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Conserved domains on  [gi|109821809|sp|Q5W111|]
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RecName: Full=SPRY domain-containing protein 7; AltName: Full=Chronic lymphocytic leukemia deletion region gene 6 protein; Short=CLL deletion region gene 6 protein

Protein Classification

SPRY domain-containing protein 7( domain architecture ID 10191381)

SPRY domain-containing protein 7 (SPRYD7) is a novel protein associated with colorectal cancer progression and metastasis

CATH:  2.60.120.920
Gene Ontology:  GO:0005515
SCOP:  4001665

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SPRYD7 cd12880
SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also ...
35-196 1.80e-110

SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also known as SPRY domain-containing protein 7 or CLL deletion region gene 6 protein homolog or CLLD6 or chronic lymphocytic leukemia deletion region gene 6 protein homolog). In humans, CLLD6 is highly expressed in heart, skeletal muscle, and testis as well as cancer cell lines. It also has cross-species conservation, suggesting that it is likely to carry out important cellular processes.


:

Pssm-ID: 293938  Cd Length: 160  Bit Score: 312.21  E-value: 1.80e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  35 MGTDVVIVKNGRRICGTGGCLASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEE 114
Cdd:cd12880    1 MGPDVVIVKNGRRICGTGAALANAPIVQDKAYFEVKIQSTGVWGVGLATRKTDLNRVPLGNDAESWVLRSDGTIWHNGEV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809 115 KNRLpaNSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYHTPPPGFEKILFEQQ 194
Cdd:cd12880   81 IHKL--KQLVEEGDVIGVTYDHVELNFYLNGKPLDCPITGIKGTVYPVVYVDDGAILDVQFSNFYHPPPSGFEEIMFEQS 158

                 ..
gi 109821809 195 IF 196
Cdd:cd12880  159 LL 160
 
Name Accession Description Interval E-value
SPRYD7 cd12880
SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also ...
35-196 1.80e-110

SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also known as SPRY domain-containing protein 7 or CLL deletion region gene 6 protein homolog or CLLD6 or chronic lymphocytic leukemia deletion region gene 6 protein homolog). In humans, CLLD6 is highly expressed in heart, skeletal muscle, and testis as well as cancer cell lines. It also has cross-species conservation, suggesting that it is likely to carry out important cellular processes.


Pssm-ID: 293938  Cd Length: 160  Bit Score: 312.21  E-value: 1.80e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  35 MGTDVVIVKNGRRICGTGGCLASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEE 114
Cdd:cd12880    1 MGPDVVIVKNGRRICGTGAALANAPIVQDKAYFEVKIQSTGVWGVGLATRKTDLNRVPLGNDAESWVLRSDGTIWHNGEV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809 115 KNRLpaNSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYHTPPPGFEKILFEQQ 194
Cdd:cd12880   81 IHKL--KQLVEEGDVIGVTYDHVELNFYLNGKPLDCPITGIKGTVYPVVYVDDGAILDVQFSNFYHPPPSGFEEIMFEQS 158

                 ..
gi 109821809 195 IF 196
Cdd:cd12880  159 LL 160
SPRY smart00449
Domain in SPla and the RYanodine Receptor; Domain of unknown function. Distant homologues are ...
62-171 8.81e-22

Domain in SPla and the RYanodine Receptor; Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.


Pssm-ID: 214669  Cd Length: 122  Bit Score: 85.81  E-value: 8.81e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809    62 QNKSYFEFKIQSTGIWGIGVATQKVNL-NQIPLGRDMHSLVMR-NDGALYHNNEekNRLPANSLPQEGDVVGITYDHV-- 137
Cdd:smart00449   1 SGRHYFEVEIGDGGHWRVGVATKSVPRgYFALLGEDKGSWGYDgDGGKKYHNST--GPEYGLPLQEPGDVIGCFLDLEag 78
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 109821809   138 ELNVYLNGKN---MHCPASGIRGTVYPVVYVDDSAIL 171
Cdd:smart00449  79 TISFYKNGKYlhgLAFFDVKFSGPLYPAFSLGSGNSV 115
SPRY pfam00622
SPRY domain; SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many ...
64-165 2.83e-08

SPRY domain; SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many eukaryotic proteins with a wide range of functions. It is a protein-interaction module involved in many important signalling pathways like RNA processing, regulation of histone H3 methylation, innate immunity or embryonic development. It can be divided into 11 subfamilies based on amino acid sequence similarity or the presence of additional protein domains. The greater SPRY family is divided into the SPRY/B30.2 (which contains a PRY extension at the N-terminal) and SPRY-only sub-families which are preceded by a subdomain that is structurally similar to the PRY region. SPRY/B30.2 structures revealed a bent beta-sandwich fold comprised of two beta-sheets. Distant homologs are domains in butyrophilin/ marenostrin/pyrin.


Pssm-ID: 459877  Cd Length: 121  Bit Score: 50.03  E-value: 2.83e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809   64 KSYFEFKI--QSTGIWGIGVATQKVNL-NQIPLGRDMHSLVMRND-GALYHNNEEKNRLPANSlpQEGDVVGITYDHV-- 137
Cdd:pfam00622   1 RHYFEVEIfgQDGGGWRVGWATKSVPRkGERFLGDESGSWGYDGWtGKKYWASTSPLTGLPLF--EPGDVIGCFLDYEag 78
                          90       100       110
                  ....*....|....*....|....*....|
gi 109821809  138 ELNVYLNGKNMHCPASGIR--GTVYPVVYV 165
Cdd:pfam00622  79 TISFTKNGKSLGYAFRDVPfaGPLFPAVSL 108
 
Name Accession Description Interval E-value
SPRYD7 cd12880
SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also ...
35-196 1.80e-110

SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also known as SPRY domain-containing protein 7 or CLL deletion region gene 6 protein homolog or CLLD6 or chronic lymphocytic leukemia deletion region gene 6 protein homolog). In humans, CLLD6 is highly expressed in heart, skeletal muscle, and testis as well as cancer cell lines. It also has cross-species conservation, suggesting that it is likely to carry out important cellular processes.


Pssm-ID: 293938  Cd Length: 160  Bit Score: 312.21  E-value: 1.80e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  35 MGTDVVIVKNGRRICGTGGCLASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEE 114
Cdd:cd12880    1 MGPDVVIVKNGRRICGTGAALANAPIVQDKAYFEVKIQSTGVWGVGLATRKTDLNRVPLGNDAESWVLRSDGTIWHNGEV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809 115 KNRLpaNSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYHTPPPGFEKILFEQQ 194
Cdd:cd12880   81 IHKL--KQLVEEGDVIGVTYDHVELNFYLNGKPLDCPITGIKGTVYPVVYVDDGAILDVQFSNFYHPPPSGFEEIMFEQS 158

                 ..
gi 109821809 195 IF 196
Cdd:cd12880  159 LL 160
SPRY smart00449
Domain in SPla and the RYanodine Receptor; Domain of unknown function. Distant homologues are ...
62-171 8.81e-22

Domain in SPla and the RYanodine Receptor; Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.


Pssm-ID: 214669  Cd Length: 122  Bit Score: 85.81  E-value: 8.81e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809    62 QNKSYFEFKIQSTGIWGIGVATQKVNL-NQIPLGRDMHSLVMR-NDGALYHNNEekNRLPANSLPQEGDVVGITYDHV-- 137
Cdd:smart00449   1 SGRHYFEVEIGDGGHWRVGVATKSVPRgYFALLGEDKGSWGYDgDGGKKYHNST--GPEYGLPLQEPGDVIGCFLDLEag 78
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 109821809   138 ELNVYLNGKN---MHCPASGIRGTVYPVVYVDDSAIL 171
Cdd:smart00449  79 TISFYKNGKYlhgLAFFDVKFSGPLYPAFSLGSGNSV 115
SPRY cd11709
SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit ...
64-174 1.50e-13

SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit Ryanodine receptor (hence the name), are homologous to B30.2. SPRY domains have been identified in at least 11 protein families, covering a wide range of functions, including regulation of cytokine signaling (SOCS), RNA metabolism (DDX1 and hnRNP), immunity to retroviruses (TRIM5alpha), intracellular calcium release (ryanodine receptors or RyR) and regulatory and developmental processes (HERC1 and Ash2L). B30.2 also contains residues in the N-terminus that form a distinct PRY domain structure; i.e. B30.2 domain consists of PRY and SPRY subdomains. B30.2 domains comprise the C-terminus of three protein families: BTNs (receptor glycoproteins of immunoglobulin superfamily); several TRIM proteins (composed of RING/B-box/coiled-coil or RBCC core); Stonutoxin (secreted poisonous protein of the stonefish Synanceia horrida). TRIM/RBCC proteins are involved in a variety of processes, including apoptosis, cell cycle regulation, cell growth, senescence, viral response, meiosis, cell differentiation, and vesicular transport. Genes belonging to this family are implicated in several human diseases that vary from cancer to rare genetic syndromes. The PRY-SPRY domain in these TRIM families is suggested to serve as the target binding site. While SPRY domains are evolutionarily ancient, B30.2 domains are a more recent adaptation where the SPRY/PRY combination is a possible component of immune defense. Mutations found in the SPRY-containing proteins have shown to cause Mediterranean fever and Opitz syndrome.


Pssm-ID: 293931  Cd Length: 118  Bit Score: 63.99  E-value: 1.50e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  64 KSYFEFKIQST--GIWGIGVATQKVNLN-QIPLGRDMHSLVMrnDGALYHNNEEKNRLPANSLPQEGDVVGITYD--HVE 138
Cdd:cd11709    2 KWYWEVRVDSGngGLIQVGWATKSFSLDgEGGVGDDEESWGY--DGSRLRKGHGGSSGPGGRPWKSGDVVGCLLDldEGT 79
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 109821809 139 LNVYLNGKNMHCPASGI---RGTVYPVVYVDDSAILDCQ 174
Cdd:cd11709   80 LSFSLNGKDLGVAFTNLflkGGGLYPAVSLGSGQGVTIN 118
SPRY_SOCS3 cd12876
SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family; The SPRY ...
31-163 4.13e-09

SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family; The SPRY domain-containing SOCS box protein family (SPSB1-4, also known as SSB-1 to -4) is composed of a central SPRY protein interaction domain and a C-terminal SOCS box. All four SPSB proteins interact with c-Met, the hepatocyte growth factor receptor, but SOCS3 regulates cellular response to a variety of cytokines such as leukemia inhibitory factor (LIF) and interleukin 6. SOCS3, along with SOCS1, are expressed by immune cells and cells of the central nervous system (CNS) and have the potential to impact immune processes within the CNS. In non-small cell lung cancer (NSCLC), SOCS3 is silenced and proline-rich tyrosine kinase 2 (Pyk2) is over-expressed; it has been suggested that SOCS3 could be an effective way to prevent the progression of NSCLC due to its role in regulating Pyk2 expression.


Pssm-ID: 293936  Cd Length: 185  Bit Score: 53.70  E-value: 4.13e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  31 DTQHMGTDVVIVKNGRRI-------CGTGGCLASAPLHQNKSYFEFKIqSTGIWG----IGVATQKVNLNQI------PL 93
Cdd:cd12876    5 DERDKSPAVQLSDNNREVyfhpdysCGTAAVRGTKPLTNGQHYWEIKM-SSPVYGtdmmVGVGTKKADLHAYryefcsLL 83
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109821809  94 GRDMHSLVMRNDGALYHNNEEKNRlpANSLPQEGDVVGITYD--HVELNVYLNGKNMHCPASGIRG--TVYPVV 163
Cdd:cd12876   84 GEDEESWGLSYKGLLWHDGQSRPY--TSPFGNQGTIIGVHLDmwRGTLTFYKNGKPLGVAFTGLNGvkPLYPMV 155
SPRY pfam00622
SPRY domain; SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many ...
64-165 2.83e-08

