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paired mesoderm homeobox protein 1 isoform a [Mus musculus]
homeobox domain-containing protein( domain architecture ID 11079034)
homeobox domain-containing protein may be involved in the transcriptional regulation of key eukaryotic developmental processes; also contains an OAR domain
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
Homeodomain | pfam00046 | Homeodomain; |
99-151 | 5.39e-26 | ||
Homeodomain; : Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 96.03 E-value: 5.39e-26
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
219-235 | 2.32e-03 | ||
OAR motif; The entry represents the OAR motif. : Pssm-ID: 461067 Cd Length: 19 Bit Score: 34.69 E-value: 2.32e-03
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
99-151 | 5.39e-26 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 96.03 E-value: 5.39e-26
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
99-153 | 1.37e-21 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 84.60 E-value: 1.37e-21
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
99-150 | 8.34e-21 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 82.68 E-value: 8.34e-21
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
105-185 | 3.65e-12 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 62.45 E-value: 3.65e-12
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
219-235 | 2.32e-03 | |||
OAR motif; The entry represents the OAR motif. Pssm-ID: 461067 Cd Length: 19 Bit Score: 34.69 E-value: 2.32e-03
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
99-151 | 5.39e-26 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 96.03 E-value: 5.39e-26
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
99-153 | 1.37e-21 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 84.60 E-value: 1.37e-21
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
99-150 | 8.34e-21 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 82.68 E-value: 8.34e-21
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
105-185 | 3.65e-12 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 62.45 E-value: 3.65e-12
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
219-235 | 2.32e-03 | |||
OAR motif; The entry represents the OAR motif. Pssm-ID: 461067 Cd Length: 19 Bit Score: 34.69 E-value: 2.32e-03
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Blast search parameters | ||||
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