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Conserved domains on  [gi|1624818119|gb|QCF58638|]
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virion protein G11 [human gammaherpesvirus 4]

Protein Classification

PHA03365 family protein( domain architecture ID 10010542)

PHA03365 family protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PHA03365 PHA03365
hypothetical protein; Provisional
4-421 0e+00

hypothetical protein; Provisional


:

Pssm-ID: 177602  Cd Length: 419  Bit Score: 705.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119   4 AYPGGAHAALASRRSSFRNSLRRLRPTEKPDTSFMRGVWKYEIFPSYVRVTNKQVLQLDAQCQELPPCPSVGQILSFKLP 83
Cdd:PHA03365    1 AYPGSAHAALASRPKSFRGSFRRLRPSEHPETKFQRGVWKFSIHDSYIKITNKQVLQLTADCQCLPPCPSVGQILKKQIP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119  84 SFSFNTTTYGSRYFTVAFLFFGAEDNEVFLKPFFVMHSDQDIVLSVLNPRSLFIEKGKFTWYIVPIRLVKNPYLYLQILP 163
Cdd:PHA03365   81 NFSFNSTTYGSRGTTTAFYAFGDEDNPVKIKPMFVESSDQEIILRLLNPLELMIPAGSLKFYILPITLVKLDGLYLRCLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 164 GQSDIQLTRSCTQSGDKLNTSEPQIFLSGSPVTSQDECLPYLLAQHTPPFLKSYARIHTFPGKVCPVNAIRRGKGYVRVS 243
Cdd:PHA03365  161 DRSPIIMTTSCSQEGTRLNTEEPQVFLSGSPVSSQDEPLPFLLAQKTKPFLKKFARVHTVQGEVCPVNAVRLGKNYVRVS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 244 VDTPDLKREGPLNVKVGMTLLDDVIIAFRYNPYPKSHWRWDGESTDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITA 323
Cdd:PHA03365  241 VDKPSEKLDRPLPVKVGLTLTNDAIIAFRYNPYPKSPWRWDGASTPIVYFGPPVIIPPNCSTVVEYNNTYYSPLSLKITA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 324 VVVSHSSNPVFYVYPQEWKPGQTLKLTVRNISNNPITIVTGQSMAQAFFIYAGDPSISTIM-RRYIQRQGCALTLPGNIV 402
Cdd:PHA03365  321 IIVNHETNPDFYIYDCEWKPGQTAKLMVTNTSNFPITISTGTHLGQAIFILAPKFGLSTILsRRYLQRLSTALTLPGGVT 400
                         410
                  ....*....|....*....
gi 1624818119 403 VESSSLPTFERINKTFNGN 421
Cdd:PHA03365  401 VNSSKLPKFERLNKSKNGN 419
 
Name Accession Description Interval E-value
PHA03365 PHA03365
hypothetical protein; Provisional
4-421 0e+00

hypothetical protein; Provisional


Pssm-ID: 177602  Cd Length: 419  Bit Score: 705.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119   4 AYPGGAHAALASRRSSFRNSLRRLRPTEKPDTSFMRGVWKYEIFPSYVRVTNKQVLQLDAQCQELPPCPSVGQILSFKLP 83
Cdd:PHA03365    1 AYPGSAHAALASRPKSFRGSFRRLRPSEHPETKFQRGVWKFSIHDSYIKITNKQVLQLTADCQCLPPCPSVGQILKKQIP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119  84 SFSFNTTTYGSRYFTVAFLFFGAEDNEVFLKPFFVMHSDQDIVLSVLNPRSLFIEKGKFTWYIVPIRLVKNPYLYLQILP 163
Cdd:PHA03365   81 NFSFNSTTYGSRGTTTAFYAFGDEDNPVKIKPMFVESSDQEIILRLLNPLELMIPAGSLKFYILPITLVKLDGLYLRCLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 164 GQSDIQLTRSCTQSGDKLNTSEPQIFLSGSPVTSQDECLPYLLAQHTPPFLKSYARIHTFPGKVCPVNAIRRGKGYVRVS 243
Cdd:PHA03365  161 DRSPIIMTTSCSQEGTRLNTEEPQVFLSGSPVSSQDEPLPFLLAQKTKPFLKKFARVHTVQGEVCPVNAVRLGKNYVRVS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 244 VDTPDLKREGPLNVKVGMTLLDDVIIAFRYNPYPKSHWRWDGESTDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITA 323
Cdd:PHA03365  241 VDKPSEKLDRPLPVKVGLTLTNDAIIAFRYNPYPKSPWRWDGASTPIVYFGPPVIIPPNCSTVVEYNNTYYSPLSLKITA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 324 VVVSHSSNPVFYVYPQEWKPGQTLKLTVRNISNNPITIVTGQSMAQAFFIYAGDPSISTIM-RRYIQRQGCALTLPGNIV 402
Cdd:PHA03365  321 IIVNHETNPDFYIYDCEWKPGQTAKLMVTNTSNFPITISTGTHLGQAIFILAPKFGLSTILsRRYLQRLSTALTLPGGVT 400
                         410
                  ....*....|....*....
gi 1624818119 403 VESSSLPTFERINKTFNGN 421
Cdd:PHA03365  401 VNSSKLPKFERLNKSKNGN 419
Herpes_ORF11 pfam04797
Herpesvirus dUTPase protein; This family of proteins are found in Herpesvirus proteins. This ...
37-398 1.92e-158

