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Conserved domains on  [gi|304555610|ref|NP_689560|]
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EF-hand calcium-binding domain-containing protein 13 isoform A [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
EF-hand_11 super family cl25355
EF-hand domain; This domain is found predominantly in DJ binding proteins.
 440-522 3.22e-04

EF-hand domain; This domain is found predominantly in DJ binding proteins.


The actual alignment was detected with superfamily member pfam08976:

Pssm-ID: 401068  Cd Length: 105  Bit Score: 40.86  E-value: 3.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304555610  440 SSLQKQVSSTEKTAISTLENFceaiSKLQENYIAAEELQSILPSTGINLLDEEFQKIVTDTSRNENGMVELDDFVNALAK 519
Cdd:pfam08976   9 ARLHKAVASHYHAITQEFENF----DTLKSNTISRDEFRAICNRHIQILTDEQFDRLWNELPVNAKGRLKYPDFLSKFSI 84


                  ...
gi 304555610  520 ERS 522
Cdd:pfam08976  85 ERT 87
 
Name Accession Description Interval E-value
EF-hand_11 pfam08976
EF-hand domain; This domain is found predominantly in DJ binding proteins.
 440-522 3.22e-04

EF-hand domain; This domain is found predominantly in DJ binding proteins.


Pssm-ID: 401068  Cd Length: 105  Bit Score: 40.86  E-value: 3.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304555610  440 SSLQKQVSSTEKTAISTLENFceaiSKLQENYIAAEELQSILPSTGINLLDEEFQKIVTDTSRNENGMVELDDFVNALAK 519
Cdd:pfam08976   9 ARLHKAVASHYHAITQEFENF----DTLKSNTISRDEFRAICNRHIQILTDEQFDRLWNELPVNAKGRLKYPDFLSKFSI 84


                  ...
gi 304555610  520 ERS 522
Cdd:pfam08976  85 ERT 87
 
Name Accession Description Interval E-value
EF-hand_11 pfam08976
EF-hand domain; This domain is found predominantly in DJ binding proteins.
 440-522 3.22e-04

EF-hand domain; This domain is found predominantly in DJ binding proteins.


Pssm-ID: 401068  Cd Length: 105  Bit Score: 40.86  E-value: 3.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304555610  440 SSLQKQVSSTEKTAISTLENFceaiSKLQENYIAAEELQSILPSTGINLLDEEFQKIVTDTSRNENGMVELDDFVNALAK 519
Cdd:pfam08976   9 ARLHKAVASHYHAITQEFENF----DTLKSNTISRDEFRAICNRHIQILTDEQFDRLWNELPVNAKGRLKYPDFLSKFSI 84


                  ...
gi 304555610  520 ERS 522
Cdd:pfam08976  85 ERT 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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