIKLIDFGLARRLENAGSLKV 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  171 SFiGTPYWMAPEVAAVAlKGGYNelCDIWSLG-ITAIELAELQPPLFD 217
Cdd:cd14191 161 LF-GTPEFVAPEVINYE-PIGYA--TDMWSIGvICYILVSGLSPFMGD 204
PKc_CLK cd14134
Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity ...
17-255 1.31e-17

Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on S/T residues. In Drosophila, the CLK homolog DOA (Darkener of apricot) is essential for embryogenesis and its mutation leads to defects in sexual differentiation, eye formation, and neuronal development. In fission yeast, the CLK homolog Lkh1 is a negative regulator of filamentous growth and asexual flocculation, and is also involved in oxidative stress response. Vertebrates contain mutliple CLK proteins and mammals have four (CLK1-4). The CLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271036 [Multi-domain]  Cd Length: 332  Bit Score: 84.92  E-value: 1.31e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD--DDVSTlqkEILILKTCRH------ANIVAYHGSYLWLQKLW 88
Cdd:cd14134  14 YKILRLLGEGTFGKVLECWDRKRKRYVAVKIIRNVEKyrEAAKI---EIDVLETLAEkdpngkSHCVQLRDWFDYRGHMC 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAgSLQDI-----YQ-VTGSlselQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG------------- 149
Cdd:cd14134  91 IVFELLGP-SLYDFlkknnYGpFPLE----HVQHIAKQLLEAVAFLHDLKLTHTDLKPENILLVDSDyvkvynpkkkrqi 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  150 ------EVRLADFGisaqiGATLAR--RLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELA--ELqppLFDVH 219
Cdd:cd14134 166 rvpkstDIKLIDFG-----SATFDDeyHSSIVSTRHYRAPE---VILGLGWSYPCDVWSIGCILVELYtgEL---LFQTH 234
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  220 P-LRVLFLMTKS-GYQPPRLKEKGKWSAAFHNFIKVTL 255
Cdd:cd14134 235 DnLEHLAMMERIlGPLPKRMIRRAKKGAKYFYFYHGRL 272
STKc_NIK cd13991
Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs ...
16-268 1.34e-17

Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIK, also called mitogen activated protein kinase kinase kinase 14 (MAP3K14), phosphorylates and activates Inhibitor of NF-KappaB Kinase (IKK) alpha, which is a regulator of NF-kB proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. NIK is essential in the IKKalpha-mediated non-canonical NF-kB signaling pathway, in which IKKalpha processes the IkB-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus where it regulates gene transcription. NIK also plays an important role in Toll-like receptor 7/9 signaling cascades. The NIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270893 [Multi-domain]  Cd Length: 268  Bit Score: 83.71  E-value: 1.34e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQ-RLGGGTYGEVFKARDKVSGDLVALKMVKMEpdddvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd13991   6 HWATHQlRIGRGSFGEVHRMEDKQTGFQCAVKKVRLE-----VFRAEELMACAGLTSPRVVPLYGAVREGPWVNIFMDLK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG-EVRLADFGISAQI-----GATLAR 168
Cdd:cd13991  81 EGGSLGQLIKEQGCLPEDRALHYLGQALEGLEYLHSRKILHGDVKADNVLLSSDGsDAFLCDFGHAECLdpdglGKSLFT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  169 RLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELaelqppLFDVHPLRVLF---LMTKSGYQPPRLKEKGKWSA 245
Cdd:cd13991 161 GDYIPGTETHMAPE---VVLGKPCDAKVDVWSSCCMMLHM------LNGCHPWTQYYsgpLCLKIANEPPPLREIPPSCA 231
                       250       260
                ....*....|....*....|....
gi 6005810  246 AF-HNFIKVTLTKSPKKRPSATKM 268
Cdd:cd13991 232 PLtAQAIQAGLRKEPVHRASAAEL 255
PTKc_Jak1_rpt2 cd05079
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the ...
23-208 1.35e-17

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173644 [Multi-domain]  Cd Length: 284  Bit Score: 83.83  E-value: 1.35e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEV----FKARDKVSGDLVALKMVKMEP-DDDVSTLQKEILILKTCRHANIVAYHGsylwlqklwIC------- 90
Cdd:cd05079  12 LGEGHFGKVelcrYDPEGDNTGEQVAVKSLKPESgGNHIADLKKEIEILRNLYHENIVKYKG---------ICtedggng 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 ----MEFCGAGSLQDIYQVTGSLSEL--QISYVCrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd05079  83 ikliMEFLPSGSLKEYLPRNKNKINLkqQLKYAV-QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 -----TLARRLSfigTP-YWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05079 162 dkeyyTVKDDLD---SPvFWYAPE---CLIQSKFYIASDVWSFGVTLYEL 205
STKc_SNRK cd14074
Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the ...
17-271 1.44e-17

Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNRK is a kinase highly expressed in testis and brain that is found inactive in cells that lack the LKB1 tumour suppressor protein kinase. The regulatory subunits STRAD and MO25 are required for LKB1 to activate SNRK. The SNRK mRNA is increased 3-fold when granule neurons are cultured in low potassium, and may thus play a role in the survival responses in these cells. In some vertebrates, a second SNRK gene (snrkb or snrk-1) has been sequenced and/or identified. Snrk-1 is expressed specifically in embryonic zebrafish vasculature; it plays an essential role in angioblast differentiation, maintenance, and migration. The SNRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270976 [Multi-domain]  Cd Length: 258  Bit Score: 83.23  E-value: 1.44e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVST--LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14074   5 YDLEETLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDDVSKahLFQEVRCMKLVQHPNVVRLYEVIDTQTKLYLILELG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-NDAGEVRLADFGISAQI--GATLArrl 170
Cdd:cd14074  85 DGGDMYDyIMKHENGLNEDLARKYFRQIVSAISYCHKLHVVHRDLKPENVVFfEKQGLVKLTDFGFSNKFqpGEKLE--- 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEvaaVALKGGYNE-LCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQ-PPRLKEKGKwsaafh 248
Cdd:cd14074 162 TSCGSLAYSAPE---ILLGDEYDApAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTvPAHVSPECK------ 232
                       250       260
                ....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14074 233 DLIRRMLIRDPKKRASLEEIENH 255
STKc_YPK1_like cd05585
Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the ...
23-217 1.69e-17

Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270737 [Multi-domain]  Cd Length: 313  Bit Score: 84.16  E-value: 1.69e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSL 99
Cdd:cd05585   2 IGKGSFGKVMQVRKKDTSRIYALKTIRkahIVSRSEVTHTLAERTVLAQVDCPFIVPLKFSFQSPEKLYLVLAFINGGEL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  100 QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPYWM 179
Cdd:cd05585  82 FHHLQREGRFDLSRARFYTAELLCALECLHKFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL 161
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 6005810  180 APEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFD 217
Cdd:cd05585 162 APE---LLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 196
STKc_MSK2_C cd14180
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
16-203 1.71e-17

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271082 [Multi-domain]  Cd Length: 309  Bit Score: 84.15  E-value: 1.71e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQR---LGGGTYGEVFKARDKVSGDLVALKMV--KMEpdddvSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWI 89
Cdd:cd14180   4 CYELDLEepaLGEGSFSVCRKCRHRQSGQEYAVKIIsrRME-----ANTQREVAALRLCQsHPNIVALHEVLHDQYHTYL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQIGATL 166
Cdd:cd14180  79 VMELLRGGELLDRIKKKARFSESEASQLMRSLVSAVSFMHEAGVVHRDLKPENILYADESDgavLKVIDFGFARLRPQGS 158
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 6005810  167 ARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGI 203
Cdd:cd14180 159 RPLQTPCFTLQYAAPELFS---NQGYDESCDLWSLGV 192
STKc_DCKL2 cd14184
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called ...
15-217 1.85e-17

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called Doublecortin-like and CAM kinase-like 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL2 (or DCAMKL2) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL2 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL2 has been shown to interact with tubulin, JIP1/2, JNK, neurabin 2, and actin. It is associated with the terminal segments of axons and dendrites, and may function as a phosphorylation-dependent switch to control microtubule dynamics in neuronal growth cones. The DCKL2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271086 [Multi-domain]  Cd Length: 259  Bit Score: 83.16  E-value: 1.85e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14184   1 EKYKIGKVIGDGNFAVVKECVERSTGKEFALKIIdKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMDTPAELYLVMEL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQIGATLarr 169
Cdd:cd14184  81 VKGGDLFDAITSSTKYTERDASAMVYNLASALKYLHGLCIVHRDIKPENLLVceypDGTKSLKLGDFGLATVVEGPL--- 157
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLG-ITAIELA---------ELQPPLFD 217
Cdd:cd14184 158 YTVCGTPTYVAPEIIA---ETGYGLKVDIWAAGvITYILLCgfppfrsenNLQEDLFD 212
STKc_MAPKAPK2 cd14170
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
21-276 2.23e-17

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 2 (MAPKAP2 or MK2) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK2 is a bonafide substrate for the MAPK p38. It is closely related to MK3 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. The MK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271072 [Multi-domain]  Cd Length: 303  Bit Score: 83.93  E-value: 2.23e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKmepddDVSTLQKEILI---LKTCRH-ANIV-AYHGSYLWLQKLWICMEFCG 95
Cdd:cd14170   8 QVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKARREVELhwrASQCPHiVRIVdVYENLYAGRKCLLIVMECLD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTG--SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDA---GEVRLADFGISAQIgATLARRL 170
Cdd:cd14170  83 GGELFSRIQDRGdqAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKrpnAILKLTDFGFAKET-TSHNSLT 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTK----SGYQPPRlKEKGKWSAA 246
Cdd:cd14170 162 TPCYTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTrirmGQYEFPN-PEWSEVSEE 237
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14170 238 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 267
PTKc_Lyn cd05072
Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the ...
13-264 2.37e-17

Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lyn subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270657 [Multi-domain]  Cd Length: 272  Bit Score: 83.17  E-value: 2.37e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVKmePDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05072   5 PRESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLK--PGTmSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIY--QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLA 167
Cdd:cd05072  82 EYMAKGSLLDFLksDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIedNEYTA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRlsfiGTPY---WMAPEVAAValkGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMTKsGYQPPRLKekgKW 243
Cdd:cd05072 162 RE----GAKFpikWTAPEAINF---GSFTIKSDVWSFGILLYEIVTYgKIPYPGMSNSDVMSALQR-GYRMPRME---NC 230
                       250       260
                ....*....|....*....|.
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05072 231 PDELYDIMKTCWKEKAEERPT 251
PTKc_Fer cd05085
Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; ...
23-203 2.46e-17

Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells.


Pssm-ID: 270668 [Multi-domain]  Cd Length: 251  Bit Score: 82.36  E-value: 2.46e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA--RDKVSgdlVALKMVKME-PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS- 98
Cdd:cd05085   4 LGKGNFGEVYKGtlKDKTP---VAVKTCKEDlPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDf 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPY- 177
Cdd:cd05085  81 LSFLRKKKDELKTKQLVKFSLDAAAGMAYLESKNCIHRDLAARNCLVGENNALKISDFGMSRQEDDGVYSSSGLKQIPIk 160
                       170       180
                ....*....|....*....|....*..
gi 6005810  178 WMAPEvaavALK-GGYNELCDIWSLGI 203
Cdd:cd05085 161 WTAPE----ALNyGRYSSESDVWSFGI 183
STKc_p38beta cd07878
Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase ...
15-208 2.72e-17

Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase (also called MAPK11); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38beta/MAPK11 is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143383 [Multi-domain]  Cd Length: 343  Bit Score: 84.33  E-value: 2.72e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCRHANIVAY------HGSYLWLQK 86
Cdd:cd07878  15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRtyRELRLLKHMKHENVIGLldvftpATSIENFNE 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAgSLQDIYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd07878  95 VYLVTNLMGA-DLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEM 172
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  167 ArrlSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIEL 208
Cdd:cd07878 173 T---GYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMAEL 209
STKc_MAPKAPK cd14089
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated ...
21-271 3.09e-17

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPK-activated protein kinases MK2, MK3, MK5 (also called PRAK for p38-regulated/activated protein kinase), and related proteins. These proteins contain a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. In addition, MK2 and MK3 contain an N-terminal proline-rich region that can bind to SH3 domains. MK2 and MK3 are bonafide substrates for the MAPK p38, while MK5 plays a functional role in the p38 MAPK pathway although their direct interaction has been difficult to detect. MK2 and MK3 are closely related and show, thus far, indistinguishable substrate specificity, while MK5 shows a distinct spectrum of substrates. MK2 and MK3 are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270991 [Multi-domain]  Cd Length: 263  Bit Score: 82.34  E-value: 3.09e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKmepddDVSTLQKEI-LILKTCRHANIVA----YHGSYLWLQKLWICMEFCG 95
Cdd:cd14089   7 QVLGLGINGKVLECFHKKTGEKFALKVLR-----DNPKARREVeLHWRASGCPHIVRiidvYENTYQGRKCLLVVMECME 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGISAQIGATLARRl 170
Cdd:cd14089  82 GGELFSRIQERADsaFTEREAAEIMRQIGSAVAHLHSMNIAHRDLKPENLLYSSKGPnaiLKLTDFGFAKETTTKKSLQ- 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAavalkgG---YNELCDIWSLG-ITAIELAELqPPLFDVHPLRVLFLMTK---SG-YQPPRlKEKGK 242
Cdd:cd14089 161 TPCYTPYYVAPEVL------GpekYDKSCDMWSLGvIMYILLCGY-PPFYSNHGLAISPGMKKrirNGqYEFPN-PEWSN 232
                       250       260
                ....*....|....*....|....*....
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14089 233 VSEEAKDLIRGLLKTDPSERLTIEEVMNH 261
PTKc_FGFR2 cd05101
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs ...
13-269 3.29e-17

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. FGFR2 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270679 [Multi-domain]  Cd Length: 313  Bit Score: 83.53  E-value: 3.29e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKA------RDKVSGDL-VALKMVKMEP-DDDVSTLQKEILILKTC-RHANIVAYHGSYLW 83
Cdd:cd05101  22 PRDKLTLGKPLGEGCFGQVVMAeavgidKDKPKEAVtVAVKMLKDDAtEKDLSDLVSEMEMMKMIgKHKNIINLLGACTQ 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAGSLQDI------------YQVTgSLSELQISY-----VCREVLQGLAYLHSQKKIHRDIKGANILIN 146
Cdd:cd05101 102 DGPLYVIVEYASKGNLREYlrarrppgmeysYDIN-RVPEEQMTFkdlvsCTYQLARGMEYLASQKCIHRDLAARNVLVT 180
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  147 DAGEVRLADFGISAQIG------ATLARRLSFigtpYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHP 220
Cdd:cd05101 181 ENNVMKIADFGLARDINnidyykKTTNGRLPV----KWMAPE---ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 253
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  221 LRVLFLMTKSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05101 254 VEELFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
STKc_RCK1-like cd14096
Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
17-217 3.69e-17

Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal STKs including Saccharomyces cerevisiae RCK1 and RCK2, Schizosaccharomyces pombe Sty1-regulated kinase 1 (Srk1), and similar proteins. RCK1, RCK2 (or Rck2p), and Srk1 are MAPK-activated protein kinases. RCK1 and RCK2 are involved in oxidative and metal stress resistance in budding yeast. RCK2 also regulates rapamycin sensitivity in both S. cerevisiae and Candida albicans. Srk1 is activated by Sty1/Spc1 and is involved in negatively regulating cell cycle progression by inhibiting Cdc25. The RCK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270998 [Multi-domain]  Cd Length: 295  Bit Score: 82.87  E-value: 3.69e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARD-KVSGDLVALKMV-KMEPDDD----VSTLQ--KEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd14096   3 YRLINKIGEGAFSNVYKAVPlRNTGKPVAIKVVrKADLSSDnlkgSSRANilKEVQIMKRLSHPNIVKLLDFQESDEYYY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQD-IYQVTgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN--------------------- 146
Cdd:cd14096  83 IVLELADGGEIFHqIVRLT-YFSEDLSRHVITQVASAVKYLHEIGVVHRDIKPENLLFEpipfipsivklrkadddetkv 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  147 DAGE------------VRLADFGISAQIGATLARrlSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd14096 162 DEGEfipgvggggigiVKLADFGLSKQVWDSNTK--TPCGTVGYTAPEVVK---DERYSKKVDMWALGCVLYTLLCGFPP 236

                ...
gi 6005810  215 LFD 217
Cdd:cd14096 237 FYD 239
STKc_TSSK1_2-like cd14165
Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; ...
17-203 3.78e-17

Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK2 is localized in the sperm neck, equatorial segment, and mid-piece of the sperm tail. Both TSSK1 and TSSK2 phosphorylate their common substrate TSKS (testis-specific-kinase-substrate). TSSK1/TSSK2 double knock-out mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271067 [Multi-domain]  Cd Length: 263  Bit Score: 82.14  E-value: 3.78e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVST-LQKEILILKTCRHANIV-------AYHGsylwlqK 86
Cdd:cd14165   3 YILGINLGEGSYAKVKSAYSERLKCNVAIKIIdkKKAPDDFVEKfLPRELEILARLNHKSIIktyeifeTSDG------K 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI---- 162
Cdd:cd14165  77 VYIVMELGVQGDLLEFIKLRGALPEDVARKMFHQLSSAIKYCHELDIVHRDLKCENLLLDKDFNIKLTDFGFSKRClrde 156
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  163 -GATLARRlSFIGTPYWMAPEVaavaLKG-GYN-ELCDIWSLGI 203
Cdd:cd14165 157 nGRIVLSK-TFCGSAAYAAPEV----LQGiPYDpRIYDIWSLGV 195
STKc_RSK4_C cd14177
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called ...
15-275 4.27e-17

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called Ribosomal protein S6 kinase alpha-6 or 90kDa ribosomal protein S6 kinase 6); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK4 is also called S6K-alpha-6, RPS6KA6, p90RSK6 or pp90RSK4. RSK4 is a substrate of ERK and is a modulator of p53-dependent proliferation arrest in human cells. Deletion of the RSK4 gene, RPS6KA6, frequently occurs in patients of X-linked deafness type 3, mental retardation and choroideremia. Studies of RSK4 in cancer cells and tissues suggest that it may be oncogenic or tumor suppressive depending on many factors. RSK4 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271079 [Multi-domain]  Cd Length: 295  Bit Score: 82.76  E-value: 4.27e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVstlqkEILiLKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd14177   4 DVYELKEDIGVGSYSVCKRCIHRATNMEFAVKIIdksKRDPSEEI-----EIL-MRYGQHPNIITLKDVYDDGRYVYLVT 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND----AGEVRLADFGISAQIGATLA 167
Cdd:cd14177  78 ELMKGGELLDRILRQKFFSEREASAVLYTITKTVDYLHCQGVVHRDLKPSNILYMDdsanADSIRICDFGFAKQLRGENG 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLF---DVHPLRVLFLMTKSGYQpprlKEKGKW- 243
Cdd:cd14177 158 LLLTPCYTANFVAPE---VLMRQGYDAACDIWSLGVLLYTMLAGYTPFAngpNDTPEEILLRIGSGKFS----LSGGNWd 230
                       250       260       270
                ....*....|....*....|....*....|....
gi 6005810  244 --SAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14177 231 tvSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIA 264
STKc_TSSK6-like cd14164
Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs ...
17-271 4.35e-17

Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK6, also called SSTK, is expressed at the head of elongated sperm. It can phosphorylate histones and associate with heat shock protens HSP90 and HSC70. Male mice deficient in TSSK6 are infertile, showing spermatogenic impairment including reduced sperm counts, impaired DNA condensation, abnormal morphology and decreased motility rates. The TSSK6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271066 [Multi-domain]  Cd Length: 256  Bit Score: 81.83  E-value: 4.35e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIV-AYHGSYLWLQKLWICME 92
Cdd:cd14164   2 YTLGTTIGEGSFSKVKLATSQKYCCKVAIKIVdrrRASPDFVQKFLPRELSILRRVNHPNIVqMFECIEVANGRLYIVME 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVtGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE-VRLADFGISAQIGATLARRLS 171
Cdd:cd14164  82 AAATDLLQKIQEV-HHIPKDLARDMFAQMVGAVNYLHDMNIVHRDLKCENILLSADDRkIKIADFGFARFVEDYPELSTT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FIGTPYWMAPEvaaVALKGGYN-ELCDIWSLGItaielaelqpplfdvhplrVLFLMTkSGYQP--------PRLKEKG- 241
Cdd:cd14164 161 FCGSRAYTPPE---VILGTPYDpKKYDVWSLGV-------------------VLYVMV-TGTMPfdetnvrrLRLQQRGv 217
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  242 ------KWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14164 218 lypsgvALEEPCRALIRTLLQFNPSTRPSIQQVAGN 253
PKc_YAK1 cd14212
Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze ...
17-261 4.42e-17

Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of proteins with similarity to Saccharomyces cerevisiae YAK1 (or Yak1p), a dual-specificity kinase that autophosphorylates at tyrosine residues and phosphorylates substrates on S/T residues. YAK1 phosphorylates and activates the transcription factors Hsf1 and Msn2, which play important roles in cellular homeostasis during stress conditions including heat shock, oxidative stress, and nutrient deficiency. It also phosphorylates the protein POP2, a component of a complex that regulates transcription, under glucose-deprived conditions. It functions as a part of a glucose-sensing system that is involved in controlling growth in yeast. The YAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271114 [Multi-domain]  Cd Length: 330  Bit Score: 83.45  E-value: 4.42e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPdddvSTLQK---EILILKTCR-------HANIVAYHGSYLWLQK 86
Cdd:cd14212   1 YLVLDLLGQGTFGQVVKCQDLKTNKLVAVKVLKNKP----AYFRQamlEIAILTLLNtkydpedKHHIVRLLDHFMHHGH 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGagslQDIYQVTGS-----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI--NDAGEVRLADFGIS 159
Cdd:cd14212  77 LCIVFELLG----VNLYELLKQnqfrgLSLQLIRKFLQQLLDALSVLKDARIIHCDLKPENILLvnLDSPEIKLIDFGSA 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQIGATLarrLSFIGTPYWMAPEVaAVALKggYNELCDIWSLGITAIELAeLQPPLF-DVHPLRVLFLMTKSGYQPPR-L 237
Cdd:cd14212 153 CFENYTL---YTYIQSRFYRSPEV-LLGLP--YSTAIDMWSLGCIAAELF-LGLPLFpGNSEYNQLSRIIEMLGMPPDwM 225
                       250       260
                ....*....|....*....|....
gi 6005810  238 KEKGKWSaafHNFIKVTLTKSPKK 261
Cdd:cd14212 226 LEKGKNT---NKFFKKVAKSGGRS 246
PTKc_Abl cd05052
Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of ...
21-209 4.51e-17

Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) PTK that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. The Abl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270645 [Multi-domain]  Cd Length: 263  Bit Score: 82.08  E-value: 4.51e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVKmEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd05052  12 HKLGGGQYGEVYEGVWKKYNLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMPYGNLL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVT--GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS---------AQIGATLARR 169
Cdd:cd05052  91 DYLRECnrEELNAVVLLYMATQIASAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSrlmtgdtytAHAGAKFPIK 170
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 6005810  170 lsfigtpyWMAPEVAAvalkggYNEL---CDIWSLGITAIELA 209
Cdd:cd05052 171 --------WTAPESLA------YNKFsikSDVWAFGVLLWEIA 199
STKc_SIK cd14071
Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the ...
17-203 4.78e-17

Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SIKs are part of a complex network that regulates Na,K-ATPase to maintain sodium homeostasis and blood pressure. Vertebrates contain three forms of SIKs (SIK1-3) from three distinct genes, which display tissue-specific effects. SIK1, also called SNF1LK, controls steroidogenic enzyme production in adrenocortical cells. In the brain, both SIK1 and SIK2 regulate energy metabolism. SIK2, also called QIK or SNF1LK2, is involved in the regulation of gluconeogenesis in the liver and lipogenesis in adipose tissues, where it phosphorylates the insulin receptor substrate-1. In the liver, SIK3 (also called QSK) regulates cholesterol and bile acid metabolism. In addition, SIK2 plays an important role in the initiation of mitosis and regulates the localization of C-Nap1, a centrosome linker protein. The SIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270973 [Multi-domain]  Cd Length: 253  Bit Score: 81.67  E-value: 4.78e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDD-VSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd14071   2 YDIERTIGKGNFAVVKLARHRITKTEVAIKIIdKSQLDEEnLKKIYREVQIMKMLNHPHIIKLYQVMETKDMLYLVTEYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA--QIGATLArrlSF 172
Cdd:cd14071  82 SNGEIFDYLAQHGRMSEKEARKKFWQILSAVEYCHKRHIVHRDLKAENLLLDANMNIKIADFGFSNffKPGELLK---TW 158
                       170       180       190
                ....*....|....*....|....*....|.
gi 6005810  173 IGTPYWMAPEVAAVALKGGyNELcDIWSLGI 203
Cdd:cd14071 159 CGSPPYAAPEVFEGKEYEG-PQL-DIWSLGV 187
STKc_JNK2 cd07876
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the ...
17-210 5.05e-17

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK2 is expressed in every cell and tissue type. It is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143381 [Multi-domain]  Cd Length: 359  Bit Score: 83.54  E-value: 5.05e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV--KMEPDDDVSTLQKEILILKTCRHANIVAY------HGSYLWLQKLW 88
Cdd:cd07876  23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLsrPFQNQTHAKRAYRELVLLKCVNHKNIISLlnvftpQKSLEEFQDVY 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIsAQIGATLAR 168
Cdd:cd07876 103 LVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTACTNFM 178
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  169 RLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAE 210
Cdd:cd07876 179 MTPYVVTRYYRAPE---VILGMGYKENVDIWSVGCIMGELVK 217
STKc_TDY_MAPK cd07859
Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; ...
17-277 5.12e-17

Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20 while Oryza sativa contains at least 17 MAPKs. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143364 [Multi-domain]  Cd Length: 338  Bit Score: 83.29  E-value: 5.12e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVSTLQKEILILKTCRHANIVAYHGSYL-----WLQKLWI 89
Cdd:cd07859   2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINdvFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLppsrrEFKDIYV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAgslqDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG---ISAQIG 163
Cdd:cd07859  82 VFELMES----DLHQVIKAnddLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGlarVAFNDT 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 ATLARRLSFIGTPYWMAPEVAAvALKGGYNELCDIWSLGITAIELAeLQPPLFD----VHPLRVL--FLMTKSGYQPPRL 237
Cdd:cd07859 158 PTAIFWTDYVATRWYRAPELCG-SFFSKYTPAIDIWSIGCIFAEVL-TGKPLFPgknvVHQLDLItdLLGTPSPETISRV 235
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 6005810  238 K-EKG-KWSAAFHNFIKVTLT-KSPKKRPSATKMLSHQLVSQP 277
Cdd:cd07859 236 RnEKArRYLSSMRKKQPVPFSqKFPNADPLALRLLERLLAFDP 278
PTKc_FGFR3 cd05100
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs ...
14-269 5.15e-17

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. FGFR3 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173652 [Multi-domain]  Cd Length: 334  Bit Score: 83.15  E-value: 5.15e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKA------RDKVSGDL-VALKMVKME-PDDDVSTLQKEILILKTC-RHANIVAYHGSYLWL 84
Cdd:cd05100  11 RTRLTLGKPLGEGCFGQVVMAeaigidKDKPNKPVtVAVKMLKDDaTDKDLSDLVSEMEMMKMIgKHKNIINLLGACTQD 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQV-----------TGSLSELQISY-----VCREVLQGLAYLHSQKKIHRDIKGANILINDA 148
Cdd:cd05100  91 GPLYVLVEYASKGNLREYLRArrppgmdysfdTCKLPEEQLTFkdlvsCAYQVARGMEYLASQKCIHRDLAARNVLVTED 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  149 GEVRLADFGISAQI------GATLARRLSFigtpYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLR 222
Cdd:cd05100 171 NVMKIADFGLARDVhnidyyKKTTNGRLPV----KWMAPE---ALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  223 VLFLMTKSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05100 244 ELFKLLKEGH---RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLV 287
STKc_NIM1 cd14075
Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the ...
16-272 5.55e-17

Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIM1 is a widely-expressed kinase belonging to the AMP-activated protein kinase (AMPK) subfamily. Although present in most tissues, NIM1 kinase activity is only observed in the brain and testis. NIM1 is capable of autophosphorylating and activating itself, but may be present in other tissues in the inactive form. The physiological function of NIM1 has yet to be elucidated. The NIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270977 [Multi-domain]  Cd Length: 255  Bit Score: 81.62  E-value: 5.55e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14075   3 FYRIRGELGSGNFSQVKLGIHQLTKEKVAIKILdKTKLDQKTQRlLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaqigaTLARRL--- 170
Cdd:cd14075  83 ASGGELYTKISTEGKLSESEAKPLFAQIVSAVKHMHENNIIHRDLKAENVFYASNNCVKVGDFGFS-----THAKRGetl 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 -SFIGTPYWMAPEVaavaLKGGY--NELCDIWSLGItaielaelqpplfdvhplrVLFLMTkSGYQP------PRLKE-- 239
Cdd:cd14075 158 nTFCGSPPYAAPEL----FKDEHyiGIYVDIWALGV-------------------LLYFMV-TGVMPfraetvAKLKKci 213
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6005810  240 -KGKW------SAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14075 214 lEGTYtipsyvSEPCQELIRGILQPVPSDRYSIDEIKNSE 253
STKc_WNK4 cd14033
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze ...
23-239 6.39e-17

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK4 shows a restricted expression pattern and is usually found in epithelial cells. It is expressed in nephrons and in extrarenal tissues including intestine, eye, mammary glands, and prostate. WNK4 regulates a variety of ion transport proteins including apical or basolateral ion transporters, ion channels in the transcellular pathway, and claudins in the paracellular pathway. Mutations in WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK4 inhibits the activity of the thiazide-sensitive Na-Cl cotransporter (NCC), which is responsible for about 15% of NaCl reabsorption in the kidney. It also inhibits the renal outer medullary potassium channel (ROMK) and decreases its surface expression. Hypertension and hyperkalemia in PHAII patients with WNK4 mutations may be partly due to increased NaCl reabsorption through NCC and impaired renal potassium secretion by ROMK, respectively. The WNK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270935 [Multi-domain]  Cd Length: 261  Bit Score: 81.59  E-value: 6.39e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSG------DLVALKMVKMEPdddvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM----E 92
Cdd:cd14033   9 IGRGSFKTVYRGLDTETTvevawcELQTRKLSKGER----QRFSEEVEMLKGLQHPNIVRFYDSWKSTVRGHKCIilvtE 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILIND-AGEVRLADFGISAQIGATLARr 169
Cdd:cd14033  85 LMTSGTLKTYLKRFREMKLKLLQRWSRQILKGLHFLHSRCPpiLHRDLKCDNIFITGpTGSVKIGDLGLATLKRASFAK- 163
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  170 lSFIGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQP--------PRLKE 239
Cdd:cd14033 164 -SVIGTPEFMAPEM----YEEKYDEAVDVYAFGMCILEMATSEYPYSECQNAAQIYRKVTSGIKPdsfykvkvPELKE 236
PTKc_InsR_like cd05032
Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer ...
13-213 9.54e-17

Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. InsR and IGF-1R are receptor PTKs (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. The InsR-like subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173625 [Multi-domain]  Cd Length: 277  Bit Score: 81.24  E-value: 9.54e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFK--ARDKVSGDL---VALKMVKMEP-DDDVSTLQKEILILK--TCRHanIVAYHGSYLWL 84
Cdd:cd05032   4 PREKITLIRELGQGSFGMVYEglAKGVVKGEPetrVAIKTVNENAsMRERIEFLNEASVMKefNCHH--VVRLLGVVSTG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQ----------DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLA 154
Cdd:cd05032  82 QPTLVVMELMAKGDLKsylrsrrpeaENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG 161
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  155 DFGISAQIGATLARRLSFIGT-PY-WMAPEvaavALKGG-YNELCDIWSLGITAIELAEL--QP 213
Cdd:cd05032 162 DFGMTRDIYETDYYRKGGKGLlPVrWMAPE----SLKDGvFTTKSDVWSFGVVLWEMATLaeQP 221
STKc_TBK1 cd13988
Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the ...
23-204 9.70e-17

Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TBK1 is also called T2K and NF-kB-activating kinase. It is widely expressed in most cell types and acts as an IkappaB kinase (IKK)-activating kinase responsible for NF-kB activation in response to growth factors. It plays a role in modulating inflammatory responses through the NF-kB pathway. TKB1 is also a major player in innate immune responses since it functions as a virus-activated kinase necessary for establishing an antiviral state. It phosphorylates IRF-3 and IRF-7, which are important transcription factors for inducing type I interferon during viral infection. In addition, TBK1 may also play roles in cell transformation and oncogenesis. The TBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270890 [Multi-domain]  Cd Length: 316  Bit Score: 82.15  E-value: 9.70e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDdvsTLQKEILILKTCRHANIVAYHGSY--LWLQKLWICMEFCGA 96
Cdd:cd13988   1 LGQGATANVFRGRHKKTGDLYAVKVFNnlsfMRPLD---VQMREFEVLKKLNHKNIVKLFAIEeeLTTRHKVLVMELCPC 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL--INDAGEV--RLADFGISAQIGATlARR 169
Cdd:cd13988  78 GSLYTVLEEPSNaygLPESEFLIVLRDVVAGMNHLRENGIVHRDIKPGNIMrvIGEDGQSvyKLTDFGAARELEDD-EQF 156
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEV--AAVALKG---GYNELCDIWSLGIT 204
Cdd:cd13988 157 VSLYGTEEYLHPDMyeRAVLRKDhqkKYGATVDLWSIGVT 196
PTKc_FGFR1 cd05098
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs ...
13-269 1.03e-16

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. FGFR1 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270678 [Multi-domain]  Cd Length: 302  Bit Score: 81.60  E-value: 1.03e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKAR----DKVSGDL---VALKMVKMEP-DDDVSTLQKEILILKTC-RHANIVAYHGSYLW 83
Cdd:cd05098  11 PRDRLVLGKPLGEGCFGQVVLAEaiglDKDKPNRvtkVAVKMLKSDAtEKDLSDLISEMEMMKMIgKHKNIINLLGACTQ 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 LQKLWICMEFCGAGSLQDIYQV----------------TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND 147
Cdd:cd05098  91 DGPLYVIVEYASKGNLREYLQArrppgmeycynpshnpEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  148 AGEVRLADFGISAQI------GATLARRLSFigtpYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPL 221
Cdd:cd05098 171 DNVMKIADFGLARDIhhidyyKKTTNGRLPV----KWMAPEALFDRI---YTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  222 RVLFLMTKSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05098 244 EELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
PTKc_Lck_Blk cd05067
Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs ...
13-208 1.06e-16

Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lck/Blk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270652 [Multi-domain]  Cd Length: 264  Bit Score: 81.09  E-value: 1.06e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEV----FKARDKVSgdLVALKMVKMEPdddvSTLQKEILILKTCRHANIVAYHgSYLWLQKLW 88
Cdd:cd05067   5 PRETLKLVERLGAGQFGEVwmgyYNGHTKVA--IKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY-AVVTQEPIY 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDiYQVTGSLSELQISYV---CREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI------- 158
Cdd:cd05067  78 IITEYMENGSLVD-FLKTPSGIKLTINKLldmAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLarliedn 156
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  159 --SAQIGATLARRlsfigtpyWMAPEVAAValkGGYNELCDIWSLGITAIEL 208
Cdd:cd05067 157 eyTAREGAKFPIK--------WTAPEAINY---GTFTIKSDVWSFGILLTEI 197
PTKc_Chk cd05083
Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the ...
16-268 1.11e-16

Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). Chk inhibits Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Like Csk, it is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases that are anchored to the plasma membrane, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. The Chk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270666 [Multi-domain]  Cd Length: 254  Bit Score: 80.69  E-value: 1.11e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKArdKVSGDLVALKMVKMepDDDVSTLQKEILILKTCRHANIVAYHGSYLWlQKLWICMEFCG 95
Cdd:cd05083   7 KLTLGEIIGEGEFGAVLQG--EYMGQKVAVKNIKC--DVTAQAFLEETAVMTKLQHKNLVRLLGVILH-NGLYIVMELMS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGS--LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-AQIGATLARRLSF 172
Cdd:cd05083  82 KGNLVNFLRSRGRalVPVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKISDFGLAkVGSMGVDNSRLPV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  173 igtpYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYqppRLKEKGKWSAAFHNFI 251
Cdd:cd05083 162 ----KWTAPE----ALKNKkFSSKSDVWSYGVLLWEVFSYGRAPYPKMSVKEVKEAVEKGY---RMEPPEGCPPDVYSIM 230
                       250
                ....*....|....*..
gi 6005810  252 KVTLTKSPKKRPSATKM 268
Cdd:cd05083 231 TSCWEAEPGKRPSFKKL 247
STKc_ROCK2 cd05621
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
15-216 1.34e-16

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270771 [Multi-domain]  Cd Length: 379  Bit Score: 82.74  E-value: 1.34e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05621  52 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLskfEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 131
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT-LARRL 170
Cdd:cd05621 132 EYMPGGDLVNLMS-NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKYGHLKLADFGTCMKMDETgMVHCD 210
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  171 SFIGTPYWMAPEVaaVALKGG---YNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05621 211 TAVGTPDYISPEV--LKSQGGdgyYGRECDWWSVGVFLFEMLVGDTPFY 257
PTKc_Btk_Bmx cd05113
Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow ...
12-211 1.34e-16

Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor, leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. The Btk/Bmx subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173657 [Multi-domain]  Cd Length: 256  Bit Score: 80.31  E-value: 1.34e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPRdHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDDDVstlqKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd05113   2 DPK-DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKegsMSEDEFI----EEAKVMMNLSHEKLVQLYGVCTKQRPIF 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATla 167
Cdd:cd05113  76 IITEYMANGCLLNYLREMRKrFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-- 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  168 RRLSFIGTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL 211
Cdd:cd05113 154 EYTSSVGSKFpvrWSPPE---VLMYSKFSSKSDVWAFGVLMWEVYSL 197
STKc_DCKL1 cd14183
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called ...
15-275 1.52e-16

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL1 (or DCAMKL1) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL1 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL1 interacts with tubulin, glucocorticoid receptor, dynein, JIP1/2, caspases (3 and 8), and calpain, among others. It plays roles in neurogenesis, neuronal migration, retrograde transport, and neuronal apoptosis. The DCKL1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271085 [Multi-domain]  Cd Length: 268  Bit Score: 80.42  E-value: 1.52e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd14183   6 ERYKVGRTIGDGNFAVVKECVERSTGREYALKIInKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDMPTELYLVMEL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQIGATLarr 169
Cdd:cd14183  86 VKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVyehqDGSKSLKLGDFGLATVVDGPL--- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTPYWMAPEVAAvalKGGYNELCDIWSLG-ITAIELAELQPPLFDVHPLRVLF---LMTKSGYQPPRlkekgkW-- 243
Cdd:cd14183 163 YTVCGTPTYVAPEIIA---ETGYGLKVDIWAAGvITYILLCGFPPFRGSGDDQEVLFdqiLMGQVDFPSPY------Wdn 233
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  244 -SAAFHNFIKVTLTKSPKKRPSATKMLSHQLVS 275
Cdd:cd14183 234 vSDSAKELITMMLQVDVDQRYSALQVLEHPWVN 266
STKc_CK1 cd14016
Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the ...
16-159 1.62e-16

Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK1 phosphorylates a variety of substrates including enzymes, transcription and splice factors, cytoskeletal proteins, viral oncogenes, receptors, and membrane-associated proteins. There are mutliple isoforms of CK1 and in mammals, seven isoforms (alpha, beta, gamma1-3, delta, and epsilon) have been characterized. These isoforms differ mainly in the length and structure of their C-terminal non-catalytic region. Some isoforms have several splice variants such as the long (L) and short (S) variants of CK1alpha. CK1 proteins are involved in the regulation of many cellular processes including membrane transport processes, circadian rhythm, cell division, apoptosis, and the development of cancer and neurodegenerative diseases. The CK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270918 [Multi-domain]  Cd Length: 266  Bit Score: 80.19  E-value: 1.62e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmePDDDVSTLQKEILILKTCRHAN----IVAY--HGSYLWLqklwi 89
Cdd:cd14016   1 RYKLVKKIGSGSFGEVYLGIDLKTGEEVAIKIEK--KDSKHPQLEYEAKVYKLLQGGPgiprLYWFgqEGDYNVM----- 73
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810   90 CMEFCGAgSLQDIYQVTG---SL-SELQISYvcrEVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGIS 159
Cdd:cd14016  74 VMDLLGP-SLEDLFNKCGrkfSLkTVLMLAD---QMISRLEYLHSKGYIHRDIKPENFLMglgKNSNKVYLIDFGLA 146
STKc_WNK2_like cd14032
Catalytic domain of With No Lysine (WNK) 2-like Serine/Threonine kinases; STKs catalyze the ...
23-276 2.49e-16

Catalytic domain of With No Lysine (WNK) 2-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK2 is widely expressed and has been shown to be epigenetically silenced in gliomas. It inhibits cell growth by acting as a negative regulator of MEK1-ERK1/2 signaling. WNK2 modulates growth factor-induced cancer cell proliferation, suggesting that it may be a tumor suppressor gene. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. The WNK2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270934 [Multi-domain]  Cd Length: 266  Bit Score: 79.74  E-value: 2.49e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVAL------KMVKMEPdddvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM----E 92
Cdd:cd14032   9 LGRGSFKTVYKGLDTETWVEVAWcelqdrKLTKVER----QRFKEEAEMLKGLQHPNIVRFYDFWESCAKGKRCIvlvtE 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILIND-AGEVRLADFGISAQIGATLARr 169
Cdd:cd14032  85 LMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPpiIHRDLKCDNIFITGpTGSVKIGDLGLATLKRASFAK- 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 lSFIGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQP--------PRLKEkg 241
Cdd:cd14032 164 -SVIGTPEFMAPEM----YEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPasfekvtdPEIKE-- 236
                       250       260       270
                ....*....|....*....|....*....|....*
gi 6005810  242 kwsaafhnFIKVTLTKSPKKRPSATKMLSHQLVSQ 276
Cdd:cd14032 237 --------IIGECICKNKEERYEIKDLLSHAFFAE 263
STKc_CK2_alpha cd14132
Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the ...
15-216 3.10e-16

Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK2 is a tetrameric protein with two catalytic (alpha) and two regulatory (beta) subunits. It is constitutively active and ubiquitously expressed, and is found in the cytoplasm, nucleus, as well as in the plasma membrane. It phosphorylates a wide variety of substrates including gylcogen synthase, cell cycle proteins, nuclear proteins (e.g. DNA topoisomerase II), and ion channels (e.g. ENaC), among others. It may be considered a master kinase controlling the activity or lifespan of many other kinases and exerting its effect over cell fate, gene expression, protein synthesis and degradation, and viral infection. CK2 is implicated in every stage of the cell cycle and is required for cell cycle progression. It plays crucial roles in cell differentiation, proliferation, and survival, and is thus implicated in cancer. CK2 is not an oncogene by itself but elevated CK2 levels create an environment that enhances the survival of tumor cells. The CK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271034 [Multi-domain]  Cd Length: 306  Bit Score: 80.28  E-value: 3.10e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVstlQKEILILKTCR-HANIVayhgsylwlqKLW----- 88
Cdd:cd14132  18 DDYEIIRKIGRGKYSEVFEGINIGNNEKVVIKVLKPVKKKKI---KREIKILQNLRgGPNIV----------KLLdvvkd 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 -------ICMEFCGAGSLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADFGisa 160
Cdd:cd14132  85 pqsktpsLIFEYVNNTDFKTLYP---TLTDYDIRYYMYELLKALDYCHSKGIMHRDVKPHNIMIDhEKRKLRLIDWG--- 158
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  161 qigatLArrlSF----------IGTPYWMAPEVaAVALKgGYNELCDIWSLGITaieLAEL---QPPLF 216
Cdd:cd14132 159 -----LA---EFyhpgqeynvrVASRYYKGPEL-LVDYQ-YYDYSLDMWSLGCM---LASMifrKEPFF 214
STKc_Kin4 cd14076
Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the ...
17-203 3.15e-16

Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kin4 is a central component of the spindle position checkpoint (SPOC), which monitors spindle position and regulates the mitotic exit network (MEN). Kin4 associates with spindle pole bodies in mother cells to inhibit MEN signaling and delay mitosis until the anaphase nucleus is properly positioned along the mother-bud axis. Kin4 activity is regulated by both the bud neck-associated kinase Elm1 and protein phosphatase 2A. The Kin4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270978 [Multi-domain]  Cd Length: 270  Bit Score: 79.84  E-value: 3.15e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEV-----FKARDKVSGDLVALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd14076   3 YILGRTLGEGEFGKVklgwpLPKANHRSGVQVAIKLIRrdtQQENCQTSKIMREINILKGLTHPNIVRLLDVLKTKKYIG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVTGSLSElqiSYVCR---EVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd14076  83 IVLEFVSGGELFDYILARRRLKD---SVACRlfaQLISGVAYLHKKGVVHRDLKLENLLLDKNRNLVITDFGFANTFDHF 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSF-IGTPYWMAPEVaaVALKGGYN-ELCDIWSLGI 203
Cdd:cd14076 160 NGDLMSTsCGSPCYAAPEL--VVSDSMYAgRKADIWSCGV 197
STKc_Sck1_like cd05586
Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine ...
23-266 3.44e-16

Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Sck1 and similar fungal proteins. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270738 [Multi-domain]  Cd Length: 330  Bit Score: 80.69  E-value: 3.44e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVK----MEPDDDVSTLQKEILILKTCRHAN--IVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05586   1 IGKGTFGQVYQVRKKDTRRIYAMKVLSkkviVAKKEVAHTIGERNILVRTALDESpfIVGLKFSFQTPTDLYLVTDYMSG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAqigATLARRL---SFI 173
Cdd:cd05586  81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKNDIVYRDLKPENILLDANGHIALCDFGLSK---ADLTDNKttnTFC 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPLF--DVHPLRVLFLMTKSGYQPPRLKEKGKwsaafhNFI 251
Cdd:cd05586 158 GTTEYLAPEV--LLDEKGYTKMVDFWSLGVLVFEMCCGWSPFYaeDTQQMYRNIAFGKVRFPKDVLSDEGR------SFV 229
                       250
                ....*....|....*
gi 6005810  252 KVTLTKSPKKRPSAT 266
Cdd:cd05586 230 KGLLNRNPKHRLGAH 244
STKc_MPK1 cd07857
Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; ...
16-216 3.51e-16

Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. MAPKs are important mediators of cellular responses to extracellular signals. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173750 [Multi-domain]  Cd Length: 332  Bit Score: 80.53  E-value: 3.51e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGD--LVALKMVkmepdddVSTLQKEILILKTCR----------HANIV-------- 75
Cdd:cd07857   1 RYELIKELGQGAYGIVCSARNAETSEeeTVAIKKI-------TNVFSKKILAKRALRelkllrhfrgHKNITclydmdiv 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   76 ---AYHGSYLWlQKLwicMEFcgagslqDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAG 149
Cdd:cd07857  74 fpgNFNELYLY-EEL---MEA-------DLHQIIRSgqpLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC 142
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  150 EVRLADFGISAQIGATLARRLSFI----GTPYWMAPEVaaVALKGGYNELCDIWSLGITaieLAEL--QPPLF 216
Cdd:cd07857 143 ELKICDFGLARGFSENPGENAGFMteyvATRWYRAPEI--MLSFQSYTKAIDVWSVGCI---LAELlgRKPVF 210
PTKc_Jak3_rpt2 cd05081
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the ...
16-208 3.64e-16

