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Conserved domains on  [gi|1811917612|gb|QID03862|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Atractomorpha psittacina]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 9.28e-145

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 409.93  E-value: 9.28e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917612 246 SLIFLGGDFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 9.28e-145

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 409.93  E-value: 9.28e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917612 246 SLIFLGGDFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.27e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 3.27e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  14 ILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISLVVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  94 FVFPYLTYM--CSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLFD 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 172 FMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917612 252 G------DFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 1.72e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.08  E-value: 1.72e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   1 MLGIDLIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  81 SPVFSLMISLVVWFVFPYLTYMC--SFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 159 NLIILIGSFNLFDFMVYQ-NYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917612 238 IIFMSMFISLIFLGG----------DFYLLIFYFSL--GLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpilplGGLPGILWFLLktLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 9.28e-145

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 409.93  E-value: 9.28e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917612 246 SLIFLGGDFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 11-309 2.44e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 355.50  E-value: 2.44e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00225    5 LKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLF 170
Cdd:MTH00225   85 ILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00225  165 DFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917612 251 GGDFYL--LIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKI 309
Cdd:MTH00225  245 GGFFVTidLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 11-307 1.37e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 328.37  E-value: 1.37e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00143    5 LSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLF 170
Cdd:MTH00143   85 LLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00143  165 EISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917612 251 GGDFYL-----LIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGL 307
Cdd:MTH00143  245 GGSSVLfllggVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-307 8.36e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 301.06  E-value: 8.36e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917612 246 SLIFLGGDFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGL 307
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-311 4.11e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 298.96  E-value: 4.11e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917612 246 SLIFLGGDfYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-312 2.95e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 297.30  E-value: 2.95e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1811917612 246 SLIFLGGDFYLLIFYFSLGLIIF-------CFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILLF 312
Cdd:MTH00071  244 TILFLGSTYNHLQPELSTMNLMIkasilsmLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-311 9.91e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 293.45  E-value: 9.91e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   8 MGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLM 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  88 ISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSF 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 168 NLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISL 247
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917612 248 IFLGG-------DFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 11-315 1.69e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 293.04  E-value: 1.69e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00040    8 INLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLAL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLF 170
Cdd:MTH00040   88 LLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLS 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00040  168 SISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFL 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917612 251 GGD--------FYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILLFKFI 315
Cdd:MTH00040  248 GGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 11-298 1.16e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 291.03  E-value: 1.16e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLF 170
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00111  169 TLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1811917612 251 GGDFYLL---IFYFSLG----LIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSL 298
Cdd:MTH00111  249 NPSTLNLppeLFTINLMtktlLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.27e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 3.27e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  14 ILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISLVVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  94 FVFPYLTYM--CSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLFD 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 172 FMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917612 252 G------DFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 6-311 1.17e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 278.03  E-value: 1.17e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   6 LIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00134    5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIG 165
Cdd:MTH00134   85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 166 SFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 245
Cdd:MTH00134  165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917612 246 SLIFLGGDFYLLIFYF-SLGLII------FCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00134  245 AILFLGASHIPTLPELtTINLMTkaallsVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 11-311 2.00e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 277.05  E-value: 2.00e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00010    7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNlF 170
Cdd:MTH00010   87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS-F 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00010  166 SKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1811917612 251 GGDFYLLIFYFSLGL----IIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKILL 311
Cdd:MTH00010  246 SFIPSIFISDLMLILktvfLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 1.72e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.08  E-value: 1.72e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   1 MLGIDLIMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  81 SPVFSLMISLVVWFVFPYLTYMC--SFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 159 NLIILIGSFNLFDFMVYQ-NYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917612 238 IIFMSMFISLIFLGG----------DFYLLIFYFSL--GLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpilplGGLPGILWFLLktLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-309 8.34e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 265.82  E-value: 8.34e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   8 MGGLNFILLVIFV--LMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFS 85
Cdd:MTH00054    1 MGIIIIKILAILVplLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  86 LMISLVVWFVFPYLT--YMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIIL 163
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 164 IGSFNLFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSM 243
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917612 244 FISLIFLGGDFYLLI----------FYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKI 309
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 11-307 2.84e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.97  E-value: 2.84e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:MTH00216   10 IKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLAL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYL--TYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFN 168
Cdd:MTH00216   90 IVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLS 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 169 LFDFMVYQ-NYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISL 247
Cdd:MTH00216  170 ITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTI 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917612 248 IFLGG--------DFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGL 307
Cdd:MTH00216  250 LFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
11-298 1.81e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 252.04  E-value: 1.81e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  11 LNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISL 90
Cdd:PRK06076   14 LKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAF 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  91 VVWFVFPYL-TYMCSFV-YGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFN 168
Cdd:PRK06076   94 LAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLN 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 169 LFDFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLI 248
Cdd:PRK06076  174 LSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTL 253

