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Conserved domains on  [gi|1707765519|gb|QDP18095|]
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ATP synthase F0 subunit 6 (mitochondrion) [Dictyophorus spumans]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.47e-76

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 230.05  E-value: 1.47e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSvL*******************************NNMNLSLHNEFKTLLGtKSFNGSTLMLISLFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  81 MMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 161 RLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSETY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.47e-76

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 230.05  E-value: 1.47e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSvL*******************************NNMNLSLHNEFKTLLGtKSFNGSTLMLISLFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  81 MMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 161 RLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSETY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 6.20e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 136.76  E-value: 6.20e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  67 FNGSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765519 147 ETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 53-223 4.43e-38

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 131.94  E-value: 4.43e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  53 SLHNEFKTLLGTKSFNgSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVP 132
Cdd:TIGR01131  54 FVLSIVKSQIGGKKGK-FFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVP 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 133 QGTPPMLMSFMVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPML-NFNSMTILIIGQMMLLTLESAVTVIQAY 211
Cdd:TIGR01131 133 SGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAY 212

                         170
                  ....*....|..
gi 1707765519 212 VFSILSTLYSSE 223
Cdd:TIGR01131 213 VFTLLTCLYLND 224
ATP-synt_A pfam00119
ATP synthase A chain;
54-222 8.57e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 8.57e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  54 LHNEFKTLLGTKSFNGSTLMLISLFIMMMFNNSMGLF---PYIFTSTSHMVFTFSIALPMWMSFMLFG-WINNTKNMLIH 129
Cdd:pfam00119  41 VDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKK 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 130 LVPQGTPPMLMSFMVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMT---ILIIGQMMLLTLESAVT 206
Cdd:pfam00119 121 LFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLlgvIPPLLGVAWTLFELLVA 200

                         170
                  ....*....|....*.
gi 1707765519 207 VIQAYVFSILSTLYSS 222
Cdd:pfam00119 201 FIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 8.53e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.58  E-value: 8.53e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  73 MLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFG-WINNTKNMLIHLVPQGTPPMlMSFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765519 152 IIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLltLESAVTVIQAYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.47e-76

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 230.05  E-value: 1.47e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSvL*******************************NNMNLSLHNEFKTLLGtKSFNGSTLMLISLFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  81 MMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 161 RLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSETY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 6.20e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 136.76  E-value: 6.20e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  67 FNGSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765519 147 ETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 8.62e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 139.01  E-value: 8.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSVL*******-************************NNMNLSLHNEFKTLLGTKSFNGSTLMLISLFI 79
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIFSMISLSwITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  80 MMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLS 159
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765519 160 IRLAANMIAGHLLLTLMGNTGP---MLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSETY 225
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWgllPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 53-223 4.43e-38

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 131.94  E-value: 4.43e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  53 SLHNEFKTLLGTKSFNgSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVP 132
Cdd:TIGR01131  54 FVLSIVKSQIGGKKGK-FFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVP 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 133 QGTPPMLMSFMVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPML-NFNSMTILIIGQMMLLTLESAVTVIQAY 211
Cdd:TIGR01131 133 SGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAY 212

                         170
                  ....*....|..
gi 1707765519 212 VFSILSTLYSSE 223
Cdd:TIGR01131 213 VFTLLTCLYLND 224
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 71-223 1.04e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 130.86  E-value: 1.04e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  71 TLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETIS 150
Cdd:MTH00035   73 AGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLS 152

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 151 NIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSM--TILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00035  153 LFAQPIALGLRLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 6.89e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 118.68  E-value: 6.89e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSVL************************----*******NNMNLSLHNEFKTLLGTkSFNGSTLMLIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSSTAFWAFNFSIILLLSSSFwitpNRLSSIMSPPKSTMHTQLSRTFGK-HLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  77 LFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 157 TLSIRLAANMIAGHLLLTLMGNTGPMLNFNS---MTILIIGQMMLLTLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSissTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 58-224 1.29e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 115.35  E-value: 1.29e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  58 FKTLLGTKSFNGSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPP 137
Cdd:MTH00173   59 QVTRSSGLNLGGFSLLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPA 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 138 MLMSFMVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMT----ILIIGQMMLLTLESAVTVIQAYVF 213
Cdd:MTH00173  139 GLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIF 218

                         170
                  ....*....|.
gi 1707765519 214 SILSTLYSSET 224
Cdd:MTH00173  219 TLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 7.70e-30

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 110.43  E-value: 7.70e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  71 TLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETIS 150
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1707765519 151 NIIRPGTLSIRLAANMIAGHLLLTLMGN-TGPMLNFNSMTILI--IGQMMLLTLESAVTVIQAYVFSILSTLY 220
Cdd:MTH00101  149 LFIQPMALAVRLTANITAGHLLIHLIGGaTLALMSISTTTALItfIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 71-223 1.60e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 107.22  E-value: 1.60e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  71 TLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETIS 150
Cdd:MTH00120   70 ALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETIS 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 151 NIIRPGTLSIRLAANMIAGHLLLTLMG-------NTGPMLNFNSMTILiigqMMLLTLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00120  150 LLIRPLALGVRLTANLTAGHLLIQLIStatlnllPTMPTLSLLTLIIL----LLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-223 5.19e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 105.73  E-value: 5.19e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  72 LMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISN 151
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 152 IIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLL---TLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 2.55e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 103.87  E-value: 2.55e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519   1 MMTNLFSTFYPSTSVL*******************************NNMNLSLHNEFKTLLGTKSFNGSTLMLiSLFIM 80
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFL-SLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  81 MMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLSI 160
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765519 161 RLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQ---MMLLTLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00179  160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 74-225 6.55e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 100.85  E-value: 6.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  74 LISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNII 153
Cdd:MTH00175   86 ILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLI 165

