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Conserved domains on  [gi|1812385392|gb|QID48517|]
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NADH dehydrogenase subunit 1 [Bolivaritettix sikkinensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-310 3.90e-121

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 350.22  E-value: 3.90e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392   6 LYMFILNFFFILFMVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  86 LFLSLFIWMVFPYLTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 166 CYDLHYYSYYQS-VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385392 245 SLFFLGGDYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMV 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-310 3.90e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 350.22  E-value: 3.90e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392   6 LYMFILNFFFILFMVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  86 LFLSLFIWMVFPYLTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 166 CYDLHYYSYYQS-VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385392 245 SLFFLGGDYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMV 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
20-302 6.07e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.20  E-value: 6.07e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 -LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS 177
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 -VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGG----- 251
Cdd:pfam00146 169 gGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1812385392 252 -DYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-297 2.61e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.08  E-value: 2.61e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPL--GLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ 176
Cdd:COG1005   101 GPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQ 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 177 S--VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYS 254
Cdd:COG1005   181 AggLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1812385392 255 ------------SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:COG1005   261 pfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-310 3.90e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 350.22  E-value: 3.90e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392   6 LYMFILNFFFILFMVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  86 LFLSLFIWMVFPYLTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 166 CYDLHYYSYYQS-VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385392 245 SLFFLGGDYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMV 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
8-308 1.20e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 323.53  E-value: 1.20e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392   8 MFILNFFFILFMVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLF 87
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  88 LSLFIWMVFPYLTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCY 167
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 168 DLHYYSYYQSV-WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISL 246
Cdd:MTH00225  162 NLFDFSYNQKYfWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1812385392 247 FFLGGDY--SSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSF 308
Cdd:MTH00225  242 LFFGGFFvtIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
19-307 1.98e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 320.28  E-value: 1.98e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:MTH00143   13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDL-HYYSYYQS 177
Cdd:MTH00143   93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFiEISESQFS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGD----- 252
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSsvlfl 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1812385392 253 YSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFS 307
Cdd:MTH00143  253 LGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
20-309 3.33e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 300.00  E-value: 3.33e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS-V 178
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEfM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDY----- 253
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYnhlqp 257
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1812385392 254 --SSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFM 309
Cdd:MTH00071  258 elSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPIS 315
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
19-313 2.42e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 297.59  E-value: 2.42e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ-S 177
Cdd:MTH00218   94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQeT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYSSLY 257
Cdd:MTH00218  174 IWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTIN 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385392 258 FFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMVYVL 313
Cdd:MTH00218  254 LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
20-297 5.79e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 294.59  E-value: 5.79e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ-SV 178
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQeSI 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDY----- 253
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHiptlp 258
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1812385392 254 --SSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:MTH00134  259 elTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
20-297 1.99e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 290.64  E-value: 1.99e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ-SV 178
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQePL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYSSLY- 257
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPp 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1812385392 258 ------FFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:MTH00111  258 elftinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
20-297 2.35e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 282.67  E-value: 2.35e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ-SV 178
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQeHL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYS---- 254
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNpymp 252
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1812385392 255 ---SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:MTH00104  253 elyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
20-304 1.46e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 280.09  E-value: 1.46e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQSV- 178
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFs 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYSSLyF 258
Cdd:MTH00195  175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTII-V 253
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1812385392 259 FFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFI 304
Cdd:MTH00195  254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLA 299
NADHdh pfam00146
NADH dehydrogenase;
20-302 6.07e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.20  E-value: 6.07e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 -LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS 177
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 -VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGG----- 251
Cdd:pfam00146 169 gGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1812385392 252 -DYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
20-310 1.08e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 276.09  E-value: 1.08e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS-V 178
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNgS 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYSSLYF 258
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPFNEI 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 259 F--------FKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMV 310
Cdd:MTH00040  257 FpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-297 2.61e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.08  E-value: 2.61e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPL--GLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ 176
Cdd:COG1005   101 GPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQ 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 177 S--VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYS 254
Cdd:COG1005   181 AggLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1812385392 255 ------------SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:COG1005   261 pfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
19-310 5.46e-87

