|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-573 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 584.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 2 FSICSLSFFSLFFLSLFIFMLGVYYLLFDYSVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 82 ESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 162 FGGWNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVN 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 242 NFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLK 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 322 DCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSM 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 402 SGDNNFFSSFSFDDKGYYFSFGIIIFLIVAVF************************************************ 481
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 482 *******************************************SLRRQRQM-QSSYSFFIYLINYIQSWYDSNFSIYLVT 560
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGgQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1707765456 561 FIFWMFVLILVFF 573
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
20-433 |
2.52e-154 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 453.92 E-value: 2.52e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 20 FMLGVYYLLFDYSVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSM 99
Cdd:MTH00151 19 FPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSM 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 100 AFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYYDFINDSWe 179
Cdd:MTH00151 99 NLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSGW- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 180 mrvISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LVNNFGWFLLLVGCLTMFMA 258
Cdd:MTH00151 178 ---LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSGFSSFLLFISLLTLLMA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 259 GLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPL 338
Cdd:MTH00151 255 GISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 339 TSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFSSFSFDDKGY 418
Cdd:MTH00151 335 TSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDF 414
|
410
....*....|....*
gi 1707765456 419 YFSFGIIIFLIVAVF 433
Cdd:MTH00151 415 YVSLPMLLLSLGALI 429
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
20-433 |
1.41e-147 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 436.77 E-value: 1.41e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 20 FMLGVYYLLFDYSVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSM 99
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 100 AFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNyIYYYDFINDSwe 179
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 180 MRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LVNNFGWFLLLVGCLTMFMA 258
Cdd:MTH00209 174 GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 259 GLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPL 338
Cdd:MTH00209 254 SMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPI 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 339 TSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFSSFSFDDKGY 418
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
410
....*....|....*
gi 1707765456 419 YFSFGIIIFLIVAVF 433
Cdd:MTH00209 414 LNLKPMLVLTLGSIT 428
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-406 |
1.31e-142 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 424.56 E-value: 1.31e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 1 MFSICSLSFFSLFFLSLFIFMLGVYYLLFDYSVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMS 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 81 GESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 161 NFGGWNYIYYYDFINDSWemrvISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLlv 240
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL-- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 241 NNFGWF---LLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMI 317
Cdd:MTH00207 237 SSTYWFnpaLLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 318 HNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLF 397
Cdd:MTH00207 317 HSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFT 396
|
....*....
gi 1707765456 398 YYSMSGDNN 406
Cdd:MTH00207 397 LAVLWSPNS 405
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
32-409 |
3.91e-106 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 331.15 E-value: 3.91e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 32 SVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISI 111
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 112 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALT-NRIGDVAILISIAWML-NFGGWNYIYYYDFINDSWEMrviSLLILL 189
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEISQLFILNLDLTLF---LLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 190 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNN-FGWFLLLVGCLTMFMAGLGANFEFDL 268
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQlILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 269 KKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSL 348
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1707765456 349 SLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFS 409
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
37-398 |
1.49e-96 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 306.69 E-value: 1.49e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 37 WELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWD 116
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 117 GLGLVSYCLVIYYQNVKSYNAGMLTA-LTNRIGDVAILISIAWMLN-FGGWNY---IYYYDFINDSWEMRVISLLILLAA 191
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 192 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LVNNFGWFLLLVGCLTMFMAGLGANFEFDLKK 270
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 271 IIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSL 350
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1707765456 351 CGLPFLAGFYSKDLILE-LVCLSWMNFLIFFLYFFSTGLTASYSFRLFY 398
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
32-403 |
2.67e-94 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 300.54 E-value: 2.67e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 32 SVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISI 111
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 112 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALT-NRIGDVAILISIAWM-LNFGGWNyiyyydfINDSWEMRVISLLIL- 188
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWE-------IQQLFSPTQTPTLPLl 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 189 ---LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFL-LLVGCLTMFMAGLGANF 264
Cdd:MTH00004 214 gliLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 265 EFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFN 344
Cdd:MTH00004 294 QNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLT 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765456 345 VSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSG 403
Cdd:MTH00004 374 IGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTG 432
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
49-397 |
4.18e-85 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 277.04 E-value: 4.18e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 49 MTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 129 YQNVKSYNAGMLTA-LTNRIGDVAILISIAWML-NFGGWNY----IYYYDFINDSWEM-RVISLLILLAAMTKSAQIPFS 201
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdevfAAAPQFFGLGWSAlTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 202 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLfELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 281 GLMMsiLAMG---YPkVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLA 357
Cdd:PRK06590 318 GYMF--LALGvgaYA-AAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1707765456 358 GFYSKDLILElVCLSWMNFLIFFLYFFSTGLTASYSFRLF 397
Cdd:PRK06590 395 GFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-433 |
5.11e-85 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 276.47 E-value: 5.11e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 37 WELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 117 GLGLVSYCLV-IYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLN-FGGWNY--IYYYDFINDSWEMRVISLLILLAAM 192
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 193 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKI 271
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 272 IALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 351
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 352 GLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFSSFSFDDKGYYFSFGIIIFLIVA 431
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
..
