|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 674.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 1 MCSLSFFILFLFSTLFLLLGIYYLMFDYSLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 81 NIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 161 SWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNF 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 241 GWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 321 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 401 DNNYCSSYMFNDNNYFISFSMIGLLIVAVLGGSLLSWLIFPIPYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYSSGLF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 481 SLSFFSFVSFAGSMWFMPFLSTNYISYLPLNYGYYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 1811917341 561 LWMFILFMLFF 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
1.39e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 485.50 E-value: 1.39e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 1 MCSLSFFILFLFSTLFLLLGIYYLMFDYSLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEK 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 81 NIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 161 SWNYIYYYDFisdsFEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYN- 239
Cdd:MTH00151 163 HWSILSMWDF----KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSg 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 240 FGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLND 319
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 320 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMF 399
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 400 GDNNYCSSYMFNDNNYFISFSMIGLLIVAVLGGSLLSWLIFPIPYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYssgl 479
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGF---- 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 480 FSLSFFSFVSFAGSMWFMPFLSTNYISYLPLNYGYYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTF 559
Cdd:MTH00151 475 SSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLI 554
|
570
....*....|.
gi 1811917341 560 ILWMFILFMLF 570
Cdd:MTH00151 555 LLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
21-570 |
4.85e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 484.15 E-value: 4.85e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 21 IYYLMFDYSLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLI 100
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNyIYYYDFISDSfeMSVI 180
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL--GSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 181 TVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLY-LYNFGWYLLLIGCMTMFMAGLGA 259
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFsSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 260 NYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVC 339
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 340 FNVSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISF 419
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 420 SMIGLLIVAVLGGSLLSWLIFPIPYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYssglFSLSFFSFVSFAGSMWFMPF 499
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917341 500 LSTNYISYLPLNYGYYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFILWMFILFMLF 570
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
21-568 |
1.19e-158 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 465.39 E-value: 1.19e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 21 IYYLMFDYSLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLI 100
Cdd:MTH00207 26 LYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLI 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNYIYYYDfisdSFEMSVI 180
Cdd:MTH00207 106 FFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQ----TDMNNYI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 181 TVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLY-LYNFGWYLLLIGCMTMFMAGLGA 259
Cdd:MTH00207 182 ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSsTYWFNPALLLTASLTMLMAGLSA 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 260 NYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVC 339
Cdd:MTH00207 262 MTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSC 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 340 FNVSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGdNNYCSSYMF-NDNNYFIS 418
Cdd:MTH00207 342 LLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWS-PNSSSPYHHlEDEDKSLT 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 419 FSMIGLLIVAVLGGSLLSWLIFPIPYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYSSGLFSLSFFSFVSFAGSMWFMP 498
Cdd:MTH00207 421 TPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFLV 500
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917341 499 FLSTNYISYLPLNYGYYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYL-LTFILWMFILFM 568
Cdd:MTH00207 501 PLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLmMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
29-573 |
2.79e-119 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 365.04 E-value: 2.79e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 29 SLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISI 108
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTAL-SNRIGDVCILISISWML-NFGSWNYIYYYDFisdSFEMSVITVLIVI 186
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 187 ASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LYLYNFGWYLLLIGCMTMFMAGLGANYEFDL 265
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 266 SKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 346 SLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLL 425
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 426 IVAVLGGSLLSWLIFPIPYVIV-LPWYLSFLTLLFIIFGSYFGyiisdLNYSSGLFSLSFFSFVSFAGSMWFMPFLSTNY 504
Cdd:MTH00211 453 LGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLG-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 505 ISYLPLNYG-YYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFILWMFILFMLFFIN 573
Cdd:MTH00211 528 LPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
29-570 |
1.24e-97 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 309.02 E-value: 1.24e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 29 SLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISI 108
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISISWM-LNFGSWNyiyyydfISDSFEMSVITVL--- 183
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE-------IQQLFSPTQTPTLpll 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 184 -IVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYL-LLIGCMTMFMAGLGANY 261
Cdd:MTH00004 214 gLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 262 EFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFN 341
Cdd:MTH00004 294 QNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLT 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 342 VSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSM 421
Cdd:MTH00004 374 IGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 422 IGLLIVAVLGGSLLSWLIFPI-PYVIVLPWYLSFLTLLFIIFGSYFGYIISdlNYSSGLFSLSFFSFVSFAGSMWFMPFL 500
Cdd:MTH00004 454 TRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELS--NMTTTLTPPKQNTLHNFSNQLAFFNPL 531
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917341 501 STNYISYLPLNYGY-YSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFILWMFILFMLF 570
Cdd:MTH00004 532 THRLLPMTLLKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
1.14e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 304.14 E-value: 1.14e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 29 SLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 109 LLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISISW-MLNFGSWNYIYYydFISDSFEMSVITVLIvI 186
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 187 ASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYL-LLIGCMTMFMAGLGANYEFDL 265
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 266 SKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 346 SLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 426 IVAVLGGSLLSWLIFPI-PYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYSSGLFSLSFFSFVSFAgsmwFMPFLSTNY 504
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFSNLLA----FFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917341 505 ISYLPLNYGY-YSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFILWMFILFMLF 570
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-572 |
2.50e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 296.11 E-value: 2.50e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 37 FSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLG 116
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 117 LVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISISW-MLNFGSWNYIYYYDFISDSFEMSVITVL-IVIASMTKSA 193
