|
Name |
Accession |
Description |
Interval |
E-value |
| MurC |
COG0773 |
UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall ... |
7-449 |
3.72e-180 |
|
UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440536 [Multi-domain] Cd Length: 451 Bit Score: 510.76 E-value: 3.72e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 7 KKIYFCGIGGIGMSALAQLLNKEGKTVFGSDLVSSTIIKNLKKQNIKVTIQQSGSVLaKDTDLLIYSSAVPAHHPERQKA 86
Cdd:COG0773 5 MHIHFIGIGGIGMSGLAEILLALGYKVSGSDLAESPMTERLEALGIPVFIGHDAENI-DDADLVVVSSAIPRDNPELVAA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 87 KILGIASLSYFEALGQYSQQFeKVIAISGTHGKSTTTAMIASVLIAAKLDPTVIVGSIMKELKSNARAGQKKYLVVEACE 166
Cdd:COG0773 84 RERGIPVLSRAEMLAELMRGK-RSIAVAGTHGKTTTTSMLAHILEEAGLDPTFLIGGILNNFGTNARLGDGDYFVAEADE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 167 HQEHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDL--GCDCRLVTYGLENTAEY 244
Cdd:COG0773 163 SDGSFLHYSPDIAVVTNIEADHLDIYGDLEAIKEAFHEFARNVPFYGLLVLCADDPGLRELlpRCGRPVITYGFSEDADY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 245 TATEVCTLKKQQHF------VSLGsEFILNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEAIGKYRGA 318
Cdd:COG0773 243 RAENIRIDGGGSTFdvlrrgEELG-EVELNLPGRHNVLNALAAIAVALELGVDPEAIAEALASFKGVKRRFELKGEVGGV 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 319 TVISDYAHHPTAIHSTIRAAREFYPKQRIVLVFQPHQRSRTQKLFDKFVNCFTEADFVIIQEIYdvAGREDQKIRISSQD 398
Cdd:COG0773 322 TVIDDYAHHPTEIAATLAAAREKYPDRRLVAVFQPHRYSRTRDFLDEFAEALSLADEVILLDIY--AAREKPIPGVSSED 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1088016462 399 LVKAIEKKGKYAFYTKTVTQTRHKIDEVLDKNDVLLIMGAGDIYKLGEKLV 449
Cdd:COG0773 400 LAEAIRKRGKDVVYVPDLDELVEALAEIARPGDVVLTMGAGDIGGLGEKLL 450
|
|
| murC |
TIGR01082 |
UDP-N-acetylmuramate--L-alanine ligase; This model describes the MurC protein in bacterial ... |
8-449 |
6.90e-147 |
|
UDP-N-acetylmuramate--L-alanine ligase; This model describes the MurC protein in bacterial peptidoglycan (murein) biosynthesis. In a few species (Mycobacterium leprae, the Chlamydia), the amino acid may be L-serine or glycine instead of L-alanine. A related protein, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by model TIGR01081. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273433 [Multi-domain] Cd Length: 448 Bit Score: 425.95 E-value: 6.90e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 8 KIYFCGIGGIGMSALAQLLNKEGKTVFGSDLVSSTIIKNLKKQNIKVTIQQSGSVLaKDTDLLIYSSAVPAHHPERQKAK 87
Cdd:TIGR01082 1 KIHFVGIGGIGMSGIAEILLNRGYQVSGSDIAENATTKRLEALGIPIYIGHSAENL-DDADVVVVSAAIKDDNPEIVEAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 88 ILGIASLSYFEALGQYSQqFEKVIAISGTHGKSTTTAMIASVLIAAKLDPTVIVGSIMKELKSNARAGQKKYLVVEACEH 167
Cdd:TIGR01082 80 ERGIPVIRRAEMLAELMR-FRHSIAVAGTHGKTTTTAMIAVILKEAGLDPTVVVGGLVKEAGTNARLGSGEYLVAEADES 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 168 QEHMLQLHPQMIVLTNIEEDHLD-YYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDLGCDCR--LVTYGLEN-TAE 243
Cdd:TIGR01082 159 DASFLHLQPNVAIVTNIEPDHLDtYGSSFERLKAAFEKFIHNLPFYGLAVICADDPVLRELVPKATeqVITYGGSGeDAD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 244 YTATEVCTLKKQQHF-----VSLGSEFILNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEAIGKYRGA 318
