|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 506.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNST 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 146330974 321 KPMTYISPLIILSTL*LPLSPMLTLLE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.55e-132 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 381.85 E-value: 1.55e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTiNLELLLMMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNST 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 146330974 321 KPMTYISPLIILSTL*LPLSPMLTLL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
1.29e-120 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 351.43 E-value: 1.29e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNsT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK-P 319
|
330 340
....*....|....*....|....
gi 146330974 321 KPMTYISPLIILSTL*LPLSPMLT 344
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMIL 343
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.06e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 345.37 E-value: 3.06e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNST 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 146330974 321 KPMTYiSPLIILSTL*LPLSPMLTLL 346
Cdd:MTH00070 321 TNNLL-SLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-339 |
8.24e-98 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 293.38 E-value: 8.24e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPS-----TNNMKMKW 315
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQhsislFSWRNSGN 320
|
330 340
....*....|....*....|....
gi 146330974 316 QFNSTKPMTYISPLIILSTL*LPL 339
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLLIPL 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.37e-88 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 269.15 E-value: 2.37e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQfNST 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR-TKS 319
|
330 340
....*....|....*....|....*.
gi 146330974 321 KPMTYISPLIILSTL*LPLSPMLTLL 346
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-335 |
7.88e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 185.09 E-value: 7.88e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 10 ILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVtkp 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS--- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 90 ltpmaSITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINL-ELLLMMAILSIAIGGWG 168
Cdd:MTH00144 87 -----MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 169 GLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTwNKTPLLATTILLIM 248
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 249 LSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNSTKPMTYISP 328
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLLGG 320
|
....*..
gi 146330974 329 LIILSTL 335
Cdd:MTH00144 321 LLFLLLY 327
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.68e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 176.55 E-value: 1.68e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLvy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 sgqwSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQIsptINLELLLMMAIL 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 241 ATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYStslTMFPSTNNMKMKWQFNST 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 146330974 321 KPMTYISPLIILSTL*LPLSPMLTLL 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-341 |
2.30e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.03 E-value: 2.30e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 12 TMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVTKPLT 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKNITALM 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 92 pmasitMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAILSIAIGGWGGLN 171
Cdd:MTH00011 94 ------LLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 172 QTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLLATTILLIMLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 252 GGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLtystsltMFPSTNNMKMKWQFNSTKPMTYISPLII 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-------IFNFMYLSPTFSSLKSAPYEPKTKILIS 320
|
330
....*....|
gi 146330974 332 LSTL*LPLSP 341
Cdd:MTH00011 321 MCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-332 |
5.41e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 140.58 E-value: 5.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 11 LTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVysgqwsvTKPL 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS-------NLYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 91 TPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPtiNLELLLMMAILSIAIGGWGGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 171 NQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHTWNKTPLLATTILLIMLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 251 LGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQFNSTKPMTYISPLI 330
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMMLP 315
|
..
gi 146330974 331 IL 332
Cdd:MTH00197 316 LL 317
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-296 |
4.80e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 133.32 E-value: 4.80e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLV 79
Cdd:COG1007 99 LLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYG 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 80 YSG------------QWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMS----ILY 143
Cdd:COG1007 179 ATGslnlagiaaalaAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 144 QISPTINLELLLM---MAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM-TAIMAYNPAM---TLLNL*VYILLTTT*F 216
Cdd:COG1007 259 EAFPGLAADWQLLlavLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLGvsaALFYLLAYLFMNLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 217 MMLML----NSSTTTLS-LSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLY 291
Cdd:COG1007 339 AVILLlsrkGGEAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
....*
gi 146330974 292 FYMRL 296
Cdd:COG1007 419 YYLRV 423
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
14-296 |
2.40e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 123.99 E-value: 2.40e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 14 ILGTMIVTTSSHWLTVWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIT-------------INLV 79
Cdd:MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 80 YSGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPtiNLELLLMMAI 159
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 160 LSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNP----AMTLLNL*VYILLTTT*FMMLMLNSSTTTL--SLSHT 233
Cdd:MTH00196 161 FSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKNLiiEFSGL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 146330974 234 WNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRL 296
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
6-296 |
9.69e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 121.28 E-value: 9.69e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSGQW 84
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 85 SV----TKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLelLLMMAIL 160
Cdd:MTH00199 179 SIqginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNV--VLICAVL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMG---WMTAIMAYNP-AMTLLNL*VYILLTTT*FMMLMLNSSTTTL--SLSHTW 234
Cdd:MTH00199 257 SIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFSIILSLKLTKGLivEVSGLS 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 146330974 235 NKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRL 296
Cdd:MTH00199 337 RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-296 |
2.83e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 114.27 E-value: 2.83e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAI--------TI 76
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGIsliygftgSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 77 NLV----YSGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTI--- 149
Cdd:TIGR01770 184 NFEdlllFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 150 ----NLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGW----MTAIMAYNPAMTLLNL*VYILLTTT*FMMLML 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiligLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 222 NSSTttlslSHTWNKT-----------PLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNL 290
Cdd:TIGR01770 344 LRSY-----KDEWIEYisdfaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGA 418
|
....*.
gi 146330974 291 YFYMRL 296
Cdd:TIGR01770 419 FYYLRV 424
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-296 |
1.04e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.99 E-value: 1.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSG-- 82
Cdd:PRK05777 105 FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGsl 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 83 ----------QWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQI------- 145
Cdd:PRK05777 185 sfagiakalaDGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvafgg 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 146 SPTINLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM-TAIMAYNPAM---TLLNL*VYILLTTT*FMMLML 221
Cdd:PRK05777 265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEGysaVLFYLLAYLFMTLGAFGVISL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 222 NSS----TTTLS----LSHTwnkTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFY 293
Cdd:PRK05777 345 LRRkggeAESISdfagLSKR---SPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYY 421
|
...
gi 146330974 294 MRL 296
Cdd:PRK05777 422 LRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
3.69e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.17 E-value: 3.69e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 23 SSHWLTVWIGFEMNMLAIIP-ILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVT-----------KPL 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskaltgglnSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 91 TPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILL-TWQKLAP-----MSILYQISPTINLELLLMMAILSIAI 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 165 GGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNSSTTTLSLSHT---------WN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 146330974 236 KTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-296 |
8.73e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.60 E-value: 8.73e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 2 NPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYS 81
Cdd:COG0651 105 RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGAT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 82 GQWS----------VTKPLTPMASITMTLAMAMKLGLSPFHFWVPEV-----TQGTQLSSGL--------ILLTWQKLAP 138
Cdd:COG0651 185 GTLNmadlaarlaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAypaapSPVSALLSGLltkvgvyaILRVLTLLFG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 139 MSILYQISPtinleLLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMT-AIMAYNPAMT---LLNL*VYILLTTT 214
Cdd:COG0651 265 ADPALFLGT-----LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILlGLGLGTPLGLagaLFHLLNHALAKAL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 215 *FM---MLMLNSSTTTLS-LSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNL 290
Cdd:COG0651 340 LFLaagAIERATGTRDLDkLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTL 419
|
....*.