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYL-LLIGCMTMFMAGLGANYEFDLSKIIALS 272
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLcLILGSLTALFAASTAISQHDIKKIIAYS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 273 TLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:MTH00208 332 TTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPF 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 353 LAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLLIVAVLGG 432
Cdd:MTH00208 412 LAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISG 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 433 SLLSWLIFPIPyVIVLPWYLSFLTLLFIIFGSYFGYIIsdlnYSSGLFSLSFFSFVSFAGSMWFMPFLSTNYISYLPLNY 512
Cdd:MTH00208 492 WFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSF----LLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFT 566
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917341 513 GYYSSS-IFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFILWMFILFMLFFI 572
Cdd:MTH00208 567 SLFGSTrTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-470 |
6.42e-91 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 291.67 E-value: 6.42e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 34 WEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWD 113
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 114 GLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISISWMLN-FGSWNY---IYYYDFISDSFEMSVITVLIVIAS 188
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNF-GWYLLLIGCMTMFMAGLGANYEFDLSK 267
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 268 IIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 348 CGMPFLAGFYSKDLILEVA-SLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLLI 426
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1811917341 427 VAVLGGSLLSWL---------IFPIPYVIVLPWYLSFLTLLFIIFGSYFGYII 470
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
34-463 |
5.03e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 286.75 E-value: 5.03e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 34 WEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWD 113
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 114 GLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISISW-MLNFGSWNYIYYydFISDSFEMSVITVLIVIASMTK 191
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 192 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLL-IGCMTMFMAGLGANYEFDLSKIIA 270
Cdd:MTH00108 224 SAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 271 LSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 350
Cdd:MTH00108 304 FSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 351 PFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLLIVAVL 430
Cdd:MTH00108 384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIF 463
|
410 420 430
....*....|....*....|....*....|....*
gi 1811917341 431 GGSLLSWLIFP--IPyVIVLPWYLSFLTLLFIIFG 463
Cdd:MTH00108 464 AGFLISNNIPPttIP-QMTMPLYLKLTALAVTILG 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-448 |
1.90e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 274.93 E-value: 1.90e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 34 WEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 114 GLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISISWMLN-FGSWNY--IYYYDFISDSFEMSVITVLIVIASM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVtIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 269 IALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 349 GMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLLIVA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420
....*....|....*....|
gi 1811917341 429 VLGGSLLSWLIFPIPYVIVL 448
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPT 484
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
46-398 |
9.60e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 267.85 E-value: 9.60e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGW 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKSYNAGMLTA-LSNRIGDVCILISISWML-NFGSWNyIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPA 203
Cdd:MTH00137 162 WYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNfgwyLLLIGCM------TMFMA--GLGANyefDLSKIIALSTLS 275
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 276 QLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1811917341 356 FYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRL-FYYSM 398
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-400 |
1.98e-80 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 264.71 E-value: 1.98e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKSYNAGMLTA-LSNRIGDVCILISISWML-NFGSWNY----IYYYDFISDSFEM-SVITVLIVIASMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdevfAAAPQFFGLGWSAlTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLYLYNF--GWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQ 276
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSP-LFELSPeaLLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 277 LGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1811917341 357 YSKDLILEVAsLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFG 400
Cdd:PRK06590 397 FSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHG 439
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-462 |
1.22e-70 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 238.44 E-value: 1.22e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 34 WEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWD 113
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 114 GLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISISWMLN-FGSWNYIYYYDFIS--DSFEMSVITVLIVIASM 189
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKI 268
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 269 IALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 349 GMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFN--DNNYFISFSMIGLLI 426
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHlhEGDWNLLLPLGILAL 461
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1811917341 427 VAVLGGSLLSWLI-------FPIPYVIV--LPWYLSFLTLLFIIF 462
Cdd:MTH00020 462 GSIFVGYLAKEMIwsfqitlPPIVPLSIklLPVFLSLGGIGLVII 506
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
50-569 |
1.22e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 225.27 E-value: 1.22e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 50 FDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQN 128
Cdd:MTH00210 78 FDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 129 VKSYNAGMLTALSNRIGDVCILISISWMLN-FGSWNYIYYYDFISDSFE---MSVITVLIVIASMTKSAQIPFSSWLPAA 204
Cdd:MTH00210 158 IKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLPDA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGI 283
Cdd:MTH00210 238 MEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 284 LSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:MTH00210 318 CGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 364 EVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFN--DNNYFISFSMIGLLIVAVLGGSLLSWLIFP 441
Cdd:MTH00210 398 ELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYLGKEVVLS 477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 442 IPYVIVLPWYLSFLTLLFIIFGSYFGYIISDLNYSSGLFSLSFFSFVSFAGSMWFM------PFLSTNYISYLPLNYGYY 515
Cdd:MTH00210 478 NVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYTFLnsawqfNYVINHFIVKNIWKFGHL 557
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1811917341 516 -SSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLSDSNFKVYLLTFIlWMFILFML 569
Cdd:MTH00210 558 iTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMI-IFTTLFIS 611
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
24-462 |
4.55e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 210.54 E-value: 4.55e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 24 LMFDYSLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISP 103
Cdd:MTH00095 17 LFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 104 NLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGswnyiyyYDFISDSFEMSVITVL 183
Cdd:MTH00095 97 SVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSFSFFSSSMILM 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 184 IVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLLIGCMTMFMAGLGANYEF 263
Cdd:MTH00095 170 LLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 264 DLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:MTH00095 250 DMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVT 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 344 SLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIG 423
Cdd:MTH00095 330 LFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLVF 409
|
410 420 430
....*....|....*....|....*....|....*....