gi 1707765456 432 VF 433
Cdd:TIGR01974 465 VF 466
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
40-407 |
5.98e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 274.16 E-value: 5.98e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 40 FSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLG 119
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 120 LVSYCLVIYYQNVKSYNAGMLTA-LTNRIGDVAILISIAW-MLNFGGWNYIYYYDFINDSWEMRVISLL-ILLAAMTKSA 196
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 197 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmlLVNNFGWFL---LLVGCLTMFMAGLGANFEFDLKKIIA 273
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSP--LISNSPWFLslcLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 274 LSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGL 353
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1707765456 354 PFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNF 407
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSF 463
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
32-400 |
9.90e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 272.55 E-value: 9.90e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 32 SVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISI 111
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 112 LLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALTNRIGDVAILISIAW-MLNFGGWNYIYYYDFINDSwemrVISLLIL- 188
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQIFLLNDNS----TLPLLGLi 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 189 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFL-LLVGCLTMFMAGLGANFEFD 267
Cdd:MTH00066 215 LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQND 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 268 LKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSS 347
Cdd:MTH00066 295 IKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGS 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1707765456 348 LSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYS 400
Cdd:MTH00066 375 LALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFS 427
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-403 |
9.30e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 270.19 E-value: 9.30e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 37 WELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWD 116
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 117 GLGLVSYCLVIYYQNVKSYNAGMLTA-LTNRIGDVAILISIAW-MLNfggwnyiyyydfiNDSWEMRVISLL-------- 186
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLN-------------LNSWDLQQIFMLnpnnsnlp 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 187 ---ILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLvgCL----TMFMAg 259
Cdd:MTH00108 213 lmgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTL--CLgaitTLFTA- 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 260 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLT 339
Cdd:MTH00108 290 ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFT 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765456 340 SVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSG 403
Cdd:MTH00108 370 STALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLG 433
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-401 |
1.03e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 267.85 E-value: 1.03e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 53 FDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 133 KSYNAGMLTA-LTNRIGDVAILISIAWM---LNfggwnyiyyydfindSWEMRVISLL------------ILLAAMTKSA 196
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMatnLN---------------SWEIQQIFALskdfdltlpllgLILAATGKSA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 197 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNfgwfLLLVGCL------TMFMA--GLGANfefDL 268
Cdd:MTH00137 231 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 269 KKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSL 348
Cdd:MTH00137 304 KKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSL 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1707765456 349 SLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRL-FYYSM 401
Cdd:MTH00137 384 ALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
37-406 |
5.40e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 241.90 E-value: 5.40e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 37 WELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWD 116
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 117 GLGLVSYCLV-IYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGG---WNYIYYYDFINDSWEMRVISLLILLAAM 192
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGsldFSSVFNMVVSAPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 193 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLL-LVGCLTMFMAGLGANFEFDLKKI 271
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 272 IALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 351
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1707765456 352 GLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNN 406
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTN 436
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
51-406 |
1.35e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 238.37 E-value: 1.35e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 51 LIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV-IYY 129
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 QNVKSYNAGMLTALTNRIGDVAILISIAWMLN-FGGWNYIYYYDFIN---DSWEMRVISLLILLAAMTKSAQIPFSSWLP 205
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVtniNKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLL-LVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 284
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 285 SILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDL 364
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1707765456 365 ILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNN 406
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
34-433 |
1.05e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 217.86 E-value: 1.05e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 34 FIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILL 113
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 114 GWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGgwnyiyyYDFINDSWEMRVISLLILLAAMT 193
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 194 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIA 273
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 274 LSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGL 353
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 354 PFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFSSFSFDDKGYYFSFGIIIFLIVAVF 433
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLVFFSVFFLW 416
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
49-404 |
1.26e-63 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 221.05 E-value: 1.26e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 49 MTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 128 YYQNVKSYNAGMLTALTNRIGDVAILISIA---WMLNFGGWNYI--YYYDFIND----SWEMRVISLLILLAAMTKSAQI 198
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWATGSFDFDGIadRLSELVSSgavsGWLALLLCILVFLGPMAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 199 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTL 277
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTI 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 278 SQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKD--------CQDIRFMGSIVNFMPLTSVCFNVSSLS 349
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1707765456 350 LCGLPFLAGFYSKDLILELVCLSwmNFLIFFLYFFSTGLTASYSFRLFYYSMSGD 404
Cdd:PRK07376 405 ISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
6.95e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 190.22 E-value: 6.95e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 105 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIY----YYDFINDSWE 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 180 MRVISLLILLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGW--FLLLVGCLTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 257 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIV 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1707765456 334 NFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
20-368 |
5.78e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 197.10 E-value: 5.78e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 20 FMLGVYYLLFDYSVFIEweLFSLNGSMVVMT---LIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFI 96
Cdd:MTH00032 44 LFLAYEVLINDAVVHIE--LYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFT 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 97 LSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQN-VKSYNAGMLTALTNRIGDVAILISIAWM------LNFGGWNYIY 169
Cdd:MTH00032 122 FLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGS 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 170 YYDFINDSWEMR------------VISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM 237
Cdd:MTH00032 202 VGSGIMDRGYYGggayesplapfaIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 238 LLVNNFGWFLLLV-GCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM-GYPKVAFFHLLTHALFKALLFMCAGS 315
Cdd:MTH00032 282 FEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGS 361
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1707765456 316 MIHNLK-DCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEL 368
Cdd:MTH00032 362 VIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-399 |
2.58e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 181.88 E-value: 2.58e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 QNVKSYNAGMLTALTNRIGDVAILISIAWM-LNFGGWNYIYYYDFIN--DSWEMRVISLLILLAAMTKSAQIPFSSWLPA 206
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 207 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLL----VNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 282 LMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAG 358
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765456 359 FYSKDLILELVCLSWMNFLIFFLyFFSTGLTASYSFRLFYY 399
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLAAVL-LLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-367 |
7.34e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 185.63 E-value: 7.34e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 43 NGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 123 YCLVIyyQNVKSYNAG-MLTALTNRIGDVAILISIAWMLNFGGWNYIyyyDFI--NDSWEMR-----VISLLILLAAMTK 194
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAAVAIAATQTGTTSL---SGIlhSDVWAEKpglttVVAVLIAVAAFTK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 195 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLVNNFGWFLLLVGC--LTMFMAGLGANFEFDLKKII 272
Cdd:PRK12650 222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLT 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 273 ALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLS 349
Cdd:PRK12650 301 AYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALS 379
|
330
....*....|....*...
