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Conserved domains on  [gi|1812385353|gb|QID48481|]
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cytochrome b [Eucriotettix oculatus]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 629.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  12 IKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMM 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  92 FMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 172 DNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 252 SDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1812385353 332 SIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 629.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  12 IKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMM 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  92 FMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 172 DNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 252 SDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1812385353 332 SIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-365 1.35e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 361.80  E-value: 1.35e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  10 PLIKMINHSLiDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  90 MMFMCMYLHIGRGLYYESFylKE----TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWI 165
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 166 WGGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEK----IPFHPFFTWKDSVTMILLLLLT 240
Cdd:COG1290   176 FGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNlsDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIP--NKLGGVAALLMSITILMILPFYKKSKFQGIQF 318
Cdd:COG1290   256 ALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1812385353 319 YPWNQYMFWILVTSIIMLTWIGKQPveDPYIILGQILTLMYFSYFML 365
Cdd:COG1290   334 RPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 2.88e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 267.31  E-value: 2.88e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  10 PLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  90 MMFMCMYLHIGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1812385353 168 GFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 8.47e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 248.07  E-value: 8.47e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  19 LIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  99 IGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1812385353 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-314 1.15e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 53.65  E-value: 1.15e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQ 121
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 629.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  12 IKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMM 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  92 FMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 172 DNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 252 SDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1812385353 332 SIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00119
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 591.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFS-YFMLNSWMTILWNKLIK 378
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLN 379
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 579.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMTILWNKLI 377
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
CYTB MTH00191
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 578.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   5 LRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  85 MNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 165 IWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLIS 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 245 TQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQY 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1812385353 325 MFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
CYTB MTH00131
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 576.22  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   5 LRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  85 MNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 165 IWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLIS 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 245 TQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQY 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1812385353 325 MFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
CYTB MTH00074
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 572.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMTILW-NKLIK 378
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLeNKLLK 379
CYTB MTH00100
cytochrome b; Provisional
 3-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 567.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   3 MPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRN 82
Cdd:MTH00100    2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  83 IHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIV 162
Cdd:MTH00100   82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 163 QWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTML 242
Cdd:MTH00100  162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 243 ISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWN 322
Cdd:MTH00100  242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 323 QYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMTILWNKLIK 378
Cdd:MTH00100  322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILiLMPIASLIENNLLK 378
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 556.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMTILWNKLIK 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00034
cytochrome b; Validated
 4-377 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 543.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   4 PLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNI 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  84 HMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 164 WIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLI 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 244 STQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1812385353 324 YMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMTILWNKLI 377
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLfFFPLISYLENKLI 377
CYTB MTH00224
cytochrome b; Provisional
 1-378 8.73e-173

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 486.35  E-value: 8.73e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMTILWNKLIK 378
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
CYTB MTH00022
cytochrome b; Validated
 3-365 3.98e-170

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 479.58  E-value: 3.98e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   3 MPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRN 82
Cdd:MTH00022    1 MPLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  83 IHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIV 162
Cdd:MTH00022   81 LHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 163 QWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTML 242
Cdd:MTH00022  161 QWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 243 ISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWN 322
Cdd:MTH00022  241 IVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLG 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1812385353 323 QYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00022  321 RMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00053
cytochrome b; Provisional
 1-378 1.92e-167

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 473.04  E-value: 1.92e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353   1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385353 321 WNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMTILWNKLIK 378
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLiLMPLAGYLENKLLK 379
CYTB MTH00033
cytochrome b; Provisional
 17-365 1.92e-130

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 378.90  E-value: 1.92e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  17 HSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  97 LHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYN--LSDP 254
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPRIEtlLQDP 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 255 DNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILVTSII 334
Cdd:MTH00033  253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1812385353 335 MLTWIGKQPV-EDPYIILGQILTLMYFSYFML 365
Cdd:MTH00033  333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-365 1.35e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 361.80  E-value: 1.35e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  10 PLIKMINHSLiDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  90 MMFMCMYLHIGRGLYYESFylKE----TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWI 165
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 166 WGGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEK----IPFHPFFTWKDSVTMILLLLLT 240
Cdd:COG1290   176 FGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 241 MLISTQAPYNlsDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIP--NKLGGVAALLMSITILMILPFYKKSKFQGIQF 318
Cdd:COG1290   256 ALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1812385353 319 YPWNQYMFWILVTSIIMLTWIGKQPveDPYIILGQILTLMYFSYFML 365
Cdd:COG1290   334 RPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
CYTB MTH00086
cytochrome b; Provisional
 13-365 9.04e-123

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 358.48  E-value: 9.04e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  13 KMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMF 92
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  93 MCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVD 172
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 173 NPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVtMILLLLLTMLISTQAPYNLS 252
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAY-NIIFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 253 DPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYkksKFQGIQFYPWNQYMFWILVTS 332
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1812385353 333 IIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 2.88e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 267.31  E-value: 2.88e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  10 PLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  90 MMFMCMYLHIGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1812385353 168 GFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 8.47e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 248.07  E-value: 8.47e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  19 LIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  99 IGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1812385353 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
CYTB MTH00046
cytochrome b; Validated
 11-358 1.48e-81

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 253.37  E-value: 1.48e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  11 LIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASM 90
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  91 MFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFA 170
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 171 VDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSN-QEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPY 249
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 250 NLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVaALLMSITILMILPFYKKSKFQGIqfypWNQYMFWIL 329
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-VLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315

                         330       340
                  ....*....|....*....|....*....
gi 1812385353 330 VTSIIMLTWIGKQPVEDPYIILGQILTLM 358
Cdd:MTH00046  316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 1.23e-44

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 149.17  E-value: 1.23e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILVTSIIMLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1812385353 339 IGKQPVEDPYIILGQILTLMY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-354 1.01e-41

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 143.17  E-value: 1.01e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 208 NPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 288 KLGGVAALLMSITILMILPFYKKSKFQGiQFYPWNQYMFWILVTSIIMLTWIGKQPVEDPYIILGQI 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 2.59e-41

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 144.85  E-value: 2.59e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  34 FGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLHIGRgLYYESFYLKE- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLR-VFFTGGYKKPr 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 113 --TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTLSRFFSMH-FMLPFI 189
Cdd:PRK03735  123 elNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWA 202

                         170       180
                  ....*....|....*....|.
gi 1812385353 190 MMAFILMHLIFLHKTGSNNPL 210
Cdd:PRK03735  203 LAVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 6.05e-38

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 135.62  E-value: 6.05e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  25 PSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLHIGRgLY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VY 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353 105 YESFYLKE---TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTLSRFFS 181
Cdd:CHL00070  106 LTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                         170       180       190
                  ....*....|....*....|....*....|
gi 1812385353 182 MH-FMLPFIMMAFILMHLIFLHKTGSNNPL 210
Cdd:CHL00070  186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-229 5.86e-37

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 131.59  E-value: 5.86e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385353  89 SMMFMCMYLHIGRGLYYESFYLKE--TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1812385353 167 GGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKD 229
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKM 144
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 259-314 9.32e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 57.11  E-value: 9.32e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQ 122
petD CHL00058
cytochrome b6/f complex subunit IV
 259-314 6.47e-09

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 54.62  E-value: 6.47e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:CHL00058   65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQ 121
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-314 1.15e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 53.65  E-value: 1.15e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385353 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQ 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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