Cdd:TIGR01082 239 YRAENIQQSGAEGKFsvrgkGKLYLEFTLNLPGRHNVLNALAAIAVALELGIDFEAILRALANFQGVKRRFEILGEFGGV 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 319 TVISDYAHHPTAIHSTIRAAREFYPKQRIVLVFQPHQRSRTQKLFDKFVNCFTEADFVIIQEIYDvAGREDqKIRISSQD 398
Cdd:TIGR01082 319 LLIDDYAHHPTEIKATLKAARQGYPDKRIVVVFQPHRYSRTRDLFDDFAKVLSDADELILLDIYA-AGEEP-INGIDGKS 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1088016462 399 LVKAIEKKGKY-AFYTKTVTQTRHKIDEVLDKNDVLLIMGAGDIYKLGEKLV 449
Cdd:TIGR01082 397 LARKITQLGKIePYFVPDLAELVEFLAAVLQSGDLILTMGAGDIIKLARELL 448
|
|
| PRK14573 |
PRK14573 |
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase; |
10-448 |
4.79e-59 |
|
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase;
Pssm-ID: 184752 [Multi-domain] Cd Length: 809 Bit Score: 206.98 E-value: 4.79e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 10 YFCGIGGIGMSALAQLLNKEGKTVFGSDLVSSTIIKNLKKQNIKVTIQQSGSVLAKDTdLLIYSSAVPAHHPERQKAKIL 89
Cdd:PRK14573 8 HFIGIGGIGMSALAHILLDRGYSVSGSDLSEGKTVEKLKAKGARFFLGHQEEHVPEDA-VVVYSSSISKDNVEYLSAKSR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 90 GIASLSYFEALGQYSQQFEKvIAISGTHGKSTTTAMIASVLIAAKLDPTVIVGSiMKELKSNARAGQKKYLVVEACEHQE 169
Cdd:PRK14573 87 GNRLVHRAELLAELMQEQIS-ILVSGSHGKTTVSSLITAIFQEAKKDPSYAIGG-LNQEGLNGYSGSSEYFVAEADESDG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 170 HMLQLHPQMIVLTNIEEDHLDYYH-NLDHIVMAFQKYINHLPADGILIKNNDDSESR----------DLGCDCRLVTYGL 238
Cdd:PRK14573 165 SLKHYTPEFSVITNIDNEHLSNFEgDRELLLASIQDFARKVQQINKCFYNGDCPRLKgclqghsygfSSSCDLHILSYYQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 239 ENTAEYTAtevctlkkqqhFVSLGSEFI---LNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEAIGKY 315
Cdd:PRK14573 245 EGWRSYFS-----------AKFLGVVYQdieLNLVGMHNVANAAAAMGIALTLGIDEGAIRNALKGFSGVQRRLERKNSS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 316 RGATVISDYAHHPTAIHSTIRAAREFYPKQRIVLVFQPHQRSRTQKLFDKFVNCFTEADFVIIQEIYDvAGREDQKIrIS 395
Cdd:PRK14573 314 ETFLFLEDYAHHPSEISCTLRAVRDAVGLRRIIAICQPHRFSRLRECLDSFPSAFQDADEVILTDVYS-AGEEPEDS-IS 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1088016462 396 SQDLVKAIEKKGkyafYTKTVTQTRHKIDEVLDKN----DVLLIMGAGDIYKLGEKL 448
Cdd:PRK14573 392 YQKLAEAISQSS----IVKCTYVPFHEIQRYLEQSirvhDVCVSLGAGNIYTLGEAL 444
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
5-349 |
3.09e-44 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 160.25 E-value: 3.09e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 5 QAKKIYFCGIGGIGMSAlAQLLNKEGKTVFGSDLVSSTIIKN--LKKQNIKVTIQQSGSVLAKDTDLLIYSSAVPAHHPE 82
Cdd:COG0771 3 KGKKVLVLGLGKSGLAA-ARLLAKLGAEVTVSDDRPAPELAAaeLEAPGVEVVLGEHPEELLDGADLVVKSPGIPPDHPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 83 RQKAKILGIASLSYFEALGQYSQQfeKVIAISGTHGKSTTTAMIASVLIAAKLDpTVIVG----SIMKELKSNARAGqkk 158
Cdd:COG0771 82 LKAARAAGIPVIGEIELAYRLSPA--PIIAITGTNGKTTTTTLIGHILKAAGLR-VAVGGnigtPLLDLLLEPEPPD--- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 159 YLVVEACEHQ-EHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDLG--CDCRLVT 235
Cdd:COG0771 156 VYVLELSSFQlETTPSLRPDVAVILNITPDHLDRHGSMEAYAAAKARIFANQTPDDYAVLNADDPLTRALAeeAKARVVP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 236 YGLENTAEYTA----TEVCTLKKQQHFVSLGSefiLNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEA 311
Cdd:COG0771 236 FSLKEPLEGGAgledGKLVDRASGEELLPVDD---LRLPGRHNLENALAALAAARALGVPPEAIREALRSFKGLPHRLEF 312
|
330 340 350
....*....|....*....|....*....|....*....