gi 1811917341 424 LLIVavlggsLLSWLIFPIPYVIVLPWYLSFLTLLFIIF 462
Cdd:MTH00095 410 FSVF------FLWWLNFNLLNLPSLFLYLDFYVPLFYLF 442
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
3.78e-59 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 208.72 E-value: 3.78e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 125 YYQNVKSYNAGMLTALSNRIGDVCILISI---SWMLnfGSWNYIYYYDFISDSFEMSVIT--------VLIVIASMTKSA 193
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWAT--GSFDFDGIADRLSELVSSGAVSgwlalllcILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNF-GWYLLLIGCMTMFMAGLGANYEFDLSKIIALS 272
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 273 TLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLND--------SQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK07376 323 TISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGC 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917341 345 LSLCGMPFLAGFYSKDLILEVASLSwiNFLIFFFYFFSTGLTASYSFRLFYYSMFGD 401
Cdd:PRK07376 403 LAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
31-365 |
6.39e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 191.33 E-value: 6.39e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 31 FIEWEIFslnssMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILL 110
Cdd:MTH00032 64 WIESEIF-----ITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 111 GWDGLGLVSYCLVIYYQN-VKSYNAGMLTALSNRIGDVCILISISWM------LNFGSWNYIYYYDFISDS--------- 174
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRgyygggaye 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 175 ---FEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLLI-GCM 250
Cdd:MTH00032 219 splAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 251 TMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSM-GYSDLAFFHLLTHALFKALLFMCAGSMIHNLN-DSQDIRFMGS 328
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
|
330 340 350
....*....|....*....|....*....|....*..
gi 1811917341 329 IVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEV 365
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-366 |
2.75e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.59 E-value: 2.75e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNYIY----YYDFISDSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 177 MSVITVLIVIASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYLYNFGWY--LLLIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQqiLLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 254 MAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 1811917341 331 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVA 366
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
1.66e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 174.18 E-value: 1.66e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 QNVKSYNAGMLTALSNRIGDVCILISISWM-LNFGSWNYIYYYDFIS--DSFEMSVITVLIVIASMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLYLYNF----GWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPalflGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 279 LMMGILSMGYSDL---AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1811917341 356 FYSKDLILEvASLSWINFLIFFFYFFSTGLTASYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
51-393 |
9.99e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 179.08 E-value: 9.99e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 51 DWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIyyQNVK 130
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 131 SYNAG-MLTALSNRIGDVCILI------------SISWMLNFGSWNyiyyydfiSDSFEMSVITVLIVIASMTKSAQIPF 197
Cdd:PRK12650 156 GGEAGsIRTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWA--------EKPGLTTVVAVLIAVAAFTKSAQFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 198 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYlYNFGWYLLLIGC--MTMFMAGLGANYEFDLSKIIALSTLS 275
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 276 QLGLMMGILSMGySDLAF----FHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMP 351
Cdd:PRK12650 307 QLGWIVATIGVG-TPFALtaavVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1811917341 352 FLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTA----SYSFRL 393
Cdd:PRK12650 385 PLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-364 |
7.12e-47 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 175.49 E-value: 7.12e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 48 FIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY-Y 126
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnH 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 QNVKSYNAGMLTALSNRIGDVCILI------------SISWMLNFGswnyiyyyDFISDSFEMSVITVLIVIASMTKSAQ 194
Cdd:PRK12647 140 EREAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---YLYNfgWYLLLIGCMTMFMAGLGANYEFDLSKIIAL 271
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggtPLWQ--TILPLFGGLTMLTGALLAVRQTDLKLILAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 272 STLSQLGLMMGILSMGySDLA----FFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:PRK12647 290 STVSALGTLVMLLGLG-SELAikaaVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSM 367
|
330
....*....|....*..
gi 1811917341 348 CGMPFLAGFYSKDLILE 364
Cdd:PRK12647 368 AGLPPLFGFLAKELIYE 384
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-423 |
3.42e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 170.46 E-value: 3.42e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 67 LVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 146 DVCILISIS---WMLN-------FGSWNYIYYYDFISDSFeMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 216 HSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFF 294
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 295 HLLTHALFKALLFMCAGSMIHNL--------NDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeva 366
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL--- 421
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1811917341 367 SLSWINFLIFFFYFFST-GLTASYSFRLFYYSMFGD-NNYCSSYMFNDNNYFISFSMIG 423
Cdd:CHL00025 422 NDSWLYSPIFAIIAWSTaGLTAFYMFRIYLLTFEGHlRVHFQNYSGKKNSSFYSISLWG 480
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-366 |
1.24e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 166.17 E-value: 1.24e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 -QNVKSYNAGMLTALSNRIGDVCILISISWML----NFGSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 281 MGILSMGYSDL----------------AFFHLLTHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 1811917341 345 LSLCGMPFLAGFYSKDLILEVA 366
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-400 |
3.54e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 165.75 E-value: 3.54e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 QNVKSYNAGMLTALS-NRIGDVCILISiswMLNFGSwnyiyyydfISDSFEMSVI----------------TVLIVIASM 189
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALLAG---VLLLGH---------IVGSYDLDVVlaagdlirahplyppaLVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKI 268
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVgGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 269 IALSTLSQLGLMMGILSMGySDLA----FFHLLTHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 345 LSLCGMPFLAGFYSKDL----ILEVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFG 400
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFG 436
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-401 |
4.01e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 162.40 E-value: 4.01e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYM-HNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKS-----YNAGMLTALsnriGDVCILISISWMLNF-GSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSS 199
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlYLYNFGWYLLLI--GCMTMFMAGLGANYEFDLSKIIALSTLSQL 277
Cdd:PRK12644 225 WLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPG-FADVPVWRPTVLvlGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 278 GLMMGILSMGYSDLAFFHL---LTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK12644 304 GFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1811917341 355 GFYSKDLILEV----ASLSWINFLIFFFYFFSTGLTASYSFRlFYYSMFGD 401
Cdd:PRK12644 383 GFVAKEAALEAvlhdGALGPAGPVVLAGIVLGSILTVAYSLR-FLWGAFAR 432
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
48-364 |
1.94e-40 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 156.84 E-value: 1.94e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 48 FIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEK-NIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNYIY----YYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWL 201
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLL-LIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLM 280
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVtFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 281 MGILSMG--------------YSDLAF---FHLLTHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:PRK12646 314 MAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIA 392
|
330 340
....*....|....*....|.