gi 1707765456 350 LCGLPFLAGFYSKDLILE 367
Cdd:PRK12650 380 MAAVPPLFGFVSKEGMLT 397
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-421 |
8.67e-48 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 177.78 E-value: 8.67e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 70 LVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALTNRIG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 149 DVAILISIA---WMLN-------FGGWNYIYYYDFINdSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALV 218
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVN-LLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 219 HSSTLVTAGVYLLIR----FSPMLLVNNFgwfLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKV 294
Cdd:CHL00025 265 HAATMVAAGIFLVARllplFIVIPYIMNL---ISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRA 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 295 AFFHLLTHALFKALLFMCAGSMIHNL--------KDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:CHL00025 342 ALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765456 367 ElvcLSWMNFLIF-FLYFFSTGLTASYSFRLFYYSMSGD-NNFFSSFSFDDKGYYFS 421
Cdd:CHL00025 422 N---DSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlRVHFQNYSGKKNSSFYS 475
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
9.84e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 177.80 E-value: 9.84e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY-YQNV 132
Cdd:PRK12647 63 DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHERE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 133 KSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYY----DFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAM 208
Cdd:PRK12647 143 AARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELlasgDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAM 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 209 AAPTPVSALVHSSTLVTAGVYLLIRFSPmLLVNNFGWF--LLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSI 286
Cdd:PRK12647 223 EAPTPVSAYLHSATMVKAGIYLLARLNP-VLGGTPLWQtiLPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVML 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 287 LAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKD 363
Cdd:PRK12647 302 LGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKE 380
|
....
gi 1707765456 364 LILE 367
Cdd:PRK12647 381 LIYE 384
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
50-367 |
1.78e-47 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 177.35 E-value: 1.78e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 -QNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYY----DFINDSWEMRVISLLILLAAMTKSAQIPFSSWL 204
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAViasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLM 283
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 284 MSILAMGYPKV----------------AFFHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSS 347
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 1707765456 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-395 |
5.76e-47 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 176.92 E-value: 5.76e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 134 SYNAGMLTALT-NRIGDVAILisiAWMLNFGgwnyiyyydFINDSWEMRVI----------------SLLILLAAMTKSA 196
Cdd:PRK12648 155 DARRGARMALTvTGAGGLALL---AGVLLLG---------HIVGSYDLDVVlaagdlirahplyppaLVLILLGAFTKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 197 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFgWFLL--LVGCLTMFMAGLGANFEFDLKKIIAL 274
Cdd:PRK12648 223 QFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEE-WFWIvgGAGLITLLLGAYFALFQHDLKGLLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 275 STLSQLGLMMSILAMGYPK---VAFFHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 351
Cdd:PRK12648 302 STISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMA 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1707765456 352 GLPFLAGFYSKDL----ILELVCLSWMNFLIFFLYFFSTGLTASYSFR 395
Cdd:PRK12648 381 GVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-367 |
3.87e-44 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 168.01 E-value: 3.87e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSEDYMSGES-NMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 132 VKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIY----YYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAA 207
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSI 286
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 287 LAMG--------------YPKVAF---FHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLS 349
Cdd:PRK12646 317 VGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALS 395
|
330
....*....|....*...
gi 1707765456 350 LCGLPFLAGFYSKDLILE 367
Cdd:PRK12646 396 MAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-398 |
8.96e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 167.41 E-value: 8.96e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYM-SGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 129 YQNVKSYNAGMLTALT-NRIGDVAILISIAWMLNFGGWNYIYyyDFINDSWEMRVIS---LLILLAAMTKSAQIPFSSWL 204
Cdd:PRK12644 149 YAERAASRRAALQALLvTTAGGLAMLVGIIILGQAAGTYRLS--ELLADPPTGPAVSvavVLILVGALSKSAIVPFHFWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFgWFLLLV--GCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 282
Cdd:PRK12644 227 PGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPV-WRPTVLvlGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 283 MMSILAMGYPKVAFFHL---LTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGF 359
Cdd:PRK12644 306 LTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGF 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1707765456 360 YSKDLILELV----CLSWMNFLIFFLYFFSTGLTASYSFRLFY 398
Cdd:PRK12644 385 VAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
22-366 |
1.22e-42 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 159.37 E-value: 1.22e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 22 LGVYYLLFDYSVFIEWELFSLnGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMS-------GESNMNRFIMLVLM 94
Cdd:PRK06525 43 SLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 95 FILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYYDFI 174
Cdd:PRK06525 122 FIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 175 NDSWEMRVIsLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspMLLVNN----FGWFLLLV 250
Cdd:PRK06525 202 HGSLKYLVF-LGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPiphvIGYVGAVM 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 251 GCLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-----MSIL--AMGYpKVAFFHLLTHALFKALLFMCAGSMIHNLkDC 323
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMffglsLAILgsRLAL-EGSIAYIFNHAFAKSLFFLVAGALSYSC-GT 356
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1707765456 324 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK06525 357 RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
50-403 |
9.23e-42 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 160.86 E-value: 9.23e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGES-NMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 129 -YQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYY----DFINDSWEMRVISLLILLAAMTKSAQIPFSSW 203
Cdd:PRK12645 153 wYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMianaDEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNfGWFLL--LVGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTvtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 282 LMMSILAMG------------YPKVAF----FHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNV 345
Cdd:PRK12645 312 LIMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALI 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765456 346 SSLSLCGLPFLAGFYSKDLILE---------LVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSG 403
Cdd:PRK12645 391 GALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
19-397 |
1.22e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 154.65 E-value: 1.22e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 19 IFMLGVYYLLFDY-SVFIEWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFIL 97
Cdd:MTH00063 8 LLCLLIFFLFLVGvSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 98 SMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIawmlnfgGWNYIYYYDFInds 177
Cdd:MTH00063 88 VMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLI-------GLSCWGGSGSF--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 178 wemrVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCLTMFM 257
Cdd:MTH00063 158 ----LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 258 AGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHN-----LKDCQDIRFMGSI 332
Cdd:MTH00063 234 TGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGsggsqSSNCVYSSILYGS 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765456 333 VNFMPLTSVCfnvssLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTGLTASYSFRLF 397
Cdd:MTH00063 314 WNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC 373
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-367 |