gi 146330974 291 YFYMRL 296
Cdd:COG0651 420 AYFVRI 425
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
6-263 |
2.83e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 79.71 E-value: 2.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMnmLAIIPILMKKY---NPRSMEASTKYFLTQATASMLLMLAITI------ 76
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYGSSLlyglsg 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 77 ---NLVYSGQWSVTKPlTPMASITMTLAMA---MKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLA----PMSILYQIS 146
Cdd:PRK02504 190 gstQLSAIALALITSP-SLGLALALVFVIAgiaFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 147 PTINLE---LLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MTAIMAYNP---AMTLLNL*VYILLTTT*FMML 219
Cdd:PRK02504 269 PSFDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvMIGLVAGTEagyASMVFYLLAYLFMNLGAFACV 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 146330974 220 MLNSSTT----TLSLSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PK 263
Cdd:PRK02504 349 ILFSLRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-267 |
2.00e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.21 E-value: 2.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 9 IILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSM---------EASTKYFLTQATASMLLMLAITINLV 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 80 YSGQ-------WSVTKPLT-------PMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILyqI 145
Cdd:MTH00198 273 FTGNegmlgtiLSATLETTnielrqgSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--T 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 146 SPTINLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYIL--LTTT*FMMLML-- 221
Cdd:MTH00198 351 SLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtyLVSALASFTVIct 430
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 146330974 222 ---------------------NSSTTTLSLSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMII 267
Cdd:MTH00198 431 leefgtrtptsrqrdgsfgnyNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
3.36e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.11 E-value: 3.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPI--LMKKyNPRSMEASTKYFLTQATASMLLMLA----- 73
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLsgYTKK-DVRSNEATMKYLLMGGASSSILVYGfswly 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 74 -----------ITINLVYSGQWSVtkPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQG-----------TQLSSGLILL 131
Cdd:CHL00049 187 glsggeielqeIVNGLINTQMYNS--PGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsptpvvaflsvTSKVAASALA 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 132 TwqklAPMSILYQISPTINLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MTAIMAYNPAMTLLNL*VYIL 210
Cdd:CHL00049 265 T----RIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDGYASMITYML 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 146330974 211 LTTt*FMMLMLNSSTTTLSL----------SHTWNKTPLLATTILLIMLSLGGLPPLSGF*PK 263
Cdd:CHL00049 341 FYI--FMNLGTFACIVLFGLrtgtdnirdyAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-287 |
1.55e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.04 E-value: 1.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 50 PRSMEASTKYFLTQATASmLLMLAITINLVYSGQWSVTkpLTPMASITMT------------LAMAMKLGLSPFHFWVPE 117
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGS-LLMLLAILGLYFLGGGTFD--LLELLNLPLPfgvqtwlflaffIAFAVKVPLFPLHTWLPD 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 118 V-TQGTQLSSGLILLTWQKLAP---MSILYQISPTINLELLLMMAILS-IAI--GGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:TIGR01972 229 AhVEAPTAGSVILAGVLLKMGTygfLRFNLPLFPDASLYFAPVLAALGvIAIiyGALIALAQTDIKRLIAYSSISHMGFV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 191 T-AIMAYNPAMT---LLNL*VYILLTTT*FMML-MLNSSTTTLSLSH---TWNKTPLLATTILLIMLSLGGLPPLSGF*P 262
Cdd:TIGR01972 309 LlGIFSFNELGIsgaVFQMISHGLITAALFLLVgVLYERAHTRDIAKyggLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
250 260
....*....|....*....|....*
gi 146330974 263 KWMIIQEMTKndsiIMPTIMAMAAL 287
Cdd:TIGR01972 389 EFLILLGSFK----VNPVVAFLAAL 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-267 |
2.10e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.72 E-value: 2.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 50 PRSMEASTKYFLTQATASMLLMLAITINLVYSGQWS------VTKPLTPMASIT----MTLAMAMKLGLSPFHFWVPEV- 118
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaelAAAPLPLTAQLLlflaFFIAFAVKVPMFPFHTWLPDAh 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 119 ----TQGTQLSSGLIL----------------LTWQKLAPmsilyqisptinleLLLMMAILSIAIGGWGGLNQTQLRKI 178
Cdd:COG1008 237 veapTAGSVLLAGVLLkmggygllrfalplfpEASAYFAP--------------LLAALGVIGIIYGALVALAQTDLKRL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 179 MAYSSIAHMGWMT-AIMAYNP-AMT--LLNL*VYILLTTT*FMML-MLNSSTTTLSLSHT---WNKTPLLATTILLIMLS 250
Cdd:COG1008 303 IAYSSVSHMGFVLlGIFALNPlGLQgaVLQMVSHGLITAALFLLVgVLYDRTHTRDIADLgglAKRMPVLAALFLLAALA 382
|
250
....*....|....*..
gi 146330974 251 LGGLPPLSGF*PKWMII 267
Cdd:COG1008 383 SLGLPGTSGFVGEFLVL 399
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
3.62e-11 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 57.65 E-value: 3.62e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 146330974 291 YFYMRLTYSTSLTMFPSTNNMKMKWQFNSTKPMTYISPLIILSTL*LPLSP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-298 |
9.46e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 62.59 E-value: 9.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 49 NPRSMEASTKYFLTQATASMLLMLAI--------TINLVYSGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEVTQ 120
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVgllygvtgTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYP 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 121 GTQLSSGLILLTWQKLAPMSILYQISPTI----------NLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 191 TAIMAYN----PAMTLLNL*VYILLTTT*FM---MLMLNSSTTTLS-LSHTWNKTPLLATTILLIMLSLGGLPPLSGF*P 262
Cdd:PRK08375 311 LLGLALLtplaLAAGLLHLLHHALMKGALFLaagAIEVTYGTRRLSeLSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
250 260 270
....*....|....*....|....*....|....*.
gi 146330974 263 KWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTY 298
Cdd:PRK08375 391 KWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
27-337 |
1.40e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 62.27 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 27 LTVWigFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAI--------TINL----VYSGQWSVTKPLTpMA 94
Cdd:PRK12663 133 LYVW--FEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIgllygtfgTLNMahiaMRLNDMGDTATLT-TI 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 95 SITMTLAMAMKLGLSPFhFWVPEV-----TQGTQLSSGLilLT----WQKLAPMSILYQISPTINLELLLMMAILSIAIG 165
Cdd:PRK12663 210 ALLFLLAFGMKAALFPF-MWLPAAyhtpnTEVAALFAAL--LTkvgiYALIRVFTLLFPQERELLHPLLATMAAITMVIG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 166 GWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VY----ILLTTT*FM----MLMLNSSTTTLSLSHTWNKT 237
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYlvhdMVVKTALFLiagsLVRLTGYRSLQYLGGLYRKE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 238 PLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTystsLTMFPSTNNMKMKwQF 317
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF----FLAYWGDKDGEEV-NF 441
|
330 340
....*....|....*....|
gi 146330974 318 NSTKPMTYIsPLIILSTL*L 337
Cdd:PRK12663 442 KPIPLYRKL-PLSILAVVVI 460
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-307 |
4.21e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.78 E-value: 4.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 2 NPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLA--IIPILMKKYNprsMEASTKYFLTQATASMLLMLAITINLV 79
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfMMVPMGKKES---RKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 80 YSGQWSV----------TKPLTPMASITMTLAMAM-KLGLSPFHFWVPEV------TQGTQLSSGLI------------L 130
Cdd:PRK08668 173 KTGTFDFadisqglindTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAyseapqSFSAVLSGQLSklgaygfllvlyV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 131 LTWQKLAPMSILYQISPTINLELLLMMAIlSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-------MTAIMAYNPAMTLL 203
Cdd:PRK08668 253 LPGTKLFSEFGTYRGVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYilvglglGTSLGFAGGLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 204 NL*VYILLTTT*FMMLMLNSSTTTLS----LSHtwnKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMP 279
Cdd:PRK08668 332 NHALFKGLFFLIFAAVIYRTGTTKISemggLIE---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
330 340
....*....|....*....|....*...
gi 146330974 280 TIMAMAALLNLYFYMRLTYSTSLTMFPS 307
Cdd:PRK08668 409 FMAFFGSIGSFLYVFRPLAGVFLGQLPS 436
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-299 |
2.69e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 58.44 E-value: 2.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 47 KYNPRSMEASTKYFLTQATASMLLMLAI--------TINL------VYSGQWSVTKPLTPMASITMTLAMAM-------K 105
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALaflyatfgTLNMadlsakIRGLSFPLTGGLAGNPPLALGVALALalwaftiK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 106 LGLSPFHFWVPEV-----TQGTQLSSGLILLTwQKLAPMSILYQI-------SPTIN--LELLLMMAILSIAIGGWGGLN 171
Cdd:PRK12667 237 AAIFPNHFWLPDAhpaapSPVSAMLSGLVVNV-GAYAIIRFLYTIfgispslIDFRAalSPILIILGAVSAIIGALMMVV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 172 QTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYILLTTT*FMMLMLNS--------STTTLSLSHTWNKTPLLATT 243
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASgvfihaagTRDIDELAGLGRKMPIASFA 395
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 146330974 244 ILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYS 299
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-266 |
2.84e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.10 E-value: 2.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPIL-MKKYNPRSMEASTKYFLTQATASMLLMLAI--------TI 76
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVaFRNDTWEAIEAGIKYMFVGSLASSMVLLGIallygqygTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 77 NLVYSGQwSVTKPLTPMASITMTL---AMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQK---LAPMSILYQI-SPTI 149
Cdd:PRK08376 203 NMAYLAV-KMSENPTVVAKIALALfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQaglYALARVLFSIyGPAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 150 NLE----LLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM-----TAIMAYNPA------MTLLNL*VYILLTTT 214
Cdd:PRK08376 282 NLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPamasygEIALAGGIYHIVNHA 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 146330974 215 *FMMLMLNSSTTTLSLSHTWNKTPL--LA-----TTILLIM--LSLGGLPPLSGF*PKWMI 266
Cdd:PRK08376 362 LYKALLFLTAGAVIYETGTRNLNELggLArtmpkTTIAFLIgaAAIVGLPPFNGFASKWLI 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-300 |
3.63e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.77 E-value: 3.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 49 NPRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVT----KPLTPMASITMTLAMAM-------KLGLSPFHFWVPE 117
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSellaAAPTILSSPLLTLILLLlllgafgKSAQFPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 118 VTQG-----------TQLSSGLILLtwqklAPMSILYQISPTInLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAH 186
Cdd:COG1009 237 AMEGptpvsallhaaTMVKAGVYLL-----ARLSPLFALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 187 MGWMTA---IMAYNPAMTLLnl*vyilLTTT*FM-MLMLNSStttlSLSHT------------WNKTPLLATTILLIMLS 250
Cdd:COG1009 311 LGYMFLalgVGAYVAALFHL-------LTHAFFKaLLFLGAG----SVIHAtgtrdirkmgglRKKMPITAITFLIGALS 379
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 146330974 251 LGGLPPLSGF*PKWMIIQEM--TKNDSIIMPTIMAMAALLNLYFYMRLTYST 300
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAAleAGGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-330 |
2.51e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 49.15 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 100 LAMAMKLGLSPFHFWVPEV-----TQGTQLSSGlILLTWQKLAPMSILYQISPTINLEL---LLMMAILSIAIGGWGGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhveapVAGSVLLAG-ILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 172 QTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNl*VYILLTTT*FMMLMLNSSTTTLSLSHTW---------NKTPLLAT 242
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTG-SIFIMLAHGIVSSLLFILVTILYDRHHTRlikyyrglsITMPIWGT 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 243 TILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSII---MPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKwQFNS 319
Cdd:MTH00226 396 IMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIgvfVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRR-EFYI 474
|
250
....*....|.
