|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-343 |
4.98e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 361.01 E-value: 4.98e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 1 MVGVYFYFDFNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVF 80
Cdd:MTH00163 36 MLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 81 FEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSFYFLFYLFIIMAFLIKM 160
Cdd:MTH00163 116 FESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKM 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 161 PMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIA 240
Cdd:MTH00163 196 PMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIA 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 241 YSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNM 320
Cdd:MTH00163 276 YSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNM 355
|
330 340
....*....|....*....|...
gi 1707765471 321 AAPPSLNLLGELGLLNSIISCSF 343
Cdd:MTH00163 356 AAPPSLNLLGEISLINSLISWSK 378
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
12-343 |
8.88e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 311.00 E-value: 8.88e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 12 MISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLL 91
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 92 ILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGS---LFISLFYDFGSFYFLFYLFIIMAFLIKMPMFLFHLW 168
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 169 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMS 248
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 249 MVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPPSLNL 328
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330
....*....|....*
gi 1707765471 329 LGELGLLNSIISCSF 343
Cdd:MTH00150 335 LSEIMIFPSLISYSP 349
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
10-342 |
1.51e-98 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 298.58 E-value: 1.51e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 10 FNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTL 89
Cdd:MTH00014 48 YSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 90 LLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLF-YDFGSFYF--LFYLFIIMAFLIKMPMFLFH 166
Cdd:MTH00014 128 FLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVH 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 167 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAH 246
Cdd:MTH00014 208 LWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGH 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 247 MSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPPSL 326
Cdd:MTH00014 288 MGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSI 367
|
330
....*....|....*.
gi 1707765471 327 NLLGELGLLNSIISCS 342
Cdd:MTH00014 368 NLLSEIMLLTSILSSS 383
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
14-325 |
1.58e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 288.63 E-value: 1.58e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 14 SYFFGVDYFSFSLILLSFWICSLMLTSSSS--VY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLL 91
Cdd:MTH00124 53 TQWLGIDQISAPLLVLSCWLLPLMILASQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLIL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 92 ILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSF------YFLFYLFIIMAFLIKMPMFLF 165
Cdd:MTH00124 133 ITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 166 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVA 245
Cdd:MTH00124 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 246 HMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPPS 325
Cdd:MTH00124 293 HMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPT 372
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-343 |
5.71e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 284.18 E-value: 5.71e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 5 YFYFDFNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGS 84
Cdd:MTH00205 41 NSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 85 ILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSFYFLFYLFII---MAFLIKMP 161
Cdd:MTH00205 121 LIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 162 MFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAY 241
Cdd:MTH00205 201 MYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAY 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 242 SSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMA 321
Cdd:MTH00205 281 SSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMA 360
|
330 340
....*....|....*....|..
gi 1707765471 322 APPSLNLLGELGLLNSIISCSF 343
Cdd:MTH00205 361 APPSLNLASEILLIMSLLSSSK 382
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
9-325 |
6.47e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 281.80 E-value: 6.47e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 9 DFNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*F--INYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSIL 86
Cdd:MTH00068 48 TMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNHLKNepINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 87 PTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSFYF------LFYLFIIMAFLIKM 160
Cdd:MTH00068 128 PTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 161 PMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIA 240
Cdd:MTH00068 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 241 YSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNM 320
Cdd:MTH00068 288 YSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNM 367
|
....*
gi 1707765471 321 AAPPS 325
Cdd:MTH00068 368 ALPPS 372
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
10-343 |
1.36e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 278.40 E-value: 1.36e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 10 FNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSG--LFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILP 87
Cdd:MTH00044 50 WHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 88 TLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFY------DFGSFYFLFYLFIIMAFLIKMP 161
Cdd:MTH00044 130 TLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 162 MFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKF-NYFWVSLSLSGGVIVSLMCFRQVDLKSLIA 240
Cdd:MTH00044 210 IYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 241 YSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNM 320
Cdd:MTH00044 290 YSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANL 369
|
330 340
....*....|....*....|...