6.72e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 137.27 E-value: 6.72e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 47 VVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV 126
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 127 IYYQNVKSYNAGMLTA-LTNRIGDVAILISIAWMLNFGGWNYI-------YYYDFINDSWEMRVISLLILLAAMTKSAQI 198
Cdd:PRK12649 152 GYWRHRPESVYGATKSlLITAGGGLFMFAGFLLLHVITGTYDIatilqdsELIENIKGHPLFLITLILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 199 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLVNNFGWFLLL--VGCLTMFMAGLGANFEFDLKKIIALST 276
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHP-IFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 277 LSQLGLMMSIlaMGYPK---------VAFFHLLTHALFKALLFMCAGSMIHNLKdCQDIRFMGSIVNFMPLTSVCFNVSS 347
Cdd:PRK12649 311 ISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340
....*....|....*....|
gi 1707765456 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-399 |
3.00e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 132.70 E-value: 3.00e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSedYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 QNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGW-NYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAM 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTlNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 209 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 282
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 283 MMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGF 359
Cdd:PRK08375 310 ILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765456 360 YSK-DLILELVCLSWMNFLIFFLyfFSTGLTASYSFRLFYY 399
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-315 |
1.34e-28 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 119.42 E-value: 1.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 56 MSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFImLVLMFIL-SMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKs 134
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 135 ynAGMLTA----LTNRIGDVAILISIA-WMLNFGGWnyiyyydFINDSWE----------MRVISLLILLAAMTKSAQIP 199
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSL-------SLSALWAhlaaqgaspsLQAAALLLVLAVILKTAQLP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 200 FSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLLVNNFG-WFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLS 278
Cdd:PRK08168 219 VHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVA 297
|
250 260 270
....*....|....*....|....*....|....*..
gi 1707765456 279 QLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGS 315
Cdd:PRK08168 298 QMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-372 |
3.36e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 119.61 E-value: 3.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 94 MFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTALTNRIGDVAILISIAWMlnfggWNYIYYYD 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 173 FIN------DSWEMRVISLLILLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGW 245
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 246 ---FLLLVGCLTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILAMGYPKVA-------FFHLLTHALFKAL 308
Cdd:PRK06521 275 wgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSL 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765456 309 LFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLS 372
Cdd:PRK06521 355 LFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
49-367 |
8.15e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 118.29 E-value: 8.15e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 49 MTLIFDWMSLIFMSFVMFISSLVIYYSEDY---MSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 126 VIY-YQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGwnyiyYYDFINDSWEMRVISLLILLAAMT---KSAQIPFS 201
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG-----SFELSPLGASAGILSLVFLLLFLGfgiKAGIIPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 202 SWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGW--FLLLVGCLTMFMAGLGANFEFDLKKIIALSTLS 278
Cdd:PRK08667 226 KWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 279 QLGLMM--------------SILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFN 344
Cdd:PRK08667 305 NIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 1707765456 345 VSSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-398 |
6.23e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 112.31 E-value: 6.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 61 MSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGML 140
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 141 TA-LTNRIGDVAILISIAWMLNF-GGWNYIYYYDFIN----DSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPV 214
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtanlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 215 SALvHSSTLVTAGVYLLIRFSPML----LVNNFgwfLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMG 290
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLalspVALTV---LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 291 YPKVAFFHLLTHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYS-KDLILELV 369
Cdd:PRK07390 331 QPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLW 409
|
330 340
....*....|....*....|....*....
gi 1707765456 370 CLSWMNFLIFFLYFFSTGLTASYSFRLFY 398
Cdd:PRK07390 410 AVSPWLVGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-398 |
8.57e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 111.22 E-value: 8.57e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 QNVK-SYNAGMLTALTNRIGDVAILISIAWM------LNF--------GGWNYIYYYDFINDSWEMRVISLLILLAAMTK 194
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 195 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF---------SPMLLVNNFGWFLLLVGCLTMFMAGLGANF 264
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 265 EFDLKKIIALSTLSQLGLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSV 341
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765456 342 CFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTgLTASYSFRLFY 398
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-367 |
9.61e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 107.35 E-value: 9.61e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 82 ESNMNRFI-MLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAwmL 160
Cdd:PRK07234 89 ESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV--L 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 161 NFGGWNYIYYYDFINDSWEmrvISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLLV 240
Cdd:PRK07234 167 VYQANGTFAFSGLATADPE---AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LDV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 241 NNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLmmsILAMgyPKVAFFHLLTHALFKALLFMCAGSmIHNL 320
Cdd:PRK07234 242 PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPSR 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1707765456 321 KDCQDIRFMGSIVNFMPLTsvcfnVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK07234 316 NFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-408 |
3.72e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.05 E-value: 3.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 58 LIFMSFVMFISSLVIYYSEDYMSGES--NMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSY 135
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 136 NAGM--LTALTNrigDVAILISIAWMLNFGGWNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTP 213
Cdd:PRK06589 166 SGGYkyLKILMI---SALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYP 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 214 VSALVHSSTLVTAGVYLLIRFSPML--------LVNNFGWfLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 285
Cdd:PRK06589 243 VSALLHAVIVVKTGLFCIYKILLYIfglsylqrIFAEFNW-LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALL 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 286 ILAMGYPK---VAFFHLLTHALFKALLFMCAGSmIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSK 362
Cdd:PRK06589 322 SAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1707765456 363 DLILELVCLS---WMNFLIFFLYFFSTGLTASYSFRLFY--YSMSGDNNFF 408
Cdd:PRK06589 401 FLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSsiYKPSLSENSF 451
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-367 |
2.69e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 103.64 E-value: 2.69e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNV- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 133 KSYNAGMLTALTNRIGDVAILISIAwmLNFGGWN-----YIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAA 207
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGtlnmaYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDA 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 208 M-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:PRK08376 247 YpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 282 LMM-----SILAMGYPKV----------AFFHLLTHALFKALLFMCAGSMIHNLkDCQDIRFMGSIVNFMPLTSVCFNVS 346
Cdd:PRK08376 325 YMLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIG 403
|
330 340
....*....|....*....|.