SPRY domain; SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many eukaryotic proteins with a wide range of functions. It is a protein-interaction module involved in many important signalling pathways like RNA processing, regulation of histone H3 methylation, innate immunity or embryonic development. It can be divided into 11 subfamilies based on amino acid sequence similarity or the presence of additional protein domains. The greater SPRY family is divided into the SPRY/B30.2 (which contains a PRY extension at the N-terminal) and SPRY-only sub-families which are preceded by a subdomain that is structurally similar to the PRY region. SPRY/B30.2 structures revealed a bent beta-sandwich fold comprised of two beta-sheets. Distant homologs are domains in butyrophilin/ marenostrin/pyrin.


Pssm-ID: 459877  Cd Length: 121  Bit Score: 50.03  E-value: 2.83e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809   64 KSYFEFKI--QSTGIWGIGVATQKVNL-NQIPLGRDMHSLVMRND-GALYHNNEEKNRLPANSlpQEGDVVGITYDHV-- 137
Cdd:pfam00622   1 RHYFEVEIfgQDGGGWRVGWATKSVPRkGERFLGDESGSWGYDGWtGKKYWASTSPLTGLPLF--EPGDVIGCFLDYEag 78
                          90       100       110
                  ....*....|....*....|....*....|
gi 109821809  138 ELNVYLNGKNMHCPASGIR--GTVYPVVYV 165
Cdd:pfam00622  79 TISFTKNGKSLGYAFRDVPfaGPLFPAVSL 108
SPRY_Ash2 cd12872
SPRY domain in Ash2; This SPRY domain is found at the C-terminus of Ash2 (absent, small, or ...
39-163 7.65e-07

SPRY domain in Ash2; This SPRY domain is found at the C-terminus of Ash2 (absent, small, or homeotic discs 2) -like proteins, core components of all mixed-lineage leukemia (MLL) family histone methyltransferases. Ash2 is a member of the trithorax group of transcriptional regulators of the Hox genes. Recent studies show that the SPRY domain of Ash2 mediates the interaction with RbBP5 and has an important role in regulating the methyltransferase activity of MLL complexes. In yeast, Ash2 is involved in histone methylation and is required for the earliest stages of embryogenesis.


Pssm-ID: 293932  Cd Length: 150  Bit Score: 46.74  E-value: 7.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  39 VVIVKNGRRICGTGG---CLASAPLHQNKSYFEFKI-----QSTGIWGIGVATQKVNLnQIPLGRDMHSLVMR-NDGALY 109
Cdd:cd12872    1 LKLSEDRLTVTGEKGyrmARANHGVREGKWYFEVKIlegggTETGHVRVGWSRREASL-QAPVGYDKYSYAIRdKDGSKF 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 109821809 110 HNNeeKNRLPANSLPQEGDVVG--ITYDHVElnVYLNGKNMHCPASGIRGTV--YPVV 163
Cdd:cd12872   80 HQS--RGKPYGEPGFKEGDVIGflITLPKIE--FFKNGKSQGVAFEDIYGTGgyYPAV 133
SPRY_NHR_like cd12887
SPRY domain in neuralized homology repeat; This family contains the neuralized homology repeat ...
36-163 9.37e-06

SPRY domain in neuralized homology repeat; This family contains the neuralized homology repeat 1 (NHR1) domain similar to the SPRY domain (known to mediate specific protein-protein interactions) at the C-terminus of a conserved region within eukaryotic neuralized and neuralized-like proteins. In Drosophila, the neuralized protein (Neur) belongs to a group of ubiquitin ligases and is required in a subset of Notch pathway-mediated cell fate decisions during development of the nervous system. Neur binds to the Notch receptor ligand Delta through its first NHR1 domain and mediates its ubiquitination for endocytosis. Multiple copies of this region are found in some members of the family.