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270665 [Multi-domain]  Cd Length: 283  Bit Score: 79.94  E-value: 3.64e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKAR-DKV---SGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHG-SY-LWLQKLWI 89
Cdd:cd05081   5 HLKYISQLGKGNFGSVELCRyDPLgdnTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGvSYgPGRRSLRL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSE-----LQISYVCRevlqGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIga 164
Cdd:cd05081  85 VMEYLPSGCLRDFLQRHRARLDasrllLYSSQICK----GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL-- 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  165 TLARRLSFIGTP-----YWMAPEVAAVALkggYNELCDIWSLGITAIEL 208
Cdd:cd05081 159 PLDKDYYVVREPgqspiFWYAPESLSDNI---FSRQSDVWSFGVVLYEL 204
STKc_IKK_beta cd14038
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
22-207 4.26e-16

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKbeta is involved in the classical pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The classical pathway regulates the majority of genes activated by NF-kB including those encoding cytokines, chemokines, leukocyte adhesion molecules, and anti-apoptotic factors. It involves NEMO (NF-kB Essential MOdulator)- and IKKbeta-dependent phosphorylation and degradation of the Inhibitor of NF-kB (IkB), which liberates NF-kB dimers (typified by the p50-p65 heterodimer) from an inactive IkB/dimeric NF-kB complex, enabling them to migrate to the nucleus where they regulate gene transcription. The IKKbeta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270940 [Multi-domain]  Cd Length: 290  Bit Score: 79.62  E-value: 4.26e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKARDKVSGDLVALKMVKMEpdddVSTLQK-----EILILKTCRHANIVAYHGSYLWLQKL------WIC 90
Cdd:cd14038   1 RLGTGGFGNVLRWINQETGEQVAIKQCRQE----LSPKNRerwclEIQIMKRLNHPNVVAARDVPEGLQKLapndlpLLA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQ---DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDaGEVRLadfgISAQIGATLA 167
Cdd:cd14038  77 MEYCQGGDLRkylNQFENCCGLREGAILTLLSDISSALRYLHENRIIHRDLKPENIVLQQ-GEQRL----IHKIIDLGYA 151
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  168 RRL-------SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIE 207
Cdd:cd14038 152 KELdqgslctSFVGTLQYLAPELLE---QQKYTVTVDYWSFGTLAFE 195
STKc_MRCK_beta cd05624
Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control ...
14-216 5.27e-16

Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-beta is expressed ubiquitously in many tissues. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270774 [Multi-domain]  Cd Length: 409  Bit Score: 81.21  E-value: 5.27e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKE--ILILKTCRHanIVAYHGSYLWLQKLW 88
Cdd:cd05624  71 RDDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILnkwEMLKRAETACFREErnVLVNGDCQW--ITTLHYAFQDENYLY 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG--AT 165
Cdd:cd05624 149 LVMDYYVGGDLLTLLsKFEDKLPEDMARFYIGEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNddGT 228
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  166 LARRLSfIGTPYWMAPEV--AAVALKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05624 229 VQSSVA-VGTPDYISPEIlqAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 280
PTKc_Src_Fyn_like cd14203
Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
21-264 6.81e-16

Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes a subset of Src-like PTKs including Src, Fyn, Yrk, and Yes, which are all widely expressed. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. They are also implicated in acute inflammatory responses and osteoclast function. The Src/Fyn-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271105 [Multi-domain]  Cd Length: 248  Bit Score: 78.03  E-value: 6.81e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDddvsTLQKEILILKTCRHANIVAYHgSYLWLQKLWICMEFCGAG 97
Cdd:cd14203   1 VKLGQGCFGEVWMGTWNGTTK-VAIKTLKpgtMSPE----AFLEEAQIMKKLRHDKLVQLY-AVVSEEPIYIVTEFMSKG 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQ-VTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfi 173
Cdd:cd14203  75 SLLDFLKdGEGKYLKLpQLVDMAAQIASGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIedNEYTARQ---- 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYqppRLKEKGKWSAAFHNF 250
Cdd:cd14203 151 GAKFpikWTAPE---AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY---RMPCPPGCPESLHEL 224
                       250
                ....*....|....
gi 6005810  251 IKVTLTKSPKKRPS 264
Cdd:cd14203 225 MCQCWRKDPEERPT 238
PTKc_Yes cd05069
Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the ...
13-264 7.07e-16

Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Yes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270654 [Multi-domain]  Cd Length: 279  Bit Score: 78.96  E-value: 7.07e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDddvsTLQKEILILKTCRHANIVAYHgSYLWLQKLWI 89
Cdd:cd05069  10 PRESLRLDVKLGQGCFGEVWMGTWNGTTK-VAIKTLKpgtMMPE----AFLQEAQIMKKLRHDKLVPLY-AVVSEEPIYI 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQD-IYQVTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GAT 165
Cdd:cd05069  84 VTEFMGKGSLLDfLKEGDGKYLKLpQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIedNEY 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRlsfiGTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKekgK 242
Cdd:cd05069 164 TARQ----GAKFpikWTAPE---AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQ---G 233
                       250       260
                ....*....|....*....|..
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05069 234 CPESLHELMKLCWKKDPDERPT 255
STKc_GRK4_like cd05605
Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs ...
23-262 7.35e-16

Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. They contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270756 [Multi-domain]  Cd Length: 285  Bit Score: 78.94  E-value: 7.35e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKM-----VKMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLWICMEFCGAG 97
Cdd:cd05605   8 LGKGGFGEVCACQVRATGKMYACKKlekkrIKKRKGEAMALNEKQILEKVNSRFVVSLAY--AYETKDALCLVLTIMNGG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQ-DIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfI 173
Cdd:cd05605  86 DLKfHIYNMGNPgFEEERAVFYAAEITCGLEHLHSERIVYRDLKPENILLDDHGHVRISDLGLAVEIpeGETIRGR---V 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAvalkggyNEL----CDIWSLGITAIELAELQPPlFDVHPLRVlflmtKSGYQPPRLKE-----KGKWS 244
Cdd:cd05605 163 GTVGYMAPEVVK-------NERytfsPDWWGLGCLIYEMIEGQAP-FRARKEKV-----KREEVDRRVKEdqeeySEKFS 229
                       250
                ....*....|....*...
gi 6005810  245 AAFHNFIKVTLTKSPKKR 262
Cdd:cd05605 230 EEAKSICSQLLQKDPKTR 247
STKc_BMPR2_AMHR2 cd14054
Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and ...
21-209 8.50e-16

Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and Anti-Muellerian Hormone Type II Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR2 and AMHR2 belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors (GDFs), and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. BMPR2 and AMHR2 act primarily as a receptor for BMPs and AMH, respectively. BMPs induce bone and cartilage formation, as well as regulate tooth, kidney, skin, hair, haematopoietic, and neuronal development. Mutations in BMPR2A is associated with familial pulmonary arterial hypertension. AMH is mainly responsible for the regression of Mullerian ducts during male sex differentiation. It is expressed exclusively by somatic cells of the gonads. Mutations in either AMH or AMHR2 cause persistent Mullerian duct syndrome (PMDS), a rare form of male pseudohermaphroditism characterized by the presence of Mullerian derivatives (ovary and tubes) in otherwise normally masculine males. The BMPR2/AMHR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270956 [Multi-domain]  Cd Length: 300  Bit Score: 78.94  E-value: 8.50e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKArdKVSGDLVAlkmVKMEPDDDVSTLQ--KEILILKTCRHANIVAYHGS------YLWLQKLwICME 92
Cdd:cd14054   1 QLIGQGRYGTVWKG--SLDERPVA---VKVFPARHRQNFQneKDIYELPLMEHSNILRFIGAderptaDGRMEYL-LVLE 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDiYQVTGSLSELQISYVCREVLQGLAYLHSQKKI---------HRDIKGANILINDAGEVRLADFGISAQI- 162
Cdd:cd14054  75 YAPKGSLCS-YLRENTLDWMSSCRMALSLTRGLAYLHTDLRRgdqykpaiaHRDLNSRNVLVKADGSCVICDFGLAMVLr 153
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARR---------LSFIGTPYWMAPEV--AAVALKGGYNEL--CDIWSLGITAIELA 209
Cdd:cd14054 154 GSSLVRGrpgaaenasISEVGTLRYMAPEVleGAVNLRDCESALkqVDVYALGLVLWEIA 213
STKc_LATS2 cd05626
Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs ...
20-220 8.66e-16

Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. The LATS2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173715 [Multi-domain]  Cd Length: 381  Bit Score: 80.06  E-value: 8.66e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05626   6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDvlnRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA-----------QIGA- 164
Cdd:cd05626  86 GDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTgfrwthnskyyQKGSh 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 -------------------------TLARRL----------SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELA 209
Cdd:cd05626 166 irqdsmepsdlwddvsncrcgdrlkTLEQRAtkqhqrclahSLVGTPNYIAPE---VLLRKGYTQLCDWWSVGVILFEML 242
                       250
                ....*....|.
gi 6005810  210 ELQPPLFDVHP 220
Cdd:cd05626 243 VGQPPFLAPTP 253
STKc_ACVR2 cd14053
Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the ...
25-183 9.98e-16

Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as ACVR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. Vertebrates contain two ACVR2 proteins, ACVR2a (or ActRIIA) and ACVR2b (or ActRIIB). The ACVR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270955 [Multi-domain]  Cd Length: 290  Bit Score: 78.52  E-value: 9.98e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   25 GGTYGEVFKARdkVSGDLVAlkmVKMEPDDDVSTLQKEILILKTCR--HANIVAYHGSYLWLQ----KLWICMEFCGAGS 98
Cdd:cd14053   5 RGRFGAVWKAQ--YLNRLVA---VKIFPLQEKQSWLTEREIYSLPGmkHENILQFIGAEKHGEsleaEYWLITEFHERGS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDiYQVTGSLSELQISYVCREVLQGLAYLHS-------QKK---IHRDIKGANILINDAGEVRLADFGisaqigatLAR 168
Cdd:cd14053  80 LCD-YLKGNVISWNELCKIAESMARGLAYLHEdipatngGHKpsiAHRDFKSKNVLLKSDLTACIADFG--------LAL 150
                       170       180
                ....*....|....*....|....*
gi 6005810  169 RLSF----------IGTPYWMAPEV 183
Cdd:cd14053 151 KFEPgkscgdthgqVGTRRYMAPEV 175
PHA03207 PHA03207
serine/threonine kinase US3; Provisional
14-280 1.02e-15

serine/threonine kinase US3; Provisional


Pssm-ID: 165473 [Multi-domain]  Cd Length: 392  Bit Score: 79.89  E-value: 1.02e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    14 RDHYDLLQRLGGGTYGEVF--KARDKVSGDLVALKMVKmepddDVSTLQKEILILKTCRHANIVAYHGSYLWlqKLWICM 91
Cdd:PHA03207  91 RMQYNILSSLTPGSEGEVFvcTKHGDEQRKKVIVKAVT-----GGKTPGREIDILKTISHRAIINLIHAYRW--KSTVCM 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    92 EF----CGAGSLQDIyqvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL- 166
Cdd:PHA03207 164 VMpkykCDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPd 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   167 -ARRLSFIGTPYWMAPEVAAValkGGYNELCDIWSLGITAIELAELQPPLF------------------DVHPL------ 221
Cdd:PHA03207 241 tPQCYGWSGTLETNSPELLAL---DPYCAKTDIWSAGLVLFEMSVKNVTLFgkqvkssssqlrsiircmQVHPLefpqng 317
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810   222 --------RVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPGLN 280
Cdd:PHA03207 318 stnlckhfKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN 384
STKc_GRK4 cd05631
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs ...
16-262 1.06e-15

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures and is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173720 [Multi-domain]  Cd Length: 285  Bit Score: 78.50  E-value: 1.06e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLqrlGGGTYGEVFKARDKVSGDLVALKM-----VKMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLWIC 90
Cdd:cd05631   4 HYRVL---GKGGFGEVCACQVRATGKMYACKKlekkrIKKRKGEAMALNEKRILEKVNSRFVVSLAY--AYETKDALCLV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQ-DIYQVTGS-LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATL 166
Cdd:cd05631  79 LTIMNGGDLKfHIYNMGNPgFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIpeGETV 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRlsfIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVlflmtKSGYQPPRLKE-----KG 241
Cdd:cd05631 159 RGR---VGTVGYMAPEVIN---NEKYTFSPDWWGLGCLIYEMIQGQSP-FRKRKERV-----KREEVDRRVKEdqeeySE 226
                       250       260
                ....*....|....*....|.
gi 6005810  242 KWSAAFHNFIKVTLTKSPKKR 262
Cdd:cd05631 227 KFSEDAKSICRMLLTKNPKER 247
PTZ00036 PTZ00036
glycogen synthase kinase; Provisional
3-216 1.16e-15

glycogen synthase kinase; Provisional


Pssm-ID: 173333 [Multi-domain]  Cd Length: 440  Bit Score: 80.46  E-value: 1.16e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     3 VVDPDIfNRDPRDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDvstlQKEILILKTCRHANIVaYHGSYL 82
Cdd:PTZ00036  55 MIDNDI-NRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYK----NRELLIMKNLNHINII-FLKDYY 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    83 WLQK---------LWICMEFCGagslQDIYQV-------TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN 146
Cdd:PTZ00036 129 YTECfkkneknifLNVVMEFIP----QTVHKYmkhyarnNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6005810   147 -DAGEVRLADFGiSAQIGATLARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAeLQPPLF 216
Cdd:PTZ00036 205 pNTHTLKLCDFG-SAKNLLAGQRSVSYICSRFYRAPELMLGATN--YTTHIDLWSLGCIIAEMI-LGYPIF 271
PTKc_Wee1a cd14138
Catalytic domain of the Protein Tyrosine Kinase, Wee1a; PTKs catalyze the transfer of the ...
20-271 1.22e-15

Catalytic domain of the Protein Tyrosine Kinase, Wee1a; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of human Wee1a, Xenopus laevis Wee1b (XeWee1b) and similar vertebrate proteins. Members of this subfamily show a wide expression pattern. XeWee1b functions after the first zygotic cell divisions. It is expressed in all tissues and is also present after the gastrulation stage of embryos. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The Wee1a subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271040 [Multi-domain]  Cd Length: 276  Bit Score: 78.14  E-value: 1.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKmEP----DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd14138  10 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSK-KPlagsVDEQNALREVYAHAVLGQHSHVVRYYSAWAEDDHMLIQNEYCN 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDI----YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN-----------------DAGEV--R 152
Cdd:cd14138  89 GGSLADAisenYRIMSYFTEPELKDLLLQVARGLKYIHSMSLVHMDIKPSNIFISrtsipnaaseegdedewASNKVifK 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  153 LADFGISAQIGATLARRlsfiGTPYWMAPEVaavaLKGGYNEL--CDIWSLGITAIELAELQP-PLF--DVHPLRVLFLm 227
Cdd:cd14138 169 IGDLGHVTRVSSPQVEE----GDSRFLANEV----LQENYTHLpkADIFALALTVVCAAGAEPlPTNgdQWHEIRQGKL- 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 6005810  228 tksgyqpPRLKEkgKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14138 240 -------PRIPQ--VLSQEFLDLLKVMIHPDPERRPSAVALVKH 274
STKc_TEY_MAPK cd07858
Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; ...
23-224 1.33e-15

Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype of plant MAPKs and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143363 [Multi-domain]  Cd Length: 337  Bit Score: 78.95  E-value: 1.33e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCRHANIVAyhgsylwlqkLWICMEFCGAGSLQ 100
Cdd:cd07858  13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRtlREIKLLRHLDHENVIA----------IKDIMPPPHREAFN 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQV--------------TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL 166
Cdd:cd07858  83 DVYIVyelmdtdlhqiirsSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  167 ARRLSFIGTPYWMAPEVaaVALKGGYNELCDIWSLGITaieLAEL--QPPLFD----VHPLRVL 224
Cdd:cd07858 163 DFMTEYVVTRWYRAPEL--LLNCSEYTTAIDVWSVGCI---FAELlgRKPLFPgkdyVHQLKLI 221
STKc_TLK cd13990
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the ...
17-203 1.47e-15

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270892 [Multi-domain]  Cd Length: 279  Bit Score: 77.74  E-value: 1.47e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD--DD-----VSTLQKEILILKTCRHANIVayhgsylwlqKLWI 89
Cdd:cd13990   2 YLLLNLLGKGGFSEVYKAFDLVEQRYVACKIHQLNKDwsEEkkqnyIKHALREYEIHKSLDHPRIV----------KLYD 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 C-----------MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILI---NDAGEVRL 153
Cdd:cd13990  72 VfeidtdsfctvLEYCDGNDLDFYLKQHKSIPEREARSIIMQVVSALKYLNEIKPpiIHYDLKPGNILLhsgNVSGEIKI 151
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  154 ADFGISAQI--------GATLARRlsFIGTpYW--------MAPEVAAVALKggynelCDIWSLGI 203
Cdd:cd13990 152 TDFGLSKIMddesynsdGMELTSQ--GAGT-YWylppecfvVGKTPPKISSK------VDVWSVGV 208
STKc_GRK6 cd05630
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs ...
23-281 1.61e-15

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK6 is widely expressed in many tissues and is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270779 [Multi-domain]  Cd Length: 285  Bit Score: 77.76  E-value: 1.61e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKM-----VKMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLWICMEFCGAG 97
Cdd:cd05630   8 LGKGGFGEVCACQVRATGKMYACKKlekkrIKKRKGEAMALNEKQILEKVNSRFVVSLAY--AYETKDALCLVLTLMNGG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQ-DIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfI 173
Cdd:cd05630  86 DLKfHIYHMgQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVpeGQTIKGR---V 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKV 253
Cdd:cd05630 163 GTVGYMAPEVVK---NERYTFSPDWWALGCLLYEMIAGQSP-FQQRKKKIKREEVERLVKEVPEEYSEKFSPQARSLCSM 238
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  254 TLTKSPKKR-----PSATKMLSHQLVSQPGLNR 281
Cdd:cd05630 239 LLCKDPAERlgcrgGGAREVKEHPLFKKLNFKR 271
STKc_GRK5 cd05632
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs ...
14-262 1.86e-15

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270780 [Multi-domain]  Cd Length: 313  Bit Score: 78.09  E-value: 1.86e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKM-----VKMEPDDDVSTLQKEILILKTCRHANIVAYhgSYLWLQKLW 88
Cdd:cd05632   1 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRlekkrIKKRKGESMALNEKQILEKVNSQFVVNLAY--AYETKDALC 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQ-DIYQVTG-SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GA 164
Cdd:cd05632  79 LVLTIMNGGDLKfHIYNMGNpGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIpeGE 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRlsfIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWS 244
Cdd:cd05632 159 SIRGR---VGTVGYMAPEVLN---NQRYTLSPDYWGLGCLIYEMIEGQSP-FRGRKEKVKREEVDRRVLETEEVYSAKFS 231
                       250
                ....*....|....*...
gi 6005810  245 AAFHNFIKVTLTKSPKKR 262
Cdd:cd05632 232 EEAKSICKMLLTKDPKQR 249
PTKc_Fyn cd05070
Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the ...
13-264 1.92e-15

Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Fyn/Yrk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase.


Pssm-ID: 270655 [Multi-domain]  Cd Length: 274  Bit Score: 77.42  E-value: 1.92e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFkaRDKVSGDL-VALKMVK---MEPDddvsTLQKEILILKTCRHANIVAYHgSYLWLQKLW 88
Cdd:cd05070   7 PRESLQLIKRLGNGQFGEVW--MGTWNGNTkVAIKTLKpgtMSPE----SFLEEAQIMKKLKHDKLVQLY-AVVSEEPIY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQvTGSLSELQISYV---CREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--G 163
Cdd:cd05070  80 IVTEYMSKGSLLDFLK-DGEGRALKLPNLvdmAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIedN 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  164 ATLARRlsfiGTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEk 240
Cdd:cd05070 159 EYTARQ----GAKFpikWTAPE---AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD- 230
                       250       260
                ....*....|....*....|....
gi 6005810  241 gkWSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05070 231 --CPISLHELMIHCWKKDPEERPT 252
STKc_HUNK cd14070
Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase ...
17-272 1.93e-15

Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase (also called MAK-V); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HUNK/MAK-V was identified from a mammary tumor in an MMTV-neu transgenic mouse. It is required for the metastasis of c-myc-induced mammary tumors, but is not necessary for c-myc-induced primary tumor formation or normal development. It is required for HER2/neu-induced tumor formation and maintenance of the cells' tumorigenic phenotype. It is over-expressed in aggressive subsets of ovary, colon, and breast carcinomas. HUNK interacts with synaptopodin, and may also play a role in synaptic plasticity. The HUNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270972 [Multi-domain]  Cd Length: 262  Bit Score: 77.16  E-value: 1.93e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14070   4 YLIGRKLGEGSFAKVREGLHAVTGEKVAIKVIdkkKAKKDSYVTkNLRREGRIQQMIRHPNITQLLDILETENSYYLVME 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS--AQIGATLARRL 170
Cdd:cd14070  84 LCPGGNLMHRIYDKKRLEEREARRYIRQLVSAVEHLHRAGVVHRDLKIENLLLDENDNIKLIDFGLSncAGILGYSDPFS 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVlflmtKSGYQPPRLKE----KGKWSAA 246
Cdd:cd14070 164 TQCGSPAYAAPELLA---RKKYGPKVDVWSIGVNMYAMLTGTLP-FTVEPFSL-----RALHQKMVDKEmnplPTDLSPG 234
                       250       260
                ....*....|....*....|....*.
gi 6005810  247 FHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14070 235 AISFLRSLLEPDPLKRPNIKQALANR 260
PTKc_Src cd05071
Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the ...
13-264 2.01e-15

Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) PTK, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. The Src subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270656 [Multi-domain]  Cd Length: 277  Bit Score: 77.42  E-value: 2.01e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDddvsTLQKEILILKTCRHANIVAYHgSYLWLQKLWI 89
Cdd:cd05071   7 PRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKpgtMSPE----AFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQ-VTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GAT 165
Cdd:cd05071  81 VTEYMSKGSLLDFLKgEMGKYLRLpQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIedNEY 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRlsfiGTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgk 242
Cdd:cd05071 161 TARQ----GAKFpikWTAPE---AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--- 230
                       250       260
                ....*....|....*....|..
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05071 231 CPESLHDLMCQCWRKEPEERPT 252
STKc_KSR1 cd14152
Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the ...
18-281 2.16e-15

Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. KSR1 functions as a transducer of TNFalpha-stimulated C-Raf activation of ERK1/2 and NF-kB. Detected activity of KSR1 is cell type specific and context dependent. It is inactive in normal colon epithelial cells and becomes activated at the onset of inflammatory bowel disease (IBD). Similarly, KSR1 activity is undetectable prior to stimulation by EGF or ceramide in COS-7 or YAMC cells, respectively. KSR proteins are widely regarded as pseudokinases, however, this matter is up for debate as catalytic activity has been detected for KSR1 in some systems. The KSR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271054 [Multi-domain]  Cd Length: 279  Bit Score: 77.32  E-value: 2.16e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   18 DLLQRLGGGTYGEVFKARdkVSGDlVALKMVKMEPD--DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd14152   3 ELGELIGQGRWGKVHRGR--WHGE-VAIRLLEIDGNnqDHLKLFKKEVMNYRQTRHENVVLFMGACMHPPHLAIITSFCK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQ-VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILInDAGEVRLADFGISAQIGATL-ARRLSFI 173
Cdd:cd14152  80 GRTLYSFVRdPKTSLDINKTRQIAQEIIKGMGYLHAKGIVHKDLKSKNVFY-DNGKVVITDFGLFGISGVVQeGRRENEL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  174 GTP----YWMAPEVAAVALKGG------YNELCDIWSLGITAIELAELQPPLFDvHPLRVLFLMTKSGYQPPRLKEKGKW 243
Cdd:cd14152 159 KLPhdwlCYLAPEIVREMTPGKdedclpFSKAADVYAFGTIWYELQARDWPLKN-QPAEALIWQIGSGEGMKQVLTTISL 237
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 6005810  244 SAAFHNFIKVTLTKSPKKRPSATkMLSHQLVSQPGLNR 281
Cdd:cd14152 238 GKEVTEILSACWAFDLEERPSFT-LLMDMLEKLPKLNR 274
STKc_JNK3 cd07874
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the ...
17-208 2.50e-15