gi 1707765456 347 SLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYE 424
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
39-315 |
2.28e-22 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 100.50 E-value: 2.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 39 LFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRFIMLvLMFILSMAFLI-ISPNLISILLGWdG 117
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFAL-FTFTTGFASLAwLSGDLRLMALCW-G 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 118 LGLVSYCLVIyyqNVKSY-----NAGMLTALTNRIGDVAILISIAWMLNFGGwNYIYYYDFINDS------WEMRVISLL 186
Cdd:PRK08601 134 ATLLGLTLLI---GLNKGwkvarEAAKISGMLFLISWLALALAIVWLFIATG-EWQLTSVLSNENlaqlgtWEKTGINLL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 187 ILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPmLLVNNFGWFLLLVGCLTMFMAGLGANF-E 265
Cdd:PRK08601 210 LILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIFASISVLIGTGISLvQ 287
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1707765456 266 FDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGS 315
Cdd:PRK08601 288 VDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
85-396 |
1.03e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 92.52 E-value: 1.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 85 MNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLN-FG 163
Cdd:PRK08377 107 IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGaTG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 164 GWNYIYYYDFIN--DSWEMRVISLLILLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLV 240
Cdd:PRK08377 187 TLNMAHIAQLAGtiDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQN 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 241 ----NNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCA 313
Cdd:PRK08377 266 angwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAV 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 314 GSMIHNLKDCQDIRFMGSIVNfMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWMNFLIFFLYFFSTGLTASYS 393
Cdd:PRK08377 346 GYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYY 423
|
...
gi 1707765456 394 FRL 396
Cdd:PRK08377 424 FRL 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
20-398 |
1.75e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 88.90 E-value: 1.75e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 20 FMLGVYYLLFDYSVFI-EWELFSLNGSMVVMTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMnrFIMLVLMFILS 98
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY--FNMFALMSLAG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 99 MAFLIISPNLISILLGWDGLGLVSYcLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLN-FGGWNYI-YYYDFIND 176
Cdd:PRK08668 111 VLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFAdISQGLIND 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 177 -SWEMRVISLLILLAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLL-------------V 240
Cdd:PRK08668 190 tSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPgtklfsefgtyrgV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 241 NNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMI 317
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVI 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 318 HNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMnFLIFFLYFFSTGLTASYSFRLF 397
Cdd:PRK08668 349 YRTGT-TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFGSIGSFLYVFRPL 426
|
.
gi 1707765456 398 Y 398
Cdd:PRK08668 427 A 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
185-397 |
1.01e-17 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 86.29 E-value: 1.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 185 LLILLAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLL---VNNFGWFLLLVGCLTMFMAGL 260
Cdd:COG1008 213 LAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 261 GANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMP 337
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLGIFALNPlglQGAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMP 370
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 338 LTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSwmNFLIFFLYFFSTGLTASYSFRLF 397
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-366 |
1.53e-16 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 82.63 E-value: 1.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 108 LISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGwnyiyYYDFINDSWEMRVISLLI 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETG-----SFAFGAIAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 188 LLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmllvnnfGWFLLLVgcLTMFMAGLGANF--- 264
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIY--IGAAMAVYGVFFall 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 265 EFDLKKIIALSTLSQLGLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSV 341
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTAL 339
|
250 260
....*....|....*....|....*
gi 1707765456 342 CFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK12668 340 FCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
54-366 |
6.38e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 77.30 E-value: 6.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSedYMSGESNMNRF----IMLVLMFILSMAFLiiSPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYG--FGDIEHSGRRYgfppFILLLMAGVIGSFL--TGDLFNLYVWFEVMLIASFVLITLG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 130 QNVKSYNAGMLTALTNRIGDVAILISIAWM------LNFGgwNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSsW 203
Cdd:PRK12663 152 QEREQLRGAIKYVVLNLIGSWLFLLGIGLLygtfgtLNMA--HIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-W 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFG---WFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK12663 229 LPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 281 GLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHnLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLA 357
Cdd:PRK12663 309 GFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFS 387
|
....*....