gi 1811917341 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLD 413
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
29-474 |
1.54e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 151.57 E-value: 1.54e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 29 SLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISI 108
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWmlnfgswnyiyYYDFISDSFEMSVITVLIVIas 188
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-----------SCWGGSGSFLCCLFFFLIVF-- 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 189 mTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLSKI 268
Cdd:MTH00063 169 -TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 269 IALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIR-----FMGSIVNFMPLTSVCfnvs 343
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV---- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 344 sLSLCGMPFLAGFYSKDLILEVASLSWINFLIFFFYFFSTGLTASYSFRLFyysmfgdNNYCSSYMFNDNNYFISFSMIG 423
Cdd:MTH00063 324 -LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC-------LILFGVKSSLSSGVRFLFFNSG 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1811917341 424 LLivaVLGGSLLSWLIFPI-PYVIVLPWYLSFLTLLFIIFGSYFGYIISDLN 474
Cdd:MTH00063 396 LM---VFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSN 444
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
48-363 |
5.05e-37 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 143.58 E-value: 5.05e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 48 FIFDWMSLLFMSFVMYISSLVIYYSNDYMHNE-------KNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSY 120
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehpvhEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 121 CLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNYIYYYDFISDSFEMSVItVLIVIASMTKSAQIPFSSW 200
Cdd:PRK06525 151 ALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF-LGILFAAWGKSAQLPFYSW 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 201 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRF--SPMLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLG 278
Cdd:PRK06525 230 LPDAMEAPTPASAYLHAASMVKVGVYIFARAiqSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 279 LMMGILSMGY--SDLAF----FHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:PRK06525 310 YMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
330
....*....|.
gi 1811917341 353 LAGFYSKDLIL 363
Cdd:PRK06525 389 FNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
50-364 |
8.28e-37 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 146.22 E-value: 8.28e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 50 FDWMSLLFMSFVMY--------------ISSLVIYYSNDYMHNEK-NIDRFIMIVLMFIISMGFLIISPNLISILLGWDG 114
Cdd:PRK12645 62 LPWIPSLGINFTLYvdglsllfallitgIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 115 LGLVSYCLVIY-YQNVKSYNAGMLTALSNRIGDVCILISISWM-LNFGSWN---YIYYYDFISDSFEMSVITVLIVIASM 189
Cdd:PRK12645 142 TSISSFLLISYwYEREASRYGAQKSMLITVFGGLSMLGGFILLyIMTGSFSireMIANADEIQNSPLFIPAMILILLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlylynFG------WYLLLIGCMTMFMAGLGANYEF 263
Cdd:PRK12645 222 TKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPI-----FAgsqvwfWTVTLVGLITLFWGSLNAVKQT 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 264 DLSKIIALSTLSQLGLMMGILSMGYSDL----------------AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMG 327
Cdd:PRK12645 297 DLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLG 375
|
330 340 350
....*....|....*....|....*....|....*..
gi 1811917341 328 SIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12645 376 GLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFE 412
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
2.13e-36 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 133.83 E-value: 2.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 389 YSFRLFYYSMFGDNNYCSSYMFNDNNYFISFSMIGLLIVAVLGGSLLSWLIFPIPYVIVLPWYLSFLTLLFIIFGSYFGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 469 IISDLNYsSGLFSLSFFSFVSFAGSMWFMPFLSTNYISYLPLNYGYYSSSIFDSGWGELFGGQGLYSFFLYMIDYIQSLS 548
Cdd:pfam06455 81 ELSNLSN-KQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 1811917341 549 DSNFKVYLLTFILWMFILFMLF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-364 |
9.92e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 136.88 E-value: 9.92e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 39 LNSSMVVMTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 119 SYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWML-----NFGSWNYIYYYDFISD--SFEMSVIT-VLIVIASMT 190
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLhvitgTYDIATILQDSELIENikGHPLFLITlILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNfGWYLLL--IGCMTMFMAGLGANYEFDLSKI 268
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 269 IALSTLSQLGLMMGIlsMGYSD---------LAFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK12649 306 LAYSTISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIV 382
|
330 340
....*....|....*....|....*
gi 1811917341 340 FNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-400 |
4.60e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 129.23 E-value: 4.60e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYmhNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 QNVKSYNAGMLTALSNRIGDVCILISISwMLNF--GSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAA 204
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG-LLYGvtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 205 MAAPTPVSALVHSSTLVTAGVYLLIRFspMLYLY--------NFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQ 276
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRI--YFTVFggdfrfalGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 277 LGLMMGILSMGYSDL---AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFL 353
Cdd:PRK08375 307 MGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1811917341 354 AGFYSKDLILeVASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFG 400
Cdd:PRK08375 386 SGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
1.14e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 114.83 E-value: 1.14e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYYS---NDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 123 VIY-YQNVKSYNAGMLTALSNRIGDVCI-LISISWMLNFGSWNYIYYYdfiSDSFEMSVITVLIVIASMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLYLYNFGW--YLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 278 GL-MMGI-------------LSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLNDsQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:PRK08667 307 GIiLMGIglyvifgvygldtLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 1811917341 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
4.71e-26 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 112.10 E-value: 4.71e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 53 MSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKsy 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 133 nAGMLTA----LSNRIGDVCILISIS-WMLNFGSWNYIYYYDFISD---SFEMSVITVLIVIASMTKSAQIPFSSWLPAA 204
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 205 MAAPTPVSALVHSStLVTAGVYLLIRFSPMLYLYNFG-WYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGI 283
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*....