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765519 154 RPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLLT----LESAVTVIQAYVFSILSTLYSSETY 225
Cdd:MTH00175  166 RAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIYLGDTI 241
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 72-223 9.77e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 99.66  E-value: 9.77e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  72 LMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISN 151
Cdd:MTH00073   71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765519 152 IIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLL---TLESAVTVIQAYVFSILSTLYSSE 223
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 72-224 3.83e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 95.88  E-value: 3.83e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  72 LMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISN 151
Cdd:MTH00172   73 PFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSY 152

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765519 152 IIRPGTLSIRLAANMIAGHLLLTLMGNTG-PMLNFNSM-TILIIGQMMLLT-LESAVTVIQAYVFSILSTLYSSET 224
Cdd:MTH00172  153 ISRAISLGVRLAANLSAGHLLFAILAGFGfNMLCASGFlSLFPLLIMVFITlLEIAVAVIQAYVFCLLTTIYLADT 228
ATP-synt_A pfam00119
ATP synthase A chain;
54-222 8.57e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 8.57e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  54 LHNEFKTLLGTKSFNGSTLMLISLFIMMMFNNSMGLF---PYIFTSTSHMVFTFSIALPMWMSFMLFG-WINNTKNMLIH 129
Cdd:pfam00119  41 VDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKK 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 130 LVPQGTPPMLMSFMVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMT---ILIIGQMMLLTLESAVT 206
Cdd:pfam00119 121 LFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLlgvIPPLLGVAWTLFELLVA 200

                         170
                  ....*....|....*.
gi 1707765519 207 VIQAYVFSILSTLYSS 222
Cdd:pfam00119 201 FIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 8.53e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.58  E-value: 8.53e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  73 MLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFG-WINNTKNMLIHLVPQGTPPMlMSFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765519 152 IIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGQMMLltLESAVTVIQAYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 74-224 9.35e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 76.52  E-value: 9.35e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  74 LISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNII 153
Cdd:MTH00174   94 VLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYIS 173

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765519 154 RPGTLSIRLAANMIAGHLLLTL-------MGNTGPML-NFNSMTILIigqmMLLTLESAVTVIQAYVFSILSTLYSSET 224
Cdd:MTH00174  174 RAISLGVRLAANISSGHLLFSIiasfawkMINTGILIgSFVPFAILI----FVTILEMAVAIIQAYVFTLLTIVYLRDT 248
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 2.94e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 74.45  E-value: 2.94e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  73 MLISLFIMMMFNNSMGLFP-YIFTSTSHMVFTFSIALPMWMSFMLFG-WINNTKNMLIHLVPQGTPpmlmsFMVMIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 151 NIIRPGTLSIRLAANMIAGHLLLTLMGNTGPMLNFNSMTILIIGqMMLLTLESAVTVIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-220 2.20e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 56.29  E-value: 2.20e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  74 LISLFIMMMFNNSMGLFPYIFTSTSHM-------VFTFSIAlpMWMSFMLFGwinnTKNMLIHLVpQGTPPMLMSFMVMI 146
Cdd:PRK13419  174 LLTVFFFILVCNLLGLVPYGATATGNInvtltlaVFTFFIT--QYAAIKAHG----IKGYLAHLT-GGTHWSLWIIMIPI 246

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 147 ETISNIIRPGTLSIRLAANMIAGHL-LLTLMGntgpmLNFNSMTILIIGQM------MLLTLESAVTVIQAYVFSILSTL 219
Cdd:PRK13419  247 EFIGLFTKPFALTVRLFANMTAGHIvILSLIF-----ISFILKSYIVAVAVsvpfaiFIYLLELFVAFLQAYIFTMLSAL 321


                  .
gi 1707765519 220 Y 220
Cdd:PRK13419  322 F 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 2.58e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 50.27  E-value: 2.58e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  95 TSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETI-SNIIRPGTLSIRLAANMIAGH-LL 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1707765519 173 LTLMGNTGPMLNFNSMTILIIGQMMLLTLESAVTVIQAYVFSILSTLY 220
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 64-223 7.06e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 44.97  E-value: 7.06e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  64 TKSFNGSTLMLISLFIMMMFNNSMGLFPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKnmLIHLVPQGTPPMLMSF- 142
Cdd:MTH00087   45 SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFs 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519 143 MVMIETISNIIRPGTLSIRLAANMIAGHLLLTLMGNTGpmlnFNSMTILIIGQMMlltlESAVTVIQAYVFSILSTLYSS 222
Cdd:MTH00087  123 MLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLG----EKYVWLSILAIMM----ECFVAFIQSYIFSRLIYLYLN 194


                  .
gi 1707765519 223 E 223
Cdd:MTH00087  195 E 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 90-169 4.19e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 42.56  E-value: 4.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765519  90 FPYIFTSTSHMVFTFSIALPMWMSFMLFGWINNTKNMLIHLVPQGTPPMLMSFMVMIETISNIIRPGTLSIRLAANMIAG 169
Cdd:MTH00050   42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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