NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1308744892|gb|PKM99037|]
View 

DUF3467 domain-containing protein [Elusimicrobia bacterium HGW-Elusimicrobia-3]

Protein Classification

DUF3467 domain-containing protein( domain architecture ID 10571579)

DUF3467 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3467 pfam11950
Protein of unknown function (DUF3467); This family of proteins are functionally ...
 1-87 2.30e-29

Protein of unknown function (DUF3467); This family of proteins are functionally uncharacterized. This protein is found in bacteria, archaea and viruses. Proteins in this family are typically between 101 to 118 amino acids in length.


:

Pssm-ID: 432214  Cd Length: 92  Bit Score: 100.51  E-value: 2.30e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308744892  1 MTDNKEGA--KPMQLEVQMDEATAQGTYANLAGVTHSETEFIFDFLFL-QPNQPKAKLRARIISSPVHTKRFLLALQENI 77
Cdd:pfam11950  1 MEDPEKGApgKIKQLKIELDEEIARGSYANLAIVGHSPEEFRIDFLRLfVPGEPKARVKSRIILSPQHAKRLLAALQQNI 80

                         90
                 ....*....|
gi 1308744892 78 KRYEERFGAI 87
Cdd:pfam11950 81 DKYETRFGEI 90
 
Name Accession Description Interval E-value
DUF3467 pfam11950
Protein of unknown function (DUF3467); This family of proteins are functionally ...
 1-87 2.30e-29

Protein of unknown function (DUF3467); This family of proteins are functionally uncharacterized. This protein is found in bacteria, archaea and viruses. Proteins in this family are typically between 101 to 118 amino acids in length.


Pssm-ID: 432214  Cd Length: 92  Bit Score: 100.51  E-value: 2.30e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308744892  1 MTDNKEGA--KPMQLEVQMDEATAQGTYANLAGVTHSETEFIFDFLFL-QPNQPKAKLRARIISSPVHTKRFLLALQENI 77
Cdd:pfam11950  1 MEDPEKGApgKIKQLKIELDEEIARGSYANLAIVGHSPEEFRIDFLRLfVPGEPKARVKSRIILSPQHAKRLLAALQQNI 80

                         90
                 ....*....|
gi 1308744892 78 KRYEERFGAI 87
Cdd:pfam11950 81 DKYETRFGEI 90
 
Name Accession Description Interval E-value
DUF3467 pfam11950
Protein of unknown function (DUF3467); This family of proteins are functionally ...
 1-87 2.30e-29

Protein of unknown function (DUF3467); This family of proteins are functionally uncharacterized. This protein is found in bacteria, archaea and viruses. Proteins in this family are typically between 101 to 118 amino acids in length.


Pssm-ID: 432214  Cd Length: 92  Bit Score: 100.51  E-value: 2.30e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308744892  1 MTDNKEGA--KPMQLEVQMDEATAQGTYANLAGVTHSETEFIFDFLFL-QPNQPKAKLRARIISSPVHTKRFLLALQENI 77
Cdd:pfam11950  1 MEDPEKGApgKIKQLKIELDEEIARGSYANLAIVGHSPEEFRIDFLRLfVPGEPKARVKSRIILSPQHAKRLLAALQQNI 80

                         90
                 ....*....|
gi 1308744892 78 KRYEERFGAI 87
Cdd:pfam11950 81 DKYETRFGEI 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH