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Conserved domains on  [gi|1812385374|gb|QID48500|]
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NADH dehydrogenase subunit 3 [Bolivaritettix lativertex]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 6.94e-34

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 113.33  E-value: 6.94e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLNYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 6.94e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 113.33  E-value: 6.94e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLNYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 5.12e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.87  E-value: 5.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  20 ILSKMISQKlIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTVFIAT 99
Cdd:pfam00507   2 LLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1812385374 100 LLIGLYYEWIQGMLK 114
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-115 3.66e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 3.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKlIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLnYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:COG0838    87 LGW-FGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 6.94e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 113.33  E-value: 6.94e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLNYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 2.49e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 107.25  E-value: 2.49e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1812385374  81 MKNSNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.08e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 99.68  E-value: 2.08e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1812385374  81 MKNSNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 2.79e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 94.28  E-value: 2.79e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKLIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1812385374  81 MKNSNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 5.12e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.87  E-value: 5.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  20 ILSKMISQKlIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTVFIAT 99
Cdd:pfam00507   2 LLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1812385374 100 LLIGLYYEWIQGMLK 114
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 6.97e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 6.97e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1812385374  81 MKNSNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWAT 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-115 3.66e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 3.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKlIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLnYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:COG0838    87 LGW-FGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-116 6.63e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 83.01  E-value: 6.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILlmTILSKMISQKLIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00113    5 SMLTISLALSTIL--TTLNFWLTQTKP-DNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385374  84 SNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 8.29e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 83.04  E-value: 8.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQkLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMI-- 78
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPwg 79

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1812385374  79 TIMKNSNLNYWWLSTTVFIATLliGLYYEWIQGMLKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTL--GLIYEWLQGGLEWA 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 4-115 1.07e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 82.64  E-value: 1.07e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMTILSKMISQKLIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00203    3 LIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQL 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLNYWWLSTtvFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00203   83 SSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 14-116 9.91e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 80.04  E-value: 9.91e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  14 IILLMTILSKMISQKLIF----------DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00069    1 LIMLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385374  84 SNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 3.16e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 78.83  E-value: 3.16e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKlifdrEKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00106    4 MLTLLTNTLLASLLVLIAFWLPQLNIYS-----EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1812385374  81 MKNSNLNYWWLSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 1.60e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.21  E-value: 1.60e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   8 MAVTLSIILLMTILSKMISQKLiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLP-MITIMKNSNL 86
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                          90       100       110
                  ....*....|....*....|....*....|
gi 1812385374  87 NYWwlSTTVFIATLLIGLYYEWIQGMLKWA 116
Cdd:PRK06602   94 GFV--EAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-115 6.43e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.48  E-value: 6.43e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   4 LLTTMAVTLSIILLMtiLSKMISQKlIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00018    5 ILLIFSVVLSALFSG--ASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385374  84 SNLNYWWLsTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00018   82 IAPFGFWT-MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.65e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 72.05  E-value: 1.65e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLNYWWLsTTVFIATLLIGLYYEWIQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWV-MYLFLIILTIGLIYEWVKG 113


                  ....
gi 1812385374 112 MLKW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 12-115 1.88e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.58  E-value: 1.88e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  12 LSIILLMTILSKMISQKLIF----DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLN 87
Cdd:MTH00030   16 VGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLF 95

                          90       100
                  ....*....|....*....|....*...
gi 1812385374  88 YWWLSTTvFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00030   96 SFWIVYT-FLIVLAIGLAYEWIKGGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
11-115 2.43e-11

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 56.21  E-value: 2.43e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  11 TLSIILLMTILSKMISQKLI-FDRE--KSSPFECGFNPQTHP-RIpfSVQFFLISMLFLIFDIEITLMLPMITIMKNSNL 86
Cdd:PRK08489   20 TFVAFFLTTRLARFISRKLAqKNTEklKLAIYECGPEPVKQPnRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLGL 97

                          90       100
                  ....*....|....*....|....*....
gi 1812385374  87 nYWWLSTTVFIATLLIGLYYEWIQGMLKW 115
Cdd:PRK08489   98 -FGLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 31-115 1.39e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.29  E-value: 1.39e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  31 FDREKSSPFECGFNPQTHPRIP--FSVQFFLISMLFLIFDIEITLMLPMiTIMKNSNLNYWWLSTTVFIATLLIGLYYEW 108
Cdd:PRK07928   33 YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPW-AVSFDALGVFGLVEMALFMLTVFVAYAYVW 111


                  ....*..
gi 1812385374 109 IQGMLKW 115
Cdd:PRK07928  112 RRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 3.81e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.51  E-value: 3.81e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTVFIATLLIGLYYEWIQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-FALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1812385374 112 MLKW 115
Cdd:PRK07756  118 VLQW 121
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-115 3.90e-05

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 39.97  E-value: 3.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  34 EKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTVFIATLLIGLYYEWIQGML 113
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-SAFIEALIFVLILIVGLVYAWRKGAL 117


                  ..
gi 1812385374 114 KW 115
Cdd:CHL00022  118 EW 119
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 1.60e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 38.64  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTVFIATLLIGLYYEWIQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGL-IPFIETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1812385374 112 MLKW 115
Cdd:PRK06432  139 YMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 30-115 9.40e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.03  E-value: 9.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374  30 IFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITimkNSNLNYWWLSTTVFIATLLIGLYYEWI 109
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF---QGLLFYNFWYYYFFLLLLFLGFVVELF 108


                  ....*.
gi 1812385374 110 QGMLKW 115
Cdd:MTH00060  109 SGYVRW 114
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.05e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 36.03  E-value: 1.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385374   1 MYSLLTTMAVTLSIILLMTILSKMISQKLiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1812385374  81 MKNSNLNYWwlsttVFIATLLIGLYYEWIQGMLKW 115
Cdd:MTH00092   80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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