gi 1707765471 321 AAPPSLNLLGELGLLNSIISCSF 343
Cdd:MTH00044 370 GLPPLPNLIGELLIISSIISWSI 392
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
10-325 |
3.73e-83 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 259.44 E-value: 3.73e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 10 FNMISYFFgVDYFSFSLILLSFWICSLMLTSSSSVY*--FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILP 87
Cdd:MTH00110 50 LNFSLLFF-SDSLSTPLLILTTWLLPLMLMASQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 88 TLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLF------YDFGSFYFLFYLFIIMAFLIKMP 161
Cdd:MTH00110 129 TLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 162 MFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAY 241
Cdd:MTH00110 209 LYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAY 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 242 SSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMA 321
Cdd:MTH00110 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLA 368
|
....
gi 1707765471 322 APPS 325
Cdd:MTH00110 369 LPPT 372
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
10-343 |
9.40e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 250.24 E-value: 9.40e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 10 FNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*F--INYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILP 87
Cdd:MTH00206 48 WSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNepINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 88 TLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSFYF---LFYLFIIMAFLIKMPMFL 164
Cdd:MTH00206 128 TLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWnnnLWWLACILAFLVKLPLYG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 165 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSV 244
Cdd:MTH00206 208 VHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSV 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 245 AHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPP 324
Cdd:MTH00206 288 SHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
330
....*....|....*....
gi 1707765471 325 SLNLLGELGLLNSIISCSF 343
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSN 386
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
11-324 |
4.73e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 236.01 E-value: 4.73e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 11 NMISYFFGVDYFSFSLILLSFWICSLMLTSSSS--VY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPT 88
Cdd:MTH00127 51 SSLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 89 LLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSL------FISLFYDFGSFYFLFYLFIIMAFLIKMPM 162
Cdd:MTH00127 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 163 FLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYS 242
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 243 SVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAA 322
Cdd:MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLAL 370
|
..
gi 1707765471 323 PP 324
Cdd:MTH00127 371 PP 372
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
13-323 |
1.76e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 185.67 E-value: 1.76e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 13 ISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*fINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLI 92
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEI--KKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 93 LGWGYqPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSL------FISLFYDFGSFYFLFYLFIImAFLIKMPMFLFH 166
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaeLAAAPLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 167 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFR-VMSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVA 245
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765471 246 HMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAP 323
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
13-306 |
1.21e-48 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 170.38 E-value: 1.21e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 13 ISYFFGVDYFSFSLILLSFWICSLMLTSSSSVy*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLI 92
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 93 LGWGYqPERLQAGLYLIFYTLFASLPLLLVLIkvnlvvgSLFISLFYDFGSF---------------YFLFYLFIImAFL 157
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAII-------YLVVVYYNATGTFdiadllnlplppgvqYWLFLAFFI-AFA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 158 IKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVM-SIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLK 236
Cdd:PRK05846 223 VKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSlPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIK 302
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 237 SLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMP 306
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMP 372
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
71-324 |
1.78e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 164.41 E-value: 1.78e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 71 SMNLLMFYVFFEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLF---ISLFYDFGSFY-- 145
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdeLSKALTGGLNSsg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 146 -FLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVI 224
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 225 VSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLS-NIIYERLGSRSMLINKGLIS 303
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260
....*....|....*....|.
