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Conserved domains on  [gi|1752257992|gb|QEV84059|]
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TKPTDGNGP_150 polyepitopic protein [Cloning vector pAMP1_HisA_HBVep_150opt]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
265-785 2.96e-13

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  265 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 332
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  333 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 412
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  413 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 492
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  493 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 572
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  573 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 650
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  651 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 729
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  730 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 785
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 super family cl33720
large tegument protein UL36; Provisional
589-1109 2.96e-13

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  589 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 656
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  657 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 736
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  737 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 816
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  817 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 896
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  897 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 974
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  975 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 1053
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992 1054 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1109
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 super family cl33720
large tegument protein UL36; Provisional
16-461 7.47e-11

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 67.27  E-value: 7.47e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   16 DGNGPTKPTDGNGPTKPTDGNGPT-----KPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDG-NGPTKPTDGNGPTKPTDG 89
Cdd:PHA03247  2547 DAGDPPPPLPPAAPPAAPDRSVPPprpapRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDpRGPAPPSPLPPDTHAPDP 2626
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   90 NGPTKPTDGNGPTKPTDGNGPTKPTDGNGP-----------TKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 158
Cdd:PHA03247  2627 PPPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvsrprraRRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPP 2706
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  159 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTK 238
Cdd:PHA03247  2707 TPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRL 2783
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  239 PTDGNGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNG 316
Cdd:PHA03247  2784 TRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV 2862
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  317 PTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDG 395
Cdd:PHA03247  2863 RRRPPSRSPAAKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRP 2939
                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  396 NGPTKPTDGngpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 461
Cdd:PHA03247  2940 QPPLAPTTD---PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 super family cl33720
large tegument protein UL36; Provisional
913-1355 1.84e-10

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.12  E-value: 1.84e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  913 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 980
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  981 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 1060
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1061 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1140
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1141 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 1220
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1221 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1298
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1752257992 1299 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1355
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
265-785 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  265 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 332
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  333 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 412
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  413 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 492
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  493 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 572
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  573 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 650
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  651 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 729
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  730 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 785
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
589-1109 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  589 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 656
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  657 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 736
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  737 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 816
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  817 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 896
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  897 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 974
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  975 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 1053
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992 1054 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1109
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
16-461 7.47e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 67.27  E-value: 7.47e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   16 DGNGPTKPTDGNGPTKPTDGNGPT-----KPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDG-NGPTKPTDGNGPTKPTDG 89
Cdd:PHA03247  2547 DAGDPPPPLPPAAPPAAPDRSVPPprpapRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDpRGPAPPSPLPPDTHAPDP 2626
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   90 NGPTKPTDGNGPTKPTDGNGPTKPTDGNGP-----------TKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 158
Cdd:PHA03247  2627 PPPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvsrprraRRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPP 2706
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  159 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTK 238
Cdd:PHA03247  2707 TPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRL 2783
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  239 PTDGNGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNG 316
Cdd:PHA03247  2784 TRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV 2862
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  317 PTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDG 395
Cdd:PHA03247  2863 RRRPPSRSPAAKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRP 2939
                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  396 NGPTKPTDGngpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 461
Cdd:PHA03247  2940 QPPLAPTTD---PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
913-1355 1.84e-10

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.12  E-value: 1.84e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  913 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 980
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  981 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 1060
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1061 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1140
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1141 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 1220
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1221 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1298
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1752257992 1299 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1355
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
683-797 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  683 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 754
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  755 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 797
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
791-905 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  791 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 862
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  863 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 905
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1061-1175 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1061 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1132
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1133 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1175
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
35-149 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   35 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 106
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  107 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 149
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
265-785 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  265 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 332
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  333 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 412
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  413 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 492
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  493 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 572
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  573 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 650
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  651 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 729
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  730 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 785
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
427-947 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  427 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 494
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  495 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 574
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  575 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 654
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  655 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 734
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  735 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 812
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  813 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 891
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  892 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 947
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
589-1109 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  589 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 656
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  657 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 736
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  737 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 816
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  817 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 896
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  897 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 974
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  975 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 1053
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992 1054 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1109
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
751-1271 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  751 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 818
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  819 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 898
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  899 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 978
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  979 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 1058
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1059 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1136
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1137 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 1215
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992 1216 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1271
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
103-623 2.96e-13