gi 1088016462 312 IGKYRGATVISD-YAhhpTAIHSTIRAAREFypKQRIVL 349
Cdd:COG0771 313 VAEINGVRFINDsKA---TNPDATLAALESF--DGPVVL 346
|
|
| MurE |
COG0769 |
UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; ... |
87-351 |
1.89e-39 |
|
UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl tripeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440532 [Multi-domain] Cd Length: 459 Bit Score: 147.53 E-value: 1.89e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 87 KILGIASLSYFealgQYSQQFEKVIAISGTHGKSTTTAMIASVLIAAKLdPTVIVGSIM-----KELKSN---------- 151
Cdd:COG0769 63 AALALLAAAFY----GHPSQKLKLIGVTGTNGKTTTTYLLAQILRALGK-KTGLIGTVGngiggELIPSSlttpealdlq 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 152 ---ARAGQK--KYLVVEACEH---QEHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSE 223
Cdd:COG0769 138 rllAEMVDAgvTHVVMEVSSHaldQGRVDGVRFDVAVFTNLTRDHLDYHGTMEAYFAAKARLFDQLGPGGAAVINADDPY 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 224 SRDL--GCDCRLVTYGLENTAEYTATEVCTLKKQQHFV---SLGS-EFILNIPGRFNVANAMACIAACRVLGIKDSVMQI 297
Cdd:COG0769 218 GRRLaaAAPARVITYGLKADADLRATDIELSADGTRFTlvtPGGEvEVRLPLIGRFNVYNALAAIAAALALGIDLEEILA 297
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1088016462 298 TLAKFRGIWRRFEAIGKYRGATVISDYAHHPTAIHSTIRAAREFyPKQRIVLVF 351
Cdd:COG0769 298 ALEKLKGVPGRMERVDGGQGPTVIVDYAHTPDALENVLEALRPH-TKGRLIVVF 350
|
|
| murD |
TIGR01087 |
UDP-N-acetylmuramoylalanine--D-glutamate ligase; [Cell envelope, Biosynthesis and degradation ... |
8-350 |
8.62e-33 |
|
UDP-N-acetylmuramoylalanine--D-glutamate ligase; [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273436 [Multi-domain] Cd Length: 433 Bit Score: 128.61 E-value: 8.62e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 8 KIYFCGIGGIGMSALAQLLNKeGKTVFGSDLvSSTIIKNLKKQNIKVTIQQSGSVLAK-----DTDLLIYSSAVPAHHPE 82
Cdd:TIGR01087 1 KILILGLGKTGRAVARFLHKK-GAEVTVTDL-KPNEELEPSMGQLRLNEGSVLHTGLHledlnNADLVVKSPGIPPDHPL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 83 RQKAKILGIASLSYFEALGQYSQQfeKVIAISGTHGKSTTTAMIASVLIAAKLdPTVIVGSIMKELKSNARAGQKKYLVV 162
Cdd:TIGR01087 79 VQAAAKRGIPVVGDIELFLRLVPL--PVVAITGTNGKTTTTSLLYHLLKAAGL-KAFLGGNIGTPALEVLDQEGAELYVL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 163 EACEHQEHMLQ-LHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDLGCD--CRLVTYGLE 239
Cdd:TIGR01087 156 ELSSFQLETTEsLRPEIALILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKskAQVIWFSVE 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 240 NTAEYtatEVCTLKKQQHFVSLGSEFilNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEAIGKYRGAT 319
Cdd:TIGR01087 236 KDAER---GLCIRDGGLYLKPNDLEG--SLLGLHNAENILAAIALAKSLGLNLEAILEALRSFKGLPHRLEYVGQKNGVH 310
|
330 340 350
....*....|....*....|....*....|.