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 249 FLGG--------DFYLLIFYFSL--GLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSL 298
Cdd:PRK06076  254 FLGGwlppfplgGGIPGAIWFVLkvAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 15-309 2.83e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.42  E-value: 2.83e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  15 LLVIFV--LMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISLVV 92
Cdd:MTH00029   13 LLIIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  93 WFVFPYL--TYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLF 170
Cdd:MTH00029   93 WAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 171 DFMVYQNYCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFL 250
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 251 GG-----------------------DFYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGL 307
Cdd:MTH00029  253 GGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332


                  ..
gi 1811917612 308 KI 309
Cdd:MTH00029  333 LI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-309 3.07e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.98  E-value: 3.07e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  12 NFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVFSLMISLV 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  92 VWFVFPYLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILIGSFNLFD 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 172 FMVYQNYcwFVFFCFPLMIscfascLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFLg 251
Cdd:MTH00090  161 SFSLSLF--VIYLPFLIMI------IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917612 252 gDFYLLIFYFSLGLIIFcfvwVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFFCGLKI 309
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-304 8.48e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 164.71  E-value: 8.48e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   7 IMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVfsL 86
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--L 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  87 MISLVVWFVFPYLTYMCSFVYGF--LFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILI 164
Cdd:MTH00058   79 LVLLVVFYCFIYGSYYSGSYSSLslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCY 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 165 GSFNLFDFMVYqnyCWFVFFCFPLMISCFASC-LAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSM 243
Cdd:MTH00058  159 GSYSLVDFYYS---GWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917612 244 FISLIFLGGDFYLLIFYFSLgliiFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFF 304
Cdd:MTH00058  236 LGSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 10-312 2.85e-28

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 111.97  E-value: 2.85e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  10 GLNFILLVIFVLMSVAFLTLF-----ERKVLGYIHIRKGPNKLGFIGILQPFSDALKLVSKEQTVPFVSNYILYYFSPVF 84
Cdd:CHL00032   25 GLIWILVPILTLVLGITIGVLvivwlEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSI 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  85 SLMISLVVWFVFP--YLTYMCSFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLII 162
Cdd:CHL00032  105 AVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 163 LIGSFNLFDFMVYQnyCWFVFFCFPL------MISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYT 236
Cdd:CHL00032  185 LSNSLSTVDIVEAQ--SKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 237 SIIFMSMFISLIFLGG-DF---YLLIFYF------------SLGLII-------FCFVWV--RGTFPRFRYDKLMYLAWK 291
Cdd:CHL00032  263 NLLVSSLFVTVLYLGGwNLsipYIFIPELfeinktggvfgtTIGIFItlaktylFLFISIttRWTLPRLRMDQLLNLGWK 342

                         330       340
                  ....*....|....*....|.
gi 1811917612 292 SFLPLSLNFLVFFCGLKILLF 312
Cdd:CHL00032  343 FLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-304 3.62e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 110.66  E-value: 3.62e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612   7 IMGGLNFILLVIFVLMSVAFLTLFERKVLGYIHIRKGPnklgfiGILQPFSDALKLVSKEQTVPFVSNYIlYYFSPVFSL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612  87 MISLVVWFVFPYLTYMC--SFVYGFLFFLCCTSLGVYPMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLNLIILI 164
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917612 165 GSFNLFDFMVYQN---YCWFVFFCFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFM 241
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1811917612 242 SMFISLIFLGGD------FYLLIFYFSLGLIIFCFVWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLVFF 304
Cdd:COG0650   234 LSLFVNLFLPWGialtllLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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