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in JNK3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143379 [Multi-domain]  Cd Length: 355  Bit Score: 78.59  E-value: 2.50e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVSTLQKEILILKTCRHANIVAYHGSYL------WLQKLW 88
Cdd:cd07874  19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSrpFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTpqksleEFQDVY 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR 168
Cdd:cd07874  99 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  169 RlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd07874 176 T-PYVVTRYYRAPE---VILGMGYKENVDIWSVGCIMGEM 211
STKc_PIM cd14005
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
16-272 2.60e-15

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 and three PIM2 isoforms as a result of alternative translation initiation sites, while there is only one PIM3 protein. Compound knockout mice deficient of all three PIM kinases that survive the perinatal period show a profound reduction in body size, indicating that PIMs are important for body growth. The PIM subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270907 [Multi-domain]  Cd Length: 255  Bit Score: 76.51  E-value: 2.60e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD------DDVSTLQKEILILKTC---RHANIV------AYHGS 80
Cdd:cd14005   1 QYEVGDLLGKGGFGTVYSGVRIRDGLPVAVKFVPKSRVtewamiNGPVPVPLEIALLLKAskpGVPGVIrlldwyERPDG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   81 YLwlqklwICMEFcgAGSLQDIYQ---VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADF 156
Cdd:cd14005  81 FL------LIMER--PEPCQDLFDfitERGALSENLARIIFRQVVEAVRHCHQRGVLHRDIKDENLLINlRTGEVKLIDF 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  157 GisaqIGATLARRL--SFIGTPYWMAPEvaaVALKGGYNEL-CDIWSLGITAIELAELQPPLFdvhplRVLFLMTKSGYQ 233
Cdd:cd14005 153 G----CGALLKDSVytDFDGTRVYSPPE---WIRHGRYHGRpATVWSLGILLYDMLCGDIPFE-----NDEQILRGNVLF 220
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  234 PPRlkekgkWSAAFHNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14005 221 RPR------LSKECCDLISRCLQFDPSKRPSLEQILSHP 253
STKc_Cdc7 cd14019
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze ...
15-271 2.69e-15

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Cdc7 kinase (or Hsk1 in fission yeast) is a critical regulator in the initiation of DNA replication. It forms a complex with a Dbf4-related regulatory subunit, a cyclin-like molecule that activates the kinase in late G1 phase, and is also referred to as Dbf4-dependent kinase (DDK). Its main targets are mini-chromosome maintenance (MCM) proteins. Cdc7 kinase may also have additional roles in meiosis, checkpoint responses, the maintenance and repair of chromosome structures, and cancer progression. The Cdc7 kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270921 [Multi-domain]  Cd Length: 252  Bit Score: 76.49  E-value: 2.69e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDK-------VSGDLVALKmvKMEPDDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQK 86
Cdd:cd14019   1 NKYRIIEKIGEGTFSSVYKAEDKlhdlydrNKGRLVALK--HIYPTSSPSRILNELECLERLGgSNNVSGLITAFRNEDQ 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQvTGSLSELQIsYVcREVLQGLAYLHSQKKIHRDIKGANILIN-DAGEVRLADFGISAQIGAT 165
Cdd:cd14019  79 VVAVLPYIEHDDFRDFYR-KMSLTDIRI-YL-RNLFKALKHVHSFGIIHRDVKPGNFLYNrETGKGVLVDFGLAQREEDR 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSFIGTPYWMAPEV--------AAValkggynelcDIWSLGITAIE-LAELQPPLFDVHPLRVLF-LMTKSGyqpp 235
Cdd:cd14019 156 PEQRAPRAGTRGFRAPEVlfkcphqtTAI----------DIWSAGVILLSiLSGRFPFFFSSDDIDALAeIATIFG---- 221
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  236 rlkekgkWSAAFHnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14019 222 -------SDEAYD-LLDKLLELDPSKRITAEEALKH 249
STKc_ROCK1 cd05622
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
11-216 3.01e-15

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270772 [Multi-domain]  Cd Length: 405  Bit Score: 78.89  E-value: 3.01e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   11 RDPR---DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWL 84
Cdd:cd05622  66 RDLRmkaEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLskfEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 145
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQvTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA 164
Cdd:cd05622 146 RYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 224
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  165 T-LARRLSFIGTPYWMAPEVaaVALKGG---YNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05622 225 EgMVRCDTAVGTPDYISPEV--LKSQGGdgyYGRECDWWSVGVFLYEMLVGDTPFY 278
PTKc_Hck cd05073
Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the ...
13-236 3.01e-15

Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of G-CSF-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes. Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Hck subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270658 [Multi-domain]  Cd Length: 265  Bit Score: 76.60  E-value: 3.01e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSGDlVALKMvkMEPDD-DVSTLQKEILILKTCRHANIVAYHgSYLWLQKLWICM 91
Cdd:cd05073   9 PRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKT--MKPGSmSVEAFLAEANVMKTLQHDKLVKLH-AVVTKEPIYIIT 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQV-TGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLA 167
Cdd:cd05073  85 EFMAKGSLLDFLKSdEGSKQPLpKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIedNEYTA 164
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  168 RRlsfiGTPY---WMAPEVAAValkGGYNELCDIWSLGITAIELAEL----QPPLFDVHPLRVLflmtKSGYQPPR 236
Cdd:cd05073 165 RE----GAKFpikWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYgripYPGMSNPEVIRAL----ERGYRMPR 229
PTKc_RET cd05045
Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs ...
23-264 3.09e-15

Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor PTK (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma. The RET subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173631 [Multi-domain]  Cd Length: 290  Bit Score: 77.31  E-value: 3.09e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA-----RDKVSGDLVALKMVKMEPDD-DVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05045   8 LGEGEFGKVVKAtafrlKGRAGYTTVAVKMLKENASSsELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVT--------GSLSELQISYV----------------CREVLQGLAYLHSQKKIHRDIKGANILINDAGEVR 152
Cdd:cd05045  88 GSLRSFLRESrkvgpsylGSDGNRNSSYLdnpderaltmgdlisfAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMK 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  153 LADFGISAQI---GATLARRLSFIGTPyWMAPEVAAVALkggYNELCDIWSLGITAIELAEL-QPPLFDVHPLRvLFLMT 228
Cdd:cd05045 168 ISDFGLSRDVyeeDSYVKRSKGRIPVK-WMAIESLFDHI---YTTQSDVWSFGVLLWEIVTLgGNPYPGIAPER-LFNLL 242
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  229 KSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05045 243 KTGY---RMERPENCSEEMYNLMLTCWKQEPDKRPT 275
STKc_JNK1 cd07875
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the ...
17-202 4.22e-15

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK1 is expressed in every cell and tissue type. It specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in JNK1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Initially, it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143380 [Multi-domain]  Cd Length: 364  Bit Score: 77.78  E-value: 4.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVK--MEPDDDVSTLQKEILILKTCRHANIVAY------HGSYLWLQKLW 88
Cdd:cd07875  26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSrpFQNQTHAKRAYRELVLMKCVNHKNIIGLlnvftpQKSLEEFQDVY 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLAR 168
Cdd:cd07875 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
                       170       180       190
                ....*....|....*....|....*....|....
gi 6005810  169 RlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLG 202
Cdd:cd07875 183 T-PYVVTRYYRAPE---VILGMGYKENVDIWSVG 212
STKc_MAPKAPK3 cd14172
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
15-271 6.03e-15

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 3 (MAPKAP3 or MK3) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK3 is a bonafide substrate for the MAPK p38. It is closely related to MK2 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK3 activity is only significant when MK2 is absent. The MK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271074 [Multi-domain]  Cd Length: 267  Bit Score: 75.80  E-value: 6.03e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQR-LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDD--------VSTLQKEILILKTcrHANIvaYHGSylwlQ 85
Cdd:cd14172   3 DDYKLSKQvLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARrevehhwrASGGPHIVHILDV--YENM--HHGK----R 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAGSLQDIYQVTG--SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISA 160
Cdd:cd14172  75 CLLIIMECMEGGELFSRIQERGdqAFTEREASEIMRDIGTAIQYLHSMNIAHRDVKPENLLYtskEKDAVLKLTDFGFAK 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 QIGATLARRLSFIgTPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFD-----VHP-LRVLFLMTKSGYQP 234
Cdd:cd14172 155 ETTVQNALQTPCY-TPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGFPPFYSntgqaISPgMKRRIRMGQYGFPN 230
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 6005810  235 PRLKEKgkwSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14172 231 PEWAEV---SEEAKQLIRHLLKTDPTERMTITQFMNH 264
PTKc_Itk cd05112
Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs ...
12-273 7.22e-15

Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk, also known as Tsk or Emt, is a member of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. The Itk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133243 [Multi-domain]  Cd Length: 256  Bit Score: 75.37  E-value: 7.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   12 DPrDHYDLLQRLGGGTYGEVFKARdKVSGDLVALKMVK---MEPDDdvstLQKEILILKTCRHANIVAYHGSYLWLQKLW 88
Cdd:cd05112   2 DP-SELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIRegaMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPIC 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQDIYQVT-GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATla 167
Cdd:cd05112  76 LVFEFMEHGCLSDYLRTQrGLFSAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD-- 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  168 RRLSFIGTPY---WMAPEVAAValkGGYNELCDIWSLGITAIEL-AELQPPLFD------VHPLRVLFLMTKsgyqpPRL 237
Cdd:cd05112 154 QYTSSTGTKFpvkWSSPEVFSF---SRYSSKSDVWSFGVLMWEVfSEGKIPYENrsnsevVEDINAGFRLYK-----PRL 225
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  238 KEKGKWSAAFHNFikvtlTKSPKKRPSATKMLsHQL 273
Cdd:cd05112 226 ASTHVYEIMNHCW-----KERPEDRPSFSLLL-RQL 255
PTKc_Wee1 cd14051
Catalytic domain of the Protein Tyrosine Kinase, Wee1; PTKs catalyze the transfer of the ...
20-271 8.65e-15

Catalytic domain of the Protein Tyrosine Kinase, Wee1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Wee1 is a nuclear cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. There are two distinct Wee1 proteins in vertebrates showing different expression patterns, called Wee1a and Wee1b. They are functionally dstinct and are implicated in different steps of egg maturation and embryo development. The Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270953 [Multi-domain]  Cd Length: 275  Bit Score: 75.52  E-value: 8.65e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKmEPdddVSTLQKEILILK-TCRHA------NIVAYHGSYLWLQKLWICME 92
Cdd:cd14051   5 VEKIGSGEFGSVYKCINRLDGCVYAIKKSK-KP---VAGSVDEQNALNeVYAHAvlgkhpHVVRYYSAWAEDDHMIIQNE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDI----YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIN---------------DAGEVRL 153
Cdd:cd14051  81 YCNGGSLADAisenEKAGERFSEAELKDLLLQVAQGLKYIHSQNLVHMDIKPGNIFISrtpnpvsseeeeedfEGEEDNP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  154 ADFGISAQIGaTLARRLSfIGTPY-------WMAPEVaavaLKGGYNEL--CDIWSLGITAIELA---ELQPPLFDVHPL 221
Cdd:cd14051 161 ESNEVTYKIG-DLGHVTS-ISNPQveegdcrFLANEI----LQENYSHLpkADIFALALTVYEAAgggPLPKNGDEWHEI 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 6005810  222 RvlflmtkSGYQPPRlkekGKWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14051 235 R-------QGNLPPL----PQCSPEFNELLRSMIHPDPEKRPSAAALLQH 273
PTKc_Tec_like cd05059
Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
19-208 9.51e-15

Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Tec-like subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nonreceptor PTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. Tec kinases play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). The Tec-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173637 [Multi-domain]  Cd Length: 256  Bit Score: 75.18  E-value: 9.51e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKARDKVSGDlVALKMVK---MEPDDDVstlqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05059   8 FLKELGSGQFGVVHLGKWRGKID-VAIKMIKegsMSEDDFI----EEAKVMMKLSHPKLVQLYGVCTKQRPIFIVTEYMA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARRL---- 170
Cdd:cd05059  83 NGCLLNyLRERRGKFQTEQLLEMCKDVCEAMEYLESNGFIHRDLAARNCLVGEQNVVKVSDFG--------LARYVldde 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 6005810  171 --SFIGTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05059 155 ytSSVGTKFpvkWSPPE---VFMYSKFSSKSDVWSFGVLMWEV 194
STKc_LRRK2 cd14068
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze ...
23-268 1.04e-14

Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK2 is one of two vertebrate LRRKs which show complementary expression in the brain. Mutations in LRRK2, found in the kinase, ROC-COR, and WD40 domains, are linked to both familial and sporadic forms of Parkinson's disease. The most prevalent mutation, G2019S located in the activation loop of the kinase domain, increases kinase activity. The R1441C/G mutations in the GTPase domain have also been reported to influence kinase activity. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270970 [Multi-domain]  Cd Length: 252  Bit Score: 74.99  E-value: 1.04e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEPDddVSTLQKEILILKTCRHANIVAYHGSYLWLQKLwiCMEFCGAGSLQDI 102
Cdd:cd14068   2 LGDGGFGSVYRAVYR--GEDVAVKIFNKHTS--FRLLRQELVVLSHLHHPSLVALLAAGTAPRML--VMELAPKGSLDAL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-----NDAGEVRLADFGIsAQIGATLARRLSfIGTP 176
Cdd:cd14068  76 LQQdNASLTRTLQHRIALHVADGLRYLHSAMIIYRDLKPHNVLLftlypNCAIIAKIADYGI-AQYCCRMGIKTS-EGTP 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVAavalKGG--YNELCDIWSLGITAIELAELQ---------PPLFDVhplrvlflMTKSGYQPPRLKEKG--KW 243
Cdd:cd14068 154 GFRAPEVA----RGNviYNQQADVYSFGLLLYDILTCGeriveglkfPNEFDE--------LAIQGKLPDPVKEYGcaPW 221
                       250       260
                ....*....|....*....|....*
gi 6005810  244 sAAFHNFIKVTLTKSPKKRPSATKM 268
Cdd:cd14068 222 -PGVEALIKDCLKENPQCRPTSAQV 245
PTKc_ALK_LTK cd05036
Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte ...
13-203 1.05e-14

Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor PTKs (RTKs) whose ligands are not yet well-defined. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The ALK/LTK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270632 [Multi-domain]  Cd Length: 277  Bit Score: 75.12  E-value: 1.05e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDK-VSGDLVALKM-VKMEP----DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd05036   4 PRKNLTLIRALGQGAFGEVYEGTVSgMPGDPSPLQVaVKTLPelcsEQDEMDFLMEALIMSKFNHPNIVRCIGVCFQRLP 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQ----DIYQVTGSLSELQIS---YVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADF 156
Cdd:cd05036  84 RFILLELMAGGDLKsflrENRPRPEQPSSLTMLdllQLAQDVAKGCRYLEENHFIHRDIAARNCLLTCKGPgrvAKIGDF 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6005810  157 GISAQI-GATLARRLSFIGTPY-WMAPEvaaVALKGGYNELCDIWSLGI 203
Cdd:cd05036 164 GMARDIyRADYYRKGGKAMLPVkWMPPE---AFLDGIFTSKTDVWSFGV 209
STKc_MRCK_alpha cd05623
Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 ...
14-216 1.11e-14

Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-alpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270773 [Multi-domain]  Cd Length: 409  Bit Score: 76.98  E-value: 1.11e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd05623  71 KEDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILnkwEMLKRAETACFREERDVLVNGDSQWITTLHYAFQDDNNLYLV 150
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIY-QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLA 167
Cdd:cd05623 151 MDYYVGGDLLTLLsKFEDRLPEDMARFYLAEMVLAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLmeDGTVQ 230
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  168 RRLSfIGTPYWMAPEV--AAVALKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05623 231 SSVA-VGTPDYISPEIlqAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY 280
STKc_DMPK_like cd05597
Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; ...
15-216 1.23e-14

Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. Three isoforms of MRCK are known, named alpha, beta and gamma. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270748 [Multi-domain]  Cd Length: 331  Bit Score: 75.85  E-value: 1.23e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKE--ILILKTCRHanIVAYHGSYLWLQKLWI 89
Cdd:cd05597   1 DDFEILKVIGRGAFGEVAVVKLKSTEKVYAMKILnkwEMLKRAETACFREErdVLVNGDRRW--ITKLHYAFQDENYLYL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEF-CGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT-LA 167
Cdd:cd05597  79 VMDYyCGGDLLTLLSKFEDRLPEEMARFYLAEMVLAIDSIHQLGYVHRDIKPDNVLLDRNGHIRLADFGSCLKLREDgTV 158
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  168 RRLSFIGTPYWMAPEV--AAVALKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05597 159 QSSVAVGTPDYISPEIlqAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209
STKc_PDIK1L cd13977
Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs ...
17-265 1.36e-14

Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDIK1L is also called STK35 or CLIK-1. It is predominantly a nuclear protein which is capable of autophosphorylation. Through its interaction with the PDZ-LIM protein CLP-36, it is localized to actin stress fibers. The PDIK1L subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270879 [Multi-domain]  Cd Length: 322  Bit Score: 75.67  E-value: 1.36e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTC--RHANIVAY---------------HG 79
Cdd:cd13977   2 YSLIREVGRGSYGVVYEAVVRRTGARVAVKKIRCNAPENVELALREFWALSSIqrQHPNVIQLeecvlqrdglaqrmsHG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   80 S-----YLWLQK----------------LWICMEFCGAGSLQDiYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDI 138
Cdd:cd13977  82 SsksdlYLLLVEtslkgercfdprsacyLWFVMEFCDGGDMNE-YLLSRRPDRQTNTSFMLQLSSALAFLHRNQIVHRDL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  139 KGANILIN---DAGEVRLADFGISaQIGATLARRL------------SFIGTPYWMAPEVaavaLKGGYNELCDIWSLG- 202
Cdd:cd13977 161 KPDNILIShkrGEPILKVADFGLS-KVCSGSGLNPeepanvnkhflsSACGSDFYMAPEV----WEGHYTAKADIFALGi 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  203 --------ITAIElAELQPPLF--------DVHPL-RVLFLMTKSGYQPPrLKEKGKWSAAFHNFIKVTLTKSPKKRPSA 265
Cdd:cd13977 236 iiwamverITFRD-GETKKELLgtyiqqgkEIVPLgEALLENPKLELQIP-LKKKKSMNDDMKQLLRDMLAANPQERPDA 313
PTKc_Musk cd05050
Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the ...
13-213 1.70e-14

Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor PTK (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. The Musk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133181 [Multi-domain]  Cd Length: 288  Bit Score: 74.87  E-value: 1.70e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDK--VSGD---LVALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd05050   3 PRNNIEYVRDIGQGAFGRVFQARAPglLPYEpftMVAVKMLKEEASADMQAdFQREAALMAEFDHPNIVKLLGVCAVGKP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDI------YQVTGS----------------LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANIL 144
Cdd:cd05050  83 MCLLFEYMAYGDLNEFlrhrspRAQCSLshstssarkcglnplpLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6005810  145 INDAGEVRLADFGISAQIGATLARRLS---FIGTpYWMAPEvaaVALKGGYNELCDIWSLGITAIELAE--LQP 213
Cdd:cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASendAIPI-RWMPPE---SIFYNRYTTESDVWAYGVVLWEIFSygMQP 232
STKc_WNK1 cd14030
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 1; STKs catalyze ...
23-234 1.72e-14

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK1 is widely expressed and is most abundant in the testis. In hyperosmotic or hypotonic low-chloride stress conditions, WNK1 is activated and it phosphorylates its substrates including SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. Mutations in WNK1 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK1 negates WNK4-mediated inhibition of the sodium-chloride cotransporter NCC and activates the epithelial sodium channel ENaC by activating SGK1. WNK1 also decreases the surface expression of renal outer medullary potassium channel (ROMK) by stimulating their endocytosis. Hypertension and hyperkalemia in PHAII patients with WNK1 mutations may be due partly to increased activity of NCC and ENaC, and impaired renal potassium secretion by ROMK, respectively. In addition, WNK1 interacts with MEKK2/3 and acts as an activator of extracellular signal-regulated kinase (ERK) 5. It also negatively regulates TGFbeta signaling. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. The WNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270932 [Multi-domain]  Cd Length: 289  Bit Score: 74.70  E-value: 1.72e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVA---LKMVKMEPDDDvSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM----EFCG 95
Cdd:cd14030  33 IGRGSFKTVYKGLDTETTVEVAwceLQDRKLSKSER-QRFKEEAGMLKGLQHPNIVRFYDSWESTVKGKKCIvlvtELMT 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILIND-AGEVRLADFGISAQIGATLARrlSF 172
Cdd:cd14030 112 SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPpiIHRDLKCDNIFITGpTGSVKIGDLGLATLKRASFAK--SV 189
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  173 IGTPYWMAPEVaavaLKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQP 234
Cdd:cd14030 190 IGTPEFMAPEM----YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 247
STKc_MAST cd05609
Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine ...
17-216 1.85e-14

Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also called syntrophin-associated STK (SAST) while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270760 [Multi-domain]  Cd Length: 280  Bit Score: 74.75  E-value: 1.85e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEF 93
Cdd:cd05609   2 FETIKLISNGAYGAVYLVRHRETRQRFAMKKInkqNLILRNQIQQVFVERDILTFAENPFVVSMYCSFETKRHLCMVMEY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQVTGSLS-ELQISYVCREVLqGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISaQIG-ATLARRL- 170
Cdd:cd05609  82 VEGGDCATLLKNIGPLPvDMARMYFAETVL-ALEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLS-KIGlMSLTTNLy 159
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 --------------SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLF 216
Cdd:cd05609 160 eghiekdtrefldkQVCGTPEYIAPE---VILRQGYGKPVDWWAMGIILYEFLVGCVPFF 216
STKc_LATS1 cd05625
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor 1; STKs catalyze the ...
20-238 1.95e-14

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS1 functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. The LATS1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270775 [Multi-domain]  Cd Length: 382  Bit Score: 75.85  E-value: 1.95e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05625   6 IKTLGIGAFGEVCLARKVDTKALYATKTLRKKDvllRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAT----------- 165
Cdd:cd05625  86 GDMMSLLIRMGVFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWThdskyyqsgdh 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 --------------------------LARRL----------SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELA 209
Cdd:cd05625 166 lrqdsmdfsnewgdpencrcgdrlkpLERRAarqhqrclahSLVGTPNYIAPE---VLLRTGYTQLCDWWSVGVILFEML 242
                       250       260       270
                ....*....|....*....|....*....|..
gi 6005810  210 ELQPPLFDVHPLRVLFLMTK---SGYQPPRLK 238
Cdd:cd05625 243 VGQPPFLAQTPLETQMKVINwqtSLHIPPQAK 274
STKc_IKK_alpha cd14039
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
23-221 2.13e-14

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKalpha is involved in the non-canonical or alternative pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The non-canonical pathway functions in cells lacking NEMO (NF-kB Essential MOdulator) and IKKbeta. It is induced by a subset of TNFR family members including CD40, RANK, and B cell-activating factor receptor. IKKalpha processes the Inhibitor of NF-kB (IkB)-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus. This pathway is dependent on NIK (NF-kB Inducing Kinase) which phosphorylates and activates IKKalpha. The IKKalpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270941 [Multi-domain]  Cd Length: 289  Bit Score: 74.57  E-value: 2.13e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEpdddVSTLQK-----EILILKTCRHANIVAY-----HGSYLWLQKLWICME 92
Cdd:cd14039   1 LGTGGFGNVCLYQNQETGEKIAIKSCRLE----LSVKNKdrwchEIQIMKKLNHPNVVKAcdvpeEMNFLVNDVPLLAME 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIY---QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV---RLADFGISAQIG-AT 165
Cdd:cd14039  77 YCSGGDLRKLLnkpENCCGLKESQVLSLLSDIGSGIQYLHENKIIHRDLKPENIVLQEINGKivhKIIDLGYAKDLDqGS 156
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  166 LARrlSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGITAIE-LAELQPPLFDVHPL 221
Cdd:cd14039 157 LCT--SFVGTLQYLAPELFE---NKSYTVTVDYWSFGTMVFEcIAGFRPFLHNLQPF 208
STKc_DRAK1 cd14197
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
15-272 2.46e-14