gi 1088016462 320 VISDYAhhPTAIHSTIrAAREFYPKQRIVLV 350
Cdd:TIGR01087 311 FYNDSK--ATNVHATL-AALSAFDNPVILIV 338
|
|
| murE |
TIGR01085 |
UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, ... |
56-440 |
2.44e-30 |
|
UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase. An exception is Staphylococcus aureus, in which diaminopimelate is replaced by lysine in the peptidoglycan and MurE is EC 6.3.2.7. The Mycobacteria, part of the closest neighboring branch outside of the low-GC Gram-positive bacteria, use diaminopimelate. A close homolog, scoring just below the trusted cutoff, is found (with introns) in Arabidopsis thaliana. Its role is unknown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273435 [Multi-domain] Cd Length: 464 Bit Score: 122.42 E-value: 2.44e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 56 IQQSGSVLA-KDTDLLIYSSAVP-AHHPERQKAkiLGIASLSYFealGQYSQQFeKVIAISGTHGKSTTTAMIASVLIAA 133
Cdd:TIGR01085 37 AIANGAVAVvVERDVDFYVAPVPvIIVPDLRHA--LSSLAAAFY---GHPSKKL-KVIGVTGTNGKTTTTSLIAQLLRLL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 134 KLDPTVI--VG---------------------SIMKELKSNARAGQKkYLVVEACEH---QEHMLQLHPQMIVLTNIEED 187
Cdd:TIGR01085 111 GKKTGLIgtIGyrlggndliknpaalttpealTLQSTLAEMVEAGAQ-YAVMEVSSHalaQGRVRGVRFDAAVFTNLSRD 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 188 HLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDLGCDCRLVTYGLENT-------AEYTATEVCTLKKQQH--F 258
Cdd:TIGR01085 190 HLDFHGTMENYFAAKASLFTELGLKRFAVINLDDEYGAQFVKRLPKDITVSAITqpadgraQDIKITDSGYSFEGQQftF 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 259 VSLGSEFILNIP--GRFNVANAMACIA-ACRVLGIKDSVMQITLAKFRGIWRRFEAIGKYRGATVISDYAHHPTAIHSTI 335
Cdd:TIGR01085 270 ETPAGEGHLHTPliGRFNVYNLLAALAtLLHLGGIDLEDIVAALEKFRGVPGRMELVDGGQKFLVIVDYAHTPDALEKAL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 336 RAAREFyPKQRIVLVF------QPHQRSRTQKLFDKFvncfteADFVIIQEiyDVAGRED-QKIRissQDLVKAIEKKGK 408
Cdd:TIGR01085 350 RTLRKH-KDGRLIVVFgcggdrDRGKRPLMGAIAEQL------ADLVILTS--DNPRGEDpEQII---ADILAGISEKEK 417
|
410 420 430
....*....|....*....|....*....|..