gi 1707765456 358 GFYSKDLIL 366
Cdd:PRK12663 388 GFWGKVLLV 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
58-432 |
1.78e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.13 E-value: 1.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 58 LIFMSFVMFISSLVIYYSEDYMSGEsnmnrfiMLVLMFILSMAFLII--SPNLISILLGWDGLGLVSYCLVIYYQNVKSY 135
Cdd:TIGR01972 83 VLLTALLTLLAILASWESIQKRVKE-------FYALLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 136 NAGMLTALTNRIGDVAILISIAWMLNFGGWNYIY--YYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMA-APT 212
Cdd:TIGR01972 156 YAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLleLLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPT 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 213 PVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCL---TMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSILA 288
Cdd:TIGR01972 236 AGSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALgviAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 289 MGYPKV--AFFHLLTHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIl 366
Cdd:TIGR01972 315 FNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI- 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765456 367 eLVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSG--DNNFFSSFSFDDKGYYFSFGIIIFLIVAV 432
Cdd:TIGR01972 393 -LLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGelSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-407 |
2.25e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.76 E-value: 2.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 180 MRVISLLILLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGW---FLLLVGCLTM 255
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 256 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHnLKDCQDIRFMGSI 332
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765456 333 VNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNF 407
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKG 439
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-362 |
2.36e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 75.54 E-value: 2.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGEsNMNR--FIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV- 126
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 127 IYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNF-GGWNYIYYYDFINDSWEMR---VISLLILLAAMT-KSAQIPFS 201
Cdd:COG1007 144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSAVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 202 SWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF---SPMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALST 276
Cdd:COG1007 224 MWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 277 LSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGL 353
Cdd:COG1007 302 IAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGI 381
|
....*....
gi 1707765456 354 PFLAGFYSK 362
Cdd:COG1007 382 PPTAGFFGK 390
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.30e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.71 E-value: 1.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 198 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGW--FLLLVGCLTMFMAGLGANFEFDLKKIIAL 274
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 275 STLSQLGLMMSILAMGYPKVA--------------FFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTS 340
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1707765456 341 VCFNVSSLSLCGLPFLAGF 359
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-367 |
8.86e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.77 E-value: 8.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 182 VISLLILLAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLV-GCLTMFMAG 259
Cdd:PRK12665 210 ALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVvALLTMVVGI 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 260 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVNFM 336
Cdd:PRK12665 289 LGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVaglSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKAS 367
|
170 180 190
....*....|....*....|....*....|.
gi 1707765456 337 PLTSVCFNVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-404 |
3.21e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 69.08 E-value: 3.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 143 LTNRIGDVAILISIAWM-----LNFGGWNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 217 LvHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCLTMFM---AGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYP 292
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAiiyGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 293 KV--AFFHLLTHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVC 370
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI--LLG 403
|
250 260 270
....*....|....*....|....*....|....
gi 1707765456 371 LSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGD 404
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-397 |
5.78e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.24 E-value: 5.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 185 LLILLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML----LVNNFGWFLLLVGCLTMFMAG 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 260 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAF---FHLLTHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVNFM 336
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1707765456 337 PLTSVCFNVSSLSLCGLPFLAGFYSKDLIL-ELVCLS-WMNFLIFFLYFFSTGLTASYSFRLF 397
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
180-366 |
3.01e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 65.72 E-value: 3.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 180 MRVISLLILLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML---LVNNFGWFLLLV-GCLT 254
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIdaaIGSDFPGRLLLIfGLLS 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 255 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPkVAFF----HLLTHALFKALLFMCAGSMIHNlKDCQDIRFMG 330
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIR 369
|
170 180 190
....*....|....*....|....*....|....*.
gi 1707765456 331 SIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-362 |
1.60e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.30 E-value: 1.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 50 TLIFDWMSLIFMSFVMFISSLVIYYSEDYMSgESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 129 YQNVKSYNAGMLTALTNRIGDVAILISIAWM------LNFGGWNYIYYYDFINDSweMRVISLLILLAAMT-KSAQIPFS 201
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLygatgsLSFAGIAKALADGSGNSL--LLLFGLVFLLVGLAfKLSAVPFH 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 202 SWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLLVNNFGW---FLLLVGCLTMFMAGLGANFEFDLKKIIALSTL 277
Cdd:PRK05777 225 MWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 278 SQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLP 354
Cdd:PRK05777 304 AHAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIP 383
|
....*...
gi 1707765456 355 FLAGFYSK 362
Cdd:PRK05777 384 PTAGFWGK 391
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
49-367 |
3.03e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 59.27 E-value: 3.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 49 MTLIFDWMSLIFMSFVMFISSLVIYyseDYMSGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 129 YQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGG---WNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLP 205
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGtlnITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 206 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 281 GLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGSmIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLA 357
Cdd:PRK06277 303 GYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|
gi 1707765456 358 GFYSKDLILE 367
Cdd:PRK06277 382 GFQSKLMLAQ 391
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
26-429 |
8.90e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 58.04 E-value: 8.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 26 YLLFDYSVFIEWELFSLNGSMVVMtLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGE-SNMNRFIMLVLMFILSMAFLII 104
Cdd:TIGR01770 42 LLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEkINKFEFYILLLFALLGIFLLVS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 105 SPNLISILLGWDGLGLVSYCLVIY-YQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYI-----YYYDFINDSW 178
Cdd:TIGR01770 121 SNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFedlllFLSNGMLNIS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 179 EMRVISLLILLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLLVNNFGW---FLLLVGCLT 254
Cdd:TIGR01770 201 LLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYILFGFSEAwqiFLAIIAFLS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 255 MFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYP--KVAFFHLLTHALFKALLFMCAGSM-IHNLKDCQDIRFMG 330
Cdd:TIGR01770 280 MLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLEgiKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWIEYISDFA 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 331 SIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWMNFLIFFLYFFSTGLTASYSFRL---FYYSMSGDNNF 407
Cdd:TIGR01770 360 GLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF-ALLKSGLYWLAVIAVLTSVIGAFYYLRVvkvMYFDKPERRIP 438
|
410 420
....*....|....*....|....
