|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-572 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 576.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 2 LNIFYVFCLLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 82 DLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 162 FGSWNYIYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMIL- 240
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSs 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 241 NCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLL 320
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 321 DHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSL 400
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 401 INNFNFSVLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFNVY 480
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 481 NN-INYVNIKNFMGYMWFMPFLSTKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYVML 559
Cdd:MTH00165 481 LKsLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1812385375 560 FFSLIIVYIFLSL 572
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
8-571 |
6.32e-159 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 465.86 E-value: 6.32e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 8 FCLLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSR 87
Cdd:MTH00151 7 SSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 88 FVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLNFGSWNY 167
Cdd:MTH00151 87 FMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 168 IYYYDYFYCsydySLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNY--Y 245
Cdd:MTH00151 167 LSMWDFKLS----GWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFssF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 246 MLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDI 325
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 326 RYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFN 405
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMK 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 406 FSVLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFinlFNFNVYNNINY 485
Cdd:MTH00151 403 SSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFG---FWDSGFSSSKM 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 486 VNIKNFMGYMWFMPFLSTKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYVMLFFSLII 565
Cdd:MTH00151 480 VKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVL 559
|
....*.
gi 1812385375 566 VYIFLS 571
Cdd:MTH00151 560 FLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
10-570 |
2.48e-151 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 446.40 E-value: 2.48e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 10 LLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFV 89
Cdd:MTH00209 7 FSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 90 LLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLNFGSWNYIY 169
Cdd:MTH00209 87 LLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 170 YYDYFYCSydySLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPL--MILNCNYYML 247
Cdd:MTH00209 167 LNFNSNLG---SVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSlfSSPFFSMSLL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 248 FIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRY 327
Cdd:MTH00209 244 LLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRM 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 328 MGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFNFS 407
Cdd:MTH00209 324 VGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSK 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 408 VLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFnvyNNINYVN 487
Cdd:MTH00209 404 SLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF---FLIKGYK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 488 IKNFMGYMWFMPFLSTKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYVMLFFSLIIVY 567
Cdd:MTH00209 481 VNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGV 560
|
...
gi 1812385375 568 IFL 570
Cdd:MTH00209 561 ILF 563
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
2.53e-148 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 438.81 E-value: 2.53e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 1 MLNIFYVFCLLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMA 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 81 GDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 161 NFGSWNYIYYYDYFYCsydySLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLM-- 238
Cdd:MTH00207 163 NQGHWSITNMWQTDMN----NYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLss 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 239 ILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHG 318
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 319 LLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYY 398
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 399 SLINNFNFSVLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFN 478
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNIT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 479 VYNNINYV-NIKNFMGYMWFMPFLSTKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYV 557
Cdd:MTH00207 479 KTPLLINNpLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL 558
|
570
....*....|...
gi 1812385375 558 MLFFSLIIVYIFL 570
Cdd:MTH00207 559 MMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
14-572 |
1.21e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 327.29 E-value: 1.21e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 14 ISGFVSFSMGLYMLLFDFSF-MIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLV 92
Cdd:MTH00211 37 LSFFISLIPLLIFLDQGLETiLTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 93 MMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALT-NRVGDVFILMSISWML-NFGSWNYIYY 170
Cdd:MTH00211 117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEISQL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 171 YDYFYCSYDYSLicyLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILN--CNYYMLF 248
Cdd:MTH00211 197 FILNLDLTLFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNqlILGAVLL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 249 IGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYM 328
Cdd:MTH00211 274 LGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 329 GSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFNFSV 408
Cdd:MTH00211 354 GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 409 LRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPI-PSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFNVYNNINYvn 487
Cdd:MTH00211 434 LSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTL-- 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 488 ikNFMGYMWFMPFLSTKFMSISFLRGGAAYS-YVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYVMLFFSLIIV 566
Cdd:MTH00211 512 --SFSNMLGYYPPIIHRLLPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLL 589
|
....*.
gi 1812385375 567 YIFLSL 572
Cdd:MTH00211 590 ILLLFL 595
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
32-403 |
4.74e-89 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 286.67 E-value: 4.74e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 32 SFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISI 111
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 112 LLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALT-NRVGDVFILMSISWM-LNFGSWNYIYYYDYFYCSYDYSLicyLVML 189
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWEIQQLFSPTQTPTLPLL---GLIL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 190 AAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPlmILNCNYYM----LFIGCLTMLMSGLVANYEF 265
Cdd:MTH00004 218 AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHP--LLQNNQTAlticLCLGALTTLFAATCALTQN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 266 DLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVA 345
Cdd:MTH00004 296 DIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIG 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385375 346 NLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINN 403
Cdd:MTH00004 376 NLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGF 433
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-397 |
2.31e-86 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 279.73 E-value: 2.31e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 49 MAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 128 YYQNIKSFNAGMLTALTNRVGDVFILMSISWMLN-FGSWNY---IYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAW 203
Cdd:COG1009 154 WYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 204 LPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILN--CNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGL 281
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSpvWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 282 MMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDhQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSS 361
Cdd:COG1009 314 MFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSK 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 1812385375 362 DLILEVC-SLDELNIIIYLMFYISTGLTAMYSIRLFY 397
Cdd:COG1009 393 EAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
10-572 |
1.96e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 278.01 E-value: 1.96e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 10 LLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLNSSvilmaFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFV 89
Cdd:MTH00208 67 FLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLS-----FIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 90 LLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTA-LTNRVGDVFILMSISW-MLNFGSWNY 167
Cdd:MTH00208 142 RLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 168 IYYYDYFYCSYDYSLICYL-VMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLM--ILNCNY 244
Cdd:MTH00208 222 NEILSLNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIsnSPWFLS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 245 YMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQD 324
Cdd:MTH00208 302 LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQD 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 325 IRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNF 404
Cdd:MTH00208 382 LRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNP 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 405 NFSVLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFNVYNNIN 484
Cdd:MTH00208 462 SFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNF 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 485 YvnikNFMGYMWFMPFLS-TKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFDYNFKSYVMLFFSL 563
Cdd:MTH00208 542 F----SFLSNQWFFVNIShSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLL 617
|
....*....
gi 1812385375 564 IIVYIFLSL 572
Cdd:MTH00208 618 FLLILTLSL 626
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
6-396 |
1.74e-78 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 259.32 E-value: 1.74e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 6 YVFCLLLFISGFVSFSMGLYMLLFDFSFMIE--WEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDL 83
Cdd:PRK06590 33 LVGTGLVGLSALLSLVVFFDFLLGGGRAFSQtlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 84 TKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSISWML-N 161
Cdd:PRK06590 113 GYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 162 FGSWNYIYYYDYFYCSYDYS-----LICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:PRK06590 193 FGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 237 LMILNCN--YYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMgiLSLGFPMLSF--FHLLIHALFKALLFLCA 312
Cdd:PRK06590 273 LFELSPEalLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMF--LALGVGAYAAaiFHLMTHAFFKALLFLGA 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 313 GCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVcSLDELNIIIYLMFYISTGLTAMYS 392
Cdd:PRK06590 351 GSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYS 429
|
....
gi 1812385375 393 IRLF 396
Cdd:PRK06590 430 FRLI 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
32-403 |
1.98e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 258.68 E-value: 1.98e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 32 SFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISI 111
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 112 LLGWDGLGLVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSISW-MLNFGSWNY--IYYYDYFYCSYDYSLIcylv 187
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELqqIFLLNDNSTLPLLGLI---- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 188 mLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYM--LFIGCLTMLMSGLVANYEF 265
Cdd:MTH00066 215 -LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTicLCLGALTTLFTAACALTQN 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 266 DLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVA 345
Cdd:MTH00066 294 DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIG 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385375 346 NLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINN 403
Cdd:MTH00066 374 SLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKF 431
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
6-397 |
6.10e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 257.60 E-value: 6.10e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 6 YVFCLLLFISGFVSFSMGLYMLLFDFSFMIE---WEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGD 82
Cdd:TIGR01974 31 IIGIGSVGLSAALSAFVFVDFFLNGEGEAFTqslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHD 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 83 LTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLN 161
Cdd:TIGR01974 111 EGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFW 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 162 -FGSWNY--IYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLM 238
Cdd:TIGR01974 191 yFGTLNFqeVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 239 IL--NCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYI 316
Cdd:TIGR01974 271 ELspTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVI 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 317 HGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLF 396
Cdd:TIGR01974 351 HAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLI 430
|
.
gi 1812385375 397 Y 397
Cdd:TIGR01974 431 F 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-409 |
5.38e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 252.47 E-value: 5.38e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 37 WEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWD 116
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 117 GLGLVSYCLVIYYQNIKSFNAGMLTA-LTNRVGDVFILMSISW-MLNFGSWNYIYYYDYFYCSYDYSLICYLvmLAAMTK 194
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLQQIFMLNPNNSNLPLMGLL--LAATGK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 195 SAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILN--CNYYMLFIGCLTMLMSGLVANYEFDLKKIIA 272
Cdd:MTH00108 224 SAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNktIQTLTLCLGAITTLFTAICALTQNDIKKIVA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 273 LSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGF 352
Cdd:MTH00108 304 FSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385375 353 PFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFNFSVL 409
Cdd:MTH00108 384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPL 440
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
47-398 |
1.92e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 243.20 E-value: 1.92e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 47 ILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV 126
Cdd:MTH00137 80 INISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLI 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 127 IYYQNIKSFNAGMLTA-LTNRVGDVFILMSISWML-NFGSWNYIYYYDYF----YCSYDYSLIcylvmLAAMTKSAQIPF 200
Cdd:MTH00137 160 GWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIQQIFALSkdfdLTLPLLGLI-----LAATGKSAQFGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 201 SAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILN------CnyymLFIGCLTMLMSGLVANYEFDLKKIIALS 274
Cdd:MTH00137 235 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNqtalttC----LCLGALTTLFTATCALTQNDIKKIVAFS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 275 TLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPF 354
Cdd:MTH00137 311 TSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPF 390
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1812385375 355 LSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYY 398
Cdd:MTH00137 391 LAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFF 434
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
42-405 |
2.00e-69 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 234.97 E-value: 2.00e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 42 LNSSVILMAFILDWMSL--IFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLG 119
Cdd:MTH00020 65 LDSDLLTVYFGLQFDGLvaIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 120 LVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLN-FGS--WNYIYYYDYFYCSYDYSLICYLVMLAAMTKS 195
Cdd:MTH00020 145 LCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSldFSSVFNMVVSAPSSDITLICLFLFIGAVGKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 196 AQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYML--FIGCLTMLMSGLVANYEFDLKKIIAL 273
Cdd:MTH00020 225 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIvtIVGSLTVFFAATVGLVQNDLKKVIAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 274 STLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFP 353
Cdd:MTH00020 305 STCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1812385375 354 FLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFN 405
Cdd:MTH00020 385 YLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTN 436
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
61-405 |
2.07e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 221.81 E-value: 2.07e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 61 MGFVLM-ISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-IYYQNIKSFNAG 138
Cdd:MTH00210 85 MLIVITsVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAA 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 139 MLTALTNRVGDVFILMSISWMLN-FGSWNYIYYYDYFYCSY---DYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPV 214
Cdd:MTH00210 165 IKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNInkeSLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 215 SALVHSSTLVTAGVYLLIRFSPL-----MILNcnyYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLG 289
Cdd:MTH00210 245 SALIHAATMVTAGVFLIIRSGPLfegspLALT---IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 290 FPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCS 369
Cdd:MTH00210 322 NYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTY 401
|
330 340 350
....*....|....*....|....*....|....*.
gi 1812385375 370 LDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFN 405
Cdd:MTH00210 402 DKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
12-397 |
9.73e-63 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 218.35 E-value: 9.73e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 12 LFISGFVSFSMGL-YMLLFD-------FSFMIEWEiySLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDL 83
Cdd:PRK07376 42 VLLISLVGAAAVLsYALLWSqiqghepYERLFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDP 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 84 TKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSI---SWM 159
Cdd:PRK07376 120 GYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 160 LNFGSWNYI------YYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:PRK07376 200 TGSFDFDGIadrlseLVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVAR 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 234 FSPLM--ILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLC 311
Cdd:PRK07376 280 MYPVFeqFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLG 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 312 AGCYIHGLLD--------HQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEvcSLDELNIIIYLMFYI 383
Cdd:PRK07376 360 SGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILG--AAFEANPALWFVGFL 437
|
410
....*....|....
gi 1812385375 384 STGLTAMYSIRLFY 397
Cdd:PRK07376 438 TAGMTAFYMFRMYF 451
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
17-510 |
6.20e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 191.28 E-value: 6.20e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 17 FVSFSMGLYMLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFV 96
Cdd:MTH00095 7 LILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 97 LSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLNFGswnyiyyYDYFYC 176
Cdd:MTH00095 87 GSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 177 SYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFS-PLMILNCNYYMLFIGCLTML 255
Cdd:MTH00095 160 SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSyLILNMNVMKIMLLIGLFTMF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 256 MSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLM 335
Cdd:MTH00095 240 FSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 336 PYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLfYYSLINNFNFSVLrdFNNS 415
Cdd:MTH00095 320 MFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRL-WKSFFLSFSKVVN--VYSS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 416 GNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGYFINLFNFNVYNNINYVNIKNFMGYM 495
Cdd:MTH00095 397 SVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKL 476
|
490
....*....|....*
gi 1812385375 496 WFMPFLSTKFMSISF 510
Cdd:MTH00095 477 KNLKFFDLFLNKFGY 491
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-367 |
4.98e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 174.76 E-value: 4.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 38 EIYSLNSSVILMAFI---LDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLG 114
Cdd:MTH00032 60 ELYKWIESEIFITHIgllYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 115 WDGLGLVSYCLVIYYQN-IKSFNAGMLTALTNRVGDVFILMSISWM------LNFGSWN------------YIYYYDYFY 175
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNggsvgsgimdrgYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 176 CSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMiLNCNYYMLFI---GCL 252
Cdd:MTH00032 220 PLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLF-EKAPLTLLIItifGAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 253 TMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSL-GFPMLSFFHLLIHALFKALLFLCAGCYIHGL-LDHQDIRYMGS 330
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGG 378
|
330 340 350
....*....|....*....|....*....|....*..
gi 1812385375 331 LVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEV 367
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-395 |
1.79e-46 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 175.23 E-value: 1.79e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 43 NSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 123 YCLVIyyQNIKSFNAG-MLTALTNRVGDVFILM------------SISWMLNFGSWnyiyyydyFYCSYDYSLICYLVML 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVW--------AEKPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 190 AAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYMLFIGC--LTMLMSGLVANYEFDL 267
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVgmITALMGAVFAVQKTDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 268 KKIIALSTLSQLGLMMGILSLGFPM---LSFFHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKLMPYSSV 340
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLI-----GVVDHQagtrDIRRLGSLWRRMPFTFV 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385375 341 CFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAM----YSIRL 395
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARL 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-366 |
2.69e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 161.71 E-value: 2.69e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 105 SPNLISILLGWDGLGLVSYCLVIYY-QNIKSFNAGMLTALTNRVGDVFILMSISWMLNFGSW----NYIYYYDYFYCSYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 180 YSLICYLVMLAAMTKSAQIPFSAWLPAA-MSAPTPVSALVhSSTLVTAGVYLLIRFSPLMIL---NCNYYMLFIGCLTML 255
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 256 MSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFP---MLSFFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLV 332
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....
gi 1812385375 333 KLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILE 366
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-398 |
3.10e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 159.93 E-value: 3.10e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 130 QNIKSFNAGMLTALTNRVGDVFILMSISWM-LNFGSWNY--IYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPA 206
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 207 AMS-APTPVSALVhSSTLVTAGVYLLIR-----FSPLMILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLG 280
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRvltllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 281 LMMGILSLGFPML---SFFHLLIHALFKALLFLCAGCYIHGlLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSG 357
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1812385375 358 FYSSDLILEVcSLDELNIIIYLMFYISTGLTAMYSIRLFYY 398
Cdd:COG0651 389 FVSKWLLLQA-ALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-366 |
5.62e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 161.24 E-value: 5.62e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 51 FILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNH 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 131 NIKSFNAGMLTALTNRVGD------VFILM-------SISWMLNFGSwnyiyyydYFYCSYDYSLICYLVMLAAMTKSAQ 197
Cdd:PRK12647 140 EREAARRAALQALLVTGGGglallaGLILLgnvtgtySLSELLASGD--------VIREHPLYLAILLLVLGGAFTKSAQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 198 IPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNC--NYYMLFIGCLTMLMSGLVANYEFDLKKIIALST 275
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPlwQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 276 LSQLGLMMGILSLGFP---MLSFFHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKLMPYSSVCFNVANLS 348
Cdd:PRK12647 292 VSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVA-----GIIDHEtgtrDITKLGGLRRAMPITAAAALLAALS 366
|
330
....*....|....*...
gi 1812385375 349 LCGFPFLSGFYSSDLILE 366
Cdd:PRK12647 367 MAGLPPLFGFLAKELIYE 384
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-394 |
3.37e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 159.58 E-value: 3.37e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 130 QNIKSFNAGMLTALT-------NRVGDVFILMSISwmlnfGSWNYIYYYDYFYCSYDYSL---ICYLVMLAAMTKSAQIP 199
Cdd:PRK12648 151 HHRADARRGARMALTvtgagglALLAGVLLLGHIV-----GSYDLDVVLAAGDLIRAHPLyppALVLILLGAFTKSAQFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 200 FSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYML--FIGCLTMLMSGLVANYEFDLKKIIALSTLS 277
Cdd:PRK12648 226 FHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIvgGAGLITLLLGAYFALFQHDLKGLLAYSTIS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 278 QLGLMMGILSLGFPM---LSFFHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKLMPYSSVCFNVANLSLC 350
Cdd:PRK12648 306 HLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAA-----GIIDHEtgtrDMRRLSGLRRLMPITATLAMVAAAAMA 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1812385375 351 GFPFLSGFYSSDL----ILEVCSLDELNIIIYLMFYISTGLTAMYSIR 394
Cdd:PRK12648 381 GVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
10-396 |
4.53e-39 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 152.35 E-value: 4.53e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 10 LLLFISGFVSFSMGLYMLLFDFSFMIEWEiYSLNSSVIL-MAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRF 88
Cdd:CHL00025 46 LLLSIVMIFSLNLSIQQINGSSIYQYLWS-WTINNDFSLeFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 89 VLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-IYYQNIKSFNAGMLTALTNRVGDVFILMSIS---WMLnfGS 164
Cdd:CHL00025 125 FAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GS 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 165 WNYIYYYDYF--------YCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:CHL00025 203 FEFRDLFEIFnnliynneVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 237 LMILnCNYYMLFI---GCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAG 313
Cdd:CHL00025 283 LFIV-IPYIMNLIsliGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 314 CYIHGL--------LDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLdeLNIIIYLMFYIST 385
Cdd:CHL00025 362 SVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAWSTA 439
|
410
....*....|.
gi 1812385375 386 GLTAMYSIRLF 396
Cdd:CHL00025 440 GLTAFYMFRIY 450
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
47-400 |
8.32e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.22 E-value: 8.32e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 47 ILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTK-SRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNlPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 126 VIYYQN--------IKSFNAGMLTALTNRVGDVfILMSISWMLNFGSWNYIYYYDYFYCSYDYSLICYLvmLAAMTKSAQ 197
Cdd:PRK12646 150 ISYWYNngdsqfgaIQSFMITVFGGLALLVGFI-MLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFL--LGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 198 IPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCN--YYMLFIGCLTMLMSGLVANYEFDLKKIIALST 275
Cdd:PRK12646 227 FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyiYIVTFVGLITMLFGSITALKQWDLKGILAYST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 276 LSQLGLMMGILSLG--------------FPMLSF---FHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKL 334
Cdd:PRK12646 307 ISQLGMIMAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGV-----GIIDHEagtrDIRILSGMRQL 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385375 335 MPYSSVCFNVANLSLCGFPFLSGFYSSDLILE-VCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSL 400
Cdd:PRK12646 382 FPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYAL 448
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-366 |
6.13e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 149.69 E-value: 6.13e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTK-SRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRlGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 129 YQNIKS-----FNAGMLTA---LTNRVGdvFILMSISwmlnFGSWNYIYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPF 200
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTaggLAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 201 SAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLM--ILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQ 278
Cdd:PRK12644 223 HFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFadVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQ 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 279 LGLMMGILSLGFP--MLSFFHLLI-HALFKALLFLcagcyIHGLLDHQ----DIRYMGSLVKLMPYSSVCFNVANLSLCG 351
Cdd:PRK12644 303 LGFLTVLVGIGTRdaALAGLAMLLaHALFKAALFL-----VVGIIDHStgtrDIRKLSGLGRRQPVLAVVAALAAASMAG 377
|
330
....*....|....*
gi 1812385375 352 FPFLSGFYSSDLILE 366
Cdd:PRK12644 378 LPPLLGFVAKEAALE 392
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
53-397 |
3.40e-37 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 147.30 E-value: 3.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 53 LDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 131
Cdd:TIGR00940 73 MDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhHR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 132 IKSFNAGMLTALTNRVGDVFILMSISWM-LNFGSWNYIYYYDYFYCSYDYSLICY---LVMLAAMTKSAQIPFSAWLPAA 207
Cdd:TIGR00940 153 AHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIASADAIRNSPLFGTamvLVLLGAFTKSAQFPFHIWLPDA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 208 MSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYML--FIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGI 285
Cdd:TIGR00940 233 MEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIvgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 286 LSLGFPMLSF----------------FHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKLMPYSSVCFNVA 345
Cdd:TIGR00940 313 LGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAA-----GIIDHEtgtrDIRKLGGLFHIMPITFTLAMIA 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1812385375 346 NLSLCGFPFLSGFYSSDLILE---------VCSLDELNIIIYLMFYISTGLTAMYSIRLFY 397
Cdd:TIGR00940 388 SAAMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIH 448
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
7-422 |
9.56e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 143.48 E-value: 9.56e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 7 VFCLLLFISGFVSFSMglymLLFDFSFMIEWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKS 86
Cdd:MTH00063 1 SVLLVSLLLCLLIFFL----FLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 87 RFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDV--FILMSISWMLNFGS 164
Cdd:MTH00063 77 LLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVclFLLIGLSCWGGSGS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 165 wnyiyyydyfycsydySLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNY 244
Cdd:MTH00063 157 ----------------FLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLS 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 245 YMLFIGC-LTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGLLDHQ 323
Cdd:MTH00063 221 IFFSVLLlLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQ 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 324 DIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLF--YYSLI 401
Cdd:MTH00063 301 SSNCVYSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCliLFGVK 380
|
410 420
....*....|....*....|.
gi 1812385375 402 NNFNFSVLRDFNNSGNSMYLG 422
Cdd:MTH00063 381 SSLSSGVRFLFFNSGLMVFLW 401
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
10-365 |
2.56e-33 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 132.79 E-value: 2.56e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 10 LLLFISGFVSFSMGLYMLLFDFSFMIEWEIYSLN-SSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMA-------G 81
Cdd:PRK06525 29 LGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNlGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpV 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 82 DLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMln 161
Cdd:PRK06525 109 HEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL-- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 162 FGSWNYIYYYDYFYCSYDYSLICYL-VMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFsplmIL 240
Cdd:PRK06525 187 FLQTGTFALSALSGLHGSLKYLVFLgILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA----IQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 241 NCN-------YYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLM---MGILSLGFPM---LSFFHLLIHALFKAL 307
Cdd:PRK06525 263 SMGpiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMffgLSLAILGSRLaleGSIAYIFNHAFAKSL 342
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 308 LFLCAGC--YIHGLLDHQDIRymgSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLIL 365
Cdd:PRK06525 343 FFLVAGAlsYSCGTRLLPRLR---GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
53-409 |
1.25e-32 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 133.51 E-value: 1.25e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 53 LDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTK-SRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 132 IKSFNAGMLTALTNRVGDV------FILMSISwmlnFGSWNYIYYYDYFYCSYDYSLICY---LVMLAAMTKSAQIPFSA 202
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGlsmlggFILLYIM----TGSFSIREMIANADEIQNSPLFIPamiLILLGAFTKSAQFPFYI 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 203 WLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYMLF--IGCLTMLMSGLVANYEFDLKKIIALSTLSQLG 280
Cdd:PRK12645 232 WLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtlVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 281 LMMGILSLGFPMLSF----------------FHLLIHALFKALLFLCAgcyihGLLDHQ----DIRYMGSLVKLMPYSSV 340
Cdd:PRK12645 312 LIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIV-----GIVDHEtgtrDIRKLGGLMTIMPITFT 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385375 341 CFNVANLSLCGFPFLSGFYSSDLILE---------VCSLDELNIIIYLMFYISTGLTAMYSIRLFYYSLINNFNFSVL 409
Cdd:PRK12645 387 IALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQL 464
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-366 |
7.03e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 128.02 E-value: 7.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 49 MAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12649 74 FSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 129 YQNIKSFNAGMLTALTNRVGDVFILMSISWMLNF--GSWNYIYYYDYFYCSYDYS------LICYLVMLAAMTKSAQIPF 200
Cdd:PRK12649 154 WRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVitGTYDIATILQDSELIENIKghplflITLILIFIGAAAKSAQGPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 201 SAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPLMILNCNYYMLF--IGCLTMLMSGLVANYEFDLKKIIALSTLSQ 278
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 279 LGLMM---GILSLGFPMLSF----FHLLIHALFKALLFLCAGCYIHGLLDhQDIRYMGSLVKLMPYSSVCFNVANLSLCG 351
Cdd:PRK12649 314 LAYLMtmyGYTTYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMAG 392
|
330
....*....|....*
gi 1812385375 352 FPFLSGFYSSDLILE 366
Cdd:PRK12649 393 IPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-398 |
8.40e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 122.68 E-value: 8.40e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSndYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 130 QNIKSFNAGMLTALTNRVGDVFILMSISWMLNF-GSWNYIYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAM 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 209 SAPTPVSALVHSSTLVTAGVYLLIRFSPLMI-------LNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLG- 280
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVFggdfrfaLGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGy 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 281 --LMMGILSLGFPMLSFFHLLIHALFKALLFLCAGC--YIHGlldHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLS 356
Cdd:PRK08375 310 ilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAieVTYG---TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1812385375 357 GFYSSDLILeVCSLDELNIIIYLMFYISTGLTAMYSIRLFYY 398
Cdd:PRK08375 387 GFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
49-366 |
3.92e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.90 E-value: 3.92e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 49 MAFILDWMSLIFMGFVLMISFTVLFYS---NDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 126 VIY-YQNIKSFNAGMLTALTNRVGDVFI-LMSISWMLNFGSWNYIYYYDYFYCSydySLICYLVMLAAMTKSAQIPFSAW 203
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFELSPLGASAGIL---SLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 204 LPAAMSA-PTPVSALVhSSTLVTAGVYLLIRF-----SPLMILNcnYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLS 277
Cdd:PRK08667 228 LPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFlmdvlSPELWWG--VLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 278 QLGLMMGILSL-------GFPMLSF-------FHLLIHALFKALLFLCAGCYIHGLLDhQDIRYMGSLVKLMPYSSVCFN 343
Cdd:PRK08667 305 NIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 1812385375 344 VANLSLCGFPFLSGFYSSDLILE 366
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-313 |
3.15e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.32 E-value: 3.15e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 56 MSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKsf 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 136 nAGMLTA----LTNRVGDVFILMSIS-WMLNFGSWNYIYYYDYFYCSYDYSLI---CYLVMLAAMTKSAQIPFSAWLPAA 207
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAQGASPSLqaaALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 208 MSAPTPVSALVHSStLVTAGVYLLIRFSPLMILN--CNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGI 285
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAppARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 1812385375 286 LSLGFPMLSFFHLLIHALFKALLFLCAG 313
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
143-360 |
1.69e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 101.53 E-value: 1.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 143 LTNRVGDVFILMSISWMLNF-GSWNYIYYYDYFYCSYDYSLICYLVMLA----AMTKSAQIPFSAWLPAAMSAPTPVSAL 217
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 218 vHSSTLVTAGVYLLIRFSPLMILN--CNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSF 295
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSpvALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385375 296 FHLLIHALFKALLFLCAGCYIHGLLDhQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYS 360
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-365 |
2.43e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 101.12 E-value: 2.43e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 94 MFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKS-FNAGMLTALTNRVGDVFILMSISWML-NFGSWNYIYYY 171
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 172 DYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPAAM-SAPTPVSALVhSSTLVTAGVYLLIRFS----PLMILNCNYYM 246
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllGAPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 247 LFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLM-MGI------LSLGFPMLS-------FFHLLIHALFKALLFLCA 312
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfVGLglamvfIAYGMPLLAalaltaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1812385375 313 GCYIHGLLDHqDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLIL 365
Cdd:PRK06521 360 GAVLHATGTR-DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-397 |
7.31e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 92.96 E-value: 7.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 51 FILDWMSLIFMGFVLMISFTVLFYSNDYMAGDL--TKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 129 YQNIKSFNAGM--LTALTNrvgDVFILMSISWMLNFGSWNYIYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLPA 206
Cdd:PRK06589 159 TRNNISLSGGYkyLKILMI---SALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 207 AMSAPTPVSALVHSSTLVTAGVYLLIRFSPL--------MILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQ 278
Cdd:PRK06589 236 AMVAHYPVSALLHAVIVVKTGLFCIYKILLYifglsylqRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 279 LGLMMGILSLGFPM---LSFFHLLIHALFKALLFLCAGCyIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFL 355
Cdd:PRK06589 316 LSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIF 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1812385375 356 SGFYSSDLILEVCSLDE---LNIIIYLMFYISTGLTAMYSIRLFY 397
Cdd:PRK06589 395 SGFISKFLILLAASEQNqpwLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-397 |
1.30e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 92.08 E-value: 1.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 47 ILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV 126
Cdd:PRK08376 82 IRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALV 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 127 IYYQNI-KSFNAGMLTALTNRVGDVFILMSISwmLNFGSWNYIYYYDYFYCSYDYSLICYLVMLAAMT-----KSAQIPF 200
Cdd:PRK08376 162 AFRNDTwEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIaglamKSGAVPV 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 201 SAWLPAAMS-APTPVSALVHSSTLvtAGVYLLIR-----FSPLMILN-CNYYMLFIGCLTMLMSGLVANYEFDLKKIIAL 273
Cdd:PRK08376 240 HMWLPDAYPaAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLAtVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 274 STLSQLGLMM-----GILSLGFPMLS----------FFHLLIHALFKALLFLCAGCYIHgLLDHQDIRYMGSLVKLMPYS 338
Cdd:PRK08376 318 HSVSQIGYMLlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKT 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385375 339 SVCFNVANLSLCGFPFLSGFYSSDLILEvcSLDELNIIIYLMFYISTGLTAMYSIRLFY 397
Cdd:PRK08376 397 TIAFLIGAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFH 453
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
391-570 |
2.53e-19 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 85.68 E-value: 2.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 391 YSIRLFYYSLINNFNFSVLRDFNNSGNSMYLGMLILLMLVILGGSTMSWLLFPIPSCIYLPLSLKLLTLMVVLIGLYLGY 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 471 FINLFNFNVYNNINYVNIKNFMGYMWFMPFLSTKFMSISFLRGGAAYSYVMDYGWFEYYGAGGIYGFMKYFIEGYLYLFD 550
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|
gi 1812385375 551 YNFKSYVMLFFSLIIVYIFL 570
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLL 180
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-397 |
2.87e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 91.19 E-value: 2.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 51 FILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 131 NIK-SFNAGMLTALTNRVGDVFILMSISWM------LNF--------GSWNYIYYYDYFYCSYDYSLICYLVMLAAMTKS 195
Cdd:PRK12667 158 DRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 196 AQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFSpLMILNCNYY-----------MLFIGCLTMLMSGLVANY 263
Cdd:PRK12667 238 AIFPNHFWLPDAHPaAPSPVSAML-SGLVVNVGAYAIIRFL-YTIFGISPSlidfraalspiLIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 264 EFDLKKIIALSTLSQLGLMMGILSLGFPML---SFFHLLIHALFKALLFLCAGCYIHgLLDHQDIRYMGSLVKLMPYSSV 340
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385375 341 CFNVANLSLCGFPFLSGFYSSDLILEvcSLDELNIIIY-LMFYISTGLTAMYSIRLFY 397
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFN--ALLESGFYLPaLVLLIASAISLVGYFRAWY 450
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-366 |
1.88e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 81.92 E-value: 1.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSpLMILNCNYYMLFIGCLTMLMSGLVANYEF 265
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-LDVPGLDLIVRIFGVGTALLGVLFALLEK 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 266 DLKKIIALSTLSQLGLMmgilsLGFPMLSFFHLLIHALFKALLFLCAGCyIHGLLDHQDIRYMGSLVKLMPYSsvcfnVA 345
Cdd:PRK07234 268 DLKRMLAFSTISQLGFI-----LAAPLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-----MA 336
|
170 180
....*....|....*....|.
gi 1812385375 346 NLSLCGFPFLSGFYSSDLILE 366
Cdd:PRK07234 337 SFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
18-397 |
9.63e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.43 E-value: 9.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 18 VSFSMGLYMLLFDFSFMI-EWEIYSLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDltKSRFVLLVMMFV 96
Cdd:PRK08668 31 GNALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKN--DAYFNMFALMSL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 97 LSMLFLIISPNLISILLGWDGLGLVSYcLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLN-FGSWNYIYYYDYFY 175
Cdd:PRK08668 109 AGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 176 CS--YDYSLICYLVMLAA-MTKSAQIPFSAWLPAAMS-APTPVSAlVHSSTLVTAGVY-LLIRFSPLMILNC-------- 242
Cdd:PRK08668 188 NDtsTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYgFLLVLYVLPGTKLfsefgtyr 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 243 -----NYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPML---SFFHLLIHALFKALLFLCAGC 314
Cdd:PRK08668 267 gvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 315 YIHgLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGlTAMYSIR 394
Cdd:PRK08668 347 VIY-RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG-SFLYVFR 424
|
...
gi 1812385375 395 LFY 397
Cdd:PRK08668 425 PLA 427
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-398 |
4.74e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 78.01 E-value: 4.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 108 LISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISW-MLNFGSWnyiyyyDYFYCSYDYSLICYL 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 187 VMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSPlmilnCNYYMLFIGCLTMLMSGLVANYEFD 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-----GTELLIYIGAAMAVYGVFFALLEND 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 267 LKKIIALSTLSQLGLMMGILSLGFPML---SFFHLLIHALFKALLFLCAGCYIHgLLDHQDIRYMGSLVKLMPYSSVCFN 343
Cdd:PRK12668 264 LRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFCL 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1812385375 344 VANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIYLMFYISTGLTAMYSIRLFYY 398
Cdd:PRK12668 343 VGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYF 397
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
186-313 |
1.15e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 76.61 E-value: 1.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSStLVTAGVYLLIRFSPL-------MILncnyymLFIGCLTMLMSG 258
Cdd:PRK08601 209 LLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLfhddiaqILL------LIFASISVLIGT 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1812385375 259 LVANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSFFHLLIHALFKALLFLCAG 313
Cdd:PRK08601 282 GISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-360 |
3.57e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 71.69 E-value: 3.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSNDYMAG-DLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 128 YYQNIKSFNAGMLTALTNRVGDVFILMSISWMLNF-GSWNYIYYYDYFYCSYDYSLICYLV---MLAAMT-KSAQIPFSA 202
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPLLLLGlvlVLAGLAfKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 203 WLP-AAMSAPTPVSALVhsSTLV-TAGVYLLIRF----SPLMILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTL 276
Cdd:COG1007 225 WTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 277 SQLG-LMMGILSLGFPMLS--FFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFP 353
Cdd:COG1007 303 AHAGyLLLGLAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
....*..