gi 1088016462 409 YAFYTKTVTQTRHKIDEvLDKNDVLLIMGAGD 440
Cdd:TIGR01085 418 VVIIADRRQAIRYAISN-AKAGDVVLIAGKGH 448
|
|
| murE |
PRK00139 |
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional |
86-351 |
5.80e-30 |
|
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional
Pssm-ID: 234660 [Multi-domain] Cd Length: 460 Bit Score: 121.01 E-value: 5.80e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 86 AKILGIASLSYFealgQYSQQFEKVIAISGTHGKSTTTAMIASVLIAA------------KLDPTVIVGS--------IM 145
Cdd:PRK00139 77 RKALALLAAAFY----GHPSDKLKLIGVTGTNGKTTTAYLLAQILRLLgektaligtlgnGIGGELIPSGlttpdaldLQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 146 KELKSNARAGQKkYLVVEACEH---QEHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILikNNDDS 222
Cdd:PRK00139 153 RLLAELVDAGVT-YAAMEVSSHaldQGRVDGLKFDVAVFTNLSRDHLDYHGTMEDYLAAKARLFSELGLAAVI--NADDE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 223 ESRDLGCDCRLVTYGLENtAEYTATEVCTLKKQQHFVsLGSEFILNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKF 302
Cdd:PRK00139 230 VGRRLLALPDAYAVSMAG-ADLRATDVEYTDSGQTFT-LVTEVESPLIGRFNVSNLLAALAALLALGVPLEDALAALAKL 307
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1088016462 303 RGIWRRFEAIGKYRGATVISDYAHHPTAIHSTIRAAREFYpKQRIVLVF 351
Cdd:PRK00139 308 QGVPGRMERVDAGQGPLVIVDYAHTPDALEKVLEALRPHA-KGRLICVF 355
|
|
| MurF |
COG0770 |
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; ... |
98-323 |
3.10e-27 |
|
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440533 [Multi-domain] Cd Length: 451 Bit Score: 113.27 E-value: 3.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 98 EALGQ----YSQQFE-KVIAISGTHGKSTTTAMIASVLiaAKLDPTV--------IVG---SIMkELKSNARagqkkYLV 161
Cdd:COG0770 85 KALQQlaaaHRARFNiPVIAITGSNGKTTTKEMLAAVL--STKGKVLatpgnfnnEIGvplTLL-RLPEDHE-----FAV 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 162 VEA-CEHQEHMLQL----HPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDL--GCDCRLV 234
Cdd:COG0770 157 LEMgMNHPGEIAYLariaRPDIAVITNIGPAHLEGFGSLEGIARAKGEIFEGLPPGGVAVLNADDPLLAALaeRAKARVL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 235 TYGLENTAEYTATEVCTLKKQQHF-VSLGSE---FILNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFE 310
Cdd:COG0770 237 TFGLSEDADVRAEDIELDEDGTRFtLHTPGGeleVTLPLPGRHNVSNALAAAAVALALGLDLEEIAAGLAAFQPVKGRLE 316
|
250
....*....|...
gi 1088016462 311 AIGKYRGATVISD 323
Cdd:COG0770 317 VIEGAGGVTLIDD 329
|
|
| Mur_ligase_M |
pfam08245 |
Mur ligase middle domain; |
113-285 |
7.42e-27 |
|
Mur ligase middle domain;
Pssm-ID: 462409 [Multi-domain] Cd Length: 199 Bit Score: 106.62 E-value: 7.42e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 113 ISGTHGKSTTTAMIASVLIAAKLdPTVIVGSIMKELKSN-------------ARAGQKKYLVVEACEHQEHMLQL----H 175
Cdd:pfam08245 1 VTGTNGKTTTTELIAAILSLAGG-VIGTIGTYIGKSGNTtnnaiglpltlaeMVEAGAEYAVLEVSSHGLGEGRLsgllK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 176 PQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSESRDL-----GCDCRLVTYGLENTAEYTATEV- 249
Cdd:pfam08245 80 PDIAVFTNISPDHLDFHGTMENYAKAKAELFEGLPEDGIAVINADDPYGAFLiaklkKAGVRVITYGIEGEADLRAANIe 159
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1088016462 250 ----CTLKKQQHFVSLGSEFILNIPGRFNVANAMACIAAC 285
Cdd:pfam08245 160 lssdGTSFDLFTVPGGELEIEIPLLGRHNVYNALAAIAAA 199
|
|
| murD |
PRK14106 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional |
1-410 |
1.38e-24 |
|
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Pssm-ID: 184511 [Multi-domain] Cd Length: 450 Bit Score: 105.44 E-value: 1.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 1 MNLvQAKKIYFCGIGGIGMsALAQLLNKEGKTVFGSDLVSSTI----IKNLKKQNIKVTIQQSGSVLAKDTDLLIYSSAV 76
Cdd:PRK14106 1 MEL-KGKKVLVVGAGVSGL-ALAKFLKKLGAKVILTDEKEEDQlkeaLEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 77 PAHHPERQKAKILGIASLSYFEALGQYSQQFekVIAISGTHGKSTTTAMIASVLIAAKlDPTVIVGSIMKELKSNA-RAG 155
Cdd:PRK14106 79 PLDSPPVVQAHKKGIEVIGEVELAYRFSKAP--IVAITGTNGKTTTTTLLGEIFKNAG-RKTLVAGNIGYPLIDAVeEYG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 156 QKKYLVVEACEHQ-EHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMA-FQKYINHLPADgILIKNNDDSESRDLG--CDC 231
Cdd:PRK14106 156 EDDIIVAEVSSFQlETIKEFKPKVGCILNITPDHLDRHKTMENYIKAkARIFENQRPSD-YTVLNYDDPRTRSLAkkAKA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 232 RLVTYGLENTAEytatEVCTLKKQQHFVSLG---SEFI----LNIPGRFNVANAMACIAACRVLGIKDSVMQITLAKFRG 304
Cdd:PRK14106 235 RVIFFSRKSLLE----EGVFVKNGKIVISLGgkeEEVIdideIFIPGEHNLENALAATAAAYLLGISPDVIANTLKTFKG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 305 IWRRFEAIGKYRGATVISDY-AHHPTAihsTIRAAREFypKQRIVLVFQPHQRSRTqklFDKFVNCFTE-ADFVII---- 378
Cdd:PRK14106 311 VEHRIEFVAEINGVKFINDSkGTNPDA---AIKALEAY--ETPIVLIAGGYDKGSD---FDEFAKAFKEkVKKLILlget 382
|
410 420 430
....*....|....*....|....*....|...
