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transcription factor RFX4 isoform c [Homo sapiens]
RFX family transcription factor( domain architecture ID 10491531)
RFX family transcription factor activates transcription by binding to the X-box in the promoter of target genes; similar to human transcription factor RFX3
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
RFX_DNA_binding | pfam02257 | RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II ... |
58-136 | 6.58e-42 | ||
RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD). : Pssm-ID: 460512 Cd Length: 79 Bit Score: 146.93 E-value: 6.58e-42
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Name | Accession | Description | Interval | E-value | ||
RFX_DNA_binding | pfam02257 | RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II ... |
58-136 | 6.58e-42 | ||
RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD). Pssm-ID: 460512 Cd Length: 79 Bit Score: 146.93 E-value: 6.58e-42
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COG3378 | COG3378 | DNA primase, phage- or plasmid-associated [Mobilome: prophages, transposons]; |
63-140 | 4.89e-09 | ||
DNA primase, phage- or plasmid-associated [Mobilome: prophages, transposons]; Pssm-ID: 442605 [Multi-domain] Cd Length: 403 Bit Score: 59.18 E-value: 4.89e-09
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Name | Accession | Description | Interval | E-value | ||
RFX_DNA_binding | pfam02257 | RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II ... |
58-136 | 6.58e-42 | ||
RFX DNA-binding domain; RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD). Pssm-ID: 460512 Cd Length: 79 Bit Score: 146.93 E-value: 6.58e-42
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COG3378 | COG3378 | DNA primase, phage- or plasmid-associated [Mobilome: prophages, transposons]; |
63-140 | 4.89e-09 | ||
DNA primase, phage- or plasmid-associated [Mobilome: prophages, transposons]; Pssm-ID: 442605 [Multi-domain] Cd Length: 403 Bit Score: 59.18 E-value: 4.89e-09
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Blast search parameters | ||||
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