gi 1707765471 304 LMPNMTMWWFLLMSSNMAAPP 324
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPP 261
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
16-325 |
7.14e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 167.92 E-value: 7.14e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 16 FFGVDYFS-FSLILLSFWICSLMLTSSSSVY*FINYsglFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLILG 94
Cdd:MTH00217 75 VFAVDGISiFFLILTALLTPICILISWNSIKFLIKE---FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 95 WGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGS----LFISLFYDFGSFYFLFYLFIImAFLIKMPMFLFHLWLP 170
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTtdyqALCCLKIEKELQYFIFLGFFL-SLAIKIPKIPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 171 KAHVEAPISGSMILAGVLLKLGGYGIFRV-MSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMSM 249
Cdd:MTH00217 231 QAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL 310
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765471 250 VIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPPS 325
Cdd:MTH00217 311 VTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLS 386
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-323 |
2.99e-47 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 166.27 E-value: 2.99e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 13 ISYFFGVDYFSFSLILLSfwicSLMLTSS--SSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLL 90
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLT----ALLTLLAilASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 91 LILGWGyQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLF-----ISLFYDFGSFYFLFYLFIImAFLIKMPMFLF 165
Cdd:TIGR01972 145 LIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFdllelLNLPLPFGVQTWLFLAFFI-AFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 166 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSV 244
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765471 245 AHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAP 323
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
8-325 |
6.88e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 157.15 E-value: 6.88e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 8 FDFNMISYFFGVDYFS-FSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLycsFSSMNLLMFYVFFEGSIL 86
Cdd:MTH00204 70 LNFQWGPLVFAVDGVSlFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGV---FSVLDLLLFYILFEGILI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 87 PTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGS------LFISLFYDFGSFYFLFYLFiimAFLIKM 160
Cdd:MTH00204 147 PMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyqilLNIKLPLSIQKWLLVGFFL---SLAVKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 161 PMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLI 239
Cdd:MTH00204 224 PQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 240 AYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSN 319
Cdd:MTH00204 304 AYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
....*.
gi 1707765471 320 MAAPPS 325
Cdd:MTH00204 384 MGFPLS 389
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
17-325 |
2.73e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 153.54 E-value: 2.73e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 17 FGVDYFSFSLILLSFWI--CSLMLTSSSSVY*FINysglFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLILG 94
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 95 WGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGS-----LFISLFYDFGSFYFLFYLFIIMAFLIKMPMFLFHLWL 169
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyltLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 170 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIK-FNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMS 248
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765471 249 MVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPPS 325
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
1-325 |
1.54e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 138.50 E-value: 1.54e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 1 MVGVYFYFDFNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLmimlycsFSSMNLLMFYVF 80
Cdd:MTH00094 18 FFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLF-------FVSSNMLMLYMF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 81 FEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLvvgslFISLFYDFGSFYFLFYLFIIMAFLIKM 160
Cdd:MTH00094 91 FELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF-----FFSLCYFDFFLSWEMFFILSLSFMMKF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 161 PMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLgikFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIA 240
Cdd:MTH00094 166 PVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSKSLAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 241 YSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNM 320
Cdd:MTH00094 243 YSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNS 322
|
....*
gi 1707765471 321 AAPPS 325
Cdd:MTH00094 323 GVPPS 327
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
18-306 |
1.44e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 132.08 E-value: 1.44e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 18 GVDYFSFSLILLSFWICSLMLTSSSSVY*fiNYSGLFVFivvfLMIMLYCS----FSSMNLLMFYVFFEGSILPTLLLIL 93
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYF----LMLVLYSAqigvFLAQDLLLFFLMWELELVPVYLLIS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 94 GWGYQpERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISL----FYDF-GSFYFLFYLFIIMAFLIKMPMFLFHLW 168
Cdd:PRK12561 129 IWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 169 LPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MSIVSFLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHM 247
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHM 287
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765471 248 SMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMP 306
Cdd:PRK12561 288 GFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
17-324 |
3.95e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 113.32 E-value: 3.95e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 17 FGVDYFSFSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLILGWG 96
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 97 YqPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLF------YDFGSFYFLFYLFIImAFLIKMPMFLFHLWLP 170
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAFALLLV-GFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 171 KAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIV--SLMCFRQVDLKSLIAYSSVAHMS 248
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLLTMLvgALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765471 249 MVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPnMTMWWFLLMSSNMAAPP 324