gi 1088016462 379 -QEIYDVAGREDQKIRISSQDLVKAIEKKGKYA 410
Cdd:PRK14106 383 aQEIAEAARKYGFDNILFAETLEEAVKKAYEIA 415
|
|
| PRK11929 |
PRK11929 |
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE ... |
86-439 |
2.23e-23 |
|
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF;
Pssm-ID: 237025 [Multi-domain] Cd Length: 958 Bit Score: 103.63 E-value: 2.23e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 86 AKILGIASLSYFealGQYSQQFeKVIAISGTHGKSTTTAMIASVLIA------------AKLDPTVIVGS-------IMK 146
Cdd:PRK11929 94 RKALGELAARWY---GRPSEQL-SLVAVTGTNGKTSCAQLLAQLLTRlgkpcgsigtlgARLDGRLIPGSlttpdaiILH 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 147 ELKSNARAGQKKYLVVEACEH---QEHMLQLHPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDDSE 223
Cdd:PRK11929 170 RILARMRAAGADAVAMEASSHgleQGRLDGLRIAVAGFTNLTRDHLDYHGTMQDYEEAKAALFSKLPGLGAAVINADDPA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 224 S----RDLGCDCRLVTYGLENTAEYTATEV-CTLKKQ--------QHFvslgsEFILNIPGRFNVANAMACIAACRVLGI 290
Cdd:PRK11929 250 AarllAALPRGLKVGYSPQNAGADVQARDLrATAHGQvftlatpdGSY-----QLVTRLLGRFNVSNLLLVAAALKKLGL 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 291 KDSVMQITLAKFRGIWRRFEAIGKY---RGATVISDYAHHPTAIHSTIRAAR--EFYPKQRIVLVF------QPHQRSRT 359
Cdd:PRK11929 325 PLAQIARALAAVSPVPGRMERVGPTagaQGPLVVVDYAHTPDALAKALTALRpvAQARNGRLVCVFgcggdrDKGKRPEM 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 360 QK----LFDKFV----NCFTEADFVIIQEIYDVAGREDQKIRISsqDLVKAIekkgkyafytktvtqtRHKIDEvLDKND 431
Cdd:PRK11929 405 GRiaaeLADRVVvtsdNPRSEAPEAIIDQILAGIPAGARVFVIS--DRAEAI----------------RQAIWM-AAPGD 465
|
....*...