Pssm-ID: 293945  Cd Length: 161  Bit Score: 44.04  E-value: 9.37e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  36 GTDVVIVKNGRRICGT------GGCLASAPLHQNkSYFEFKIQSTGI-W----GIGVATQKVNLNQIP---LGRDMHSLV 101
Cdd:cd12887    7 GKNIRLSNDGRTATRVkasfnnGVVFSSRPLRPG-ELFEVRIDKLVDrWsgslEIGVTTLNPETLDLPpsaTDLKSGTWI 85
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109821809 102 MRNDGALYHNNEEKNRLPAN-SLPQEGDVVGITYDHV-ELNVYLNGKNMHCPASGIRGTVYPVV 163
Cdd:cd12887   86 LSGSSVFKNGNKIRENYGPDlDRLRVGDRVGVMRTSDgTLHFYVNGEDQGVAASNVPQPVYAVV 149
SPRY_HERC1 cd12881
SPRY domain in HERC1; This SPRY domain is found in the HERC1, a large protein related to ...
79-169 7.28e-03

SPRY domain in HERC1; This SPRY domain is found in the HERC1, a large protein related to chromosome condensation regulator RCC1. It is widely expressed in many tissues, playing an important role in intracellular membrane trafficking in the cytoplasm as well as Golgi apparatus. HERC1 also interacts with tuberous sclerosis 2 (TSC2, tuberin), which suppresses cell growth, and results in the destabilization of TSC2. However, the biological function of HERC1 has yet to be defined.


Pssm-ID: 293939  Cd Length: 162  Bit Score: 35.79  E-value: 7.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109821809  79 IGVATQKVNLNQIplgRDMHSLVMRN--DGALYHNNEEKNRLpaNSLPQEGDVVGITYDHVE--LNVYLNGKNMHCPASG 154
Cdd:cd12881   62 VGVSRKPVTDFNY---RTSSDMWLYRayNGNLYHNGEQLLRL--SSKFHQGDYITVVLDMEEgtLSFGKNGEEPGVAFED 136
                         90
                 ....*....|....*.
gi 109821809 155 IRGT-VYPVVYVDDSA 169
Cdd:cd12881  137 VDATeLYPCVMFYSSG 152
SPRY_RanBP9_10 cd12909
SPRY domain in Ran binding proteins 9 and 10; This family includes SPRY domain in Ran binding ...
66-99 7.45e-03

SPRY domain in Ran binding proteins 9 and 10; This family includes SPRY domain in Ran binding protein (RBP or RanBPM) 9 and 10, and similar proteins. RanBP9 (also known as RanBPM), a binding partner of Ran, is a small Ras-like GTPase that exerts multiple functions via interactions with various proteins. RanBP9 and RanBP10 also act as androgen receptor (AR) coactivators. Both consist of the N-terminal proline- and glutamine-rich regions, the SPRY domain, and LisH-CTLH and CRA motifs. SPRY domain of RanBPM forms a complex with CD39, a prototypic member of the NTPDase family, thus down-regulating activity substantially. RanBP10 enhances the transcriptional activity of AR in a ligand-dependent manner and exhibits a protein expression pattern different from RanBPM in various cell lines. RanBP10 is highly expressed in AR-positive prostate cancer LNCaP cells, while RanBPM is abundant in WI-38 and MCF-7 cells.


Pssm-ID: 293966  Cd Length: 144  Bit Score: 35.19  E-value: 7.45e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 109821809  66 YFEFKIQSTG----IwGIGVATQKVNLNQIPlGRDMHS 99
Cdd:cd12909   28 YFEVKIISKGrdgyI-GIGFSTKDVNLNRLP-GWEPHS 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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