|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.99e-53 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 163.17 E-value: 1.99e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 14141924 81 QLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
3.24e-50 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 154.77 E-value: 3.24e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 3 MVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAIQL 82
Cdd:MTH00069 1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80
|
90 100 110
....*....|....*....|....*....|....
gi 14141924 83 PQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00069 81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
2-115 |
1.74e-49 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 153.11 E-value: 1.74e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 2 NMVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 14141924 82 LPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWA 115
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
9.77e-42 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 133.53 E-value: 9.77e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVtFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00106 1 MNLM-LTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
|
90 100 110
....*....|....*....|....*....|....*.
gi 14141924 81 QLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00106 80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
8.85e-35 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 115.85 E-value: 8.85e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 14141924 81 QLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
2.35e-32 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 109.60 E-value: 2.35e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAi 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS- 79
|
90 100 110
....*....|....*....|....*....|....
gi 14141924 81 qLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEW 114
Cdd:MTH00203 80 -NQLSSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.74e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 96.85 E-value: 2.74e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLAQM-NPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 14141924 80 IQLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
20-113 |
2.95e-27 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 95.95 E-value: 2.95e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 20 TINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLPQPLLTLLWTSMILLLL 99
Cdd:pfam00507 2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIFIAI 79
|
90
....*....|....*
gi 14141924 100 TLG-LAYEWMQGGLE 113
Cdd:pfam00507 80 LLVgLVYAWKKGALE 94
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
4-114 |
3.60e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 91.31 E-value: 3.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 4 VTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLP 83
Cdd:MTH00055 8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85
|
90 100 110
....*....|....*....|....*....|..
gi 14141924 84 QPLLTLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:MTH00055 86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
6.84e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 90.82 E-value: 6.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWL-AQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 14141924 80 IQLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWAE 116
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
8-115 |
9.24e-24 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 88.00 E-value: 9.24e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 8 LLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLPQPLL 87
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 14141924 88 TLLWTSMILLLLTLG-LAYEWMQGGLEWA 115
Cdd:PRK06602 93 LGFVEAMIFILVLLVgLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-114 |
1.11e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 87.52 E-value: 1.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 3 MVTFMLLLSFTLCTILTTINFWLAQMNP-DTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 14141924 82 LPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEW 114
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
6-114 |
3.74e-23 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 86.27 E-value: 3.74e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 6 FMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLPQP 85
Cdd:MTH00018 5 ILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQI 82
|
90 100 110
....*....|....*....|....*....|
gi 14141924 86 LLTLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:MTH00018 83 APFGFWTMVGFLFILTLgLIYEWIKGGLEW 112
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
4-114 |
1.29e-22 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 84.79 E-value: 1.29e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 4 VTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLP 83
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85
|
90 100 110
....*....|....*....|....*....|..
gi 14141924 84 QPLLTLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:COG0838 86 ELGWFGLIEMLVFIAILLVgLIYAWKKGALEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
2.58e-20 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 79.13 E-value: 2.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLA-QMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 14141924 80 IQLPQPLLTLLWTSMILLLLTLGLAYEWMQGGLEWA 115
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
4-114 |
1.50e-17 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 72.27 E-value: 1.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 4 VTFMLLLSFTLCTILTTINFWLAQ-----MNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPW 78
Cdd:MTH00030 8 IFFSTLLGVGIILLLVSISFTLGNsriglTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPW 85
|
90 100 110
....*....|....*....|....*....|....*..
gi 14141924 79 AIQLPQPLLTLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:MTH00030 86 SIVFNQLNLFSFWIVYTFLIVLAIgLAYEWIKGGLEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
34-114 |
1.80e-09 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 51.21 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 34 KLSPYECGFDPLGSARLP--FSIRFFLMAILFLLFDLEIALLLPlpWAIQLPQPLLTLLwTSMILLLLTLGLAY--EWMQ 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGL-VEMALFMLTVFVAYayVWRR 113
|
....*
gi 14141924 110 GGLEW 114
Cdd:PRK07928 114 GGLEW 118
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
8-114 |
9.37e-09 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 49.22 E-value: 9.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 8 LLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLlpLPWAIQLPQPLL 87
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 14141924 88 TLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:CHL00022 92 SAFIEALIFVLILIVgLVYAWRKGALEW 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
3-114 |
5.40e-08 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 47.43 E-value: 5.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 3 MVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPlpWAIQL 82
Cdd:PRK07756 11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAY 88
|
90 100 110
....*....|....*....|....*....|...
gi 14141924 83 PQPLLTLLWTSMILLLLTLG-LAYEWMQGGLEW 114
Cdd:PRK07756 89 DKLGLFALIEMLIFVVMLLVgLAYAWKKKVLQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
4-80 |
1.06e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 46.97 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141924 4 VTFMLLL---SFTLCTIL-TTINFWLAQMNPDTEKLSPYECGFDPLGSARlPFSIRFFLMAILFLLFDLEIALLlpLPWA 79
Cdd:PRK08489 13 VFVLLVLtfvAFFLTTRLaRFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
|
.
gi 14141924 80 I 80
Cdd:PRK08489 90 V 90
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-74 |
1.37e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 46.04 E-value: 1.37e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14141924 1 MNMVTFMLLLSFTLCTILTTINFWLAQMNPDTEKLSPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLL 74
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-77 |
1.91e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.95 E-value: 1.91e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 14141924 36 SPYECGFDPLGSARLPFSIRFFLMAILFLLFDLEIALLLPLP 77
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|