gi 146330974 320 TKPMTYISPLI 330
Cdd:MTH00226 475 TASMVFFAFLI 485
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.12e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 48.66 E-value: 3.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 50 PRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVTKPLTPMASITMTLAM------------AMKLGLSPFHFWVPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLPLPPGVqywlflaffiafAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 118 V-----TQGTQLSSGLILltwqKLAP---MSILYQISPTINLELLLMMAILS-IAI--GGWGGLNQTQLRKIMAYSSIAH 186
Cdd:PRK05846 237 AhvqapTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEFAPIIITLGvIAIiyGALVALAQTDIKKLIAYSSISH 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 187 MGWMT-AIMAYNpAMTLLNL*VYI----LLTTT*FMML-MLNSSTTTLSLSH---TWNKTPLLATTILLIMLSLGGLPPL 257
Cdd:PRK05846 313 MGFVTlGIFAGN-QLGIQGAIFQMishgLSSAALFLLVgVLYDRLHTRDIADyggLAKVMPVLAAFFLFFAMASLGLPGT 391
|
250
....*....|
gi 146330974 258 SGF*PKWMII 267
Cdd:PRK05846 392 SGFVGEFLIL 401
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-268 |
4.06e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.43 E-value: 4.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 153 LLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VY----ILLTTT*FMMLML---NSST 225
Cdd:PRK12665 275 LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFLVVGLierQAGS 354
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 146330974 226 TTLS-LSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQ 268
Cdd:PRK12665 355 SSLRrLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-342 |
4.41e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.11 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 154 LLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VYI----LLTTT*FMMLMLNS----ST 225
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTT 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 226 TTLSLSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMf 305
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFES- 440
|
170 180 190
....*....|....*....|....*....|....*..
gi 146330974 306 PSTNNMKMKWQFNSTKPMTYISPLIILSTL*LPLSPM 342
Cdd:PRK12662 441 RMVESKANDKAFKTPNAMVLCIWIMAILSIIVGIYPI 477
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
81-263 |
8.66e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 44.26 E-value: 8.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 81 SGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPE-VTQGTQLSSGLILLTWQK-----LAPMSILYQISPTINLeLL 154
Cdd:PRK12650 197 SDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEaMAAITPVSAFLHAAAVVKagiylLLRFSPVFHDVAVWNW-LL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 155 LMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMA----YNPAMTLLNL*VYILLTTT*FMML-MLNSSTTTLS 229
Cdd:PRK12650 276 IIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGvgtpFALTAAVVHTLAHALFKSSLFMLIgVVDHQAGTRD 355
|
170 180 190
....*....|....*....|....*....|....*..
gi 146330974 230 ---LSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PK 263
Cdd:PRK12650 356 irrLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-296 |
1.29e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.78 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 153 LLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMTLLNL*VY----ILLTTT*FM----MLMLNSS 224
Cdd:PRK07691 277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLligiMIKITGT 356
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 146330974 225 TTTLSLSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRL 296
Cdd:PRK07691 357 TDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
1.79e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.10 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 55 ASTKYFLTQATASMLLMLA----------ITINLVYSGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEV-----T 119
Cdd:PRK12561 138 AATKFILYTALASIFILVAglalalsgdtFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAhgeasA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 146330974 120 QGTQLSSGlILLTWQKLAPMSILYQISPTINLELLLMMAILSIAIGGWGGLN---QTQLRKIMAYSSIAHMG 188
Cdd:PRK12561 218 PVSMILAG-VLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMG 288
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-333 |
2.44e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.76 E-value: 2.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 111 FHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAI-----LSIAIGGWGGLNQTQLRKIMAYSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 186 HMGWMtaIMAYNPAMTLLNL*vYILLTTT*FMMLMLNSSTttlSLSHTWNK-------------TPLLATTILLIMLSLG 252
Cdd:MTH00020 309 QLGYM--VVACGLSHYSISL--FHLMNHAFFKALLFLSAG---SVIHALSDeqdmrkmgglisfLPLTYIFFLIGSLSLM 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 253 GLPPLSGF*PKWMIIQEMTKNDSIIMPT-IMAMAALLNLYFYMRLTYstsLTMFPSTNNMKMKWQFNSTKPMTYISPLII 331
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYwLGCFSALLTAFYSIRLIY---LTFLSNTNLKKAVFFHLHEGDWNLLLPLGI 458
|
..