gi 1812385375 354 FLSGFYS 360
Cdd:COG1007 383 PTAGFFG 389
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
186-396 |
1.07e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 70.50 E-value: 1.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSAWLP-AAMSAPTPVSALvHSSTLVTAGVYLLIRFS----PLMILNCNYYMLFIGCLTMLMSGLV 260
Cdd:COG1008 214 AFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlplfPEASAYFAPLLAALGVIGIIYGALV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 261 ANYEFDLKKIIALSTLSQLGLM-MGILSLGFPMLS--FFHLLIHALFKALLFLCAGcYIHGLLDHQDIRYMGSLVKLMPY 337
Cdd:COG1008 293 ALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLQgaVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPV 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385375 338 SSVCFNVANLSLCGFPFLSGFYSSDLILEvcSLDELNIIIYLMFYISTGLTAMYSIRLF 396
Cdd:COG1008 372 LAALFLLAALASLGLPGTSGFVGEFLVLL--GAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
186-395 |
2.34e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.41 E-value: 2.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSAWLPAA-MSAPTPVSALVhSSTLVTAGVYLLIRFSPLMILNCNY-----YMLFIGCLTMLMSGL 259
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWssvlkLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 260 VANYEFDLKKIIALSTLSQLGLMMGILSLGFPM---LSFFHLLIHALFKALLFLCAGcYIHGLLDHQDIRYMGSLVKLMP 336
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG-YVGITLGGTEIEKFEGLGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385375 337 YSSVCFNVANLSLCGFPFLSGFYSSDLILeVCSLDELNIIIYLMFYISTGLTAMYSIRL 395
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-399 |
2.67e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.13 E-value: 2.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 193 TKSAQIPFSAWLPAAMSAP-TPVSALVhSSTLVTAGVYLLIRFSPLMILN----CNYYMLFIGCLTMLMSGLVANYEFDL 267
Cdd:PRK07691 221 TKAGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHdtsfTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 268 KKIIALSTLSQLGLMMGILSLGFP---MLSFFHLLIHALFKALLFLCAGCYIHgLLDHQDIRYMGSLVKLMPYSSVCFNV 344
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1812385375 345 ANLSLCGFPFLSGFYSSDLILEvCSLDELNIIIYLMFYISTGLTAMYSIRLFYYS 399
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKG 432
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-358 |
6.04e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 65.23 E-value: 6.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 198 IPFSAWLPAA-MSAPTPVSALVhSSTLVTAGVYLLIRFSPL---MILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIAL 273
Cdd:PRK08042 197 IPLHGWVPQAhANASAPAAALF-STVVMKIGLLGILTLSLLggnAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 274 STLSQLGL-MMGI------LSLGFPML-------SFFHLLIHALFKALLFLCAGCYIHgLLDHQDIRYMGSLVKLMPYSS 339
Cdd:PRK08042 276 HTLENIGIiLLGLgagvtgIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1812385375 340 VCFNVANLSLCGFPFLSGF 358
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
186-399 |
2.20e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 63.05 E-value: 2.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSaWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFSpLMILN-----CNYYMLFIGCLTMLMSGLV 260
Cdd:PRK12663 212 LFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF-TLLFPqerelLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 261 ANYEFDLKKIIALSTLSQLGLMMGILSLGFPML---SFFHLLIHALFKALLFLCAGCYIhGLLDHQDIRYMGSLVKLMPY 337
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385375 338 SSVCFNVANLSLCGFPFLSGFYSSDLILEvCSLDELNIIIYLMFYIsTGLTAMYSI-RLFYYS 399
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQ-GALDNGAYILLALMLI-TSLITMYSLfRIFFLA 429
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
51-365 |
4.63e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.87 E-value: 4.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 51 FILDWMSLIFMGFVLMISFTVLFYSNDYMA-----GDLTKSRFVLLVMM---FVLSMLFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRhevehGELSPVTLRLYYGMyqlFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 123 YCLVIYYQNIKSFNA----------GMLTALtnrVGDVFILMSISWMLNFGS----WNYIYYYDYFYCSYDYSLICYLVM 188
Cdd:PRK06458 145 ALLVGIYRTRASLEAawkyiiicsvGVAFAL---FGTILVYANAATVMGDGEmailWTELLKHASLLDPTLMKLAFVFLL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 189 LAAMTKSAQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFSPLMILNC-----NYYMLFIGCLTMLMSGLVAN 262
Cdd:PRK06458 222 IGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIgsdfpGRLLLIFGLLSVLVAAFFLL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 263 YEFDLKKIIALSTLSQLGLMMGILSLGFPMLSF---FHLLIHALFKALLFlCAGCYIHGLLDHQDIRYMGSLVKLMPYSS 339
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
330 340
....*....|....*....|....*.
gi 1812385375 340 VCFNVANLSLCGFPFLSGFYSSDLIL 365
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-358 |
4.98e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 61.91 E-value: 4.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 185 YLVMLAAM-TKSAQIPFSAWLPAAM-SAPTPVSAlVHSSTLVTAGVYLLIRFSPLMILN--CNYYMLFIGCLTMLMSGLV 260
Cdd:PRK12665 212 FAVLLVAFgIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGggLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 261 ANYEFDLKKIIALSTLSQLGLMMGILSLGFPM-LS--FFHLLIHALFKALLFLCAgcyihGLLDHQD----IRYMGSLVK 333
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVV-----GLIERQAgsssLRRLGGLAK 365
|
170 180
....*....|....*....|....*
gi 1812385375 334 LMPYSSVCFNVANLSLCGFPFLSGF 358
Cdd:PRK12665 366 ASPLLAVLFFVPALNLGGIPPFSGF 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-359 |
1.16e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 60.60 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 50 AFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLtKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRG-RGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 129 YQNIKSFNAGMLTALTNRVGDVFILMSISWMLNF-GSWNYIYYYDYFYCSYDYSLICY--LVMLAA--MTKSAQIPFSAW 203
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLLLfgLVFLLVglAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 204 LPAAMS-APTPVSALVHSSTLVtAGVYLLIRFS----PLMILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQ 278
Cdd:PRK05777 227 TPDVYEgAPTPVTAFLATAPKI-AAFAVLLRLLvvafGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 279 LG-LMMGILSLGFPMLS--FFHLLIHALFKALLFLCAGCYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFL 355
Cdd:PRK05777 306 AGyLLVGLAAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPT 385
|
....
gi 1812385375 356 SGFY 359
Cdd:PRK05777 386 AGFW 389
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
29-396 |
2.55e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.57 E-value: 2.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 29 FDFSFMIEWeIYSLNssvILMAFILDWMSLIFMGFVLMISFTVLFYSNDymagDLTKSRFVLLVMMFVLSMLFLII--SP 106
Cdd:TIGR01972 55 FQFTEDIPW-IPALG---ISYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVflAL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 107 NLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWM--LNFGSWNYIYYYDYFYCSYDYSLIC 184
Cdd:TIGR01972 127 DLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLF 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 185 YLVMLAAMTKSAQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFS-PLMILNCNYYMLFIGCL---TMLMSGL 259
Cdd:TIGR01972 207 LAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFPDASLYFAPVLAALgviAIIYGAL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 260 VANYEFDLKKIIALSTLSQLGL-MMGILSLGFPMLS--FFHLLIHALFKALLFLCAGcYIHGLLDHQDIRYMGSLVKLMP 336
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFvLLGIFSFNELGISgaVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMP 364
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 337 YSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSldELNIIIYLMFYISTGLTAMYSIRLF 396
Cdd:TIGR01972 365 VLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF--KVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
198-365 |
4.34e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.98 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 198 IPFSAWLP-AAMSAPTPVSALvHSSTLVTAGVYLLIRFS-PLMILNCNYYMLFIGCLTMLM---SGLVANYEFDLKKIIA 272
Cdd:PRK05846 228 FPLHTWLPdAHVQAPTAGSVL-LAGILLKMGAYGLLRFSlPLFPDASHEFAPIIITLGVIAiiyGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 273 LSTLSQLG-LMMGILSLGFPMLS--FFHLLIHALFKALLFLCAGcYIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSL 349
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIQgaIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170
....*....|....*.