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 263.56  E-value: 5.46e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:MTH00010   15 MALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPH 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQSV 178
Cdd:MTH00010   95 KHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLG----GDYS 254
Cdd:MTH00010  175 WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFIS 254
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385392 255 SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSFMV 310
Cdd:MTH00010  255 DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
20-297 2.33e-84

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 257.04  E-value: 2.33e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 TFF--SAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS 177
Cdd:PRK06076  103 PELviADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQF 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 -VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYS-- 254
Cdd:PRK06076  183 lSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPpf 262
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1812385392 255 --------SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:PRK06076  263 plgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
20-308 5.26e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 253.89  E-value: 5.26e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00216   19 LLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYE 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 --TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLH--YYSYY 175
Cdd:MTH00216   99 rgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITeiVLAQN 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 176 QSVWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYS- 254
Cdd:MTH00216  179 NGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSp 258
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1812385392 255 -------SLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSF 308
Cdd:MTH00216  259 ikyfkggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
20-305 2.31e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 249.64  E-value: 2.31e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00054   15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 T--FFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQS 177
Cdd:MTH00054   95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQK 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 178 -VWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGG----- 251
Cdd:MTH00054  175 nIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGwlvis 254
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385392 252 -----DYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIG 305
Cdd:MTH00054  255 gptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSG 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
20-305 1.39e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 209.87  E-value: 1.39e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00029   20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMD 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 100 --TFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ- 176
Cdd:MTH00029  100 qgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQr 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 177 SVWFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGG----- 251
Cdd:MTH00029  180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1812385392 252 ------------------DYSSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIG 305
Cdd:MTH00029  260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAG 331
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
19-308 7.82e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 190.50  E-value: 7.82e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:MTH00090    8 FILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFfligcydLHYYSYYQSV 178
Cdd:MTH00090   88 FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIM-------LHNNSFSFVS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLggDYSSLYF 258
Cdd:MTH00090  161 SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFSFLML 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1812385392 259 FFKLVFVAFsflwLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFIGFSF 308
Cdd:MTH00090  239 FLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
19-304 3.92e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 150.07  E-value: 3.92e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  19 MVLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSPMLSLFLSLFIWMVFPY 98
Cdd:MTH00058   13 IILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  99 LTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLhyYSYYQSV 178
Cdd:MTH00058   93 YYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL--VDFYYSG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 179 WFVFLSLPL-FLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLGGDYSSLY 257
Cdd:MTH00058  171 WLSVLLFPLiYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM 250
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1812385392 258 FFFKLVFvafsFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFI 304
Cdd:MTH00058  251 LLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
20-297 4.83e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 119.67  E-value: 4.83e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  20 VLLSVAFLTLLERSVLGYIQLRKGPNSVGMSGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMSP---MLSLFLSLFIwMVF 96
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV-IPF 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  97 PYLTFFSAFPLGLLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQ 176
Cdd:CHL00032  119 GYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQ 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 177 SVWFvFLSLPL------FLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMSFLISLFFLG 250
Cdd:CHL00032  199 SKYG-FWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1812385392 251 GDYSSLYFFFKLVFV---------------------AFSFLWL----RGTLPRYRYDKLMYLCWSGFLPVAL 297
Cdd:CHL00032  278 GWNLSIPYIFIPELFeinktggvfgttigifitlakTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-304 9.94e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 109.50  E-value: 9.94e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392  26 FLTLLERSVLGYIQLRKGPnsvgmsGVFQPFGDAIKLFTKQCVTPYFSNYIFYIMsPMLSLFLSLFIWMVFPYLTFFSAF 105
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRAA-PYVALAAMLLAALLVPVLTTGPPL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 106 PLG--LLFIMCIMSLGVFGLMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYSYYQSVWFVFL 183
Cdd:COG0650    93 SFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385392 184 SLP----LFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEY-SMIIFMSFLISLFFLGG-----DY 253
Cdd:COG0650   173 LSPslllAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSLFVNLFLPWGialtlLL 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1812385392 254 SSLYFFFKLVFVAFSFLWLRGTLPRYRYDKLMYLCWSGFLPVALNYMFFFI 304
Cdd:COG0650   253 ALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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