Herpesvirus dUTPase protein; This family of proteins are found in Herpesvirus proteins. This family includes proteins called ORF10 and ORF11 amongst others. However, these proteins seem to be related to other dUTPases pfam00692 suggesting that these proteins are also dUTPases (Bateman A pers. obs.).


Pssm-ID: 309783  Cd Length: 372  Bit Score: 451.83  E-value: 1.92e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119  37 FMRGVWKYEIFPSYVRVTNKQVLQLDAQCQE-LPPCPSVGQILSFKLPSFSFNTTTYGSR-YFTVAFLFFGAEDNEVFLK 114
Cdd:pfam04797   1 FILGVWSVEIYPTYITVSNKVPLPLPEQDSCtLPFCPSLAEILARKLPSFGFVNSLWGLPtVFSTAFLLFGAPNNRVKVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 115 PFFVMHSDQDIVLSVLNPRSLFIEKGKFTWYIVPIRLVKNPYLYLQILPGQSDIQLTRSCTQSGDKLNTSEPQIFLSGSP 194
Cdd:pfam04797  81 PTVVSDSSEPIIISLRSPLRQMLPPGALKLYILPITLLKLDGLYLRVLKDGSTPVGAPSCLQSGSALATEGPQVFLTGTA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 195 VTSQDEC-LPYLLAQHTPPFLK-SYARIHTFPGKVCPVNAIRRGKGYVRVSVDTPDLKREGPLN----VKVGMTLLDDVI 268
Cdd:pfam04797 161 VSSSDETyTPYFLAQKTPPFLKcGYVRVHAERLEVCRVNSIRLGKNYVRLTVTNTHDTASAKVHfrfqVRVGESLTNCAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 269 IAFRYNPYPKSHWRWDGESTDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITAVVVS-HSSNPVFYVYPQEWKPGQTL 347
Cdd:pfam04797 241 LAFSYNPYPITPWLWAAATVPILYPGPPVVVPPKETTRVEYNNTYEVGTPNATTAVIISgLASNTDFVLRPCEWKPGKTA 320
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1624818119 348 KLTVRNISNNPITIVTGQSMAQAFFIYA-GDPSISTIMRRYIQRQGCALTLP 398
Cdd:pfam04797 321 KLTVYNISTHPLTIRPGTHLGLALFIYAaRGFASLDARRRYYQLLSGAITLP 372
 
Name Accession Description Interval E-value
PHA03365 PHA03365
hypothetical protein; Provisional
4-421 0e+00