gi 1812385375 350 CGFPFLSGFYSSDLIL 365
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
186-365 |
9.10e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.76 E-value: 9.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 186 LVMLAAMTKSAQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFSPLMILN-----CNYYMLFIGCLTMLMSGL 259
Cdd:PRK08676 211 FIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaeqFSNVLIGLGIFSIAVAAF 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 260 VANYEFDLKKIIALSTLSQLGLMMGILSLGFPMLSF---FHLLIHALFKALLFLCAGCyIHGLLDHQDIRYMGSLVKLMP 336
Cdd:PRK08676 290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQP 368
|
170 180
....*....|....*....|....*....
gi 1812385375 337 YSSVCFNVANLSLCGFPFLSGFYSSDLIL 365
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
10-359 |
1.68e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.85 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 10 LLLFISgFVSFSMGLYMLLFdfsfmiEWEIYSLNSsvILMAFILDWMSLIFMGFVLMISFTVLFYSNDYM-AGDLTKSRF 88
Cdd:CHL00049 43 WLYFIS-STSLVMSITALLF------QWREEPMIS--FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 89 VLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYY-QNIKSFNAGMLTALTNRVGDVFILMSISWM-------- 159
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsggei 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 160 -LNFGSWNYIYYYDYFYCSYDYSLICYLVMLAamTKSAQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFSPL 237
Cdd:CHL00049 194 eLQEIVNGLINTQMYNSPGISIALIFITVGIG--FKLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIFDI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 238 M--ILNCNYYMLF--IGCLTMLMSGLVANYEFDLKKIIALSTLSQLG-LMMGILSlGFPMLSFFHLLIHALFKALLFLCA 312
Cdd:CHL00049 271 PfyFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGyVIIGIIV-GDSNDGYASMITYMLFYIFMNLGT 349
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1812385375 313 -GCYI-HGLLDHQD-IRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFY 359
Cdd:CHL00049 350 fACIVlFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-360 |
5.65e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.43 E-value: 5.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 52 ILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 132 IKSFNAGMLTALTNRVGDVFILMSISWM------LNFGswNYIYYYDYFYCSYDYSLICYLVMLAAMTKSAQIPFSAWLP 205
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLyaitgtLNMG--DMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 206 AAMSAPTPVSALVHSSTLVTAGVYLLIRFS--------PLMILNCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLS 277
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 278 QLG---LMMGILSLGFPMLSFFHLLIHALFKALLFLCAGCYIHGlLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPF 354
Cdd:PRK12662 314 HIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYH-FGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
....*.
gi 1812385375 355 LSGFYS 360
Cdd:PRK12662 393 TSGFVA 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
182-360 |
7.42e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 7.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 182 LICYLVMLAAM-TKSAQIPFSAWLPAAMS-APTPVSALVhSSTLVTAGVYLLIRFSPLMILNCNYYM----LFIGCLTML 255
Cdd:PRK12561 185 LLLYAGFLIAFgVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDAHVYFapalAILGVVNII 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 256 MSGLVANYEFDLKKIIALSTLSQLG-LMMGILSLGFPMLS--FFHLLIHALFKALLFLCAGCY---IHGLLdhqdIRYMG 329
Cdd:PRK12561 264 YGALNAFAQDNVKRRLAYSSVSHMGfVLLGIAAFTDLGISgaMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMG 339
|
170 180 190
....*....|....*....|....*....|.
gi 1812385375 330 SLVKLMPYSSVCFNVANLSLCGFPFLSGFYS 360
Cdd:PRK12561 340 GLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-397 |
7.17e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.41 E-value: 7.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 222 TLVTAGVYLLIRFSPLMIL-NCNYYMLFIGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPM---LSFFH 297
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFpSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFH 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 298 LLIHALFKALLFLCAGCyIHGLLDHQDIRYMGSLVKLMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEV---CSLDELN 374
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAamqANMPELA 402
|
170 180
....*....|....*....|...
gi 1812385375 375 IIiylMFYISTGlTAMYSIRLFY 397
Cdd:PRK06277 403 II---MIIVSIG-TFVSMMKAFY 421
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-401 |
1.52e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 44.72 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 89 VLLVMMFVLSMLFLIISPNLISILLGWDGLGLVSYCLVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWMLNFGSWNyi 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT-- 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 169 yyydyfycsydySLICYLVMLAAMTKSAQIPFSAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRFsplmiLNCNYYMLF 248
Cdd:PRK12664 144 ------------GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF-----FSGEEILLF 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 249 IGCLTMLMSGLVANYEFDLKKIIALSTLSQLGLMMGILSLGFPM-----LSFFHLLIHALFKALLFLCAGCYIHGLlDHQ 323
Cdd:PRK12664 207 LGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRT-RKF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 324 DIRYMGSLVKlMPYSSVCFNVANLSLCGFPFLSGFYSSDLILEVCSLDELNIIIY--LMFYISTGLTAMYSIRLFYYSLI 401
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFWYAFI 364
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
31-313 |
3.77e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.24 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 31 FSFMIEWEIYSLNSSVILMAFILDWMSliFMGFVLMISFTVLFYSNDYMAGDLTKSRFVLLVMMF-VLSMLFLIISPNLI 109
Cdd:PRK06459 18 FNKKASYILTMISSIILLITSIYEYNG--VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 110 SILLGWDGLGLVSYclVIYYQNIKSFNAGMLTALTNRVGDVFILMSISWmlnfgSWNYIYYYDYFYCSYDYSLIcyLVML 189
Cdd:PRK06459 96 LFLAGWEIMTIPSY--VAIALTKKNKRPAFVFMAFGELSTVLILAGFAW-----AFIISGTTNFSYLPSPVPLI--LASF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385375 190 AAMTKSAQIPF--SAWLPAAMSAPTPVSALVHSSTLVTAGVYLLIRF----SPLMILNCNYYMLFIGCLTMLMSGLVANY 263
Cdd:PRK06459 167 GFIIKMGMMPFlvSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMtiltQTIPIGYFGLTILAIGAFSILFGALYAYV 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385375 264 EFDLKKIIALSTLSQLGLMMGILSL------------GFPMLS-FFHLLIHALFKALLFLCAG 313
Cdd:PRK06459 247 SENVKGLLAFSTIENNGAILVALGLymvtkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
1.12e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 37.02 E-value: 1.12e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1812385375 41 SLNSSVILMAFILDWMSLIFMGFVLMISFTVLFYSNDYMAGDLTKSRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| |