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 75.36  E-value: 2.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  103 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 170
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  171 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 250
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  251 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 330
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  331 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 410
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  411 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 488
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  489 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGn 567
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD- 2948
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  568 gpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 623
Cdd:PHA03247  2949 --PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
16-461 7.47e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 67.27  E-value: 7.47e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   16 DGNGPTKPTDGNGPTKPTDGNGPT-----KPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDG-NGPTKPTDGNGPTKPTDG 89
Cdd:PHA03247  2547 DAGDPPPPLPPAAPPAAPDRSVPPprpapRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDpRGPAPPSPLPPDTHAPDP 2626
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   90 NGPTKPTDGNGPTKPTDGNGPTKPTDGNGP-----------TKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 158
Cdd:PHA03247  2627 PPPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvsrprraRRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPP 2706
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  159 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTK 238
Cdd:PHA03247  2707 TPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRL 2783
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  239 PTDGNGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNG 316
Cdd:PHA03247  2784 TRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV 2862
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  317 PTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDG 395
Cdd:PHA03247  2863 RRRPPSRSPAAKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRP 2939
                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1752257992  396 NGPTKPTDGngpTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 461
Cdd:PHA03247  2940 QPPLAPTTD---PAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
11-434 9.87e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.89  E-value: 9.87e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   11 PTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPtDGNGPTKPTDGNGPTKPTDGNGPTKPTDGngPTKPTDGNGPTKPTDGN 90
Cdd:PHA03247  2589 PDAPPQSARPRAPVDDRGDPRGPAPPSPLPP-DTHAPDPPPPSPSPAANEPDPHPPPTVPP--PERPRDDPAPGRVSRPR 2665
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   91 GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDG 170
Cdd:PHA03247  2666 RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP 2745
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  171 NGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTD 250
Cdd:PHA03247  2746 AGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPA 2821
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  251 GN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTK 328
Cdd:PHA03247  2822 ASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA---APARPPVRRLARPAVSRSTESF 2898
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  329 PTDGNGPTKPTDGNGPTKPTD-GNGPTKPTDGNGPTKPTDGNGPTKPTDGngpTKPTDGNGPTKPTDGNGPTKPTDGNGP 407
Cdd:PHA03247  2899 ALPPDQPERPPQPQAPPPPQPqPQPPPPPQPQPPPPPPPRPQPPLAPTTD---PAGAGEPSGAVPQPWLGALVPGRVAVP 2975
                          410       420
                   ....*....|....*....|....*..
gi 1752257992  408 TKPTDGNGPTKPTDGNGPTKPTDGNGP 434
Cdd:PHA03247  2976 RFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
913-1355 1.84e-10

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.12  E-value: 1.84e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  913 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 980
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  981 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 1060
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1061 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1140
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1141 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 1220
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1221 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1298
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1752257992 1299 TKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1355
Cdd:PHA03247  2873 AKPA---APARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
PHA03247 PHA03247
large tegument protein UL36; Provisional
967-1362 5.78e-10