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP-LTAAAFLIGALALAGLP 384
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-322 |
2.81e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.02 E-value: 2.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 13 ISYFFGVDYFSFSLILLSFWICSLMLTSSSSVy*fINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLI 92
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDES---IQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 93 LGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLF-----ISLFYDFGSfYFLFYLFIIMAFLIKMPMFLFHL 167
Cdd:PRK06473 148 AIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyeplRSHTLPLST-QLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 168 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMsiVSFLGIKFNYFWVSLSLSGGVIV---SLMCFRQVDLKSLIAYSSV 244
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFG--VGLFPEAWVYLAPWLATWAVVSVlygASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765471 245 AHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAA 322
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMAS 382
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
9-318 |
6.26e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 107.72 E-value: 6.26e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 9 DFNMISYF-----FGVDYFSFSLILLSFWICSLMLTSSSSVy*fINYSGLFVFivvfLMIMLYC----SFSSMNLLMFYV 79
Cdd:CHL00011 67 DYKWINFFdfhwrLGIDGLSIGPILLTGFITTLATLAAWPV---TRNSRLFYF----LMLAMYSgqigLFSSRDLLLFFI 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 80 FFEGSILPTLLLILGWGYQpERLQAGLYLIFYTLFASLPLLLVLIKVNLVvGSLFISLfyDFG---------SFYFLFYL 150
Cdd:CHL00011 140 MWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLY-GSNEPTL--NFEtlanqsypvALEILFYI 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 151 FIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MSIVSFLGIKFNYFWVSLSLSGGVIVSLMC 229
Cdd:CHL00011 216 GFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 230 FRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNM- 308
Cdd:CHL00011 296 LGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIf 375
|
330
....*....|
gi 1707765471 309 TMWWFLLMSS 318
Cdd:CHL00011 376 TMFSSFSMAS 385
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
18-289 |
1.31e-24 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 104.40 E-value: 1.31e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 18 GVDYFSFSLILLSFWICSLMLTSSSSVY*finYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLILGWGY 97
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPVTF---KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 98 QpERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFY----DFG-SFYFLFYLFIIMAFLIKMPMFLFHLWLPKA 172
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 173 HVEAPISGSMILAGVLLKLGGYGIFRVMsiVSFLGIKFNYFWVSLSLSGGVIV---SLMCFRQVDLKSLIAYSSVAHMSM 249
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMN--AGMLPDAHAQFAPLLIVLGVVNIiyaALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1707765471 250 VIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYER 289
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR 357
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
2-310 |
9.12e-23 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 98.07 E-value: 9.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 2 VGVYFYFDFNMISYFFGVDYFSFSLILLSfwicsLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFF 81
Cdd:MTH00062 26 VGCCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCVNNSLLFWFFY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 82 EGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDFGSFYFLFYLFIIMAFLIKMP 161
Cdd:MTH00062 101 ELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVP 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 162 MFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIkFNYFWVSLSLSGGVIVSlmCFRQVDLKSLIAY 241
Cdd:MTH00062 181 LFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVFFLIT--ACSELDGKRWLAF 257
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765471 242 SSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTM 310
Cdd:MTH00062 258 LSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRV 326
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-322 |
7.50e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 90.16 E-value: 7.50e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 13 ISYFFGVDYFSFSLILLSfwiCSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLI 92
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 93 LGWGYQpERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSlfISLFYDFGS-------FYFLFYLFIIMAFLIKMPMFLF 165
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGS--TSFDYDAIStqnlslnTQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 166 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMsiVSFLGIKFNYFWVSLSLSGGVIV---SLMCFRQVDLKSLIAYS 242
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 243 SVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAA 322
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMAS 382
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
16-306 |
4.97e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.80 E-value: 4.97e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 16 FFGVDYFSFSLILLSFWICSLMLTSSSSVY*FI-----NYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLL 90
Cdd:PRK08668 57 FFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMvsektKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFM 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 91 LILgWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFISLFYDF-----GSFYFLFYLFIIMAFLIKMPMFLF 165
Cdd:PRK08668 137 MVP-MGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLindtsTGFALIVFLFLLAFGVAKAGIFPL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 166 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGI-----------KFNYFWVSLSLSGGVIVSLMCFRQVD 234
Cdd:PRK08668 216 HVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQED 295
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1707765471 235 LKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMP 306
Cdd:PRK08668 296 IKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMP 367
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-324 |
1.19e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 74.62 E-value: 1.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 146 FLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFW-------VSLS 218
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRaalspilIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 219 LSGGVIVSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLIN 298
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170 180
....*....|....*....|....*.