gi 146330974 332 LS 333
Cdd:MTH00020 459 LA 460
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-300 |
2.51e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.83 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLvYSGQWS 85
Cdd:MTH00207 90 FISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL-NQGHWS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 86 VTK----PLTPMASITMTLAMAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTIN-----LELLLM 156
Cdd:MTH00207 169 ITNmwqtDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSstywfNPALLL 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 157 MAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYN-PAMTLLNL*VYILLTTT*FMML--MLNSSTTTLSLSH- 232
Cdd:MTH00207 249 TASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAgsLIHSHHHSQDLRTm 328
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 146330974 233 --TWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQ-EMTKNDSIIMPTIMAMAALLNLYFYMRLTYST 300
Cdd:MTH00207 329 gnLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILEsSLFYPHNSLMILMIFLATALTAAYSTRFTLAV 399
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-285 |
2.51e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.88 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 6 FTTIILTMILGTMIVTTSSHWLTVWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLaITINLVYSG--- 82
Cdd:PRK06589 118 FLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFL-PAVILIYTKtgn 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 83 ----QWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPEV----TQGTQLSSGLILLTWQKLAPMSILYQISPTINLELL 154
Cdd:PRK06589 197 ldfvSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAmvahYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 155 LMM-------AILSIAIGGWGGLNQTQLRKIMAYSSIAHMGW--MTAIMAYNPAM--TLLNL*VYILLTTT*FM----ML 219
Cdd:PRK06589 277 FAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALgaAILHLVSHSFAKICLFYsmgsIY 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 146330974 220 MLNSSTTTLSLSHTWNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMA 285
Cdd:PRK06589 357 SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLV 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-263 |
7.07e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 41.44 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 110 PFHFWVPEVTQG-TQLSSGLILLTWQKlAPMSILYQISPTIN-----LELLLMMAILSIAIGGWGGLNQTQLRKIMAYSS 183
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGgtplwQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 184 IAHMGWMT---------AIMAynpAMtlLNL*VYILLTTT*FMML-MLNSSTTTLSLSHT---WNKTPLLATTILLIMLS 250
Cdd:PRK12647 292 VSALGTLVmllglgselAIKA---AV--LFLVAHSLYKGALFMVAgIIDHETGTRDITKLgglRRAMPITAAAALLAALS 366
|
170
....*....|...
gi 146330974 251 LGGLPPLSGF*PK 263
Cdd:PRK12647 367 MAGLPPLFGFLAK 379
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
80-268 |
8.32e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.10 E-value: 8.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 80 YSGQWSVTKPLTPMASITMTLAM-----AMKLGLspfHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISP-----TI 149
Cdd:MTH00032 211 YYGGGAYESPLAPFAIIGILLLIgcigkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 150 NLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPAMtllNL*VYILLTTT*FMMLMLNSSTTTLS 229
Cdd:MTH00032 288 TLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSH---NVGLFHLVNHAFFKALLFLSAGSVIH 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 146330974 230 LSHT-----------WNKTPLLATTILLIMLSLGGLPPLSGF*PKWMIIQ 268
Cdd:MTH00032 365 STTVdeqdmrkmgglIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-317 |
8.96e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 8.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 104 MKLGLSPFHFWVPEVTQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLMMAILSIaiggWGGLNQTQLRKIMAYSS 183
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICF----FQMFLLKSYKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 184 IAHMGWMTAIMAYNpamtlLNL*VYILLTTT*FMMLMLNSstttlslshtWNKTPLLATTILLIMLSLGGLPPLSGF*PK 263
Cdd:MTH00091 145 TESFNWLILSFFFS-----FFNVFFLFFYYFLLMLFLIPK----------FNNVNKLNFVSWETLLVFMNLPFSVTFFVK 209