gi 1811917341 284 LSMGYSDLAFFHLLTHALFKALLFMCAGS 312
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-363 |
2.96e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 110.36 E-value: 2.96e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 91 MFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTALSNRIGDVCILISISWMlnfgsWNYIYYYD 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 170 FIS------DSFEMSVITVLIVIASMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSpMLYLYNFGW 242
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV-FDLLGAPGW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 243 Y----LLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMM-----GILSMGYSD-----LAF----FHLLTHALFKA 304
Cdd:PRK06521 274 WwgvlVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFvglglAMVFIAYGMpllaaLALtaalYHLLNHALFKS 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1811917341 305 LLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06521 354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-358 |
1.80e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 104.61 E-value: 1.80e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 140 LSNRIGDVCILISISWMLNF-GSWNYIYYYDFIS-DSFEMSVITV--LIVIAS-MTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtANLDPLTATLlgLALIAGpTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 215 vHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLL-IGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAF 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALTVLIvIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1811917341 294 FHLLTHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 358
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-399 |
6.41e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 102.20 E-value: 6.41e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 55 LLFMSFVMYISSLVIYYSNDYM--HNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSY 132
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLaiNNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 133 NAG-------MLTALSNRIGDVCILISISWMLNFGSWNYIyyydfisdSFEMSVITVLIVIASMTKSAQIPFSSWLPAAM 205
Cdd:PRK06589 166 SGGykylkilMISALLLFLPAVILIYTKTGNLDFVSGGLF--------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 206 AAPTPVSALVHSSTLVTAGVYLLIRFSPMLY-------LYNFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLG 278
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqrIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 279 LMMG---ILSMGYSDLAFFHLLTHALFKALLFMCAGSmIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:PRK06589 318 LALLsafILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1811917341 356 FYSKDLILEVASLS---WINFLIFFFYFFSTGLTASYSFRLFYYSMF 399
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSSIYK 443
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-442 |
5.41e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.66 E-value: 5.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 127 QNVK-SYNAGMLTALSNRIGDVCILISISWM------LNF--------GSWNYIYYYDFISDSFEMSVITVLIVIASMTK 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLY---------LYNFGWYLLLIGCMTMFMAGLGANY 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFgispslidfRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 262 EFDLSKIIALSTLSQLGLMMGILSMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSV 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 339 CFNVSSLSLCGMPFLAGFYSKDLILEvASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYcSSYMFNDNNYFIS 418
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKS-GEEVEHKESPSMS 472
|
410 420
....*....|....*....|....
gi 1811917341 419 FSMIGLLIVAVLGGSLLSWLIFPI 442
Cdd:PRK12667 473 VVILVLALAVLILGILALFLPEIL 496
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-364 |
1.00e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 98.49 E-value: 1.00e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 85 FIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGM-LTALSNrIGDVCILISIswMLNFGSWN 163
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGA--VLVYQANG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 164 YIyyyDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlyLYNFGWY 243
Cdd:PRK07234 173 TF---AFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD--VPGLDLI 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 244 LLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGysdlAFFHlLTHALFKALLFMCAGSmIHNLNDSQDI 323
Cdd:PRK07234 248 VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELI 321
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1811917341 324 RFMGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07234 322 SQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-439 |
2.27e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 97.48 E-value: 2.27e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 48 FIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQ 127
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 128 NV-KSYNAGMLTALSNRIGDVCILISISWML-NFGSWNYIYYYDFISDSFEM--SVITVLIVIASMTKSAQIPFSSWLPA 203
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 204 AM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQL 277
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 278 GLMM-----GILSMGYSDL----------AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK08376 324 GYMLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 343 SSLSLCGMPFLAGFYSKDLILEvaSLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCssYMFNDNNYFISFSMI 422
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEK--VMNVKEPPKPMLVPM 478
|
410
....*....|....*..
gi 1811917341 423 GLLIVAVLGGSLLSWLI 439
Cdd:PRK08376 479 LILAIAIIGMGLFPWQI 495
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
60-403 |
3.48e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 90.60 E-value: 3.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 60 FVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA 139
Cdd:PRK08377 85 LIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYI 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 140 LSNRIGDVCILISISWMLN-FGSWNYIYYYDFIS--DSFEMSVITVLIVIASMTKSAQIPFSSWLPAA-MAAPTPVSALV 215
Cdd:PRK08377 165 VLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAGtiDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 216 hSSTLVTAGVYLLIRfspMLYLY-------NFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGY 288
Cdd:PRK08377 245 -SAFVVKAGLYAMAR---ILYLMqnangwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGT 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 289 S---DLAFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeV 365
Cdd:PRK08377 321 QagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-L 398
|
330 340 350
....*....|....*....|....*....|....*...
gi 1811917341 366 ASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNN 403
Cdd:PRK08377 399 AGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEG 436
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-366 |
7.35e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.95 E-value: 7.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 105 LISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISW-MLNFGSWnyiyyyDFISDSFEMSVITVL 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 184 IVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmlylynfGWYLLL-IGCmtmFMAGLGANY- 261
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGA---AMAVYGVFFa 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 262 --EFDLSKIIALSTLSQLGLMMGILSMGySDL----AFFHLLTHALFKALLFMCAGSMIHNLNDSqDIRFMGSIVNFMPL 335
Cdd:PRK12668 259 llENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPL 336
|
250 260 270
....*....|....*....|....*....|.