gi 1707765471 299 KGLISLMPNMTMWWFLLMSSNMAAPP 324
Cdd:PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-306 |
1.95e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 73.76 E-value: 1.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 56 FIVVFLMIM--LYCSFSSMNLLMFYVFFEGSILPTLLLIlGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSL 133
Cdd:PRK08375 108 FYALFLLLLagLLGALLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 134 FISLFYD---FGSFYFLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKF 210
Cdd:PRK08375 187 NMADLAGalaENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRF 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 211 --NYFW--VSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNII 286
Cdd:PRK08375 267 alGLGWllAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAI 346
|
250 260
....*....|....*....|
gi 1707765471 287 YERLGSRSMLINKGLISLMP 306
Cdd:PRK08375 347 EVTYGTRRLSELSGLGRRMP 366
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
69-318 |
6.26e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 72.29 E-value: 6.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 69 FSSMNLLMFYVFFEGSILPTLLLIlGWGYQPERLQAGLYLIFYTLFAslpLLLVLIKVNLVvgslfislFYDFGSFYF-- 146
Cdd:PRK07234 111 FVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVA---MLFYLIGAVLV--------YQANGTFAFsg 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 147 ------LFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLS 220
Cdd:PRK07234 179 latadpEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 221 GgvivSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMsmnwWGCFGSLSlmigHGLCSSGLFCLSNIIYERLgsrsmliNKG 300
Cdd:PRK07234 259 G----VLFALLEKDLKRMLAFSTISQLGFILAAPL----VGGLYALA----HGLVKSTLFLCAGALPSRN-------FTE 319
|
250
....*....|....*...
gi 1707765471 301 LISLMPNMTMWWFLLMSS 318
Cdd:PRK07234 320 LISQMLGIGKWIPLTMAS 337
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
151-318 |
6.49e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 72.27 E-value: 6.49e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 151 FIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVS-FLGIKF-NYFWVSLSLSGGVIVSLM 228
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 229 CFRQVDLKSLIAYSSVAHMSMV-----IGGLMsmnwwGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLIS 303
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLK 373
|
170
....*....|....*
gi 1707765471 304 LMPnmTMWWFLLMSS 318
Cdd:PRK06458 374 VSP--LTGWGLMLGA 386
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
56-324 |
2.81e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 70.53 E-value: 2.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 56 FIVVFLMIMLYCSFSSmNLLMFYVFFEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFI 135
Cdd:PRK08667 116 LTALFILSMLGVVASA-NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 136 SLFYDFGSFYFLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWV 215
Cdd:PRK08667 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 216 SLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLM-----------IGHGLCSSGLFCLSN 284
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAG 354
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1707765471 285 IIYERLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPP 324
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPP 394
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
53-292 |
1.88e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 1.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 53 LFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLILGWGYQpERLQAGLYLIFYT------LFASLPLLLVLIKV 126
Cdd:PRK08676 103 VFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIAstamifAFIGLIFLFSLTRQ 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 127 NLVVGSLFISLFYDFGSFY-----FLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMS 201
Cdd:PRK08676 182 ALGTGTLNWTELAAHASLLspsvlGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSA 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 202 IVSFLGIkFNYFWVSLSLSGGVIVSLMCF---RQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSG 278
Cdd:PRK08676 262 LLRQSGA-AEQFSNVLIGLGIFSIAVAAFsmlSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSG 340
|
250
....*....|....
