RecName: Full=Immunoglobulin mu Fc receptor; Short=IgM FcR; AltName: Full=Fas apoptotic inhibitory molecule 3; Short=FAIM3; AltName: Full=Regulator of Fas-induced apoptosis Toso; Flags: Precursor
immunoglobulin domain-containing protein; immunoglobulin domain-containing family protein( domain architecture ID 12944272)
immunoglobulin (Ig) domain-containing protein adopts a fold comprised of a sandwich of two beta sheets and may function in cell adhesion and pattern recognition; immunoglobulin (Ig) domain-containing family protein is a member of a large superfamily containing cell surface antigen receptors, co-receptors and co-stimulatory molecules of the immune system, molecules involved in antigen presentation to lymphocytes, cell adhesion molecules, certain cytokine receptors and intracellular muscle proteins; immunoglobulin domains are typically divided into 4 main classes based on their structures and sequences: the Variable (V), Constant 1 (C1), Constant 2 (C2), and Intermediate (I) sets
List of domain hits
Name | Accession | Description | Interval | E-value | |||
IgV_pIgR_like | cd05716 | Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The ... |
24-121 | 2.43e-27 | |||
Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The members here are composed of the immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins. pIgR delivers dimeric IgA and pentameric IgM to mucosal secretions. Polymeric immunoglobulin (pIgs) are the first defense against pathogens and toxins. IgA and IgM can form polymers via an 18-residue extension at their C-termini referred to as the tailpiece. pIgR transports pIgs across mucosal epithelia into mucosal secretions. Human pIgR is a glycosylated type I transmembrane protein, comprised of a 620-residue extracellular region, a 23-residue transmembrane region, and a 103-residue cytoplasmic tail. The extracellular region contains five domains that share sequence similarity with Ig variable (v) regions. This group also contains the Ig-like extracellular domains of other receptors such as NK cell receptor Nkp44 and myeloid receptors, among others. : Pssm-ID: 409381 Cd Length: 100 Bit Score: 104.02 E-value: 2.43e-27
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DUF5434 super family | cl38773 | Family of unknown function (DUF5434); This is a family of unknown function found in ... |
186-333 | 5.85e-03 | |||
Family of unknown function (DUF5434); This is a family of unknown function found in Varicellovirus. The actual alignment was detected with superfamily member pfam17502: Pssm-ID: 340217 Cd Length: 189 Bit Score: 37.53 E-value: 5.85e-03
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Name | Accession | Description | Interval | E-value | |||
IgV_pIgR_like | cd05716 | Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The ... |
24-121 | 2.43e-27 | |||
Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The members here are composed of the immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins. pIgR delivers dimeric IgA and pentameric IgM to mucosal secretions. Polymeric immunoglobulin (pIgs) are the first defense against pathogens and toxins. IgA and IgM can form polymers via an 18-residue extension at their C-termini referred to as the tailpiece. pIgR transports pIgs across mucosal epithelia into mucosal secretions. Human pIgR is a glycosylated type I transmembrane protein, comprised of a 620-residue extracellular region, a 23-residue transmembrane region, and a 103-residue cytoplasmic tail. The extracellular region contains five domains that share sequence similarity with Ig variable (v) regions. This group also contains the Ig-like extracellular domains of other receptors such as NK cell receptor Nkp44 and myeloid receptors, among others. Pssm-ID: 409381 Cd Length: 100 Bit Score: 104.02 E-value: 2.43e-27
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V-set | pfam07686 | Immunoglobulin V-set domain; This domain is found in antibodies as well as neural protein P0 ... |
21-123 | 3.80e-13 | |||
Immunoglobulin V-set domain; This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Pssm-ID: 462230 Cd Length: 109 Bit Score: 65.17 E-value: 3.80e-13
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IGv | smart00406 | Immunoglobulin V-Type; |
63-104 | 4.03e-04 | |||
Immunoglobulin V-Type; Pssm-ID: 214650 Cd Length: 81 Bit Score: 38.90 E-value: 4.03e-04
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DUF5434 | pfam17502 | Family of unknown function (DUF5434); This is a family of unknown function found in ... |
186-333 | 5.85e-03 | |||
Family of unknown function (DUF5434); This is a family of unknown function found in Varicellovirus. Pssm-ID: 340217 Cd Length: 189 Bit Score: 37.53 E-value: 5.85e-03
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Name | Accession | Description | Interval | E-value | |||
IgV_pIgR_like | cd05716 | Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The ... |
24-121 | 2.43e-27 | |||
Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins; The members here are composed of the immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins. pIgR delivers dimeric IgA and pentameric IgM to mucosal secretions. Polymeric immunoglobulin (pIgs) are the first defense against pathogens and toxins. IgA and IgM can form polymers via an 18-residue extension at their C-termini referred to as the tailpiece. pIgR transports pIgs across mucosal epithelia into mucosal secretions. Human pIgR is a glycosylated type I transmembrane protein, comprised of a 620-residue extracellular region, a 23-residue transmembrane region, and a 103-residue cytoplasmic tail. The extracellular region contains five domains that share sequence similarity with Ig variable (v) regions. This group also contains the Ig-like extracellular domains of other receptors such as NK cell receptor Nkp44 and myeloid receptors, among others. Pssm-ID: 409381 Cd Length: 100 Bit Score: 104.02 E-value: 2.43e-27
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V-set | pfam07686 | Immunoglobulin V-set domain; This domain is found in antibodies as well as neural protein P0 ... |
21-123 | 3.80e-13 | |||
Immunoglobulin V-set domain; This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Pssm-ID: 462230 Cd Length: 109 Bit Score: 65.17 E-value: 3.80e-13
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IGv | smart00406 | Immunoglobulin V-Type; |
63-104 | 4.03e-04 | |||
Immunoglobulin V-Type; Pssm-ID: 214650 Cd Length: 81 Bit Score: 38.90 E-value: 4.03e-04
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IG_like | smart00410 | Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG. |
25-122 | 1.12e-03 | |||
Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG. Pssm-ID: 214653 [Multi-domain] Cd Length: 85 Bit Score: 37.87 E-value: 1.12e-03
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DUF5434 | pfam17502 | Family of unknown function (DUF5434); This is a family of unknown function found in ... |
186-333 | 5.85e-03 | |||
Family of unknown function (DUF5434); This is a family of unknown function found in Varicellovirus. Pssm-ID: 340217 Cd Length: 189 Bit Score: 37.53 E-value: 5.85e-03
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Blast search parameters | ||||
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