gi 1811917341 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILEVA 366
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIISAA 367
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
182-400 |
7.67e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 86.29 E-value: 7.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 182 VLIVIASMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLY---LYNFGWYLLLIGCMTMFMAGL 257
Cdd:COG1008 213 LAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 258 GANYEFDLSKIIALSTLSQLGLM-MGILSMGYSDL--AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMP 334
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMP 370
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917341 335 LTSVCFNVSSLSLCGMPFLAGFYSKDLILeVASLSwINFLIFFFYFFSTGLTASYSFRLFYYSMFG 400
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVL-LGAFQ-VNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
173-318 |
2.07e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 82.01 E-value: 2.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 173 DSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLY-------LYNFGWYLL 245
Cdd:PRK08601 199 GTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHddiaqilLLIFASISV 277
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917341 246 LIGCMTMFMaglganyEFDLSKIIALSTLSQLGLMMGILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLN 318
Cdd:PRK08601 278 LIGTGISLV-------QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-431 |
9.70e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.90 E-value: 9.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 51 DWMSLLFMSFVMYISSLVIYYSNDYMHNEKNiDRFIMIVLMFIISMGfLIISPNLISILLGWDGLGLVSYCLVIYYQNVK 130
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRVK-EFYALLLLLEAGVIG-VFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 131 SYNAGMLTALSNRIGDVCILISISWM--LNFGSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMA-A 207
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 208 PTPVSALVhSSTLVTAGVYLLIRFS----PMLYLYnFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGL-MMG 282
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNlplfPDASLY-FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 283 ILSM---GYSDlAFFHLLTHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 359
Cdd:TIGR01972 312 IFSFnelGISG-AVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917341 360 DLILeVASLSwINFLIFFFYFFSTGLTASYSFRLFYYSMFGDNNYCSSYMFNDNNyFISFSMIGLLIVAVLG 431
Cdd:TIGR01972 390 FLIL-LGSFK-VNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLN-GREIAVLAPLVVLILF 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-366 |
1.59e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 75.92 E-value: 1.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMhNEKNIDRFIMIVLMFIISMG--FLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATLGmmLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 124 IYYQNVKSYNAGM----LTALSNRIgdvcILISISWMLNF-GSWNYIYYYDFISDSFEMSVI----TVLIVIASMTKSAQ 194
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSPLlllgLVLVLAGLAFKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 195 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLYLYNFGWYLLL--IGCMTMFMAGLGANYEFDLSKII 269
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 270 ALSTLSQLG-LMMGILSMGYSDL--AFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLS 346
Cdd:COG1007 298 AYSSIAHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330 340
....*....|....*....|
gi 1811917341 347 LCGMPFLAGFYSKDLILEVA 366
Cdd:COG1007 378 LAGIPPTAGFFGKFYVFSAA 397
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
29-366 |
1.24e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.88 E-value: 1.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 29 SLFIEWEIFSLNSSMVVMTFIFDWMSLLFMSFVMYISSlviyysndyMHNEKNIDRFIMIVLMFIISMGFLIISPNLISI 108
Cdd:PRK08668 53 KLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMV---------SEKTKNDAYFNMFALMSLAGVLGVFLANDLLTL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 109 LLGWDGLGLVSYcLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLN-FGSWNYIYYYDFISD--SFEMSVITVL-I 184
Cdd:PRK08668 124 YIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdtSTGFALIVFLfL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 185 VIASMTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPML----YLYNFGWY---------LLLIGCM 250
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLpgtkLFSEFGTYrgvplfnyiLAWLGNI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 251 TMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLNDSQdIRFMG 327
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMG 360
|
330 340 350
....*....|....*....|....*....|....*....
gi 1811917341 328 SIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVA 366
Cdd:PRK08668 361 GLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-401 |
1.47e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.06 E-value: 1.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 177 MSVITVLIVIASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYLYN--FGWYLLLI-GCMTM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDtsFTHYLILIlALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 253 FMAGLGANYEFDLSKIIALSTLSQLGLM-MGILSMGYSDL--AFFHLLTHALFKALLFMCAGSMIHnLNDSQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917341 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEvASLSWINFLIFFFYFFSTGLTASYSFRLFYYSMFGD 401
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
2.22e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.94 E-value: 2.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPM---LYLYnFGWYLLLIGCMTMFMAGLGANYEFDLSKIIA 270
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLggnAPLW-WGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 271 LSTLSQLGLMMGILSMGYSDLA--------------FFHLLTHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLT 336
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVI 353
|
170 180
....*....|....*....|
gi 1811917341 337 SVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
173-403 |
5.64e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.13 E-value: 5.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 173 DSFEMSVITVLIVIASMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFG---WYLLLIGC 249
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 250 MTMFMAGLGANYEFDLSKIIALSTLSQLGLM-MGILSMGYSDL--AFFHLLTHALFKALLFMCAGSMIHnLNDSQDIRFM 326
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAGIngAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917341 327 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEvASLSwINFLIFFFYFFSTGLTASYS-FRLFYYSMFGDNN 403
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ-GALD-NGAYILLALMLITSLITMYSlFRIFFLAYWGDKD 435
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-401 |
2.25e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 69.46 E-value: 2.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 140 LSNRIGDVCILISISWM-----LNFGSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 214 LvHSSTLVTAGVYLLIRFS-PMLYLY--NFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLG-LMMGILSMGYS 289
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 290 DL--AFFHLLTHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILevas 367
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL---- 401
|
250 260 270
....*....|....*....|....*....|....*.