gi 1088016462 432 VLLIMGAG 439
Cdd:PRK11929 466 VILIAGKG 473
|
|
| PRK11929 |
PRK11929 |
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE ... |
99-350 |
1.91e-16 |
|
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF;
Pssm-ID: 237025 [Multi-domain] Cd Length: 958 Bit Score: 82.06 E-value: 1.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 99 ALGQYS-----QQFEKVIAISGTHGKSTTTAMIASVLIAAKLDPTVIV--GSIMKE---------LKSNARAGqkkylVV 162
Cdd:PRK11929 589 ALGRLAtawraRFSLPVVAITGSNGKTTTKEMIAAILAAWQGEDRVLAteGNFNNEigvpltllrLRAQHRAA-----VF 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 163 E-ACEHQEHMLQL----HPQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNNDD---------------- 221
Cdd:PRK11929 664 ElGMNHPGEIAYLaaiaAPTVALVTNAQREHQEFMHSVEAVARAKGEIIAALPEDGVAVVNGDDpytaiwaklagarrvl 743
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 222 ----SESRDLGCDCrLVTYGLENTAEYTATEVCTLKKQqhfvslgSEFILNIPGRFNVANAMACIAACRVLG-----IKD 292
Cdd:PRK11929 744 rfglQPGADVYAEK-IAKDISVGEAGGTRCQVVTPAGS-------AEVYLPLIGEHNLRNALAAIACALAAGaslkqIRA 815
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1088016462 293 SVMQITLAKFRGIWRRFEaigkyRGATVISD-YAHHPTAIHSTIRAAREFyPKQRIVLV 350
Cdd:PRK11929 816 GLERFQPVAGRMQRRRLS-----CGTRIIDDtYNANPDSMRAAIDVLAEL-PNGPRALV 868
|
|
| Mur_ligase_C |
pfam02875 |
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ... |
307-392 |
1.37e-13 |
|
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.
Pssm-ID: 460731 [Multi-domain] Cd Length: 87 Bit Score: 66.21 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 307 RRFEAIGKYRGATVISDYAHHPTAIHSTIRAAREFYPKqRIVLVFQPHQRsRTQKLFDKFVNCFTE-ADFVIIQEIYDVA 385
Cdd:pfam02875 3 GRLEVVGENNGVLVIDDYAHNPDAMEAALRALRNLFPG-RLILVFGGMGD-RDAEFHALLGRLAAAlADVVILTGDYPRA 80
|
....*..
gi 1088016462 386 GREDQKI 392
Cdd:pfam02875 81 EDPGAII 87
|
|
| Mur_ligase |
pfam01225 |
Mur ligase family, catalytic domain; This family contains a number of related ligase enzymes ... |
8-107 |
1.11e-09 |
|
Mur ligase family, catalytic domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.
Pssm-ID: 460121 [Multi-domain] Cd Length: 84 Bit Score: 54.93 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 8 KIYFCGIGGIGMSALAQLLNKEGKTVFGSDlvsstIIKNLKKQNIKVTIQQSGsvlakdtdlliySSAVPAHHPERQKAK 87
Cdd:pfam01225 1 EIHFVGIDGRGMSPGALFLALKGYRVDGSD-----FIESLIALGAAAVVGHDA------------ANNISPDNPELEAAK 63
|
90 100
....*....|....*....|
gi 1088016462 88 ILGIASLSYFEALGQYSQQF 107
Cdd:pfam01225 64 VPGIPVIDRREALAELAAAF 83
|
|
| FolC |
COG0285 |
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ... |
98-351 |
2.31e-08 |
|
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis
Pssm-ID: 440054 [Multi-domain] Cd Length: 423 Bit Score: 55.88 E-value: 2.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 98 EALGQYSQQFeKVIAISGTHGKSTTTAMIASVLIAAKLDptviVG--------------SIMKELKSNARagqkkylVVE 163
Cdd:COG0285 31 ERLGNPQRKL-PVIHVAGTNGKGSTAAMLESILRAAGYR----VGlytsphlvrfneriRINGEPISDEE-------LVE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 164 ACEHQEHMLQ--------------------------------------------LHPQMIVLTNIEEDHLDYY-HNLDHI 198
Cdd:COG0285 99 ALEEVEPAVEevdagpptffevttaaaflyfaeapvdvavlevglggrldatnvIDPLVSVITSIGLDHTDFLgDTLEEI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 199 vmAFQKyinhlpAdGIlIKNN-------DDSESRD------LGCDCRLVTYGLENTAEYTATEVCTLkkqQHFVSLGSEF 265
Cdd:COG0285 179 --AREK------A-GI-IKPGvpvvtgdQQPEALEvieeraAELGAPLYRAGRDFSVEEREGAVFSY---QGPGGEYEDL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 266 ILNIPGRFNVANAMACIAACRVL-----GIKDSVMQITLAKFRgiWR-RFEAIGkyRGATVISDYAHHPTAIHSTIRAAR 339
Cdd:COG0285 246 PLPLLGAHQAENAALALAALEALrelglPISEEAIREGLANAR--WPgRLEVLS--RGPLVILDGAHNPAGARALAETLK 321
|
330
....*....|..