gi 1707765471 279 LFCLSNIIYERLGS 292
Cdd:PRK08676 341 LFFSAGILHRQYRS 354
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-308 |
3.97e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 57.84 E-value: 3.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 54 FVFIVVFLMIMLYCSFSSMNLLMfYVFFEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSL 133
Cdd:PRK12646 113 YFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 134 FIS-------LFYDFGSFYFLFYLFIIMAFlIKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMSIVSf 205
Cdd:PRK12646 192 NITeilgqadHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 206 LGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAH----MSMV-IGGLMSMNWWG---------CFGSLSLMIG 271
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDaiasiyvfvLFAALFHLMN 348
|
250 260 270
....*....|....*....|....*....|....*..
gi 1707765471 272 HGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNM 308
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKM 385
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
150-343 |
5.31e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 5.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 150 LFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIV-----SFLGIKFNYFWVSLSLSGGVI 224
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 225 VSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISL 304
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190
....*....|....*....|....*....|....*....
gi 1707765471 305 MPNMTMWWFLLMSSNMAAPPSLNLLGELGLLNSIISCSF 343
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNA 411
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
71-324 |
3.71e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.89 E-value: 3.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 71 SMNLL-------MFYVFFEGSILPTLLLILGWGYQPERLQAGLyliFYTLFASLPLLLVLIKVNLVVGSlfiSLFYDFGS 143
Cdd:PRK06521 125 SMVLVlladdafSFLVAWETMSLSSWFLVIANHREAEIRRAGF---LYLLMAHAGALAILLAFGLLARE---SGSYDFAA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 144 FY------FLFYLFIIMAFL---IKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmsIVSFLGIKfNYFW 214
Cdd:PRK06521 199 MRaahlspFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAP-GWWW 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 215 --VSLSLSG-----GVIVSLMcfrQVDLKSLIAYSSVAH-----MSMVIGGLMSMNWWGCFGSLSLM------IGHGLCS 276
Cdd:PRK06521 276 gvLVLALGAisavlGVLYALA---EHDLKRLLAYSTIENigiifVGLGLAMVFIAYGMPLLAALALTaalyhlLNHALFK 352
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1707765471 277 SGLFCLSNIIYERLGSRSMLINKGLISLMPnMTMWWFLLMSSNMAAPP 324
Cdd:PRK06521 353 SLLFLGAGAVLHATGTRDMEKLGGLIRRMP-WTAWAFLIGCLAISALP 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-306 |
4.71e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.54 E-value: 4.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 54 FVFIVVFLMIMLYCSFSSmNLLMFYVFFEGSILPTLLLIlgwGYQPERLQA---GLYLIFYTLFASLPLLLVLIKVNLVV 130
Cdd:PRK12647 98 YSYILLFMASMLGLVLSD-NLITLFVFWELTSITSFLLI---GFNHEREAArraALQALLVTGGGGLALLAGLILLGNVT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 131 GSLFISLFYDFG------SFYFLFYLFIIMAFLIKMPMFLFHLWLPKAhVEAPI-------SGSMILAGVLLklggygif 197
Cdd:PRK12647 174 GTYSLSELLASGdvirehPLYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL-------- 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 198 rVMSIVSFLGIKFNYFWvSLSLSGG---VIVSLMCFRQVDLKSLIAYSSVahmsMVIGGLMSMNWWGCFGSLS----LMI 270
Cdd:PRK12647 245 -LARLNPVLGGTPLWQT-ILPLFGGltmLTGALLAVRQTDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLV 318
|
250 260 270
....*....|....*....|....*....|....*.