gi 1811917341 368 LSWINFLIFFFYFFSTG--LTASYSFRLFYYSMFGD 401
Cdd:PRK05846 402 LGSFQVNPVIAFIATTGliLAAVYSLWLYQRVMFGP 437
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-370 |
1.28e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 66.92 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 178 SVITVLIVIASMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLL-IGCMTMFMA 255
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMvVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 256 GLGANYEFDLSKIIALSTLSQLGLMMGILSM----GYSDlAFFHLLTHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVN 331
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAK 365
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1811917341 332 FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE--VASLSW 370
Cdd:PRK12665 366 ASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEagAEDGTW 406
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
177-363 |
5.39e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 64.95 E-value: 5.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 177 MSVITVLIVIASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLYLYNFGW----YLLLI-GCM 250
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgRLLLIfGLL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 251 TMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGySDLAFF----HLLTHALFKALLFMCAGSMIHNLnDSQDIRFM 326
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQKY-GTRDINVI 368
|
170 180 190
....*....|....*....|....*....|....*..
gi 1811917341 327 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-366 |
1.02e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 64.07 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMhNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKSYNAGM----LTALSNRIgdvcILISISWMLNF-GSWNYIYYYDFISDSFEMSVI----TVLIVIASMTKSAQIP 196
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 197 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLYL-YNFGWYLLLIGC--MTMFMAGLGANYEFDLSKIIALS 272
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGgLSEDWQQVLAIIaiASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 273 TLSQLG-LMMGILSMGYSDL--AFFHLLTHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 349
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|....*..
gi 1811917341 350 MPFLAGFYSKDLILEVA 366
Cdd:PRK05777 382 IPPTAGFWGKFYVFEAA 398
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-363 |
1.30e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.62 E-value: 1.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 182 VLIVIASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLY----LYNFGWYLLLIGCMTMFMAG 256
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgaAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 257 LGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDLAF---FHLLTHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVNFM 333
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190
....*....|....*....|....*....|
gi 1811917341 334 PLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-366 |
3.02e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.28 E-value: 3.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 49 IFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 129 VKSYNAGMLTALSNRIGDVCILISISWMLNF-GSWNYIYYYDFISDSFEMSVI---TVLIVIASMTKSAQIPFSSWLPAA 204
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWLIQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYNFGWYLLLIGCMTMFMAGLG-------ANYEFDLSKIIALSTLSQL 277
Cdd:PRK12662 236 YSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYSSISHI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 278 GLMMGILSMG-YSDL--AFFHLLTHALFKALLFMCAGSMIHNLnDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK12662 316 GYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
330
....*....|..
gi 1811917341 355 GFYSKDLILEVA 366
Cdd:PRK12662 395 GFVAKWYILDAF 406
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
3.61e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 56.01 E-value: 3.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 182 VLIVIASMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------YLYNFGWYLLLIGCM-TMF 253
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 254 MAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGYSDL---AFFHLLTHALFKALLFMCAGSM----------------I 314
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1811917341 315 HNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-359 |
4.46e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 52.70 E-value: 4.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 47 TFIFDWMSLLFMSFVMYISSLVIYYSNDYMHN-EKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECtEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 Y-QNVKSYNAGMLTALSNRIGDVCILISISWM--LNFGSWNYIYYYDFISDSFEMSVITVLIVIASMT-----KSAQIPF 197
Cdd:CHL00049 154 TkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 198 SSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FSPMLYLYNFGWYLLL--IGCMTMFMAGLGANYEFDLSKIIALST 273
Cdd:CHL00049 234 HQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 274 LSQLG-LMMGILSmGYSDLAFFHLLTHALFkaLLFMCAGS----MIHNLNDSQD-IRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:CHL00049 313 IGQIGyVIIGIIV-GDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSL 389
|
330
....*....|..
gi 1811917341 348 CGMPFLAGFYSK 359
Cdd:CHL00049 390 GGIPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-366 |
5.01e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 5.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYysnDYMHNEKNIDRFIMIVLMFIISMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 126 YQNVKSYNAGMLTALSNRIGDVCILISISWMLNF-GSWNY--IYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLP 202
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 203 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQL 277
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 278 GLMMGILSMG--YSDLA-FFHLLTHALFKALLFMCAGSmIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK06277 303 GYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|..
gi 1811917341 355 GFYSKDLILEVA 366
Cdd:PRK06277 382 GFQSKLMLAQAA 393
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
186-358 |
6.37e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 6.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 186 IASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLYLYnFGWYLLLIGCMTMFMAGLGAN 260
Cdd:PRK12561 193 IAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvqmlPDAHVY-FAPALAILGVVNIIYGALNAF 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 261 YEFDLSKIIALSTLSQLG-LMMGILSmgYSDL----AFFHLLTHALFKALLFMCAGSM---IHNLNdsqdIRFMGSIVNF 332
Cdd:PRK12561 271 AQDNVKRRLAYSSVSHMGfVLLGIAA--FTDLgisgAMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKV 344
|
170 180
....*....|....*....|....*.
gi 1811917341 333 MPLTSVCFNVSSLSLCGMPFLAGFYS 358
Cdd:PRK12561 345 MPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-364 |
1.98e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 57 FMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMF-IISMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYNAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 136 MLTALSNrigdvcilISISWMLNFGSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPF--SSWLPAAMAAPTPVSA 213
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 214 LVHSSTLVTAGVYLLIRF----SPMLYLYnFGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSM--- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKMtiltQTIPIGY-FGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 287 ---GYSDLAFFHLLT-------HALFKALLFMCAGSMihnlnDSQDIRFMGSIVNFMplTSVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK06459 275 tkqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGG 347
|
....*...