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 146330974 264 WMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQF 317
Cdd:MTH00091 210 IFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-192 |
1.33e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 40.49 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 1 MNPAIFTTIILTMILGTMIVTTSSHWLTVWIGFEMNML-AIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAI----- 74
Cdd:MTH00014 87 KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIpTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSIllify 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 75 ---TINLVYSGQWSVTKPLTPMASITMTLAMAMKLGLSPFHFWVPE------VTQGTQLSSGLILLTWQKLAPMSILYQI 145
Cdd:MTH00014 167 tnnSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKahveapVAGSMILAGILLKLGGYGLLRMSSLFMH 246
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 146330974 146 SPTINLELLLMMAILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTA 192
Cdd:MTH00014 247 INKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTA 293
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
30-190 |
1.87e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.12 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 30 WIGFEMNML---AIIPILMKKYNprsMEASTKYFLTQATASMLLMLAITINLVYSGQ--------WSVTKPLTPMASITM 98
Cdd:PRK08676 128 WIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAMIFAFIGLIFLFSLTRQalgtgtlnWTELAAHASLLSPSV 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 99 TLA--------MAMKLGLSPFHFWVPE-----------VTQGTQLSSGL--ILLTWQKLAPMSILYQISPtinleLLLMM 157
Cdd:PRK08676 205 LGAsflfifigFLAKSGLVPFHTWLPAayakapsvvsaLLSGTVLNIGIygILRLSALLRQSGAAEQFSN-----VLIGL 279
|
170 180 190
....*....|....*....|....*....|...
gi 146330974 158 AILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:PRK08676 280 GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
33-302 |
4.08e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 38.86 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 33 FEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAITINLVYSGQWSVT-----------KPLTPMASITMTLA 101
Cdd:PRK06277 129 FEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITdihnallvnptSPVIYGGLLLLIFG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 102 MAMKLGLSPFHFWVPEVTQGTQLSSGLILLTWQK-------LAPMSILYQISPTINLELLLM-MAILSIAIGGWGGLNQT 173
Cdd:PRK06277 209 LLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKfvlvalmLVIFKLFGGLSYFPSAQGVLIaLSVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 174 QLRKIMAYSSIAHMGWMTAIMAYNPAMT----LLNL*VYILLTTT*FM----MLMLNSSTTTLSLSHTWNKTPLLATTIL 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 146330974 246 LIMLSLGGLPPLSGF*PKWMIIQEMTKNDSIIMPTIMAMAALLNLYFYMRLTYSTSL 302
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
14-270 |
4.83e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 38.62 E-value: 4.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 14 ILGTMIVTTSSHWLTVWIGFEMNMLA---IIPILMKKYNPRSMeastkyFLTQATASMLLMLAITINLVY-SGQWSVTKP 89
Cdd:PRK06459 82 ILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 90 LTPMASITMTLAMAMKLGLSPFHF--WVPEV------TQGTQLSSGLILLTWQKLAPMSILYQISPTINLELLLM-MAIL 160
Cdd:PRK06459 156 PSPVPLILASFGFIIKMGMMPFLVseWLPIAhgnapsNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILaIGAF 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTA-----IMAYNPAMTLLNL*VYILLT---------TT*FMMLMLNSSTT 226
Cdd:PRK06459 236 SILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQS 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 146330974 227 TLSLSHTWNKTPLLATTILLImlSLGGLPPLSGF*PKWMIIQEM 270
Cdd:PRK06459 316 ITYSKKIRNRWIELGLTLLAS--SLSGLLPNIGGVASWLLLESL 357
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-191 |
8.89e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 37.72 E-value: 8.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146330974 100 LAMAMKLGLSPFHFWVPEV-----TQGTQLSSGLIL---------LTWQKLAPMSILYqiSPtinleLLLMMAILSIAIG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLLklggygfirFSWPLLPEASEYF--SP-----LIQTLSLLAIIYG 286
|
90 100
....*....|....*....|....*.
gi 146330974 166 GWGGLNQTQLRKIMAYSSIAHMGWMT 191
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
|
| |