gi 1088016462 340 EFYPKQRIVLVF 351
Cdd:COG0285 322 ELFPFRKLHLVF 333
|
|
| PRK14022 |
PRK14022 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase; |
180-350 |
3.23e-07 |
|
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;
Pssm-ID: 237588 [Multi-domain] Cd Length: 481 Bit Score: 52.35 E-value: 3.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 180 VLTNIEEDHL---------DYYHNlDHIVMAFQKYInhlpadgilIKNNDD---SESRDLGCDCRLVTYGLENTAEYTAT 247
Cdd:PRK14022 204 VFLNITPDHIgpiehptfeDYFYH-KRLLMENSKAV---------VVNSDMdhfSELLEQVTPQEHDFYGIDSENQIMAS 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 248 EVCTLKKQQhfvSLGSEFILNIPGRFNVANAMACIAACRVLG-----IKDSVMQITLAKfrgiwrRFEAIGKYRGATVIS 322
Cdd:PRK14022 274 NAFSFEATG---KLAGTYDIQLIGKFNQENAMAAGLACLRLGasledIQKGIAQTPVPG------RMEVLTQSNGAKVFI 344
|
170 180
....*....|....*....|....*...
gi 1088016462 323 DYAHHPTAIHSTIRAAREFyPKQRIVLV 350
Cdd:PRK14022 345 DYAHNGDSLNKLIDVVEEH-QKGKLILL 371
|
|
| PRK14016 |
PRK14016 |
cyanophycin synthetase; Provisional |
110-302 |
5.11e-07 |
|
cyanophycin synthetase; Provisional
Pssm-ID: 237586 [Multi-domain] Cd Length: 727 Bit Score: 52.08 E-value: 5.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 110 VIAISGTHGKSTTTAMIASVL------------------------------IAAK---LDPTVIV-------GSIMKElk 149
Cdd:PRK14016 482 IVAVTGTNGKTTTTRLIAHILklsgkrvgmtttdgvyidgrlidkgdctgpKSARrvlMNPDVEAavletarGGILRE-- 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 150 snaraGqkkyLVVEACehqehmlqlhpQMIVLTNIEEDHL--DYYHNLDHivMAFQKYI---NHLPaDGILIKNNDDSES 224
Cdd:PRK14016 560 -----G----LAYDRC-----------DVGVVTNIGEDHLglGGINTLED--LAKVKRVvveAVKP-DGYAVLNADDPMV 616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 225 RDLG--CDCRLVTYGLENTAEYTATE------VCTLKKQQHFVSLGS-----EFILNIP----GR--FNVANAMACIAAC 285
Cdd:PRK14016 617 AAMAerCKGKVIFFSMDPDNPVIAEHraqggrAVYVEGDYIVLAEGGweiriISLADIPltlgGKagFNIENALAAIAAA 696
|
250
....*....|....*..
gi 1088016462 286 RVLGIKDSVMQITLAKF 302
Cdd:PRK14016 697 WALGIDIELIRAGLRTF 713
|
|
| PRK11930 |
PRK11930 |
putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine ... |
176-324 |
1.97e-03 |
|
putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional
Pssm-ID: 237026 [Multi-domain] Cd Length: 822 Bit Score: 40.71 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088016462 176 PQMIVLTNIEEDHLDYYHNLDHIVMAFQKYINHLPADGILIKNND-DSESRDLGCDCRLVTYGLENTAeyTATEVCTLKK 254
Cdd:PRK11930 183 PTIGILTNIGGAHQENFRSIKQKIMEKLKLFKDCDVIIYNGDNELiSSCITKSNLTLKLISWSRKDPE--APLYIPFVEK 260
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1088016462 255 QQH-----FVSLGSEFILNIPgrFN----VANAMACIAACRVLGIKDSVMQITLAKFRGIWRRFEAIGKYRGATVISDY 324
Cdd:PRK11930 261 KEDhtvisYTYKGEDFHFEIP--FIddasIENLIHCIAVLLYLGYSADQIQERMARLEPVAMRLEVKEGINNCTLINDS 337
|
|
| |