gi 1707765471 271 GHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMP 306
Cdd:PRK12647 319 AHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMP 354
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-293 |
1.29e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.81 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 24 FSLILLSFWICSLMLTSSSSVY*FINYSGLFVFIVVFLMIMLYCSFSSMNLLMFYVFFEGSILPTLLLIlGWGYQPERLQ 103
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 104 AGLYLIFYTLFASLplLLVLIKVNLVVGSLFISLFYDFGSFYFLFYLFIIMAF---LIKMPMFLFHLWLPKAHVEAPISG 180
Cdd:PRK06589 167 GGYKYLKILMISAL--LLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFiygIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 181 SMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFWVSLSLSGGVIV-----SLMCFRQVDLKSLIAYSSVAHMSMVIGGLM 255
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270
....*....|....*....|....*....|....*...
gi 1707765471 256 SMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSR 293
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKED 362
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-314 |
1.68e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.58 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 55 VFIVVFLMIM--LYCSFSSMNLLMFYVFFEgsILPT---LLLILGwgYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLV 129
Cdd:PRK12665 112 IFLPTYLILVagVSNAFLAGDLFNLYVGFE--ILLVasyVLLTLG--ATAARVRAGVTYVMVSMVSSLLFLIGIALVYAA 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 130 VGSL-FISLFYDFGSF----YFLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVs 204
Cdd:PRK12665 188 TGTLnMADLAVRLDELpsgtRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 205 FLGIKFNYFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSN 284
Cdd:PRK12665 267 FPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG 346
|
250 260 270
....*....|....*....|....*....|
gi 1707765471 285 IIYERLGSRSMLINKGLISLMPNMTMWWFL 314
Cdd:PRK12665 347 LIERQAGSSSLRRLGGLAKASPLLAVLFFV 376
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
54-324 |
3.01e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 48.82 E-value: 3.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 54 FVFIVVFLMIMLYCSFSSmNLLMFYVFFEGSILPTLLLIlGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSL 133
Cdd:PRK06525 116 YAFLLLFIGAMAGLVYSS-TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTF 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 134 FISLFYDF-GSFYFLFYLFIIMAFLIKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMSIVSFLGIKFN 211
Cdd:PRK06525 194 ALSALSGLhGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIG 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 212 YFWVSLSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMS-MVIGGLMSM--NWWGCFGSLSLMIGHGLCSSGLFCLSNIIYE 288
Cdd:PRK06525 273 YVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGyMFFGLSLAIlgSRLALEGSIAYIFNHAFAKSLFFLVAGALSY 352
|
250 260 270
....*....|....*....|....*....|....*.
gi 1707765471 289 RLGSRSMLINKGLISLMPNMTMWWFLLMSSNMAAPP 324
Cdd:PRK06525 353 SCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
73-324 |
5.26e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 48.17 E-value: 5.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 73 NLLMFYVFFEGSILPTLLLILGWGYQPERLQAGL-YLIFYTLFASLPLLLVLIKV----NLVVGSLFISLFYDFGSFYFL 147
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLGIALLYgqygTLNMAYLAVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 148 FYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRVMsivsflgikFNYFWVSLSLS--GGVI 224
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 225 VSL----------MCFRQVDLKSLIAYSSVAHMSMVIGGL------MSMNWWGCFGSLSL------MIGHGLCSSGLFCL 282
Cdd:PRK08376 291 IILgcltmfvgvaMAVVQKDVKRLLAYHSVSQIGYMLLGLgvglaaLGDPAMASYGEIALaggiyhIVNHALYKALLFLT 370
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1707765471 283 SNIIYERLGSRSMLINKGLISLMPnMTMWWFLLMSSNMAAPP 324
Cdd:PRK08376 371 AGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLP 411
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-68 |
1.84e-05 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 43.28 E-value: 1.84e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 1 MVGVYFYFDFNMISYFFGVDYFSFSLILLSFWICSLMLTSSSSVY*F--INYSGLFVFIVVFLMIMLYCS 68
Cdd:pfam01059 41 LLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILASQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
152-306 |
3.24e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.53 E-value: 3.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 152 IIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMSIVSFLGIKFNYFW--VSLSLSGGVIVSLMC 229
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765471 230 FRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMP 306
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP 368
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
152-324 |
1.22e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 152 IIMAFLIKMPMFLFHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMSIvsflgikfnyfWVSLSLSGGVIV 225
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-----------WNWLLIIVGMIT 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 226 SLM----CFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGL 301
Cdd:PRK12650 283 ALMgavfAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSL 362
|
170 180
....*....|....*....|...