hypothetical protein; Provisional


Pssm-ID: 177602  Cd Length: 419  Bit Score: 705.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119   4 AYPGGAHAALASRRSSFRNSLRRLRPTEKPDTSFMRGVWKYEIFPSYVRVTNKQVLQLDAQCQELPPCPSVGQILSFKLP 83
Cdd:PHA03365    1 AYPGSAHAALASRPKSFRGSFRRLRPSEHPETKFQRGVWKFSIHDSYIKITNKQVLQLTADCQCLPPCPSVGQILKKQIP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119  84 SFSFNTTTYGSRYFTVAFLFFGAEDNEVFLKPFFVMHSDQDIVLSVLNPRSLFIEKGKFTWYIVPIRLVKNPYLYLQILP 163
Cdd:PHA03365   81 NFSFNSTTYGSRGTTTAFYAFGDEDNPVKIKPMFVESSDQEIILRLLNPLELMIPAGSLKFYILPITLVKLDGLYLRCLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 164 GQSDIQLTRSCTQSGDKLNTSEPQIFLSGSPVTSQDECLPYLLAQHTPPFLKSYARIHTFPGKVCPVNAIRRGKGYVRVS 243
Cdd:PHA03365  161 DRSPIIMTTSCSQEGTRLNTEEPQVFLSGSPVSSQDEPLPFLLAQKTKPFLKKFARVHTVQGEVCPVNAVRLGKNYVRVS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 244 VDTPDLKREGPLNVKVGMTLLDDVIIAFRYNPYPKSHWRWDGESTDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITA 323
Cdd:PHA03365  241 VDKPSEKLDRPLPVKVGLTLTNDAIIAFRYNPYPKSPWRWDGASTPIVYFGPPVIIPPNCSTVVEYNNTYYSPLSLKITA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 324 VVVSHSSNPVFYVYPQEWKPGQTLKLTVRNISNNPITIVTGQSMAQAFFIYAGDPSISTIM-RRYIQRQGCALTLPGNIV 402
Cdd:PHA03365  321 IIVNHETNPDFYIYDCEWKPGQTAKLMVTNTSNFPITISTGTHLGQAIFILAPKFGLSTILsRRYLQRLSTALTLPGGVT 400
                         410
                  ....*....|....*....
gi 1624818119 403 VESSSLPTFERINKTFNGN 421
Cdd:PHA03365  401 VNSSKLPKFERLNKSKNGN 419
Herpes_ORF11 pfam04797
Herpesvirus dUTPase protein; This family of proteins are found in Herpesvirus proteins. This ...
37-398 1.92e-158

Herpesvirus dUTPase protein; This family of proteins are found in Herpesvirus proteins. This family includes proteins called ORF10 and ORF11 amongst others. However, these proteins seem to be related to other dUTPases pfam00692 suggesting that these proteins are also dUTPases (Bateman A pers. obs.).


Pssm-ID: 309783  Cd Length: 372  Bit Score: 451.83  E-value: 1.92e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119  37 FMRGVWKYEIFPSYVRVTNKQVLQLDAQCQE-LPPCPSVGQILSFKLPSFSFNTTTYGSR-YFTVAFLFFGAEDNEVFLK 114
Cdd:pfam04797   1 FILGVWSVEIYPTYITVSNKVPLPLPEQDSCtLPFCPSLAEILARKLPSFGFVNSLWGLPtVFSTAFLLFGAPNNRVKVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 115 PFFVMHSDQDIVLSVLNPRSLFIEKGKFTWYIVPIRLVKNPYLYLQILPGQSDIQLTRSCTQSGDKLNTSEPQIFLSGSP 194
Cdd:pfam04797  81 PTVVSDSSEPIIISLRSPLRQMLPPGALKLYILPITLLKLDGLYLRVLKDGSTPVGAPSCLQSGSALATEGPQVFLTGTA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 195 VTSQDEC-LPYLLAQHTPPFLK-SYARIHTFPGKVCPVNAIRRGKGYVRVSVDTPDLKREGPLN----VKVGMTLLDDVI 268
Cdd:pfam04797 161 VSSSDETyTPYFLAQKTPPFLKcGYVRVHAERLEVCRVNSIRLGKNYVRLTVTNTHDTASAKVHfrfqVRVGESLTNCAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624818119 269 IAFRYNPYPKSHWRWDGESTDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITAVVVS-HSSNPVFYVYPQEWKPGQTL 347
Cdd:pfam04797 241 LAFSYNPYPITPWLWAAATVPILYPGPPVVVPPKETTRVEYNNTYEVGTPNATTAVIISgLASNTDFVLRPCEWKPGKTA 320
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1624818119 348 KLTVRNISNNPITIVTGQSMAQAFFIYA-GDPSISTIMRRYIQRQGCALTLP 398
Cdd:pfam04797 321 KLTVYNISTHPLTIRPGTHLGLALFIYAaRGFASLDARRRYYQLLSGAITLP 372
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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