|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 679.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 12 FKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 92 FICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 172 DNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLCLINPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 252 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFWIMLT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1707765446 332 VVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
1.28e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.79 E-value: 1.28e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 17 NSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 97 LHVGRGIYYGSFMY--MYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNA 174
Cdd:COG1290 105 LHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 175 ALNRFFTFH-FLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEK----IPFHPYFTFKDSITFIMMtsLLIMLCLINPY 249
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVF--LGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 250 MLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFW 327
Cdd:COG1290 263 PINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350
....*....|....*....|....*....|....*...
gi 1707765446 328 IMLTVVILLTWIGKRPveEPYIMTGQMLTTMYFFYFIF 365
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.49e-84 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 255.37 E-value: 1.49e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 10 PLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 90 MFFICIYLHVGRGIYYGSFM--YMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1707765446 168 GFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.70e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.58 E-value: 1.70e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 19 LIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 99 VGRGIYYGSFMYMY--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNAAL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1707765446 177 NRFFTFHFLLPFLISAMAVIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-340 |
8.81e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.11 E-value: 8.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 238 SLLIMLCLINPYMLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFY-NKTHFRGI 316
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNP 123
|
90 100
....*....|....*....|....
gi 1707765446 317 QFYPINQIMFWIMLTVVIlltWIG 340
Cdd:TIGR01156 124 FRRPVATTVFLFGTVVAL---WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 679.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 12 FKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 92 FICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 172 DNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLCLINPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 252 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFWIMLT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1707765446 332 VVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 608.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFNVHISYLWDSII 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 596.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 594.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 5 LRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 85 ANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 165 IWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLC 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 245 LINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765446 325 MFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 593.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 5 LRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 85 ANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 165 IWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLC 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 245 LINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765446 325 MFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 590.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFNVHISYLWDS 375
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 585.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFNVHISYLWDSIIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 585.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 4 PLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTI 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 84 HANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 164 WIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIML 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 244 CLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350
....*....|....*....|....*....|....*..
gi 1707765446 324 IMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYF 360
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYF 359
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 547.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 4 PLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTI 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 84 HANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 164 WIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIML 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 244 CLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1707765446 324 IMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 515.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIFNVHISYLWDSIIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-365 |
1.11e-173 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 488.83 E-value: 1.11e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 4 PLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTI 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 84 HANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 164 WIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 244 CLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1707765446 324 IMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-364 |
4.57e-170 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 479.59 E-value: 4.57e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 1 MYKPLRLKHPLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 81 RTIHANGASMFFICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTE 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 161 LVQWIWGGFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 241 IMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1707765446 321 INQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQMLTTMYFFYFI 364
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFL 364
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-364 |
3.41e-131 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 381.21 E-value: 3.41e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 17 NSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 97 LHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNAAL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 177 NRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLClINPY---MLGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 254 PDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFWIMLTVV 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|..
gi 1707765446 334 ILLTWIGKRPV-EEPYIMTGQMLTTMYFFYFI 364
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFL 363
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
1.14e-121 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 355.79 E-value: 1.14e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 13 KIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 93 ICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 173 NAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTsLLIMLCLINPYMLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 253 DPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNkthFRGIQFYPINQIMFWIMLTV 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1707765446 333 VILLTWIGKRPVEEPYIMTGQMLTTMYFFYFIF 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
1.28e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.79 E-value: 1.28e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 17 NSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 97 LHVGRGIYYGSFMY--MYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNA 174
Cdd:COG1290 105 LHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 175 ALNRFFTFH-FLLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEK----IPFHPYFTFKDSITFIMMtsLLIMLCLINPY 249
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVF--LGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 250 MLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFW 327
Cdd:COG1290 263 PINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350
....*....|....*....|....*....|....*...
gi 1707765446 328 IMLTVVILLTWIGKRPveEPYIMTGQMLTTMYFFYFIF 365
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.49e-84 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 255.37 E-value: 1.49e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 10 PLFKIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 90 MFFICIYLHVGRGIYYGSFM--YMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1707765446 168 GFAVDNAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-367 |
3.99e-81 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 252.21 E-value: 3.99e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 13 KIINNSLIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFF 92
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 93 ICIYLHVGRGIYYGSFMYMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVD 172
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 173 NAALNRFFTFHFLLPFLISAMAVIHLFFLHQTGSNNPLGINSNI-EKIPFHPYFTFKDSITFIMMTSLLIMLCLINPYML 251
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 252 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLLLSISILMILPFYNKTHFRGIqfypINQIMFWIMLT 331
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVS 317
|
330 340 350
....*....|....*....|....*....|....*..
gi 1707765446 332 VVILLTWIGKRPVEEPYIMTGQMLT-TMYFFYFIFNV 367
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSvLMVLLLFIFKL 354
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.70e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.58 E-value: 1.70e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 19 LIDLPAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 99 VGRGIYYGSFMYMY--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNAAL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1707765446 177 NRFFTFHFLLPFLISAMAVIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
5.63e-46 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 154.34 E-value: 5.63e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 208 NPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLCLINPYMLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765446 288 KLGGVIALLLSISILMILPFYNKTHFRGiQFYPINQIMFWIMLTVVILLTWIGKRPVEEPYIMTGQM 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
5.74e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 155.09 E-value: 5.74e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 89 SMFFICIYLHVGRGIYYGSFMY--MYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 167 GGFAVDNAALNRFFTFHF-LLPFLISAMAVIHLFFLHQTGSNNPLGINSNIEKIPFHPYFTFKDSITFIMMTSLLIMLCL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1707765446 246 INPYMLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.70e-39 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 135.30 E-value: 2.70e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFYNKTHFRGIQFYPINQIMFWIMLTVVILLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1707765446 339 IGKRPVEEPYIMTGQMLTTMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
4.54e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 125.59 E-value: 4.54e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 23 PAPTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIYLHVGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 103 IYYGSFM--YMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNAALNRFF 180
Cdd:PRK03735 113 FFTGGYKkpRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 1707765446 181 TFH-FLLPFLISAMAVIHLFFLHQTGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.37e-27 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 108.27 E-value: 1.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 25 PTNISFWWNYGSLLGLCLMIQIITGLFLAMHYTSNIELAFSSIIHICRDVNNGWIIRTIHANGASMFFICIYLHVGRGIY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 105 YGSFM--YMYTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGTELVQWIWGGFAVDNAALNRFFTF 182
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1707765446 183 H-FLLPFLISAMAVIHLFFLHQTGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
238-307 |
1.41e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 62.12 E-value: 1.41e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 238 SLLIMLCLINPYMLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPF 307
Cdd:COG5679 50 ALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
238-336 |
5.55e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.40 E-value: 5.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 238 SLLIMLCLINPYMLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFY-NKTHFRGI 316
Cdd:CHL00058 49 ACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNP 123
|
90 100
....*....|....*....|
gi 1707765446 317 QFYPINQIMFWIMLTVVILL 336
Cdd:CHL00058 124 FRRPVATTVFLIGTAVALWL 143
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-340 |
8.81e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.11 E-value: 8.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765446 238 SLLIMLCLINPYMLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLLSISILMILPFY-NKTHFRGI 316
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNP 123
|
90 100
....*....|....*....|....
gi 1707765446 317 QFYPINQIMFWIMLTVVIlltWIG 340
Cdd:TIGR01156 124 FRRPVATTVFLFGTVVAL---WLG 144
|
|
|