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Conserved domains on  [gi|1707765473|gb|QDP18053|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Poekilocerus bufonius]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.87e-138

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.98  E-value: 3.87e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 246 SLIFFGGDYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.87e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.98  E-value: 3.87e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 246 SLIFFGGDYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 1.16e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.74  E-value: 1.16e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  14 LLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSLMISLFTW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  94 LVFPYLTYM--CSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFDLSF 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 172 FMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMSLIFFG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765473 252 G------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-298 2.09e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.68  E-value: 2.09e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   1 MMLFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  81 SPIFSLMISLFTWLVFPYLTYMC--SFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 159 SLIILIGSFDLSFFMVYQF-YCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765473 238 IIFMSMFMSLIFFGGdYYS-------------LIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.87e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.98  E-value: 3.87e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 246 SLIFFGGDYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
7-309 1.08e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 346.25  E-value: 1.08e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   7 LMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSL 86
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  87 MISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 166
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 167 FDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMS 246
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765473 247 LIFFGGDYY--SLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKI 309
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
7-307 4.52e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 321.82  E-value: 4.52e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   7 LMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  87 MISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 167 FDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMS 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 247 LIFFGGD-----YYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGL 307
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
6-307 2.22e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 299.90  E-value: 2.22e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1707765473 246 SLIFFGGDYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGL 307
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
8-311 8.52e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 296.15  E-value: 8.52e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   8 MFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSLM 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  88 ISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 168 DLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMSL 247
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1707765473 248 IFFGGDY-------YSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00104  241 LFLGAFHnpympelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
6-298 2.43e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 295.27  E-value: 2.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 246 SLIFFGGDY-------YSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:MTH00111  244 TILFLNPSTlnlppelFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
6-311 1.87e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 292.42  E-value: 1.87e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 246 SLIFFGGDyYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
6-312 1.22e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 290.75  E-value: 1.22e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 166 SFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765473 246 SLIFFGGDYY-------SLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILLL 312
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
NADHdh pfam00146
NADH dehydrogenase;
14-303 1.16e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.74  E-value: 1.16e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  14 LLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSLMISLFTW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  94 LVFPYLTYM--CSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFDLSF 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 172 FMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMSLIFFG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765473 252 G------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
2-311 8.98e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 278.41  E-value: 8.98e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   2 MLFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFS 81
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  82 PIFSLMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 161
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 162 ILIGSFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 241
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765473 242 SMFMSLIFFGGDYY-------SLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
5-311 5.40e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 276.47  E-value: 5.40e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   5 DLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIF 84
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  85 SLMISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 164
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 165 GSFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMF 244
Cdd:MTH00040  162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765473 245 MSLIFFGGDYY--------SLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILL 311
Cdd:MTH00040  242 SVILFLGGGSPfneifpinIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
9-312 9.03e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.80  E-value: 9.03e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   9 FILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSLMI 88
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  89 SLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFD 168
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 169 LSfFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMSLI 248
Cdd:MTH00010  165 FS-KIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765473 249 FFGGDYYSLI----FYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKILLL 312
Cdd:MTH00010  244 FTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-298 2.09e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.68  E-value: 2.09e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   1 MMLFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  81 SPIFSLMISLFTWLVFPYLTYMC--SFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 159 SLIILIGSFDLSFFMVYQF-YCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765473 238 IIFMSMFMSLIFFGGdYYS-------------LIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
6-309 1.16e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 255.04  E-value: 1.16e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLT--YMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 163
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 164 IGSFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSM 243
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765473 244 FMSLIFFGG----------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKI 309
Cdd:MTH00054  241 FGVILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-298 1.74e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 252.04  E-value: 1.74e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   6 LLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFS 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  86 LMISLFTWLVFPYLTY--MCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 164 IGSFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSM 243
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765473 244 FMSLIFFGG----------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
2-307 4.76e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 246.19  E-value: 4.76e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   2 MLFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  82 PIFSLMISLFTWLVFPYL--TYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 160 LIILIGSFDLSFFMVYQF-YCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSI 238
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765473 239 IFMSMFMSLIFFGG--------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGL 307
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
1-309 1.18e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 209.87  E-value: 1.18e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   1 MMLFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  81 SPIFSLMISLFTWLVFPYL--TYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:MTH00029   81 APIISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 159 SLIILIGSFDLSFFMVYQFYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 239 IFMSMFMSLIFFGG-----------------------DYYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLP 295
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320
                         330
                  ....*....|....
gi 1707765473 296 LSLNFLFFFCGLKI 309
Cdd:MTH00029  321 LSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
12-309 5.58e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 198.20  E-value: 5.58e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  12 NFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSLMISLF 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  92 TWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFDLSF 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 172 FMVYQFYcwFMFLCFPLMIscfssfLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFMSLIFFg 251
Cdd:MTH00090  161 SFSLSLF--VIYLPFLIMI------IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765473 252 gDYYSLIFYIKLSFISFcfvwVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFFCGLKI 309
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
7-304 1.07e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.93  E-value: 1.07e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   7 LMFILNFLLLVIFVLIsVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSPIFSL 86
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  87 MISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 166
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 167 FDLSFFMvyqFYCWFMFLCFPLMISCFS-SFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMFM 245
Cdd:MTH00058  161 YSLVDFY---YSGWLSVLLFPLIYILWLvCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765473 246 SLIFFGGDYYSLIFYIKLSFisfcFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFF 304
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
3-312 1.76e-28

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 112.74  E-value: 1.76e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   3 LFDLLMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPNKVGFMGIFQPFSDALKLITKEQAIPFVSNYLLYYFSP 82
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  83 IFSLMISLFTWLVFP--YLTYMCSFTYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 160
Cdd:CHL00032  103 SIAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 161 IILIGSfdLSFFMVYQFYCWFMFLCFPL------MISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSE 234
Cdd:CHL00032  183 SLLSNS--LSTVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 235 YTSIIFMSMFMSLIFFGGDYYSL----------------IFYIKLSFI-----SFCFVWV----RGTLPRFRYDKLMYLA 289
Cdd:CHL00032  261 YLNLLVSSLFVTVLYLGGWNLSIpyifipelfeinktggVFGTTIGIFitlakTYLFLFIsittRWTLPRLRMDQLLNLG 340
                         330       340
                  ....*....|....*....|...
gi 1707765473 290 WKSFLPLSLNFLFFFCGLKILLL 312
Cdd:CHL00032  341 WKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-304 8.50e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.72  E-value: 8.50e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473   7 LMFILNFLLLVIFVLISVAFLTLFERKLLGYIHIRKGPnkvgfmGIFQPFSDALKLITKEQAIPfVSNYLLYYFSPIFSL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473  87 MISLFTWLVFPYLTYMCSFTYGFLFFLCCTSFGVYTV--MIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 164
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFflALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765473 165 GSFDLSFFMVYQ---FYCWFMFLCFPLMISCFSSFLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 241
Cdd:COG0650   154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765473 242 SMFMSLIFFGGD------YYSLIFYIKLSFISFCFVWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLFFF 304
Cdd:COG0650   234 LSLFVNLFLPWGialtllLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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