gi 1811917341 357 YSKDLILE 364
Cdd:PRK06459 348 VASWLLLE 355
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-466 |
3.45e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 46.65 E-value: 3.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 53 MSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRFIMIVLMFIISMGFLIISP--------------------------NLI 106
Cdd:PRK12664 7 AISLYGFFFGLIFIVLPLLLYDWSEPVYNLDLVLFIVLSFSLALIFLYILPiknmrfsemlcyllyyissiaaisssSLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 107 SILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISISWMLNFGSWNYIYyydfisdsfemsviTVLIVI 186
Cdd:PRK12664 87 LVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYC--------------KLLFML 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 187 ASMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLYLYNFGWYLLLIGCMTMFMAGLGANYEFDLS 266
Cdd:PRK12664 153 GLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLEQNIR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 267 KIIALSTLSQLGLMMGILSMGYS-----DLAFFHLLTHALFKALLFMCAGSMIhnlNDSQDIRF--MGSIVNfMPLTSVC 339
Cdd:PRK12664 227 RLLCYNVVGQMGLLIIAIGFSGSsgvaiGILILQIVLSVVYQTLLFMVADSVI---NRTRKFNLnrVGGLFK-MSLEAMC 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 340 FNVSSLSLCGMPFLAGFYSKDLILEVASLSWINFLIF--FFYFFSTGLTASYSFRLFYYSMFGDNNycSSYMFNDNNYFI 417
Cdd:PRK12664 303 CIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFWYAFISKSK--SKPEAEKVYIGS 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917341 418 SFSMIGLLIVAVLGGSLLSWLIF----PIPY----VIVLPWYLSFLTLLFIIFGSYF 466
Cdd:PRK12664 381 KLSMIILVLICVVLGMFNSYLLFynlpSFVYtlksVALQLGLILGTTLLFICLRKLF 437
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
3.65e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 38.56 E-value: 3.65e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1811917341 46 MTFIFDWMSLLFMSFVMYISSLVIYYSNDYMHNEKNIDRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
3.68e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 42.89 E-value: 3.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 181 TVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYnfgwYLLLIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 261 YEFDLSKIIALSTLSQLGLMMGILSMGySDLAFFHLLTHALFKALLFMcagsmIHNLNDSQDIRFMGSIVNFMPLTSVCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 1811917341 341 NVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
179-362 |
5.96e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 5.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 179 VITVLIVIASMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYLYnfGW-----YLLLIGCMTM 252
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPE--AWvylapWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 253 FMAGLGANYEFDLSKIIALSTLSQLG--LMMGILSMGYSDL-AFFHLLTHALFKALLFMCAGsMIHNLNDSQDIRFMGSI 329
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 1811917341 330 VN---FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLI 362
Cdd:PRK06473 362 LNperGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
191-447 |
8.29e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.97 E-value: 8.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLYLYNFGWY--LLLIGCMTMFMAGLGANYEFDLSK 267
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAplIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 268 IIALSTLSQLGLM-MGILSMGYSDL--AFFHLLTHALFKALLFMcAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:MTH00204 302 LIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 345 LSLCGMPFLAGFYSkDLILEVASLSWiNFLIFFFYFFSTGLTASYSFRLFYYSMFGDNnycSSYMF--NDNNYFISFSMI 422
Cdd:MTH00204 381 LANMGFPLSCNFVG-EFFSLLAAFEY-SLGLGVLVTSGMVWSAAYSLYLYNRISFGGG---SNYLLfsRDLNRRELLAIL 455
|
250 260
....*....|....*....|....*
gi 1811917341 423 GLLIVAVLGGSLLSWLIFPIPYVIV 447
Cdd:MTH00204 456 PLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-364 |
1.28e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.62 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 179 VITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLYLYNFGWYLL-----LIGCMTMF 253
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaIIGTISVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 254 MAGLGANYEFDLSKIIALSTLSQLG--LMMGILSMGYSDL-AFFHLLTHALFKALLFMCAGsMIHNLNDSQDIRFMGSIV 330
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLM 362
|
170 180 190
....*....|....*....|....*....|....*..
gi 1811917341 331 N---FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07363 363 NpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
159-363 |
1.41e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 41.11 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 159 FGSWNYIYYYDFISDSFEMSVITVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYly 238
Cdd:MTH00200 73 GGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 239 nfGWYLLLIGCMTMFMAGLGANYEFDLSKIIALSTLSQLGLMMGILSMGySDLAFFHLLTHALFKALLFMcagsmIHNLN 318
Cdd:MTH00200 151 --SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLL 222
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1811917341 319 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL 267
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
3.00e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.90 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 181 TVLIVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYLYnfgwYLLLIGCMTMFMAGLGAN 260
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 261 YEFDLSKIIALSTLSQLGLMMGILSMGySDLAFFHLLTHALFKALLFMcagsMIHNLNDSQDIRFMGSIVNFMPLTSVCF 340
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|....
gi 1811917341 341 nVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00070 246 -LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
184-422 |
3.81e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 184 IVIASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLYL--YNFGWYLLLIGCMTMFMAGLGAN 260
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLgaQNLAPAVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 261 YEFDLSKIIALSTLSQLGLMMgiLSMGYSDL-----AFFHLLTHALFKALLFMCAgSMIHNLNDSQDIRFMGSIVNFMPL 335
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGLVS--ITLVTHDIigltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPI 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917341 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILeVASLSWiNFLIFFFYFFSTGLTASYSFRLFYYSMFG--DNNYCSSYMFNDN 413
Cdd:MTH00226 393 WGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NPIIGVFVCSGVILSAVYSFYFANRVTFGapGNLITFARDVNRR 470
|
....*....
gi 1811917341 414 NYFISFSMI 422
Cdd:MTH00226 471 EFYITASMV 479
|
|
| |