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 64.57  E-value: 5.78e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  967 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 1034
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1035 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 1114
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1115 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1194
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1195 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKP 1274
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA---PPAAPAAGPPRRLTRPAVASLSE 2793
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1275 TDGNGPTkPTDGNGPTKPTDGNGPTKPTDGN--GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1352
Cdd:PHA03247  2794 SRESLPS-PWDPADPPAAVLAPAAALPPAASpaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
                          410
                   ....*....|
gi 1752257992 1353 TKPTDGNGPR 1362
Cdd:PHA03247  2873 AKPAAPARPP 2882
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
785-1073 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  785 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 863
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  864 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 942
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  943 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1022
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992 1023 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1073
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
1073-1361 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1073 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 1151
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1152 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1230
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1231 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1310
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992 1311 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1361
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
929-1217 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  929 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 1007
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1008 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1086
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1087 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 1166
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992 1167 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 1217
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
641-929 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  641 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 719
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  720 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 798
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  799 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 878
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992  879 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 929
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
353-641 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  353 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 431
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  432 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 510
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  511 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 590
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992  591 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 641
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
497-785 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  497 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 575
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  576 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 654
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  655 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 734
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992  735 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 785
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
209-497 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  209 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 287
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  288 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 366
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  367 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 446
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992  447 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 497
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
65-353 2.42e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.92  E-value: 2.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   65 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 143
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  144 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTdgnGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 222
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK---SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPS 643
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  223 DgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKP 302
Cdd:PTZ00449   644 S---PERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRP 720
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1752257992  303 TDgngPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGP 353
Cdd:PTZ00449   721 LP---PKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTP 768
PHA03247 PHA03247
large tegument protein UL36; Provisional
1066-1364 3.58e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.78  E-value: 3.58e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1066 KPTDGNGPTKPTDGNGPtkptDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTK------------PTDGNGPTKPTDG 1133
Cdd:PHA03247  2482 RPAEARFPFAAGAAPDP----GGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1134 NGPTKPTDGNGPTkPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTD 1213
Cdd:PHA03247  2558 AAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1214 GNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1293
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV 2716
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752257992 1294 DGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPRRA 1364
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPA 2787
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
1190-1365 1.17e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.52  E-value: 1.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1190 PTKPTDGNGPTKPTDGNGPTkptdGNGPTKPTDGNGPTKPT-DGNGPTKPTDGNGPTKPTDGNGPTKPtdgnGPTKPtdg 1268
Cdd:PTZ00449   498 PIEEEDSDKHDEPPEGPEAS----GLPPKAPGDKEGEEGEHeDSKESDEPKEGGKPGETKEGEVGKKP----GPAKE--- 566
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1269 NGPTK-PTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPT 1347
Cdd:PTZ00449   567 HKPSKiPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPE 646
                          170
                   ....*....|....*...
gi 1752257992 1348 DGNGPTKPTDGNGPRRAK 1365
Cdd:PTZ00449   647 RPEGPKIIKSPKPPKSPK 664
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
683-797 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  683 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 754
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  755 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 797
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
791-905 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  791 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 862
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  863 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 905
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
845-959 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  845 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 916
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  917 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 959
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
899-1013 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  899 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 970
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  971 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1013
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
953-1067 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  953 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1024
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1025 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1067
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1007-1121 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1007 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1078
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1079 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1121
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1061-1175 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1061 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1132
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1133 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1175
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1115-1229 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1115 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1186
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1187 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1229
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1169-1283 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1169 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1240
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1241 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1283
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
1223-1337 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1223 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 1294
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1295 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 1337
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
737-851 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  737 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 808
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  809 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 851
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
575-689 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  575 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 646
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  647 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 689
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
629-743 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  629 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 700
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  701 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 743
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
35-149 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   35 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 106
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  107 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 149
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
89-203 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   89 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 160
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  161 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 203
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
143-257 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  143 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 214
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  215 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 257
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
197-311 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  197 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 268
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  269 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 311
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
251-365 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  251 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 322
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  323 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 365
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
305-419 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  305 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 376
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  377 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 419
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
359-473 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  359 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 430
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  431 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 473
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
413-527 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  413 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 484
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  485 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 527
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
467-581 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  467 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 538
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  539 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 581
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
Herpes_LMP1 pfam05297
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ...
521-635 2.68e-03

Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys


Pssm-ID: 283060  Cd Length: 386  Bit Score: 41.94  E-value: 2.68e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  521 GNGPTKPTDGNGPTKPTDGNGPTKP--TDGNGPTKP--TDGNGPTKPTdgngPTKP--TDGNGPTKP--TDGNGPTKPTD 592
Cdd:pfam05297  232 GDGPPLCSQNLGAPGGGPDNGPQDPdnTDDNGPQDPdnTDDNGPHDPL----PQDPdnTDDNGPQDPdnTADNGPHDPLP 307
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1752257992  593 GNGPTKPTDGNGPTKPTD-------GNGPTKPTDGNGPTKPTDGNGPTKP 635
Cdd:pfam05297  308 HNPSDSAGNDGGPPNLTEevenkggDQGPPLMTDGGGGHSHDSGHGGGDP 357
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
1205-1326 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1205 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1283
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1284 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1326
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
1151-1272 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1151 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1229
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1230 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1272
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
1097-1218 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1097 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1175
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1176 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1218
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
1043-1164 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992 1043 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1121
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1122 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1164
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
989-1110 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  989 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1067
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1068 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1110
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
935-1056 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  935 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 1013
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992 1014 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1056
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
881-1002 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  881 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 959
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  960 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 1002
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
827-948 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  827 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 905
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  906 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 948
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
773-894 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  773 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 851
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  852 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 894
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
719-840 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  719 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 797
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  798 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 840
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
665-786 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  665 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 743
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  744 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 786
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
611-732 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  611 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 689
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  690 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 732
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
557-678 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  557 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 635
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  636 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 678
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
503-624 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  503 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 581
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  582 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 624
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
449-570 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  449 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 527
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  528 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 570
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
395-516 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  395 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 473
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  474 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 516
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
341-462 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  341 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 419
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  420 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 462
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
287-408 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  287 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 365
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  366 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 408
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
233-354 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  233 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 311
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  312 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 354
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
179-300 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  179 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 257
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  258 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 300
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
125-246 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992  125 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 203
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  204 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 246
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
71-192 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   71 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 149
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992  150 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 192
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
17-138 5.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.20  E-value: 5.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752257992   17 GNGPTKPTDGNGPTKPTDGNGPTKPTDGN-GPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGnGPTKP 95
Cdd:PRK14959   374 SGGGASAPSGSAAEGPASGGAATIPTPGTqGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSG-IPPRP 452
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1752257992   96 TDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPTKPTDGNGPT 138
Cdd:PRK14959   453 APRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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