gi 1707765456 408 FSSFSFDDKG--YYFSFGIIIFLI 429
Cdd:TIGR01770 439 SNPQSKAQSLllSISALFILFLGL 462
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-366 |
3.04e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 56.40 E-value: 3.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 185 LLILLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPMLL------VNNFGWFLLLVGCL-TMF 256
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFgpeagaSAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 257 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSM----------------I 317
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1707765456 318 HNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-362 |
3.33e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.08 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 54 DWMSLIFMSFVMFISSLVIYYSEDYM-SGESNMNRFIMLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 132 VKSYNAGMLTALTNRIGDVAILISIAWM--LNFGGWNYIYYYDFINDSWEMRVISLLILLAAMT-----KSAQIPFSSWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML---LVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPfyfSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 281 GLMMSILAMGYPKVAFFHLLTHALFkaLLFMCAGS----MIHNLKDCQD-IRFMGSIVNFMPLTSVCFNVSSLSLCGLPF 355
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 1707765456 356 LAGFYSK 362
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-362 |
3.65e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.81 E-value: 3.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 185 LLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWFLLLVGCLTMFMAGLG--- 261
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivf 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 262 ----ANFEFDLKKIIALSTLSQLG---LMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCqDIRFMGSIVN 334
Cdd:PRK12662 293 gsvlAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWK 371
|
170 180
....*....|....*....|....*...
gi 1707765456 335 FMPLTSVCFNVSSLSLCGLPFLAGFYSK 362
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-369 |
5.94e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.75 E-value: 5.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 184 SLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNnfgwFLLLVGCLTMFMAGLGAN 263
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 264 FEFDLKKIIALSTLSQLGLMMSILAMGyPKVAFFHLLTHALFKALLFMcagsMIHNLKdCQDIRFMGSIVNFMPLTSVCF 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....*..
gi 1707765456 344 NVSSLSLCGLPFLAGFYSKDLIL-ELV 369
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-400 |
1.56e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.88 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 26 YLLFDYSVFIEWELFSLNGSmvvmTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMnrfiMLVLMFILSMAFLIIS 105
Cdd:PRK12664 11 YGFFFGLIFIVLPLLLYDWS----EPVYNLDLVLFIVLSFSLALIFLYILPIKNMRFSEM----LCYLLYYISSIAAISS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 106 PNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYyydfindswemrviSL 185
Cdd:PRK12664 83 SSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYC--------------KL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 186 LILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLLVNNFGWFLLLVGCLTMFMAGLGANFE 265
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 266 FDLKKIIALSTLSQLGLMMSILAMGYPK-----VAFFHLLTHALFKALLFMCAGSMIHNLKDCqDIRFMGSIVNfMPLTS 340
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKF-NLNRVGGLFK-MSLEA 300
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1707765456 341 VCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYF--FSTGLTASYSFRLFYYS 400
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYA 362
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-367 |
4.73e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.40 E-value: 4.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 60 FMSFVMFISSLVIYYSEDYMSGESNMNRFI-MLVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 139 MLTALTNrigdvailISIAWMLNFGGWNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPF--SSWLPAAMA-APTPVS 215
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 216 AlVHSSTLVTAGVYLLIR---FSPMLLVNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALST-------LSQLGLMM- 284
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTienngaiLVALGLYMv 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 285 -----SILAMGYPKVAFFHLLTHALFKALLFMCAGSMihnlkDCQDIRFMGSIVNFMplTSVCFNVSSLSLCGLPFLAGF 359
Cdd:PRK06459 275 tkqliTSIEHFSLITVILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGG 347
|
....*...
gi 1707765456 360 YSKDLILE 367
Cdd:PRK06459 348 VASWLLLE 355
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
188-361 |
5.85e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 188 LLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLVN---NFGWFLLLVGCLTMFMAGLGAN 263
Cdd:PRK12561 192 LIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDahvYFAPALAILGVVNIIYGALNAF 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 264 FEFDLKKIIALSTLSQLGLMM----SILAMGYPKvAFFHLLTHALFKALLFMCAGSMIHNLKDCQdIRFMGSIVNFMPLT 339
Cdd:PRK12561 271 AQDNVKRRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTHTLS-IPNMGGLAKVMPKT 348
|
170 180
....*....|....*....|..