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 (also called STK17A) and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. Rabbit DRAK1 has been shown to induce apoptosis in osteoclasts and overexpressio of human DRAK1 induces apoptosis in cultured fibroblast cells. DRAK1 may be involved in apoptotic signaling. The DRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271099 [Multi-domain]  Cd Length: 271  Bit Score: 74.20  E-value: 2.46e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLL--QRLGGGTYGEVFKARDKVSGDLVALK-MVKMEPDDDVST-LQKEILILKTCR-HANIVAYHGSYLWLQKLWI 89
Cdd:cd14197   7 ERYSLSpgRELGRGKFAVVRKCVEKDSGKEFAAKfMRKRRKGQDCRMeIIHEIAVLELAQaNPWVINLHEVYETASEMIL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSL--QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDA---GEVRLADFGISAQIGA 164
Cdd:cd14197  87 VLEYAAGGEIfnQCVADREEAFKEKDVKRLMKQILEGVSFLHNNNVVHLDLKPQNILLTSEsplGDIKIVDFGLSRILKN 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRlSFIGTPYWMAPEVAAvalkggYNEL---CDIWSLGITA-IELAELQPPLFDVHPLRVLFL----MTKSGYQPPR 236
Cdd:cd14197 167 SEELR-EIMGTPEYVAPEILS------YEPIstaTDMWSIGVLAyVMLTGISPFLGDDKQETFLNIsqmnVSYSEEEFEH 239
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  237 LKEkgkwSAAfhNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14197 240 LSE----SAI--DFIKTLLIKKPENRATAEDCLKHP 269
STKc_NDR_like_fungal cd05629
Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Serine/Threonine Kinases; STKs ...
15-214 2.55e-14

Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension.The fungal NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270778 [Multi-domain]  Cd Length: 377  Bit Score: 75.66  E-value: 2.55e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMV---KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:cd05629   1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLlksEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA----------- 160
Cdd:cd05629  81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTgfhkqhdsayy 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  161 ----------------------QIGATLA-----------RRL---SFIGTPYWMAPEvaaVALKGGYNELCDIWSLGIT 204
Cdd:cd05629 161 qkllqgksnknridnrnsvavdSINLTMSskdqiatwkknRRLmaySTVGTPDYIAPE---IFLQQGYGQECDWWSLGAI 237
                       250
                ....*....|
gi 6005810  205 AIELAELQPP 214
Cdd:cd05629 238 MFECLIGWPP 247
STKc_BMPR1 cd14144
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; ...
21-221 2.81e-14

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1 functions as a receptor for morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Vertebrates contain two type I BMP receptors, BMPR1a and BMPR1b. BMPR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that also includes TGFbeta, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271046 [Multi-domain]  Cd Length: 287  Bit Score: 74.05  E-value: 2.81e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKArdKVSGDLVALKMVKMEPDddvSTLQKEILILKTC--RHANIVAY-----HGSYLWLQkLWICMEF 93
Cdd:cd14144   1 RSVGKGRYGEVWKG--KWRGEKVAVKIFFTTEE---ASWFRETEIYQTVlmRHENILGFiaadiKGTGSWTQ-LYLITDY 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQV----TGSLSELQISYVCrevlqGLAYLHS-----QKK---IHRDIKGANILINDAGEVRLADFGISAQ 161
Cdd:cd14144  75 HENGSLYDFLRGntldTQSMLKLAYSAAC-----GLAHLHTeifgtQGKpaiAHRDIKSKNILVKKNGTCCIADLGLAVK 149
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  162 I-----GATLARRlSFIGTPYWMAPEVAAVALKGGYNE---LCDIWSLGITAIELA----------ELQPPLFDVHPL 221
Cdd:cd14144 150 FisetnEVDLPPN-TRVGTKRYMAPEVLDESLNRNHFDaykMADMYSFGLVLWEIArrcisggiveEYQLPYYDAVPS 226
PTKc_Syk_like cd05060
Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
22-207 3.16e-14

Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Syk-like subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. The Syk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270650 [Multi-domain]  Cd Length: 257  Bit Score: 73.54  E-value: 3.16e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKA---RDKVSGDLVALKMVKmepDDDVSTLQKEIL----ILKTCRHANIVAYHGsylwlqklwIC---- 90
Cdd:cd05060   2 ELGHGNFGSVRKGvylMKSGKEVEVAVKTLK---QEHEKAGKKEFLreasVMAQLDHPCIVRLIG---------VCkgep 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 ----MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGAtl 166
Cdd:cd05060  70 lmlvMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGA-- 147
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  167 arrlsfiGTPY------------WMAPEVAAValkGGYNELCDIWSLGITAIE 207
Cdd:cd05060 148 -------GSDYyrattagrwplkWYAPECINY---GKFSSKSDVWSYGVTLWE 190
PK_GC cd13992
Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows ...
40-265 4.26e-14

Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270894 [Multi-domain]  Cd Length: 268  Bit Score: 73.19  E-value: 4.26e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   40 GDLVALKMVKMEPDDDVSTLQkEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQVTG-SL-SELQISYV 117
Cdd:cd13992  25 GRTVAIKHITFSRTEKRTILQ-ELNQLKELVHDNLNKFIGICINPPNIAVVTEYCTRGSLQDVLLNREiKMdWMFKSSFI 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  118 cREVLQGLAYLHSQKKI-HRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFIGTPY---WMAPE-------VAAV 186
Cdd:cd13992 104 -KDIVKGMNYLHSSSIGyHGRLKSSNCLVDSRWVVKLTDFGLRNLLEEQTNHQLDEDAQHKkllWTAPEllrgsllEVRG 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  187 ALKGgynelcDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIkVTLTK-----SPKK 261
Cdd:cd13992 183 TQKG------DVYSFAIILYEILFRSDP-FALEREVAIVEKVISGGNKPFRPELAVLLDEFPPRL-VLLVKqcwaeNPEK 254

                ....
gi 6005810  262 RPSA 265
Cdd:cd13992 255 RPSF 258
PTZ00426 PTZ00426
cAMP-dependent protein kinase catalytic subunit; Provisional
5-223 4.37e-14

cAMP-dependent protein kinase catalytic subunit; Provisional


Pssm-ID: 173616 [Multi-domain]  Cd Length: 340  Bit Score: 74.25  E-value: 4.37e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810     5 DPDIFNRDPRDHYDLLQRLGGGTYGEVFKARDKvSGDL--VALK------MVKMEPDDDVSTLQKeilILKTCRHANIVA 76
Cdd:PTZ00426  20 EPKRKNKMKYEDFNFIRTLGTGSFGRVILATYK-NEDFppVAIKrfekskIIKQKQVDHVFSERK---ILNYINHPFCVN 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    77 YHGSYLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADF 156
Cdd:PTZ00426  96 LYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDF 175
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810   157 GIsAQIGATlaRRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRV 223
Cdd:PTZ00426 176 GF-AKVVDT--RTYTLCGTPEYIAPE---ILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI 236
STKc_aPKC cd05588
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the ...
23-218 4.57e-14

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270740 [Multi-domain]  Cd Length: 328  Bit Score: 74.38  E-value: 4.57e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTC-RHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05588   3 IGRGSYAKVLMVELKKTKRIYAMKVIKKElvnDDEDIDWVQTEKHVFETAsNHPFLVGLHSCFQTESRLFFVIEFVNGGD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQ---IGATLArrlSFIGT 175
Cdd:cd05588  83 LMFHMQRQRRLPEEHARFYSAEISLALNFLHEKGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEglrPGDTTS---TFCGT 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  176 PYWMAPEVaavaLKG-GYNELCDIWSLGITAIELAELQPPlFDV 218
Cdd:cd05588 160 PNYIAPEI----LRGeDYGFSVDWWALGVLMFEMLAGRSP-FDI 198
PHA03212 PHA03212
serine/threonine kinase US3; Provisional
119-217 1.08e-13

serine/threonine kinase US3; Provisional


Pssm-ID: 165478 [Multi-domain]  Cd Length: 391  Bit Score: 73.88  E-value: 1.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   119 REVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA-QIGATLARRLSFIGTPYWMAPEVAAvalKGGYNELCD 197
Cdd:PHA03212 189 RSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACfPVDINANKYYGWAGTIATNAPELLA---RDPYGPAVD 265
                         90       100
                 ....*....|....*....|
gi 6005810   198 IWSLGITAIELAELQPPLFD 217
Cdd:PHA03212 266 IWSAGIVLFEMATCHDSLFE 285
PTKc_EGFR_like cd05057
Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs ...
20-208 1.15e-13

Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270648 [Multi-domain]  Cd Length: 279  Bit Score: 72.06  E-value: 1.15e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDL----VALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGsylwlqklwICM--- 91
Cdd:cd05057  12 GKVLGSGAFGTVYKGVWIPEGEKvkipVAIKVLREETGPKANEeILDEAYVMASVDHPHLVRLLG---------ICLssq 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 -----EFCGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigat 165
Cdd:cd05057  83 vqlitQLMPLGCLLDyVRNHRDNIGSQLLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPNHVKITDFG-------- 154
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  166 LARRLSFIGTPY----------WMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05057 155 LAKLLDVDEKEYhaeggkvpikWMALE---SIQYRIYTHKSDVWSYGVTVWEL 204
STKc_GRK7 cd05607
Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; ...
23-217 1.43e-13

Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK7 (also called iodopsin kinase) belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270758 [Multi-domain]  Cd Length: 286  Bit Score: 72.24  E-value: 1.43e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMV-----KMEPDDDVSTLQKEILilKTCRHANIVAYHGSYLWLQKLWICMEFCGAG 97
Cdd:cd05607  10 LGKGGFGEVCAVQVKNTGQMYACKKLdkkrlKKKSGEKMALLEKEIL--EKVNSPFIVSLAYAFETKTHLCLVMSLMNGG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQ-DIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI--GATLARRlsfI 173
Cdd:cd05607  88 DLKyHIYNVgERGIEMERVIFYSAQITCGILHLHSLKIVYRDMKPENVLLDDNGNCRLSDLGLAVEVkeGKPITQR---A 164
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  174 GTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFD 217
Cdd:cd05607 165 GTNGYMAPE---ILKEESYSYPVDWFAMGCSIYEMVAGRTPFRD 205
STKc_TSSK3-like cd14163
Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs ...
17-271 1.50e-13

Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. Its mRNA levels is low at birth, increases at puberty, and remains high throughout adulthood. The TSSK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271065 [Multi-domain]  Cd Length: 257  Bit Score: 71.56  E-value: 1.50e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMV-KM-EPDDDVST-LQKEILILKTCRHANIVAYhgsYLWLQ----KLWI 89
Cdd:cd14163   2 YQLGKTIGEGTYSKVKEAFSKKHQRKVAIKIIdKSgGPEEFIQRfLPRELQIVERLDHKNIIHV---YEMLEsadgKIYL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINdAGEVRLADFGISAQIGATlARR 169
Cdd:cd14163  79 VMELAEDGDVFDCVLHGGPLPEHRAKALFRQLVEAIRYCHGCGVAHRDLKCENALLQ-GFTLKLTDFGFAKQLPKG-GRE 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LS--FIGTPYWMAPEVaavaLKGGYNE--LCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEkgkwSA 245
Cdd:cd14163 157 LSqtFCGSTAYAAPEV----LQGVPHDsrKGDIWSMGVVLYVMLCAQLPFDDTDIPKMLCQQQKGVSLPGHLGV----SR 228
                       250       260
                ....*....|....*....|....*.
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14163 229 TCQDLLKRLLEPDMVLRPSIEEVSWH 254
STKc_CDC2L6 cd07867
Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the ...
22-213 1.51e-13

Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270850 [Multi-domain]  Cd Length: 318  Bit Score: 72.41  E-value: 1.51e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL-------WL------QKLW 88
Cdd:cd07867   9 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLshsdrkvWLlfdyaeHDLW 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQdiyQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQIGA 164
Cdd:cd07867  89 HIIKFHRASKAN---KKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVmgegPERGRVKIADMGFARLFNS 165
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  165 ---TLARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQP 213
Cdd:cd07867 166 plkPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSEP 215
PTKc_PDGFR cd05055
Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; ...
13-264 1.72e-13

Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. The PDGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 133186 [Multi-domain]  Cd Length: 302  Bit Score: 72.13  E-value: 1.72e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKA------RDKVSGDlVALKMVKMEPD-DDVSTLQKEILILKTC-RHANIVAYHGSYLWL 84
Cdd:cd05055  33 PRNNLSFGKTLGAGAFGKVVEAtayglsKSDAVMK-VAVKMLKPTAHsSEREALMSELKIMSHLgNHENIVNLLGACTIG 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSL-------QDIYQVTGSLseLQISYvcrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd05055 112 GPILVITEYCCYGDLlnflrrkRESFLTLEDL--LSFSY---QVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 ISAQI---GATLARRLSFIGTPyWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFL-MTKSGYq 233
Cdd:cd05055 187 LARDImndSNYVVKGNARLPVK-WMAPE---SIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYkLIKEGY- 261
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  234 ppRLKEKGKWSAAFHNFIKVTLTKSPKKRPS 264
Cdd:cd05055 262 --RMAQPEHAPAEIYDIMKTCWDADPLKRPT 290
STKc_Mnk1 cd14174
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
15-274 1.83e-13

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271076 [Multi-domain]  Cd Length: 289  Bit Score: 71.98  E-value: 1.83e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLL-QRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCR-HANIVAYHGSYLWLQKLWICME 92
Cdd:cd14174   1 DLYRLTdELLGEGAYAKVQGCVSLQNGKEYAVKIIEKNAGHSRSRVFREVETLYQCQgNKNILELIEFFEDDTRFYLVFE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI---NDAGEVRLADFGISAqiGATLARR 169
Cdd:cd14174  81 KLRGGSILAHIQKRKHFNEREASRVVRDIASALDFLHTKGIAHRDLKPENILCespDKVSPVKICDFDLGS--GVKLNSA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIGTP---------YWMAPEVAAVALKGG--YNELCDIWSLGITAIELAELQPPlFDVH-----------PLRV---- 223
Cdd:cd14174 159 CTPITTPelttpcgsaEYMAPEVVEVFTDEAtfYDKRCDLWSLGVILYIMLSGYPP-FVGHcgtdcgwdrgeVCRVcqnk 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  224 LFLMTKSG-YQPPRlKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLV 274
Cdd:cd14174 238 LFESIQEGkYEFPD-KDWSHISSEAKDLISKLLVRDAKERLSAAQVLQHPWV 288
PK_Unc-89_rpt1 cd14109
Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein ...
14-271 2.12e-13

Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The pseudokinase domain may function as a regulatory domain or a protein interaction domain. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271011 [Multi-domain]  Cd Length: 255  Bit Score: 71.00  E-value: 2.12e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQR-LGGGTYGEVFKARDKVSGDLVALKMVKMEPdddvsTLQKEILILKTCRHANIVAYHGSYLWLQK---LWI 89
Cdd:cd14109   2 RELYEIGEEdEKRAAQGAPFHVTERSTGRNFLAQLRYGDP-----FLMREVDIHNSLDHPNIVQMHDAYDDEKLavtVID 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDaGEVRLADFGISAQIGATLARR 169
Cdd:cd14109  77 NLASTIELVRDNLLPGKDYYTERQVAVFVRQLLLALKHMHDLGIAHLDLRPEDILLQD-DKLKLADFGQSRRLLRGKLTT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSFiGTPYWMAPEVAAvalKGGYNELCDIWSLG-ITAIELAELQPPLFDVHplRVLFLMTKSGYQPPRLKEKGKWSAAFH 248
Cdd:cd14109 156 LIY-GSPEFVSPEIVN---SYPVTLATDMWSVGvLTYVLLGGISPFLGDND--RETLTNVRSGKWSFDSSPLGNISDDAR 229
                       250       260
                ....*....|....*....|...
gi 6005810  249 NFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14109 230 DFIKKLLVYIPESRLTVDEALNH 252
PTKc_Tie cd05047
Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
23-269 2.21e-13

Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins, consisting of Tie1 and Tie2, are receptor PTKs (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. The Tie subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270641 [Multi-domain]  Cd Length: 270  Bit Score: 71.23  E-value: 2.21e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLV--ALKMVK-MEPDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05047   3 IGEGNFGQVLKARIKKDGLRMdaAIKRMKeYASKDDHRDFAGELEVLcKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQ----------------VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS--- 159
Cdd:cd05047  83 LLDFLRksrvletdpafaiansTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSrgq 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 -AQIGATLARrlsfigTPY-WMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYqppRL 237
Cdd:cd05047 163 eVYVKKTMGR------LPVrWMAIESLNYSV---YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RL 230
                       250       260       270
                ....*....|....*....|....*....|..
gi 6005810  238 KEKGKWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05047 231 EKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 262
PTKc_Trk cd05049
Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze ...
13-208 2.53e-13

Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. The Trk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270643 [Multi-domain]  Cd Length: 280  Bit Score: 71.34  E-value: 2.53e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVF-----KARDKVSGDLVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd05049   3 KRDTIVLKRELGEGAFGKVFlgecyNLEPEQDKMLVAVKTLKDASSPDArKDFEREAELLTNLQHENIVKFYGVCTEGDP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIY--------------QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVR 152
Cdd:cd05049  83 LLMVFEYMEHGDLNKFLrshgpdaaflasedSAPGELTLSQLLHIAVQIASGMVYLASQHFVHRDLATRNCLVGTNLVVK 162
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  153 LADFGISAQIGATLARRLSfiGTPY----WMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05049 163 IGDFGMSRDIYSTDYYRVG--GHTMlpirWMPPE---SILYRKFTTESDVWSFGVVLWEI 217
STKc_MAPK4_6 cd07854
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also ...
20-230 2.65e-13

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK4 (also called ERK4 or p63MAPK) and MAPK6 (also called ERK3 or p97MAPK) are atypical MAPKs that are not regulated by MAPK kinases. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143359 [Multi-domain]  Cd Length: 342  Bit Score: 72.12  E-value: 2.65e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIV-AYH-------------GSYLWLQ 85
Cdd:cd07854  10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVkVYEvlgpsgsdltedvGSLTELN 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCGAGSLQDIYQvtGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV-RLADFGISAQIGA 164
Cdd:cd07854  90 SVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVlKIGDFGLARIVDP 167
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  165 TLARR--LSF-IGTPYWMAPEVaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKS 230
Cdd:cd07854 168 HYSHKgyLSEgLVTKWYRSPRL--LLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234
PK_KSR2 cd14153
Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to ...
23-234 3.07e-13

Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR2 interacts with the protein phosphatase calcineurin and functions in calcium-mediated ERK signaling. It also functions in energy metabolism by regulating AMP kinase and AMPK-dependent processes such as glucose uptake and fatty acid oxidation. KSR proteins act as scaffold proteins that function downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases. The KSR2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271055 [Multi-domain]  Cd Length: 270  Bit Score: 70.81  E-value: 3.07e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARdkVSGDlVALKMVKMEPD--DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14153   8 IGKGRFGQVYHGR--WHGE-VAIRLIDIERDneEQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTGSLSEL-QISYVCREVLQGLAYLHSQKKIHRDIKGANILInDAGEVRLADFGISAQIGATLA-RRLSFIGTPY- 177
Cdd:cd14153  85 SVVRDAKVVLDVnKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFTISGVLQAgRREDKLRIQSg 163
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  178 W---MAPEV------AAVALKGGYNELCDIWSLGITAIELAELQPPlFDVHPLRVLFLMTKSGYQP 234
Cdd:cd14153 164 WlchLAPEIirqlspETEEDKLPFSKHSDVFAFGTIWYELHAREWP-FKTQPAEAIIWQVGSGMKP 228
STKc_MAPKAPK5 cd14171
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
15-271 3.21e-13

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 5 (MAPKAP5 or MK5) is also called PRAK (p38-regulated/activated protein kinase). It contains a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271073 [Multi-domain]  Cd Length: 289  Bit Score: 70.95  E-value: 3.21e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLL--QRLGGGTYGEVFKARDKVSGDLVALKMVKmepddDVSTLQKEILILKTCR-HANIV----AYHGSYLW---- 83
Cdd:cd14171   4 EEYEVNwtQKLGTGISGPVRVCVKKSTGERFALKILL-----DRPKARTEVRLHMMCSgHPNIVqiydVYANSVQFpges 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   84 --LQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE---VRLADFGI 158
Cdd:cd14171  79 spRARLLIVMELMEGGELFDRISQHRHFTEKQAAQYTKQIALAVQHCHSLNIAHRDLKPENLLLKDNSEdapIKLCDFGF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  159 sAQIGATLARRLSFigTPYWMAPEVAAV------ALKGG--------YNELCDIWSLGITAIELAELQPPLFDVHPLRVL 224
Cdd:cd14171 159 -AKVDQGDLMTPQF--TPYYVAPQVLEAqrrhrkERSGIptsptpytYDKSCDMWSLGVIIYIMLCGYPPFYSEHPSRTI 235
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  225 flmtksgyqPPRLKEK----------GKWSA---AFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14171 236 ---------TKDMKRKimtgsyefpeEEWSQiseMAKDIVRKLLCVDPEERMTIEEVLHH 286
PTKc_Csk cd05082
Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the ...
19-273 3.41e-13

Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Csk is a cytoplasmic (or nonreceptor) PTK containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. The Csk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133213 [Multi-domain]  Cd Length: 256  Bit Score: 70.40  E-value: 3.41e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKARDKvsGDLVALKMVKMepDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQ-KLWICMEFCGAG 97
Cdd:cd05082  10 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKgGLYIVTEYMAKG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   98 SLQDIYQ-----VTGSLSELQISYvcrEVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATL-ARRLS 171
Cdd:cd05082  86 SLVDYLRsrgrsVLGGDCLLKFSL---DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQdTGKLP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  172 FigtpYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQ-------PPrlkekgkw 243
Cdd:cd05082 163 V----KWTAPE----ALREKkFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKmdapdgcPP-------- 226
                       250       260       270
                ....*....|....*....|....*....|
gi 6005810  244 saAFHNFIKVTLTKSPKKRPSaTKMLSHQL 273
Cdd:cd05082 227 --AVYDVMKNCWHLDAAMRPS-FLQLREQL 253
STK_BAK1_like cd14664
Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; ...
23-214 4.10e-13

Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes three leucine-rich repeat receptor-like kinases (LRR-RLKs): Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1), and Physcomitrella patens CLL1B clavata1-like receptor S/T protein kinase. BAK1 functions in various signaling pathways. It plays a role in BR (brassinosteroid)-regulated plant development as a co-receptor of BRASSINOSTEROID (BR) INSENSITIVE 1 (BRI1), the receptor for BRs, and is required for full activation of BR signaling. It also modulates pathways involved in plant resistance to pathogen infection (pattern-triggered immunity, PTI) and herbivore attack (wound- or herbivore feeding-induced accumulation of jasmonic acid (JA) and JA-isoleucine. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The STK_BAK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271134 [Multi-domain]  Cd Length: 270  Bit Score: 70.60  E-value: 4.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARdKVSGDLVALKMVKMEPDDDVS-TLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQD 101
Cdd:cd14664   1 IGRGGAGTVYKGV-MPNGTLVAVKRLKGEGTQGGDhGFQAEIQTLGMIRHRNIVRLRGYCSNPTTNLLVYEYMPNGSLGE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  102 IYQvTGSLSELQISYVCR-----EVLQGLAYLH---SQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSFI 173
Cdd:cd14664  80 LLH-SRPESQPPLDWETRqrialGSARGLAYLHhdcSPLIIHRDVKSNNILLDEEFEAHVADFGLAKLMDDKDSHVMSSV 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  174 -GTPYWMAPEVAAValkGGYNELCDIWSLGITAIELAELQPP 214
Cdd:cd14664 159 aGSYGYIAPEYAYT---GKVSEKSDVYSYGVVLLELITGKRP 197
STKc_GRK2 cd14223
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs ...
23-215 4.77e-13

