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uncharacterized protein ECU08_1630 [Encephalitozoon cuniculi GB-M1]
CPSF4/YTH1 family protein( domain architecture ID 11473782)
CPSF4/YTH1 family protein similar to Homo sapiens cleavage and polyadenylation specificity factor subunit 4, as well as Saccharomyces cerevisiae mRNA 3'-end-processing protein YTH1 and zinc finger protein LEE1
List of domain hits
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Name | Accession | Description | Interval | E-value | |||||
YTH1 | COG5084 | Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin ... |
1-286 | 3.38e-97 | |||||
Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]; : Pssm-ID: 227416 [Multi-domain] Cd Length: 285 Bit Score: 288.31 E-value: 3.38e-97
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Name | Accession | Description | Interval | E-value | |||||
YTH1 | COG5084 | Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin ... |
1-286 | 3.38e-97 | |||||
Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]; Pssm-ID: 227416 [Multi-domain] Cd Length: 285 Bit Score: 288.31 E-value: 3.38e-97
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zf_CCCH_4 | pfam18345 | Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch ... |
5-23 | 1.01e-05 | |||||
Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch domain-containing proteins such as ZIP. Functional studies indicate that ZIP specifically targets EGFR and represses its transcription, and that the zinc finger and the coiled-coil domains are central to that process. Pssm-ID: 465719 [Multi-domain] Cd Length: 19 Bit Score: 41.63 E-value: 1.01e-05
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ZnF_C3H1 | smart00356 | zinc finger; |
4-25 | 3.28e-04 | |||||
zinc finger; Pssm-ID: 214632 [Multi-domain] Cd Length: 27 Bit Score: 37.22 E-value: 3.28e-04
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Name | Accession | Description | Interval | E-value | |||||
YTH1 | COG5084 | Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin ... |
1-286 | 3.38e-97 | |||||
Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]; Pssm-ID: 227416 [Multi-domain] Cd Length: 285 Bit Score: 288.31 E-value: 3.38e-97
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zf_CCCH_4 | pfam18345 | Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch ... |
5-23 | 1.01e-05 | |||||
Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch domain-containing proteins such as ZIP. Functional studies indicate that ZIP specifically targets EGFR and represses its transcription, and that the zinc finger and the coiled-coil domains are central to that process. Pssm-ID: 465719 [Multi-domain] Cd Length: 19 Bit Score: 41.63 E-value: 1.01e-05
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ZnF_C3H1 | smart00356 | zinc finger; |
4-25 | 3.28e-04 | |||||
zinc finger; Pssm-ID: 214632 [Multi-domain] Cd Length: 27 Bit Score: 37.22 E-value: 3.28e-04
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zf-CCCH_4 | pfam18044 | CCCH-type zinc finger; This short zinc binding domain has the pattern of three cysteines and ... |
3-23 | 6.77e-04 | |||||
CCCH-type zinc finger; This short zinc binding domain has the pattern of three cysteines and one histidine to coordinate the zinc ion. This domain is found in a wide variety of proteins such as E3 ligases. Pssm-ID: 465626 Cd Length: 22 Bit Score: 36.41 E-value: 6.77e-04
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zf-CCCH | pfam00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar); |
2-25 | 1.47e-03 | |||||
Zinc finger C-x8-C-x5-C-x3-H type (and similar); Pssm-ID: 459885 [Multi-domain] Cd Length: 27 Bit Score: 35.63 E-value: 1.47e-03
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Blast search parameters | ||||
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