gi 1707765456 340 SVCFNVSSLSLCGLPFLAGFYS 361
Cdd:PRK12561 349 FALFTASSMASLALPGMSGFVS 370
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
186-392 |
1.50e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.70 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 186 LILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWF---LLLVGCLTMFMAGLGA 262
Cdd:PRK07363 210 GLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVapgLAIIGTISVIYGALSA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 263 NFEFDLKKIIALSTLSQLGLMMSILAMGYPKV---AFFHLLTHALFKALLFMCAGSMIHNL--KDCQDIRFMGSIVNFMP 337
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIVERKVgtRDLDVLNGLMNPIRGLP 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765456 338 LTSVCFNVSSLSLCGLPFLAGFYSKDLILElvcLSWMNFLI-FFLYFFSTGLTASY 392
Cdd:PRK07363 370 LTSALLVLAGMASAGIPGLVGFVAEFIVFQ---GSFSTFPIpTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
187-392 |
1.66e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.31 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 187 ILLAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLVNNFGWF---LLLVGCLTMFMAGLGA 262
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 263 NFEFDLKKIIALSTLSQLGLMMSILAMGYP---KVAFFHLLTHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVN---FM 336
Cdd:PRK06473 290 IAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 337 PLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvclswMNFLIF----FLYFFSTGLTASY 392
Cdd:PRK06473 369 PITGSLMILGVMASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
154-400 |
3.34e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.03 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 154 ISIAWMLNFGGWNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 234 FSPMLlvnnFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGypkvAFFHLLTHALFkaLLFMCA 313
Cdd:MTH00200 145 LAPAL----NSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLYLLLY--VIITLT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 314 GSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILelvclswMNFLIFFLYFFSTGLTASYS 393
Cdd:MTH00200 215 VFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 1707765456 394 FRLFYYS 400
Cdd:MTH00200 288 LSLFFYL 294
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
49-88 |
4.46e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 38.18 E-value: 4.46e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1707765456 49 MTLIFDWMSLIFMSFVMFISSLVIYYSEDYMSGESNMNRF 88
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
94-396 |
8.96e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.94 E-value: 8.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 94 MFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQN-VKSYNAGMLTALTNRIGDVAILISIAWMLNFGGWNYIYYYD 172
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 173 FI------NDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVyllirFSPMLLVNNFGW 245
Cdd:MTH00196 81 LVlnsgqsFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGI-----FSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 246 FLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFkALLFMCAGSMIHNLKDCQD 325
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKN 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1707765456 326 --IRFMGsIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWMNFLIFFLYFFSTGLTASYSFRL 396
Cdd:MTH00196 233 liIEFSG-LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL-LSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
1.11e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.45 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 184 SLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNnfgwFLLLVGCLTMFMAGLGAN 263
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 264 FEFDLKKIIALSTLSQLGLMMSILAMGyPKVAFFHLLTHALFKALLFMcagsMIHNLKDCQDIRFMGSIVNFMPLTSVCF 343
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|....
gi 1707765456 344 nVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:MTH00070 246 -LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-394 |
2.00e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 58 LIFMSFVMFISSLVIYYSEDYMSGESNMnrfIMLVLMFILSMAFLIISPNLISILlgWDGLGLVSYCLV-IYYQNVKSYN 136
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLTKSFLI---CMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 137 AGMLTALTNRIGDVAILISIAWMLNFGG---WNYIYYYDFINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTP 213
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIHGttdYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 214 VSALVHSSTLVTAGVYLLIRFSPMLL---VNNFGWFLLLVGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLmMSILAMG 290
Cdd:MTH00226 263 AGSVLLAGILLKLGGYGLVRLSWPILplgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL-VSITLVT 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 291 YPKV----AFFHLLTHALFKALLFMCAgSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:MTH00226 342 HDIIgltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
330 340
....*....|....*....|....*...
gi 1707765456 367 eLVCLSWmNFLIFFLYFFSTGLTASYSF 394
Cdd:MTH00226 421 -LSSFNW-NPIIGVFVCSGVILSAVYSF 446
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
188-361 |
3.08e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 188 LLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNNFGWF---LLLVGCLTMFMAGLGANF 264
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFaplLIVLGVVNIIYAALTSFA 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 265 EFDLKKIIALSTLSQLGLMM----SILAMGYPKvAFFHLLTHALFKALLFMCAGSM---IHNLKdcqdIRFMGSIVNFMP 337
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGATydrTHTLM----LDEMGGVGQKMR 374
|
170 180
....*....|....*....|....
gi 1707765456 338 LTSVCFNVSSLSLCGLPFLAGFYS 361
Cdd:PRK02546 375 KMFAMWTACSLASLALPGMSGFVA 398
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
188-365 |
6.90e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 39.16 E-value: 6.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 188 LLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNN---FGWFLLLVGCLTMFMAGLGANF 264
Cdd:CHL00011 218 LIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAhsiFSPWLVIVGAIQIIYAASTSLG 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 265 EFDLKKIIALSTLSQLGLMM----SILAMGyPKVAFFHLLTHALFKALLFMCAGSmihnlkDCQDIRF-----MGSIVNF 335
Cdd:CHL00011 298 QRNLKKRIAYSSVSHMGFIIigigSITDTG-LNGAILQIISHGFIGAALFFLAGT------SYDRIRLvyldeMGGIAIP 370
|
170 180 190
....*....|....*....|....*....|
gi 1707765456 336 MPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 365
Cdd:CHL00011 371 MPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
173-429 |
6.91e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.04 E-value: 6.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 173 FINDSWEMRVISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStlvtagvylLIRFSPMLLV--NNFGWFLLLV 250
Cdd:MTH00160 79 MLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMT---------WQKIAPLILLsyLINNNFIIII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 251 GCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMIHNLKDCQDIRFMG 330
Cdd:MTH00160 150 IILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKS 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 331 SIVNFMpltsvcFNVSSLSLCGLPFLAGFYSKDLILELVCLSWMNFLIFFLYFFSTgLTASYSFRLFYYSMSGDNNFFSS 410
Cdd:MTH00160 230 KKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLMLNYNKNKW 302
|
250
....*....|....*....
gi 1707765456 411 FSFDDKGYYFSFGIIIFLI 429
Cdd:MTH00160 303 NLKKKKNKFSLILNFLSFI 321
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
182-409 |
8.08e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.61 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 182 VISLLILLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLVNnfgwFLLLVGCLTMFMAGLG 261
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILP----MMTSMAAMSALAGGLG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765456 262 ANFEFDLKKIIALSTLSQLGlMMSILAMGYPKVAFFHLLTHALFKALLFMCAGSMihnlkDCQDIRFMGSIVNFMPLTSV 341
Cdd:MTH00011 165 GMNQTQLRPLLAYSSIGHMG-WMTMISVFSPSMAILYFMTYIIITTPLMLLFAYL-----NAFSTKFNSKISSMSQTTSM 238
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765456 342 CFNVSSLSLCGLPFLAGFYSKDLILELVcLSWMNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFFS 409
Cdd:MTH00011 239 SLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSS 305
|
|
| |