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK2, also called beta-adrenergic receptor kinase (beta-ARK) or beta-ARK1, is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRK2 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. TheGRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271125 [Multi-domain]  Cd Length: 321  Bit Score: 70.85  E-value: 4.77e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALK-----MVKMEPDDDVSTLQKEIL-ILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14223   8 IGRGGFGEVYGCRKADTGKMYAMKcldkkRIKMKQGETLALNERIMLsLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlaRRLSFIGTP 176
Cdd:cd14223  88 GDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHSRFVVYRDLKPANILLDEFGHVRISDLGLACDFSKK--KPHASVGTH 165
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 6005810  177 YWMAPEVAAVALkgGYNELCDIWSLGITAIELAELQPPL 215
Cdd:cd14223 166 GYMAPEVLQKGV--AYDSSADWFSLGCMLFKLLRGHSPF 202
PTKc_TrkB cd05093
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B; PTKs catalyze ...
14-208 5.60e-13

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. The TrkB subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270675 [Multi-domain]  Cd Length: 288  Bit Score: 70.45  E-value: 5.60e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   14 RDHYDLLQR-LGGGTYGEVFKA--------RDKVsgdLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWL 84
Cdd:cd05093   3 KRHNIVLKReLGEGAFGKVFLAecynlcpeQDKI---LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICMEFCGAGSLQDIYQVTG-------------SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEV 151
Cdd:cd05093  80 DPLIMVFEYMKHGDLNKFLRAHGpdavlmaegnrpaELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  152 RLADFGISAQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05093 160 KIGDFGMSRDVYSTDYYRVGghTMLPIRWMPPE---SIMYRKFTTESDVWSLGVVLWEI 215
PKc_TNNI3K cd14064
Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; ...
23-235 6.84e-13

Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TNNI3K, also called cardiac ankyrin repeat kinase (CARK), is a cardiac-specific troponin I-interacting kinase that promotes cardiac myogenesis, improves cardiac performance, and protects the myocardium from ischemic injury. It contains N-terminal ankyrin repeats, a catalytic kinase domain, and a C-terminal serine-rich domain. TNNI3K exerts a disease-accelerating effect on cardiac dysfunction and reduced survival in mouse models of cardiomyopathy. The TNNI3K subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270966 [Multi-domain]  Cd Length: 254  Bit Score: 69.48  E-value: 6.84e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKvsGDLVALKMVKMEP---DDDVSTLQKEILILKTCRHANIVAYHGSYLW-LQKLWICMEFCGAGS 98
Cdd:cd14064   1 IGSGSFGKVYKGRCR--NKIVAIKRYRANTycsKSDVDMFCREVSILCRLNHPCVIQFVGACLDdPSQFAIVTQYVSGGS 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGSLSELQISY-VCREVLQGLAYLH--SQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRLSF-IG 174
Cdd:cd14064  79 LFSLLHEQKRVIDLQSKLiIAVDVAKGMEYLHnlTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKqPG 158
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6005810  175 TPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPP 235
Cdd:cd14064 159 NLRWMAPEVFTQCTR--YSIKADVFSYALCLWELLTGEIPFAHLKPAAAAADMAYHHIRPP 217
PTKc_Ror cd05048
Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan ...
19-213 7.68e-13

Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Ror subfamily consists of Ror1, Ror2, and similar proteins. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. The Ror subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270642 [Multi-domain]  Cd Length: 283  Bit Score: 69.71  E-value: 7.68e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKAR-----DKVSGDLVALKMVKMEPDDDVST-LQKEILILKTCRHANIVAYHGSYLWLQKLwiCM- 91
Cdd:cd05048   9 FLEELGEGAFGKVYKGEllgpsSEESAISVAIKTLKENASPKTQQdFRREAELMSDLQHPNIVCLLGVCTKEQPQ--CMl 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 -EFCGAGSLQ----------------DIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLA 154
Cdd:cd05048  87 fEYMAHGDLHeflvrhsphsdvgvssDDDGTASSLDQSDFLHIAIQIAAGMEYLSSHHYVHRDLAARNCLVGDGLTVKIS 166
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  155 DFGISAQI-GATLARRLSFIGTPY-WMAPEvaAVaLKGGYNELCDIWSLGITAIELAE--LQP 213
Cdd:cd05048 167 DFGLSRDIySSDYYRVQSKSLLPVrWMPPE--AI-LYGKFTTESDVWSFGVVLWEIFSygLQP 226
STKc_GRK3 cd05633
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs ...
23-215 8.78e-13

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK3, also called beta-adrenergic receptor kinase 2 (beta-ARK2), is widely expressed in many tissues. It is involved in modulating the cholinergic response of airway smooth muscles, and also plays a role in dopamine receptor regulation. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 promoter polymorphisms may also be associated with bipolar disorder. GRK3 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270781 [Multi-domain]  Cd Length: 346  Bit Score: 70.48  E-value: 8.78e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALK-----MVKMEPDDDVSTLQKEIL-ILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd05633  13 IGRGGFGEVYGCRKADTGKMYAMKcldkkRIKMKQGETLALNERIMLsLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlaRRLSFIGTP 176
Cdd:cd05633  93 GDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTH 170
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEVAAvalKG-GYNELCDIWSLGITAIELAELQPPL 215
Cdd:cd05633 171 GYMAPEVLQ---KGtAYDSSADWFSLGCMLFKLLRGHSPF 207
PTKc_EphR_A2 cd05063
Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the ...
23-208 1.11e-12

Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 133194 [Multi-domain]  Cd Length: 268  Bit Score: 69.23  E-value: 1.11e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGD---LVALKMVKM-EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05063  13 IGAGEFGEVFRGILKMPGRkevAVAIKTLKPgYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 L-QDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-----------GATL 166
Cdd:cd05063  93 LdKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLeddpegtyttsGGKI 172
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 6005810  167 ARRlsfigtpyWMAPEvaAVALKgGYNELCDIWSLGITAIEL 208
Cdd:cd05063 173 PIR--------WTAPE--AIAYR-KFTSASDVWSFGIVMWEV 203
PKc_Dusty cd13975
Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze ...
21-203 1.51e-12

Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Dusty protein kinase is also called Receptor-interacting protein kinase 5 (RIPK5 or RIP5) or RIP-homologous kinase. It is widely distributed in the central nervous system, and may be involved in inducing both caspase-dependent and caspase-independent cell death. The Dusty subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270877 [Multi-domain]  Cd Length: 262  Bit Score: 68.67  E-value: 1.51e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKVSGDLVALKMVkMEPDDD-VSTLQKEILILKTC-RHANIVAYHGSYlwlqklwICMEFCGAGS 98
Cdd:cd13975   6 RELGRGQYGVVYACDSWGGHFPCALKSV-VPPDDKhWNDLALEFHYTRSLpKHERIVSLHGSV-------IDYSYGGGSS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 L----------QDIYQ-VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLA 167
Cdd:cd13975  78 IavllimerlhRDLYTgIKAGLSLEERLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKKNRAKITDLGFCKPEAMMSG 157
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 6005810  168 rrlSFIGTPYWMAPEVaavaLKGGYNELCDIWSLGI 203
Cdd:cd13975 158 ---SIVGTPIHMAPEL----FSGKYDNSVDVYAFGI 186
STKc_RIP2 cd14026
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze ...
20-269 1.65e-12

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP2, also called RICK or CARDIAK, harbors a C-terminal Caspase Activation and Recruitment domain (CARD) belonging to the Death domain (DD) superfamily. It functions as an effector kinase downstream of the pattern recognition receptors from the Nod-like (NLR) family, Nod1 and Nod2, which recognizes bacterial peptidoglycans released upon infection. RIP2 may also be involved in regulating wound healing and keratinocyte proliferation. RIP kinases serve as essential sensors of cellular stress. The RIP2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270928 [Multi-domain]  Cd Length: 284  Bit Score: 68.79  E-value: 1.65e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMVKME---PDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGA 96
Cdd:cd14026   2 LRYLSRGAFGTVSRARHADWRVTVAIKCLKLDspvGDSERNCLLKEAEILHKARFSYILPILGICNEPEFLGIVTEYMTN 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSL------QDIYQVTGSLSELQISYvcrEVLQGLAYLHSQKK--IHRDIKGANILINDAGEVRLADFGISA--QIGATL 166
Cdd:cd14026  82 GSLnellheKDIYPDVAWPLRLRILY---EIALGVNYLHNMSPplLHHDLKTQNILLDGEFHVKIADFGLSKwrQLSISQ 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 AR---RLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDV-HPLRVLFLMTKsGYQPPRLKEKGK 242
Cdd:cd14026 159 SRsskSAPEGGTIIYMPPEEYEPSQKRRASVKHDIYSYAIIMWEVLSRKIPFEEVtNPLQIMYSVSQ-GHRPDTGEDSLP 237
                       250       260       270
                ....*....|....*....|....*....|.
gi 6005810  243 WS----AAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd14026 238 VDiphrATLINLIESGWAQNPDERPSFLKCL 268
PTKc_DDR cd05051
Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors; PTKs catalyze ...
13-213 1.67e-12

Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270644 [Multi-domain]  Cd Length: 297  Bit Score: 68.90  E-value: 1.67e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEV--FKA---RDKVSGD-----------LVALKMVKMEPDDDV-STLQKEILILKTCRHANIV 75
Cdd:cd05051   3 PREKLEFVEKLGEGQFGEVhlCEAnglSDLTSDDfigndnkdepvLVAVKMLRPDASKNArEDFLKEVKIMSQLKDPNIV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   76 AYHGSYLWLQKLWICMEFCGAGSL-------QDIYQVTGSLSELQIS-----YVCREVLQGLAYLHSQKKIHRDIKGANI 143
Cdd:cd05051  83 RLLGVCTRDEPLCMIVEYMENGDLnqflqkhEAETQGASATNSKTLSygtllYMATQIASGMKYLESLNFVHRDLATRNC 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  144 LINDAGEVRLADFGIS----------AQIGATLARRlsfigtpyWMAPEvaaVALKGGYNELCDIWSLGITAIE---LAE 210
Cdd:cd05051 163 LVGPNYTIKIADFGMSrnlysgdyyrIEGRAVLPIR--------WMAWE---SILLGKFTTKSDVWAFGVTLWEiltLCK 231

                ...
gi 6005810  211 LQP 213
Cdd:cd05051 232 EQP 234
PTKc_EphR cd05033
Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
19-207 1.87e-12

Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EphB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis.The EphR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270629 [Multi-domain]  Cd Length: 266  Bit Score: 68.55  E-value: 1.87e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKARDKVSGD---LVALKMVKmepdDDVSTLQK-----EILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd05033   8 IEKVIGGGEFGEVCSGSLKLPGKkeiDVAIKTLK----SGYSDKQRldfltEASIMGQFDHPNVIRLEGVVTKSRPVMIV 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIYQVT-GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARR 169
Cdd:cd05033  84 TEYMENGSLDKFLRENdGKFTVTQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSDLVCKVSDFGLSRRLEDSEATY 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  170 LSFIG-TPY-WMAPEvaAVALKgGYNELCDIWSLGITAIE 207
Cdd:cd05033 164 TTKGGkIPIrWTAPE--AIAYR-KFTSASDVWSFGIVMWE 200
PTK_CCK4 cd05046
Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also ...
13-270 2.00e-12

Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor PTK (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. The CCK4 subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133178 [Multi-domain]  Cd Length: 275  Bit Score: 68.26  E-value: 2.00e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDK---VSGD--LVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAYHGSYLWLQK 86
Cdd:cd05046   3 PRSNLQEITTLGRGEFGEVFLAKAKgieEEGGetLVLVKALQKTKDENLqSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   87 LWICMEFCGAGSLQDIYQVTGS---------LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG 157
Cdd:cd05046  83 HYMILEYTDLGDLKQFLRATKSkdeklkpppLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 ISAQIGATLARRLSFIGTPY-WMAPEvaAVaLKGGYNELCDIWSLGITAIEL---AELqpPLFDVHPLRVLflmTKSGYQ 233
Cdd:cd05046 163 LSKDVYNSEYYKLRNALIPLrWLAPE--AV-QEDDFSTKSDVWSFGVLMWEVftqGEL--PFYGLSDEEVL---NRLQAG 234
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 6005810  234 PPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd05046 235 KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
23-271 2.20e-12

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 69.39  E-value: 2.20e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQ--KEILILKTCRHANIVAY-------HGSYLwlQKLWICMEF 93
Cdd:cd07853   8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRvfRELKMLCFFKHDNVLSAldilqppHIDPF--EEIYVVTEL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 cgagsLQ-DIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARR 169
Cdd:cd07853  86 -----MQsDLHKIIVSpqpLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFG--------LARV 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  170 LSF---------IGTPYWMAPEVaavaLKGG--YNELCDIWSLGITAIELAElQPPLFDVH-PLRVLFLMT--------- 228
Cdd:cd07853 153 EEPdeskhmtqeVVTQYYRAPEI----LMGSrhYTSAVDIWSVGCIFAELLG-RRILFQAQsPIQQLDLITdllgtpsle 227
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6005810  229 --------------KSGYQPPRLKEKGKWSA-----AFHnFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd07853 228 amrsacegarahilRGPHKPPSLPVLYTLSSqatheAVH-LLCRMLVFDPDKRISAADALAH 288
STKc_CDK8 cd07868
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs ...
22-213 2.68e-12

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270851 [Multi-domain]  Cd Length: 333  Bit Score: 68.93  E-value: 2.68e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   22 RLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYL-------WL------QKLW 88
Cdd:cd07868  24 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLshadrkvWLlfdyaeHDLW 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   89 ICMEFCGAGSLQdiyQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQIGA 164
Cdd:cd07868 104 HIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVmgegPERGRVKIADMGFARLFNS 180
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  165 ---TLARRLSFIGTPYWMAPEVAAVALKggYNELCDIWSLGITAIELAELQP 213
Cdd:cd07868 181 plkPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSEP 230
PTKc_Ack_like cd05040
Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs ...
21-208 4.18e-12

Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. The Ack-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270636 [Multi-domain]  Cd Length: 258  Bit Score: 67.37  E-value: 4.18e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKAR-DKVSGDL--VALKMVK---MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLwLQKLWICMEFC 94
Cdd:cd05040   1 EKLGDGSFGVVRRGEwTTPSGKViqVAVKCLKsdvLSQPNAMDDFLKEVNAMHSLDHPNLIRLYGVVL-SSPLMMVTELA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIYQVTGSlsELQISYVCREVLQ---GLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIG-------A 164
Cdd:cd05040  80 PLGSLLDRLRKDQG--HFLISTLCDYAVQianGMAYLESKRFIHRDLAARNILLASKDKVKIGDFGLMRALPqnedhyvM 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  165 TLARRLSFIgtpyWMAPEvaavALK-GGYNELCDIWSLGITAIEL 208
Cdd:cd05040 158 QEHRKVPFA----WCAPE----SLKtRKFSHASDVWMFGVTLWEM 194
STKc_IRAK1 cd14159
Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 1; ...
23-278 6.49e-12

Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain, and a C-terminal domain; IRAK-4 lacks the C-terminal domain. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK1 plays a role in the activation of IRF3/7, STAT, and NFkB. It mediates IL-6 and IFN-gamma responses following IL-1 and IL-18 stimulation, respectively. It also plays an essential role in IFN-alpha induction downstream of TLR7 and TLR9. The IRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271061 [Multi-domain]  Cd Length: 296  Bit Score: 67.16  E-value: 6.49e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARdkVSGDLVALKMVKMEPDDDVSTLQK----EILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd14159   1 IGEGGFGCVYQAV--MRNTEYAVKRLKEDSELDWSVVKNsfltEVEKLSRFRHPNIVDLAGYSAQQGNYCLIYVYLPNGS 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQVTGS---LSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDAGEVRLADFGI--------SAQIGAT 165
Cdd:cd14159  79 LEDRLHCQVScpcLSWSQRLHVLLGTARAIQYLHSDSPslIHGDVKSSNILLDAALNPKLGDFGLarfsrrpkQPGMSST 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  166 LARRLSFIGTPYWMAPEVAAValkGGYNELCDIWSLGITAIELAELQPPLfDVHPlrvlflMTKSGYQPPRLKEKgkwSA 245
Cdd:cd14159 159 LARTQTVRGTLAYLPEEYVKT---GTLSVEIDVYSFGVVLLELLTGRRAM-EVDS------CSPTKYLKDLVKEE---EE 225
                       250       260       270
                ....*....|....*....|....*....|...
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPG 278
Cdd:cd14159 226 AQHTPTTMTHSAEAQAAQLATSICQKHLDPQAG 258
STKc_TTBK cd14017
Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the ...
17-214 9.89e-12

Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TTBK is a neuron-specific kinase that phosphorylates the microtubule-associated protein tau and promotes its aggregation. Higher vertebrates contain two TTBK proteins, TTBK1 and TTBK2, both of which have been implicated in neurodegeneration. TTBK1 has been linked to Alzheimer's disease (AD) while TTBK2 is associated with spinocerebellar ataxia type 11 (SCA11). Both AD and SCA11 patients show the presence of neurofibrillary tangles in the brain. The Drosophila TTBK homolog, Asator, is an essential protein that localizes to the mitotic spindle during mitosis and may be involved in regulating microtubule dynamics and function. The TTBK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270919 [Multi-domain]  Cd Length: 263  Bit Score: 66.13  E-value: 9.89e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVstLQKEILILKT---CRH-ANIVAY--HGSYlwlqkLWIC 90
Cdd:cd14017   2 WKVVKKIGGGGFGEIYKVRDVVDGEEVAMKVESKSQPKQV--LKMEVAVLKKlqgKPHfCRLIGCgrTERY-----NYIV 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGagslQDIYQVTGSLSELQISYVC-----REVLQGLAYLHSQKKIHRDIKGANILI----NDAGEVRLADFGISAQ 161
Cdd:cd14017  75 MTLLG----PNLAELRRSQPRGKFSVSTtlrlgIQILKAIEDIHEVGFLHRDVKPSNFAIgrgpSDERTVYILDFGLARQ 150
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  162 IGAT-----LARRLS--FIGTPYWMApeVAAVALKggynELC---DIWSLGITAIELAELQPP 214
Cdd:cd14017 151 YTNKdgeveRPPRNAagFRGTVRYAS--VNAHRNK----EQGrrdDLWSWFYMLIEFVTGQLP 207
STKc_TGFbR1_ACVR1b_ACVR1c cd14143
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I ...
21-220 1.02e-11

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR1, also called Activin receptor-Like Kinase 5 (ALK5), functions as a receptor for TGFbeta and phoshorylates SMAD2/3. TGFbeta proteins are cytokines that regulate cell growth, differentiation, and survival, and are critical in the development and progression of many human cancers. Mutations in TGFbR1 (and TGFbR2) can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. ACVR1b (also called ALK4) and ACVR1c (also called ALK7) act as receptors for activin A and B, respectively. TGFbR1, ACVR1b, and ACVR1c belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like TGFbR1, ACVR1b, and ACVR1c, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The TGFbR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271045 [Multi-domain]  Cd Length: 288  Bit Score: 66.70  E-value: 1.02e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFkaRDKVSGDLVAlkmVKMEPDDDVSTLQKEILILKTC--RHANIVAY-----HGSYLWLQkLWICMEF 93
Cdd:cd14143   1 ESIGKGRFGEVW--RGRWRGEDVA---VKIFSSREERSWFREAEIYQTVmlRHENILGFiaadnKDNGTWTQ-LWLVSDY 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDiYQVTGSLSELQISYVCREVLQGLAYLH-----SQKK---IHRDIKGANILINDAGEVRLADFGISAQIGAT 165
Cdd:cd14143  75 HEHGSLFD-YLNRYTVTVEGMIKLALSIASGLAHLHmeivgTQGKpaiAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 153
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6005810  166 LA-------RRlsfIGTPYWMAPEVAAVALKGGYNE---LCDIWSLGITAIELA----------ELQPPLFDVHP 220
Cdd:cd14143 154 TDtidiapnHR---VGTKRYMAPEVLDDTINMKHFEsfkRADIYALGLVFWEIArrcsiggiheDYQLPYYDLVP 225
STKc_Unc-89_rpt2 cd14112
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated ...
13-272 1.04e-11

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271014 [Multi-domain]  Cd Length: 259  Bit Score: 66.02  E-value: 1.04e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVS--GDLVALKMvkMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd14112   1 PTGRFSFGSEIFRGRFSVIVKAVDSTTetDAHCAVKI--FEVSDEASEAVREFESLRTLQHENVQRLIAAFKPSNFAYLV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEfcgagSLQ-DIYQVTGS---LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILIND--AGEVRLADFGiSAQIGA 164
Cdd:cd14112  79 ME-----KLQeDVFTRFSSndyYSEEQVATTVRQILDALHYLHFKGIAHLDVQPDNIMFQSvrSWQVKLVDFG-RAQKVS 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  165 TLARRLSfIGTPYWMAPEV----AAVALKGgynelcDIWSLGITAIELaelqppLFDVHPLR------------VLFLMT 228
Cdd:cd14112 153 KLGKVPV-DGDTDWASPEFhnpeTPITVQS------DIWGLGVLTFCL------LSGFHPFTseyddeeetkenVIFVKC 219
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 6005810  229 KSGYQPPRLKEKGKwsaafhNFIKVTLTKSPKKRPSATKMLSHQ 272
Cdd:cd14112 220 RPNLIFVEATQEAL------RFATWALKKSPTRRMRTDEALEHR 257
PTKc_Ror1 cd05090
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
13-213 1.05e-11

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270672 [Multi-domain]  Cd Length: 283  Bit Score: 66.57  E-value: 1.05e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKVSG----DLVALKMVK-MEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKL 87
Cdd:cd05090   3 PLSAVRFMEELGECAFGKIYKGHLYLPGmdhaQLVAIKTLKdYNNPQQWNEFQQEASLMTELHHPNIVCLLGVVTQEQPV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIY-----------------QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE 150
Cdd:cd05090  83 CMLFEFMNQGDLHEFLimrsphsdvgcssdedgTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILVGEQLH 162
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  151 VRLADFGISAQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAE--LQP 213
Cdd:cd05090 163 VKISDLGLSREIYSSDYYRVQnkSLLPIRWMPPE---AIMYGKFSSDSDIWSFGVVLWEIFSfgLQP 226
STKc_BMPR1a cd14220
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; ...
21-220 1.11e-11

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1a, also called Activin receptor-Like Kinase 3 (ALK3), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Germline mutations in BMPR1a are associated with an increased risk to Juvenile Polyposis Syndrome, a hamartomatous disorder that may lead to gastrointestinal cancer. BMPR1a may also play an indirect role in the development of hematopoietic stem cells (HSCs) as osteoblasts are a major component of the HSC niche within the bone marrow. BMPR1a belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1a, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271122 [Multi-domain]  Cd Length: 287  Bit Score: 66.60  E-value: 1.11e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   21 QRLGGGTYGEVFKARDKvsGDLVALKMVKMEPDddvSTLQKEILILKTC--RHANIVAY-----HGSYLWLQkLWICMEF 93
Cdd:cd14220   1 RQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE---ASWFRETEIYQTVlmRHENILGFiaadiKGTGSWTQ-LYLITDY 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQDIYQV----TGSLSELQISYVCrevlqGLAYLHS-----QKK---IHRDIKGANILINDAGEVRLADFGISA- 160
Cdd:cd14220  75 HENGSLYDFLKCttldTRALLKLAYSAAC-----GLCHLHTeiygtQGKpaiAHRDLKSKNILIKKNGTCCIADLGLAVk 149
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  161 ------QIGATLARRlsfIGTPYWMAPEVAAVALKGGYNE---LCDIWSLGITAIELA----------ELQPPLFDVHP 220
Cdd:cd14220 150 fnsdtnEVDVPLNTR---VGTKRYMAPEVLDESLNKNHFQayiMADIYSFGLIIWEMArrcvtggiveEYQLPYYDMVP 225
PTKc_Tie2 cd05088
Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the ...
23-269 1.13e-11

Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor PTK (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. The Tie2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133219 [Multi-domain]  Cd Length: 303  Bit Score: 66.56  E-value: 1.13e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSG---DLVALKMVKMEPDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05088  15 IGEGNFGQVLKARIKKDGlrmDAAIKRMKEYASKDDHRDFAGELEVLcKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDI----------------YQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI 162
Cdd:cd05088  95 LLDFlrksrvletdpafaiaNSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGTpYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYqppRLKEKGK 242
Cdd:cd05088 175 EVYVKKTMGRLPV-RWMAIESLNYSV---YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEKPLN 247
                       250       260
                ....*....|....*....|....*..
gi 6005810  243 WSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05088 248 CDDEVYDLMRQCWREKPYERPSFAQIL 274
STKc_LRRK1 cd14067
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 1; STKs catalyze ...
32-234 1.26e-11

Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK1 is one of two vertebrate LRRKs which show complementary expression in the brain. It can form heterodimers with LRRK2, and may influence the age of onset of LRRK2-associated Parkinson's disease. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270969 [Multi-domain]  Cd Length: 276  Bit Score: 66.14  E-value: 1.26e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   32 FKARDKVSGDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGsyLWLQKLWICMEFCGAGSLQDI--------- 102
Cdd:cd14067  30 CKKRTDGSADTMLKHLRAADAMKNFSEFRQEASMLHSLQHPCIVYLIG--ISIHPLCFALELAPLGSLNTVleenhkgss 107
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  103 YQVTGSLSELQISYvcrEVLQGLAYLHSQKKIHRDIKGANILI-----NDAGEVRLADFGISAQI---GAtlarrLSFIG 174
Cdd:cd14067 108 FMPLGHMLTFKIAY---QIAAGLAYLHKKNIIFCDLKSDNILVwsldvQEHINIKLSDYGISRQSfheGA-----LGVEG 179
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  175 TPYWMAPEVAAVALkggYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKsGYQP 234
Cdd:cd14067 180 TPGYQAPEIRPRIV---YDEKVDMFSYGMVLYELLSGQRPSLGHHQLQIAKKLSK-GIRP 235
STKc_beta_ARK cd05606
Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs ...
23-202 1.71e-11

Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The beta-ARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270757 [Multi-domain]  Cd Length: 279  Bit Score: 65.54  E-value: 1.71e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLVALKM-----VKMEPDDDVStLQKEILILKTCRHAN---IVAYHGSYLWLQKLWICMEFC 94
Cdd:cd05606   2 IGRGGFGEVYGCRKADTGKMYAMKCldkkrIKMKQGETLA-LNERIMLSLVSTGGDcpfIVCMTYAFQTPDKLCFILDLM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQdiYQVT--GSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARrlSF 172
Cdd:cd05606  81 NGGDLH--YHLSqhGVFSEAEMRFYAAEVILGLEHMHNRFIVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--AS 156
                       170       180       190
                ....*....|....*....|....*....|.
gi 6005810  173 IGTPYWMAPEVAAvalKG-GYNELCDIWSLG 202
Cdd:cd05606 157 VGTHGYMAPEVLQ---KGvAYDSSADWFSLG 184
PTKc_EphR_B cd05065
Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze ...
23-208 2.16e-11

Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EphB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphB receptors play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of colon cancer progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. The EphB subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173638 [Multi-domain]  Cd Length: 269  Bit Score: 65.28  E-value: 2.16e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSG---DLVALKMVKM-EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05065  12 IGAGEFGEVCRGRLKLPGkreIFVAIKTLKSgYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGA 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISA--QIGATLARRLSFIGT 175
Cdd:cd05065  92 LDSfLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRflEDDTSDPTYTSSLGG 171
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 6005810  176 PY---WMAPEvaAVALKgGYNELCDIWSLGITAIEL 208
Cdd:cd05065 172 KIpirWTAPE--AIAYR-KFTSASDVWSYGIVMWEV 204
PTK_Ryk cd05043
Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase ...
17-234 2.34e-11

Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. The Ryk subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270639 [Multi-domain]  Cd Length: 279  Bit Score: 65.17  E-value: 2.34e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRlggGTYGEVFKA--RDKVSGDLVAL-KMVKmepdDDVSTLQKEILILKTCR-----HANIVA-YHGSYLWLQKL 87
Cdd:cd05043  11 SDLLQE---GTFGRIFHGilRDEKGKEEEVLvKTVK----DHASEIQVTMLLQESSLlyglsHQNLLPiLHVCIEDGEKP 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WICMEFCGAGSLQDIYQ--------VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS 159
Cdd:cd05043  84 MVLYPYMNWGNLKLFLQqcrlseanNPQALSTQQLVHMALQIACGMSYLHRRGVIHKDIAARNCVIDDELQVKITDNALS 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQI--------GATLARRLSfigtpyWMAPEVAAvalKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRvLFLMTKS 230
Cdd:cd05043 164 RDLfpmdyhclGDNENRPIK------WMSLESLV---NKEYSSASDVWSFGVLLWELMTLgQTPYVEIDPFE-MAAYLKD 233

                ....*..
gi 6005810  231 GY---QP 234
Cdd:cd05043 234 GYrlaQP 240
PTKc_Tie1 cd05089
Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; ...
23-211 3.70e-11

Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development.


Pssm-ID: 270671 [Multi-domain]  Cd Length: 297  Bit Score: 65.02  E-value: 3.70e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGDLV--ALKMVK-MEPDDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05089  10 IGEGNFGQVIKAMIKKDGLKMnaAIKMLKeFASENDHRDFAGELEVLcKLGHHPNIINLLGACENRGYLYIAIEYAPYGN 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQ----------------VTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS--- 159
Cdd:cd05089  90 LLDFLRksrvletdpafakehgTASTLTSQQLLQFASDVAKGMQYLSEKQFIHRDLAARNVLVGENLVSKIADFGLSrge 169
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 6005810  160 -AQIGATLARrlsfigTPY-WMAPEVAAVALkggYNELCDIWSLGITAIELAEL 211
Cdd:cd05089 170 eVYVKKTMGR------LPVrWMAIESLNYSV---YTTKSDVWSFGVLLWEIVSL 214
STKc_HIPK cd14211
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs ...
17-208 6.85e-11

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). They show speckled localization in the nucleus, apart from the nucleoles. They play roles in the regulation of many nuclear pathways including gene transcription, cell survival, proliferation, differentiation, development, and DNA damage response. Vertebrates contain three HIPKs (HIPK1-3) and mammals harbor an additional family member HIPK4, which does not contain a homeobox-interacting domain and is localized in the cytoplasm. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors and it regulates gene transcription during development and in DNA damage response. The HIPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271113 [Multi-domain]  Cd Length: 329  Bit Score: 64.39  E-value: 6.85e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPdDDVSTLQKEILILKTCRHANIVAYH--GSYLWLQ-KLWICMEF 93
Cdd:cd14211   1 YEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHP-SYARQGQIEVSILSRLSQENADEFNfvRAYECFQhKNHTCLVF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 cgagSL--QDIY--QVTGSLSELQISY---VCREVLQGLAYLHSQKKIHRDIKGANILINDAG----EVRLADFGISAQI 162
Cdd:cd14211  80 ----EMleQNLYdfLKQNKFSPLPLKYirpILQQVLTALLKLKSLGLIHADLKPENIMLVDPVrqpyRVKVIDFGSASHV 155
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  163 GATLARrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd14211 156 SKAVCS--TYLQSRYYRAPE---IILGLPFCEAIDMWSLGCVIAEL 196
PTKc_TrkA cd05092
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze ...
23-208 7.35e-11

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. The TrkA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270674 [Multi-domain]  Cd Length: 280  Bit Score: 63.83  E-value: 7.35e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA--------RDKVsgdLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd05092  13 LGEGAFGKVFLAechnllpeQDKM---LVAVKALKEATESARQDFQREAELLTVLQHQHIVRFYGVCTEGEPLIMVFEYM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQDIY---------------QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS 159
Cdd:cd05092  90 RHGDLNRFLrshgpdakildggegQAPGQLTLGQMLQIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMS 169
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  160 AQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05092 170 RDIYSTDYYRVGgrTMLPIRWMPPE---SILYRKFTTESDIWSFGVVLWEI 217
STKc_ACVR2b cd14140
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the ...
26-208 9.30e-11

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2b (or ActRIIB) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271042 [Multi-domain]  Cd Length: 291  Bit Score: 63.51  E-value: 9.30e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKARdkVSGDLVAlkmVKMEPDDDVSTLQKEILILKT--CRHANIVAY-----HGSYLWLQkLWICMEFCGAGS 98
Cdd:cd14140   6 GRFGCVWKAQ--LMNEYVA---VKIFPIQDKQSWQSEREIFSTpgMKHENLLQFiaaekRGSNLEME-LWLITAFHDKGS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDiYQVTGSLSELQISYVCREVLQGLAYLHSQ-----------KKIHRDIKGANILINDAGEVRLADFGISAQI--GAT 165
Cdd:cd14140  80 LTD-YLKGNIVSWNELCHIAETMARGLSYLHEDvprckgeghkpAIAHRDFKSKNVLLKNDLTAVLADFGLAVRFepGKP 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  166 LARRLSFIGTPYWMAPEVAAVALKGGYNEL--CDIWSLGITAIEL 208
Cdd:cd14140 159 PGDTHGQVGTRRYMAPEVLEGAINFQRDSFlrIDMYAMGLVLWEL 203
PHA03210 PHA03210
serine/threonine kinase US3; Provisional
57-208 1.08e-10

serine/threonine kinase US3; Provisional


Pssm-ID: 165476 [Multi-domain]  Cd Length: 501  Bit Score: 65.10  E-value: 1.08e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    57 STLQKEILILKTCRHANIVAYH-------GSYLWLQK----LWICMeFCGAGSLQDiyqvtgSLSELQISYVCREVLQGL 125
Cdd:PHA03210 208 IQLENEILALGRLNHENILKIEeilrseaNTYMITQKydfdLYSFM-YDEAFDWKD------RPLLKQTRAIMKQLLCAV 280
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   126 AYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-GATLARRLSFIGTPYWMAPEVAAvalKGGYNELCDIWSLGIT 204
Cdd:PHA03210 281 EYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFeKEREAFDYGWVGTVATNSPEILA---GDGYCEITDIWSCGLI 357

                 ....
gi 6005810   205 AIEL 208
Cdd:PHA03210 358 LLDM 361
PTKc_TrkC cd05094
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze ...
19-229 1.53e-10

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. The TrkC subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270676 [Multi-domain]  Cd Length: 287  Bit Score: 63.11  E-value: 1.53e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKA--------RDKVsgdLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWIC 90
Cdd:cd05094   9 LKRELGEGAFGKVFLAecynlsptKDKM---LVAVKTLKDPTLAARKDFQREAELLTNLQHDHIVKFYGVCGDGDPLIMV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   91 MEFCGAGSLQDIY----------------QVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLA 154
Cdd:cd05094  86 FEYMKHGDLNKFLrahgpdamilvdgqprQAKGELGLSQMLHIATQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 165
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  155 DFGISAQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMTK 229
Cdd:cd05094 166 DFGMSRDVYSTDYYRVGghTMLPIRWMPPE---SIMYRKFTTESDVWSFGVILWEIFTYgKQPWFQLSNTEVIECITQ 240
PK_GC_unk cd14045
Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The ...
40-235 1.53e-10

Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270947 [Multi-domain]  Cd Length: 269  Bit Score: 62.57  E-value: 1.53e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   40 GDLVALKMVKMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYqvtgsLSE-------L 112
Cdd:cd14045  30 GRTVAIKKIAKKSFTLSKRIRKEVKQVRELDHPNLCKFIGGCIEVPNVAIITEYCPKGSLNDVL-----LNEdiplnwgF 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  113 QISYvCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGI-------SAQIGATLARRLSFIgtpyWMAPEVAA 185
Cdd:cd14045 105 RFSF-ATDIARGMAYLHQHKIYHGRLKSSNCVIDDRWVCKIADYGLttyrkedGSENASGYQQRLMQV----YLPPENHS 179
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  186 VaLKGGYNELCDIWSLGITAIELAELQPPL-FDVHPLrvlflmtKSGYQPP 235
Cdd:cd14045 180 N-TDTEPTQATDVYSYAIILLEIATRNDPVpEDDYSL-------DEAWCPP 222
STKc_RIP1 cd14027
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze ...
23-203 1.95e-10

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP1 harbors a C-terminal Death domain (DD), which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 can also recruit other kinases including MEKK1, MEKK3, and RIP3 through an intermediate domain (ID) that bears a RIP homotypic interaction motif (RHIM). RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accummulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. RIP kinases serve as essential sensors of cellular stress. The RIP1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270929 [Multi-domain]  Cd Length: 267  Bit Score: 62.52  E-value: 1.95e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGdLVALKMVKMEPD--DDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQ 100
Cdd:cd14027   1 LDSGGFGKVSLCFHRTQG-LVVLKTVYTGPNciEHNEALLEEGKMMNRLRHSRVVKLLGVILEEGKYSLVMEYMEKGNLM 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  101 DIYQVTgslsELQISYVCR---EVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS-----AQIGATLARRLSF 172
Cdd:cd14027  80 HVLKKV----SVPLSVKGRiilEIIEGMAYLHGKGVIHKDLKPENILVDNDFHIKIADLGLAsfkmwSKLTKEEHNEQRE 155
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 6005810  173 I--------GTPYWMAPE-VAAVALKGgyNELCDIWSLGI 203
Cdd:cd14027 156 VdgtakknaGTLYYMAPEhLNDVNAKP--TEKSDVYSFAI 193
PTKc_Tec_Rlk cd05114
Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular ...
19-208 2.10e-10

Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec-like subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. The Tec/Rlk subfamily is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270685 [Multi-domain]  Cd Length: 260  Bit Score: 62.19  E-value: 2.10e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEV----FKARDKVSgdLVALKMVKMEPDDDVstlqKEILILKTCRHANIVAYHGSYLWLQKLWICMEFC 94
Cdd:cd05114   8 FMKELGSGLFGVVrlgkWRAQYKVA--IKAIREGAMSEEDFI----EEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFM 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 GAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATlaRRLSFI 173
Cdd:cd05114  82 ENGCLLNyLRQRRGKLSRDMLLSMCQDVCEGMEYLERNNFIHRDLAARNCLVNDTGVVKVSDFGMTRYVLDD--QYTSSS 159
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 6005810  174 GTPY---WMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd05114 160 GAKFpvkWSPPE---VFNYSKFSSKSDVWSFGVLMWEV 194
PTKc_HER2 cd05109
Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the ...
20-235 2.16e-10

Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 (ErbB2, HER2/neu) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner of other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. The HER2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270684 [Multi-domain]  Cd Length: 279  Bit Score: 62.35  E-value: 2.16e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKM-VKMEPDDDVSTLQKEILilktcRHANIVAYHGSYLWLQKLWICM------- 91
Cdd:cd05109  12 VKVLGSGAFGTVYKGIWIPDGENVKIPVaIKVLRENTSPKANKEIL-----DEAYVMAGVGSPYVCRLLGICLtstvqlv 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 -EFCGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGisaqigatLARR 169
Cdd:cd05109  87 tQLMPYGCLLDyVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFG--------LARL 158
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6005810  170 LSFIGTPY----------WMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGY---QPP 235
Cdd:cd05109 159 LDIDETEYhadggkvpikWMALE---SILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGErlpQPP 234
PTKc_Ror2 cd05091
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
19-213 2.16e-10

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270673 [Multi-domain]  Cd Length: 284  Bit Score: 62.34  E-value: 2.16e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   19 LLQRLGGGTYGEVFKAR--DKVSGD---LVALKMVKmepDDDVSTLQKEI----LILKTCRHANIVAYHGSYLWLQKLWI 89
Cdd:cd05091  10 FMEELGEDRFGKVYKGHlfGTAPGEqtqAVAIKTLK---DKAEGPLREEFrheaMLRSRLQHPNIVCLLGVVTKEQPMSM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   90 CMEFCG----------------AGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRL 153
Cdd:cd05091  87 IFSYCShgdlheflvmrsphsdVGSTDDDKTVKSTLEPADFLHIVTQIAAGMEYLSSHHVVHKDLATRNVLVFDKLNVKI 166
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6005810  154 ADFGISAQIGAtlARRLSFIGTPY----WMAPEvaaVALKGGYNELCDIWSLGITAIELAE--LQP 213
Cdd:cd05091 167 SDLGLFREVYA--ADYYKLMGNSLlpirWMSPE---AIMYGKFSIDSDIWSYGVVLWEVFSygLQP 227
PHA03211 PHA03211
serine/threonine kinase US3; Provisional
101-218 2.18e-10

serine/threonine kinase US3; Provisional


Pssm-ID: 223009 [Multi-domain]  Cd Length: 461  Bit Score: 63.76  E-value: 2.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   101 DIYQVTGS----LSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGIS--AQIGATLARRLSFIG 174
Cdd:PHA03211 245 DLYTYLGArlrpLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAAcfARGSWSTPFHYGIAG 324
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 6005810   175 TPYWMAPEVAAvalKGGYNELCDIWSLGITAIELAELQPPLFDV 218
Cdd:PHA03211 325 TVDTNAPEVLA---GDPYTPSVDIWSAGLVIFEAAVHTASLFSA 365
PTKc_c-ros cd05044
Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the ...
23-273 2.29e-10

Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily contains c-ros, Sevenless, and similar proteins. The proto-oncogene c-ros encodes an orphan receptor PTK (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. The c-ros subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270640 [Multi-domain]  Cd Length: 268  Bit Score: 62.05  E-value: 2.29e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFK--ARDKV---SGDL-VALKMV-KMEPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCG 95
Cdd:cd05044   3 LGSGAFGEVFEgtAKDILgdgSGETkVAVKTLrKGATDQEKAEFLKEAHLMSNFKHPNILKLLGVCLDNDPQYIILELME 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   96 AGSL---------QDIYQVTGSLSELqISyVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE----VRLADFGISAQI 162
Cdd:cd05044  83 GGDLlsylraarpTAFTPPLLTLKDL-LS-ICVDVAKGCVYLEDMHFVHRDLAARNCLVSSKDYrervVKIGDFGLARDI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  163 GATLARRLSFIGT-PY-WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMTKSGY--QPPRL 237
Cdd:cd05044 161 YKNDYYRKEGEGLlPVrWMAPE---SLVDGVFTTQSDVWAFGVLMWEILTLgQQPYPARNNLEVLHFVRAGGRldQPDNC 237
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 6005810  238 KEKgkwsaaFHNFIKVTLTKSPKKRPSATKMLsHQL 273
Cdd:cd05044 238 PDD------LYELMLRCWSTDPEERPSFARIL-EQL 266
PKc_DYRK2_3 cd14224
Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and ...
13-247 2.82e-10

Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of DYRK2 and DYRK3, and similar proteins. Drosophila DYRK2 interacts and phosphorylates the chromatin remodelling factor, SNR1 (Snf5-related 1), and also interacts with the essential chromatin component, trithorax. It may play a role in chromatin remodelling. Vertebrate DYRK2 phosphorylates and regulates the tumor suppressor p53 to induce apoptosis in response to DNA damage. It can also phosphorylate the transcription factor, nuclear factor of activated T cells (NFAT). DYRK2 is overexpressed in lung adenocarcinoma and esophageal carcinomas, and is a predictor for favorable prognosis in lung adenocarcinoma. DYRK3, also called regulatory erythroid kinase (REDK), is highly expressed in erythroid cells and the testis, and is also present in adult kidney and liver. It promotes cell survival by phosphorylating and activating SIRT1, an NAD(+)-dependent protein deacetylase, which promotes p53 deacetylation, resulting in the inhibition of apoptosis. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other S/T kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271126 [Multi-domain]  Cd Length: 380  Bit Score: 63.23  E-value: 2.82e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDH----YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTlQKEILILKTCRHA------NIVAYHGSYL 82
Cdd:cd14224  59 PHDHiayrYEVLKVIGKGSFGQVVKAYDHKTHQHVALKMVRNEKRFHRQA-AEEIRILEHLKKQdkdntmNVIHMLESFT 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   83 WLQKlwICMEFcgagSLQDIyqvtgSLSEL------------QISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE 150
Cdd:cd14224 138 FRNH--ICMTF----ELLSM-----NLYELikknkfqgfslqLVRKFAHSILQCLDALHRNKIIHCDLKPENILLKQQGR 206
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  151 --VRLADFGISAqigATLARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITaieLAELQP--PLF--DVHPLRVL 224
Cdd:cd14224 207 sgIKVIDFGSSC---YEHQRIYTYIQSRFYRAPE---VILGARYGMPIDMWSFGCI---LAELLTgyPLFpgEDEGDQLA 277
                       250       260
                ....*....|....*....|...
gi 6005810  225 FLMTKSGYQPPRLKEKGKWSAAF 247
Cdd:cd14224 278 CMIELLGMPPQKLLETSKRAKNF 300
PTKc_VEGFR cd05054
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
13-211 3.05e-10

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. VEGFR subfamily members are receptor PTKss (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. The VEGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270647 [Multi-domain]  Cd Length: 298  Bit Score: 62.12  E-value: 3.05e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKAR----DKV-SGDLVALKMVKMEP-DDDVSTLQKEILIL-KTCRHANIVAYHGSYLWLQ 85
Cdd:cd05054   5 PRDRLKLGKPLGRGAFGKVIQASafgiDKSaTCRTVAVKMLKEGAtASEHKALMTELKILiHIGHHLNVVNLLGACTKPG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 K-LWICMEFCGAGSLQ----------------------------DIYQVTGSLSELqISYvCREVLQGLAYLHSQKKIHR 136
Cdd:cd05054  85 GpLMVIVEFCKFGNLSnylrskreefvpyrdkgardveeeedddELYKEPLTLEDL-ICY-SFQVARGMEFLASRKCIHR 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  137 DIKGANILINDAGEVRLADFGISAQI----------GATLARRlsfigtpyWMAPEvaaVALKGGYNELCDIWSLGITAI 206
Cdd:cd05054 163 DLAARNILLSENNVVKICDFGLARDIykdpdyvrkgDARLPLK--------WMAPE---SIFDKVYTTQSDVWSFGVLLW 231

                ....*
gi 6005810  207 ELAEL 211
Cdd:cd05054 232 EIFSL 236
PKc_DYRK4 cd14225
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
15-273 4.09e-10

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. DYRK4 is a testis-specific kinase with restricted expression to postmeiotic spermatids. It may function during spermiogenesis, however, it is not required for male fertility. DYRK4 has also been detected in a human teratocarcinoma cell line induced to produce postmitotic neurons. It may have a role in neuronal differentiation. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. The DYRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271127 [Multi-domain]  Cd Length: 341  Bit Score: 62.41  E-value: 4.09e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DH----YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPDDDVSTLQkEILILKTCRHA------NIVaYHGSYLWL 84
Cdd:cd14225  39 DHiayrYEILEVIGKGSFGQVVKALDHKTNEHVAIKIIRNKKRFHHQALV-EVKILDALRRKdrdnshNVI-HMKEYFYF 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QK-LWICMEFCGAGSLQDI----YQvtgSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGE--VRLADFG 157
Cdd:cd14225 117 RNhLCITFELLGMNLYELIkknnFQ---GFSLSLIRRFAISLLQCLRLLYRERIIHCDLKPENILLRQRGQssIKVIDFG 193
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  158 ISAQigaTLARRLSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITaieLAELQP--PLF----DVHPLRVlfLMTKSG 231
Cdd:cd14225 194 SSCY---EHQRVYTYIQSRFYRSPE---VILGLPYSMAIDMWSLGCI---LAELYTgyPLFpgenEVEQLAC--IMEVLG 262
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 6005810  232 YQPPRLKEKGKWSAAFH----NFIKVTLTKSPKKRPSaTKMLSHQL 273
Cdd:cd14225 263 LPPPELIENAQRRRLFFdskgNPRCITNSKGKKRRPN-SKDLASAL 307
STKc_ACVR2a cd14141
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the ...
26-209 4.65e-10