gi 1707765471 302 ISLMPnMTMWWFLLMSSNMAAPP 324
Cdd:PRK12650 363 WRRMP-FTFVSVTIAALSMAAVP 384
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
150-280 |
3.13e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.50 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 150 LFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIFRVMSIVSFLGIKF---NYFWVsLSLSGGVIVS 226
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLLRLLVVAFGGLSEdwqQVLAI-IAIASMLVGN 285
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1707765471 227 LMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLF 280
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-257 |
4.87e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.83 E-value: 4.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 54 FVFIVVFLMIMLYCSFSSmNLLMFYVFFEGSILPTLLLILGWgYQPERLQAG-LYLIFYTLFASLPLLLVLIKVNLVVGS 132
Cdd:PRK12645 113 YVYLLLFMGAMLGVVLSD-NLIVLYLFWELTSISSFLLISYW-YEREASRYGaQKSMLITVFGGLSMLGGFILLYIMTGS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 133 LFISLFYDFGSFYFLFYLFIIMAFLI------KMPMFLFHLWLPKAhVEAPI-------SGSMILAGVLLKLGGYGIFRV 199
Cdd:PRK12645 191 FSIREMIANADEIQNSPLFIPAMILIllgaftKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYLVARFTPIFAG 269
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1707765471 200 MS----IVSFLGIkFNYFWVSLSLSggvivslmcfRQVDLKSLIAYSSVAHMSMVigglMSM 257
Cdd:PRK12645 270 SQvwfwTVTLVGL-ITLFWGSLNAV----------KQTDLKGILAFSTVSQLGLI----MSL 316
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-280 |
1.29e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 40.48 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 50 YSGLFVFIVVFLMIMLycsfSSMNLLMFYVFFEGSILPTLLLILGWGYQPERLQAGL-YLIFYTLFASLPLL-LVLI--- 124
Cdd:COG1007 104 FYALLLFATLGMMLMA----SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLyga 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 125 --KVNLVVGSLFISLFYDFGSFYFLFYLFIIMAFLIKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIFRVMSI 202
Cdd:COG1007 180 tgSLNLAGIAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALLRLLV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 203 VSFLGIKFNYFWVSLSLSGGVIV--SLMCFRQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLSLMIGHGLCSSGLF 280
Cdd:COG1007 259 EAFPGLAADWQLLLAVLAVLSMTvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-248 |
1.98e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.20 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 56 FIVVFLMIMLYCSFSSmNLLMFYVFFEGSILPTLLLILGWGYQPERLQAGLYLIFYTLFASLPLLLVLIKVNLVVGSLFI 135
Cdd:PRK12649 116 YLLLFMGSMIGMVFSG-NTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 136 SLFYDFGS---------FYFLFYLFIIMAFLIKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMSIVSf 205
Cdd:PRK12649 195 ATILQDSElienikghpLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS- 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1707765471 206 lGIKFNYFWVS-LSLSGGVIVSLMCFRQVDLKSLIAYSSVAHMS 248
Cdd:PRK12649 273 -GTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
166-324 |
7.37e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.27 E-value: 7.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 166 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmsIVSFLGIKFNYFWVSLSLSGGVIVS----LMCFRQVDLKSLIAY 241
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAfvggLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765471 242 SSVAHMSMVIGGL------MSMNW-----WGCFGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSMLINKGLISLMPNMTM 310
Cdd:PRK08042 276 HTLENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI 355
|
170
....*....|....
gi 1707765471 311 WWFLLMSSNMAAPP 324
Cdd:PRK08042 356 AMLVGLMAMAALPP 369
|
|
| |
