doublesex- and mab-3-related transcription factor 1 isoform DN5750_c5_g2_i3, partial [Xenopus wittei]
DM domain-containing protein( domain architecture ID 2554)
DM (doublesex- and mab-3) domain-containing protein may dimerize and bind palindromic DNA; similar to Danio rerio doublesex- and mab-3-related transcription factor 3b
List of domain hits
Name | Accession | Description | Interval | E-value | ||
DM super family | cl02557 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
20-48 | 4.24e-09 | ||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. The actual alignment was detected with superfamily member pfam00751: Pssm-ID: 470614 Cd Length: 47 Bit Score: 46.12 E-value: 4.24e-09
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Name | Accession | Description | Interval | E-value | ||
DM | pfam00751 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
20-48 | 4.24e-09 | ||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. Pssm-ID: 459924 Cd Length: 47 Bit Score: 46.12 E-value: 4.24e-09
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DM | smart00301 | Doublesex DNA-binding motif; |
20-49 | 2.17e-04 | ||
Doublesex DNA-binding motif; Pssm-ID: 214606 Cd Length: 54 Bit Score: 34.26 E-value: 2.17e-04
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Name | Accession | Description | Interval | E-value | ||
DM | pfam00751 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
20-48 | 4.24e-09 | ||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. Pssm-ID: 459924 Cd Length: 47 Bit Score: 46.12 E-value: 4.24e-09
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DM | smart00301 | Doublesex DNA-binding motif; |
20-49 | 2.17e-04 | ||
Doublesex DNA-binding motif; Pssm-ID: 214606 Cd Length: 54 Bit Score: 34.26 E-value: 2.17e-04
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Blast search parameters | ||||
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