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2a (or ActRIIA) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271043 [Multi-domain]  Cd Length: 290  Bit Score: 61.59  E-value: 4.65e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   26 GTYGEVFKArdKVSGDLVAlkmVKMEPDDDVSTLQKE--ILILKTCRHANIVAY-----HGSYLWLQkLWICMEFCGAGS 98
Cdd:cd14141   6 GRFGCVWKA--QLLNEYVA---VKIFPIQDKLSWQNEyeIYSLPGMKHENILQFigaekRGTNLDVD-LWLITAFHEKGS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDiYQVTGSLSELQISYVCREVLQGLAYLHSQ----------KKIHRDIKGANILINDAGEVRLADFGISAQI--GATL 166
Cdd:cd14141  80 LTD-YLKANVVSWNELCHIAQTMARGLAYLHEDipglkdghkpAIAHRDIKSKNVLLKNNLTACIADFGLALKFeaGKSA 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 6005810  167 ARRLSFIGTPYWMAPEVAAVALKGGYNEL--CDIWSLGITAIELA 209
Cdd:cd14141 159 GDTHGQVGTRRYMAPEVLEGAINFQRDAFlrIDMYAMGLVLWELA 203
pknD PRK13184
serine/threonine-protein kinase PknD;
16-214 4.81e-10

serine/threonine-protein kinase PknD;


Pssm-ID: 183880 [Multi-domain]  Cd Length: 932  Bit Score: 63.25  E-value: 4.81e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    16 HYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmEPDDDVSTLQKEIL----ILKTCRHANIVAYHGSYLWLQKLWICM 91
Cdd:PRK13184   3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIR-EDLSENPLLKKRFLreakIAADLIHPGIVPVYSICSDGDPVYYTM 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    92 EFCGAGSLQDIYQVT---GSLS-ELQISY-------VCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFG--- 157
Cdd:PRK13184  82 PYIEGYTLKSLLKSVwqkESLSkELAEKTsvgaflsIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGaai 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810   158 -----------ISAQIGATLARRLS----FIGTPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAELQPP 214
Cdd:PRK13184 162 fkkleeedlldIDVDERNICYSSMTipgkIVGTPDYMAPE----RLLGVpASESTDIYALGVILYQMLTLSFP 230
PTK_HER3 cd05111
Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR ...
20-242 4.94e-10

Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 contains an impaired tyr kinase domain, which lacks crucial residues for catalytic activity against exogenous substrates but is still able to bind ATP and autophosphorylate. HER3 binds the neuregulin ligands, NRG1 and NRG2, and it relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. The HER3 subfamily is part of a larger superfamily that includes other pseudokinases and the the catalytic domains of active kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173656 [Multi-domain]  Cd Length: 279  Bit Score: 61.51  E-value: 4.94e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKmVKMEPDDDVSTLQK------EILILKTCRHANIVAYHGSYLWLQkLWICMEF 93
Cdd:cd05111  12 LKVLGSGVFGTVHKGIWIPEGDSIKIP-VAIKVIQDRSGRQSfqavtdHMLAIGSLDHAYIVRLLGICPGAS-LQLVTQL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   94 CGAGSLQD-IYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGATLARRL-S 171
Cdd:cd05111  90 LPLGSLLDhVRQHRGSLGPQLLLNWCVQIAKGMYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGVADLLYPDDKKYFyS 169
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  172 FIGTPY-WMAPEvaaVALKGGYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVlflmtksgyqpPRLKEKGK 242
Cdd:cd05111 170 EAKTPIkWMALE---SIHFGKYTHQSDVWSYGVTVWEMMTFgAEPYAGMRLAEV-----------PDLLEKGE 228
STKc_HIPK3 cd14229
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; ...
17-208 5.14e-10

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK3 is a Fas-interacting protein that induces FADD (Fas-associated death domain) phosphorylation and mediates FasL-induced JNK activation. Overexpression of HIPK3 does not affect cell death, however its expression in prostate cancer cells contributes to increased resistance to Fas receptor-mediated apoptosis. HIPK3 also plays a role in regulating steroidogenic gene expression. In response to cAMP, HIPK3 activates the phosphorylation of JNK and c-Jun, leading to increased activity of the transcription factor SF-1 (Steroidogenic factor 1), a key regulator for steroid biosynthesis in the gonad and adrenal gland. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271131 [Multi-domain]  Cd Length: 330  Bit Score: 61.97  E-value: 5.14e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPdDDVSTLQKEILILKTCRHANIVAYHgsylwLQKLWICMEFCGA 96
Cdd:cd14229   2 YEVLDFLGRGTFGQVVKCWKRGTNEIVAVKILKNHP-SYARQGQIEVGILARLSNENADEFN-----FVRAYECFQHRNH 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   97 GSL------QDIYQV--TGSLSELQISyVCREVLQ----GLAYLHSQKKIHRDIKGANILIND----AGEVRLADFGISA 160
Cdd:cd14229  76 TCLvfemleQNLYDFlkQNKFSPLPLK-VIRPILQqvatALKKLKSLGLIHADLKPENIMLVDpvrqPYRVKVIDFGSAS 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  161 QIGATLARrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd14229 155 HVSKTVCS--TYLQSRYYRAPE---IILGLPFCEAIDMWSLGCVIAEL 197
PTKc_Syk cd05116
Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the ...
23-264 6.75e-10

Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. It is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for EGFR signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). The Syk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133247 [Multi-domain]  Cd Length: 257  Bit Score: 60.75  E-value: 6.75e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKA--RDKVSGDLVALKMVKMEPDDdvSTLQKEILilktcRHANIVAYHGSYLWLQKLWIC--------ME 92
Cdd:cd05116   3 LGSGNFGTVKKGyyQMKKVVKTVAVKILKNEAND--PALKDELL-----REANVMQQLDNPYIVRMIGICeaeswmlvME 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIGA--TLARRL 170
Cdd:cd05116  76 MAELGPLNKFLQKNRHVTEKNITELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAdeNYYKAQ 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  171 SFIGTPY-WMAPEVAAVaLKggYNELCDIWSLGITAIE-LAELQPPLFDVHPLRVLfLMTKSGyqpPRLKEKGKWSAAFH 248
Cdd:cd05116 156 THGKWPVkWYAPECMNY-YK--FSSKSDVWSFGVLMWEaFSYGQKPYKGMKGNEVT-QMIEKG---ERMECPAGCPPEMY 228
                       250
                ....*....|....*.
gi 6005810  249 NFIKVTLTKSPKKRPS 264
Cdd:cd05116 229 DLMKLCWTYDVDERPG 244
PTKc_DDR2 cd05095
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze ...
13-207 7.51e-10

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR2 results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens as well as collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. The DDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270677 [Multi-domain]  Cd Length: 297  Bit Score: 61.16  E-value: 7.51e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEV----------FKARD---KVSGD---LVALKMVKMEPDDDV-STLQKEILILKTCRHANIV 75
Cdd:cd05095   3 PRKLLTFKEKLGEGQFGEVhlceaegmekFMDKDfalEVSENqpvLVAVKMLRADANKNArNDFLKEIKIMSRLKDPNII 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   76 AYHGSYLWLQKLWICMEFCGAGSLQDIYQ--------------VTGSLSELQisYVCREVLQGLAYLHSQKKIHRDIKGA 141
Cdd:cd05095  83 RLLAVCITDDPLCMITEYMENGDLNQFLSrqqpegqlalpsnaLTVSYSDLR--FMAAQIASGMKYLSSLNFVHRDLATR 160
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6005810  142 NILINDAGEVRLADFGISAQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIE 207
Cdd:cd05095 161 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQgrAVLPIRWMSWE---SILLGKFTTASDVWAFGVTLWE 225
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
109-271 7.90e-10

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 60.80  E-value: 7.90e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  109 LSELQISYVCREVLQGLAYLHSQKK-IHRDIKGANILINDAGEVRLADFG--ISAQIGATLARRLSF---------IGTP 176
Cdd:cd14011 111 LYDVEIKYGLLQISEALSFLHNDVKlVHGNICPESVVINSNGEWKLAGFDfcISSEQATDQFPYFREydpnlpplaQPNL 190
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  177 YWMAPEvaaVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLF--LMTKSGYQPPRLKEKGkwSAAFHNFIKVT 254
Cdd:cd14011 191 NYLAPE---YILSKTCDPASDMFSLGVLIYAIYNKGKPLFDCVNNLLSYkkNSNQLRQLSLSLLEKV--PEELRDHVKTL 265
                       170
                ....*....|....*..
gi 6005810  255 LTKSPKKRPSATKMLSH 271
Cdd:cd14011 266 LNVTPEVRPDAEQLSKI 282
PTKc_Wee1b cd14139
Catalytic domain of the Protein Tyrosine Kinase, Wee1b; PTKs catalyze the transfer of the ...
20-271 8.05e-10

Catalytic domain of the Protein Tyrosine Kinase, Wee1b; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of human Wee1b (also called Wee2), Xenopus laevis Wee1a (XeWee1a) and similar vertebrate proteins. XeWee1a accumulates after exiting the metaphase II stage in oocytes and in early mitotic cells. It functions during the first zygotic cell division and not during subsequent divisions. Mammalian Wee2/Wee1b is an oocyte-specific inhibitor of meiosis that functions downstream of cAMP. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The Wee1b subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271041 [Multi-domain]  Cd Length: 274  Bit Score: 60.71  E-value: 8.05e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   20 LQRLGGGTYGEVFKARDKVSGDLVALKMvKMEPdddVSTLQKEILILKTC-------RHANIVAYHGSYLWLQKLWICME 92
Cdd:cd14139   5 LEKIGVGEFGSVYKCIKRLDGCVYAIKR-SMRP---FAGSSNEQLALHEVyahavlgHHPHVVRYYSAWAEDDHMIIQNE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   93 FCGAGSLQDIYQVTGSL----SELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI-------NDAGE----------- 150
Cdd:cd14139  81 YCNGGSLQDAISENTKSgnhfEEPELKDILLQVSMGLKYIHNSGLVHLDIKPSNIFIchkmqssSGVGEevsneedefls 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  151 ----VRLADFGISAQIGATLARRlsfiGTPYWMAPEVaavaLKGGYNEL--CDIWSLGITaIELAELQPPL----FDVHP 220
Cdd:cd14139 161 anvvYKIGDLGHVTSINKPQVEE----GDSRFLANEI----LQEDYRHLpkADIFALGLT-VALAAGAEPLptngAAWHH 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 6005810  221 LRvlflmtkSGYQPPRLKEkgkWSAAFHNFIKVTLTKSPKKRPSATKMLSH 271
Cdd:cd14139 232 IR-------KGNFPDVPQE---LPESFSSLLKNMIQPDPEQRPSATALARH 272
PTKc_Tyro3 cd05074
Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the ...
13-270 9.39e-10

Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Tyro3 is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Tyro3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270659 [Multi-domain]  Cd Length: 284  Bit Score: 60.70  E-value: 9.39e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKARDKV---SGDLVALKMVKME--PDDDVSTLQKEILILKTCRHANIVAYHGSYLWL--- 84
Cdd:cd05074   7 QEQQFTLGRMLGKGEFGSVREAQLKSedgSFQKVAVKMLKADifSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSrak 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   85 QKLWICM---EFCGAGSLQdIYQVTGSLSELQISYVCREVLQ-------GLAYLHSQKKIHRDIKGANILINDAGEVRLA 154
Cdd:cd05074  87 GRLPIPMvilPFMKHGDLH-TFLLMSRIGEEPFTLPLQTLVRfmidiasGMEYLSSKNFIHRDLAARNCMLNENMTVCVA 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  155 DFGISAQI-GATLARRLSFIGTPY-WMAPEVAAVALkggYNELCDIWSLGITAIELAEL-QPPLFDVHPLRVLFLMTKSG 231
Cdd:cd05074 166 DFGLSKKIySGDYYRQGCASKLPVkWLALESLADNV---YTTHSDVWAFGVTMWEIMTRgQTPYAGVENSEIYNYLIKGN 242
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 6005810  232 yqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd05074 243 ----RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 277
PKc_DYRK1 cd14226
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
15-217 1.08e-09

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. Mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A was previously called minibrain kinase homolog (MNBH) or dual-specificity YAK1-related kinase. It phosphorylates various substrates and is involved in many cellular events. It phosphorylates and inhibits the transcription factors, nuclear factor of activated T cells (NFAT) and forkhead in rhabdomyosarcoma (FKHR). It regulates neuronal differentiation by targetting CREB (cAMP response element-binding protein). It also targets many endocytic proteins including dynamin and amphiphysin and may play a role in the endocytic pathway. The gene encoding DYRK1A is located in the DSCR (Down syndrome critical region) of human chromosome 21 and DYRK1A has been implicated in the pathogenesis of DS. DYRK1B, also called minibrain-related kinase (MIRK), is highly expressed in muscle and plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271128 [Multi-domain]  Cd Length: 339  Bit Score: 60.80  E-value: 1.08e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKmepdDDVSTL---QKEILILKTCRHA------NIVAYHGSYLWLQ 85
Cdd:cd14226  13 DRYEIDSLIGKGSFGQVVKAYDHVEQEWVAIKIIK----NKKAFLnqaQIEVRLLELMNKHdtenkyYIVRLKRHFMFRN 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   86 KLWICMEFCgAGSLQDIYQVTG--SLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDA--GEVRLADFGIS 159
Cdd:cd14226  89 HLCLVFELL-SYNLYDLLRNTNfrGVSLNLTRKFAQQLCTALLFLSTPELsiIHCDLKPENILLCNPkrSAIKIIDFGSS 167
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  160 AQIGATLARrlsFIGTPYWMAPEVAavaLKGGYNELCDIWSLGITAIEL--AElqpPLFD 217
Cdd:cd14226 168 CQLGQRIYQ---YIQSRFYRSPEVL---LGLPYDLAIDMWSLGCILVEMhtGE---PLFS 218
PTKc_EphR_A cd05066
Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze ...
23-270 1.27e-09

Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10. Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphA receptors and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. EphRs comprise the largest subfamily of receptor PTKs (RTKs). EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270651 [Multi-domain]  Cd Length: 267  Bit Score: 59.88  E-value: 1.27e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   23 LGGGTYGEVFKARDKVSGD---LVALKMVKM-EPDDDVSTLQKEILILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGS 98
Cdd:cd05066  12 IGAGEFGEVCSGRLKLPGKreiPVAIKTLKAgYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTRSKPVMIVTEYMENGS 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   99 LQDIYQV-TGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQI-----------GATL 166
Cdd:cd05066  92 LDAFLRKhDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLeddpeaayttrGGKI 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  167 ARRlsfigtpyWMAPEvaAVALKgGYNELCDIWSLGITAIE-LAELQPPLFDVHPLRVLfLMTKSGYqppRLKEKGKWSA 245
Cdd:cd05066 172 PIR--------WTAPE--AIAYR-KFTSASDVWSYGIVMWEvMSYGERPYWEMSNQDVI-KAIEEGY---RLPAPMDCPA 236
                       250       260
                ....*....|....*....|....*
gi 6005810  246 AFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVS 261
STKc_HIPK2 cd14227
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; ...
17-208 1.55e-09

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors including homeodomain proteins (Nkx and HOX families), Smad1-4, Pax6, c-Myb, AML1, the histone acetyltransferase p300, and the tumor repressor p53, among others. It regulates gene transcription during development and in DNA damage response (DDR), and mediates cell processes such as apoptosis, survival, differentiation, and proliferation. HIPK2 mediates apoptosis by phosphorylating and activating p53 during DDR, resulting in the activation of apoptotic genes. In the absence of p53, HIPK2 targets the anti-apoptotic corepressor C-terminal binding protein (CtBP), leading to CtBP's degradation and the promotion of apoptosis. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271129 [Multi-domain]  Cd Length: 355  Bit Score: 60.49  E-value: 1.55e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   17 YDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPD-DDVSTLQKEILILKTCRHANIVAYHGSYLWLQ-KLWICMEFc 94
Cdd:cd14227  17 YEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSyARQGQIEVSILARLSTESADDYNFVRAYECFQhKNHTCLVF- 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   95 gAGSLQDIYQV--TGSLSELQISYVcREVLQGLAY----LHSQKKIHRDIKGANILINDAG----EVRLADFGISAQIGA 164
Cdd:cd14227  96 -EMLEQNLYDFlkQNKFSPLPLKYI-RPILQQVATalmkLKSLGLIHADLKPENIMLVDPSrqpyRVKVIDFGSASHVSK 173
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 6005810  165 TLARrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd14227 174 AVCS--TYLQSRYYRAPE---IILGLPFCEAIDMWSLGCVIAEL 212
STKc_HIPK1 cd14228
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; ...
15-208 1.63e-09

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK1 has been implicated in regulating eye size, lens formation, and retinal morphogenesis during late embryogenesis. It also contributes to the regulation of haematopoiesis and leukaemogenesis by phosphorylating and repressing the transcription factor c-Myb, which is crucial in T- and B-cell development. In glucose-deprived conditions, HIPK1 phosphorylates Daxx, leading to its relocalization from the nucleus to the cytoplasm, where it binds and stabilizes ASK1 (apoptosis signal-regulating kinase 1), a mitogen-activated protein kinase (MAPK) kinase kinase that activates the JNK and p38 MAPK pathways. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271130 [Multi-domain]  Cd Length: 355  Bit Score: 60.49  E-value: 1.63e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEPdDDVSTLQKEILILKTCRHANIVAYH--GSYLWLQ-KLWICM 91
Cdd:cd14228  15 NSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHP-SYARQGQIEVSILSRLSSENADEYNfvRSYECFQhKNHTCL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   92 EFcgAGSLQDIYQV--TGSLSELQISYVcREVLQ----GLAYLHSQKKIHRDIKGANILIND----AGEVRLADFGISAQ 161
Cdd:cd14228  94 VF--EMLEQNLYDFlkQNKFSPLPLKYI-RPILQqvatALMKLKSLGLIHADLKPENIMLVDpvrqPYRVKVIDFGSASH 170
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 6005810  162 IGATLARrlSFIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIEL 208
Cdd:cd14228 171 VSKAVCS--TYLQSRYYRAPE---IILGLPFCEAIDMWSLGCVIAEL 212
PTKc_DDR_like cd05097
Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the ...
13-213 1.69e-09

Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133228 [Multi-domain]  Cd Length: 295  Bit Score: 59.99  E-value: 1.69e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVF------------KARDKVSGD--LVALKMVKMEPDDDV-STLQKEILILKTCRHANIVAY 77
Cdd:cd05097   3 PRQQLRLKEKLGEGQFGEVHlceaeglaeflgEGAPEFDGQpvLVAVKMLRADVTKTArNDFLKEIKIMSRLKNPNIIRL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   78 HGSYLWLQKLWICMEFCGAGSL------QDIYQVTG------SLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILI 145
Cdd:cd05097  83 LGVCVSDDPLCMITEYMENGDLnqflsqREIESTFThannipSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6005810  146 NDAGEVRLADFGISAQIGATLARRLS--FIGTPYWMAPEvaaVALKGGYNELCDIWSLGITAIELAEL---QP 213
Cdd:cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQgrAVLPIRWMAWE---SILLGKFTTASDVWAFGVTLWEMFTLckeQP 232
PTKc_PDGFR_beta cd05107
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; ...
120-269 5.24e-09

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. The PDGFR beta subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133238 [Multi-domain]  Cd Length: 401  Bit Score: 59.25  E-value: 5.24e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  120 EVLQGLAYLHSQKKIHRDIKGANILINDAGEVRLADFGISAQIgatlARRLSFI--GTPY----WMAPEVAAVALkggYN 193
Cdd:cd05107 247 QVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI----MRDSNYIskGSTFlplkWMAPESIFNNL---YT 319
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6005810  194 ELCDIWSLGITAIELAELQPPLFDVHPLRVLFL-MTKSGYqppRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKML 269
Cdd:cd05107 320 TLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYnAIKRGY---RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393
STKc_TLK2 cd14041
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the ...
15-203 5.89e-09

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270943 [Multi-domain]  Cd Length: 309  Bit Score: 58.53  E-value: 5.89e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDVSTLQK----EILILKTCRHANIVAYHgSYLWLQKL 87
Cdd:cd14041   6 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKnwrDEKKENYHKhacrEYRIHKELDHPRIVKLY-DYFSLDTD 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WIC--MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDA---GEVRLADFGISA 160
Cdd:cd14041  85 SFCtvLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPpiIHYDLKPGNILLVNGtacGEIKITDFGLSK 164
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 6005810  161 QI---------GATLARRLSfiGTPYWMAPEVAAVALK-GGYNELCDIWSLGI 203
Cdd:cd14041 165 IMdddsynsvdGMELTSQGA--GTYWYLPPECFVVGKEpPKISNKVDVWSVGV 215
pk1 PHA03390
serine/threonine-protein kinase 1; Provisional
71-208 6.20e-09

serine/threonine-protein kinase 1; Provisional


Pssm-ID: 223069 [Multi-domain]  Cd Length: 267  Bit Score: 57.94  E-value: 6.20e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810    71 HANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKKIHRDIKGANILINDA-G 149
Cdd:PHA03390  68 NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAkD 147
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   150 EVRLADFGISAQIGATLARRlsfiGTPYWMAPEvaavALKG-GYNELCDIWSLGITAIEL 208
Cdd:PHA03390 148 RIYLCDYGLCKIIGTPSCYD----GTLDYFSPE----KIKGhNYDVSFDWWAVGVLTYEL 199
STKc_TLK1 cd14040
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the ...
15-203 6.38e-09

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A splice variant of TLK1, called TLK1B, is expressed in the presence of double strand breaks (DSBs). It lacks the N-terminal part of TLK1, but is expected to phosphorylate the same substrates. TLK1/1B interacts with Rad9, which is critical in DNA damage-activated checkpoint response, and plays a role in the repair of linearized DNA with incompatible ends. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. The TLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270942 [Multi-domain]  Cd Length: 299  Bit Score: 58.14  E-value: 6.38e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   15 DHYDLLQRLGGGTYGEVFKARDKVSGDLVALKMVKMEP---DDDVSTLQK----EILILKTCRHANIVAYHgSYLWLQKL 87
Cdd:cd14040   6 ERYLLLHLLGRGGFSEVYKAFDLYEQRYAAVKIHQLNKswrDEKKENYHKhacrEYRIHKELDHPRIVKLY-DYFSLDTD 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   88 WIC--MEFCGAGSLQDIYQVTGSLSELQISYVCREVLQGLAYLHSQKK--IHRDIKGANILINDA---GEVRLADFGISA 160
Cdd:cd14040  85 TFCtvLEYCEGNDLDFYLKQHKLMSEKEARSIVMQIVNALRYLNEIKPpiIHYDLKPGNILLVDGtacGEIKITDFGLSK 164
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 6005810  161 QI--------GATLARRLSfiGTPYWMAPEVAAVALK-GGYNELCDIWSLGI 203
Cdd:cd14040 165 IMdddsygvdGMDLTSQGA--GTYWYLPPECFVVGKEpPKISNKVDVWSVGV 214
PTKc_IGF-1R cd05062
Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor; PTKs ...
13-270 6.93e-09

Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor PTK (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. The IGF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133193 [Multi-domain]  Cd Length: 277  Bit Score: 57.74  E-value: 6.93e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   13 PRDHYDLLQRLGGGTYGEVFKArdkvsgdlVALKMVKMEPD--------DDVSTLQKEILILK--------TCRHanIVA 76
Cdd:cd05062   4 AREKITMSRELGQGSFGMVYEG--------IAKGVVKDEPEtrvaiktvNEAASMRERIEFLNeasvmkefNCHH--VVR 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810   77 YHGSYLWLQKLWICMEFCGAG-------SLQDIYQVTGSLSELQISYVCR---EVLQGLAYLHSQKKIHRDIKGANILIN 146
Cdd:cd05062  74 LLGVVSQGQPTLVIMELMTRGdlksylrSLRPEMENNPVQAPPSLKKMIQmagEIADGMAYLNANKFVHRDLAARNCMVA 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6005810  147 DAGEVRLADFGISAQIGATLARRLSFIG--TPYWMAPEvaavALKGG-YNELCDIWSLGITAIELAEL-QPPLFDVHPLR 222
Cdd:cd05062 154 EDFTVKIGDFGMTRDIYETDYYRKGGKGllPVRWMSPE----SLKDGvFTTYSDVWSFGVVLWEIATLaEQPYQGMSNEQ 229
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 6005810  223 VLFLMTKSGYqpprLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLS 270
Cdd:cd05062 230 VLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 273
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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