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Conserved domains on  [gi|119372009|sp|Q10N03|]
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RecName: Full=Metallothionein-like protein 1B; AltName: Full=Class I metallothionein-like protein 1B; AltName: Full=OsMT-I-1b

Protein Classification

Metallothio_2 domain-containing protein( domain architecture ID 10477670)

Metallothio_2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Metallothio_2 pfam01439
Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich ...
 11-72 7.95e-09

Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich proteins that bind to heavy metals. Members of this family appear to be closest to Class II metallothioneins, seed pfam00131.


:

Pssm-ID: 396155  Cd Length: 80  Bit Score: 47.01  E-value: 7.95e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119372009  11 CGSNCTCG------KMYPDLEEKSSSAQA-TVVLGVAPEKAHFEA--AAESGETAHGCGCGSSCKCNPCNC 72
Cdd:pfam01439 10 CGSGCKCGsgcggcKMYPDLEESESTTTTeTVVLGVAPEKGHFEGseMAAEGGENGGCKCGSSCTCDPCNC 80
 
Name Accession Description Interval E-value
Metallothio_2 pfam01439
Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich ...
 11-72 7.95e-09

Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich proteins that bind to heavy metals. Members of this family appear to be closest to Class II metallothioneins, seed pfam00131.


Pssm-ID: 396155  Cd Length: 80  Bit Score: 47.01  E-value: 7.95e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119372009  11 CGSNCTCG------KMYPDLEEKSSSAQA-TVVLGVAPEKAHFEA--AAESGETAHGCGCGSSCKCNPCNC 72
Cdd:pfam01439 10 CGSGCKCGsgcggcKMYPDLEESESTTTTeTVVLGVAPEKGHFEGseMAAEGGENGGCKCGSSCTCDPCNC 80
 
Name Accession Description Interval E-value
Metallothio_2 pfam01439
Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich ...
 11-72 7.95e-09

Metallothionein; Members of this family are metallothioneins. These proteins are cysteine rich proteins that bind to heavy metals. Members of this family appear to be closest to Class II metallothioneins, seed pfam00131.


Pssm-ID: 396155  Cd Length: 80  Bit Score: 47.01  E-value: 7.95e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119372009  11 CGSNCTCG------KMYPDLEEKSSSAQA-TVVLGVAPEKAHFEA--AAESGETAHGCGCGSSCKCNPCNC 72
Cdd:pfam01439 10 CGSGCKCGsgcggcKMYPDLEESESTTTTeTVVLGVAPEKGHFEGseMAAEGGENGGCKCGSSCTCDPCNC 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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