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Conserved domains on  [gi|1836287295|gb|QJI05919|]
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10.4 kDa protein [Human adenovirus E4]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Adeno_E3B super family cl04031
Adenovirus E3B protein;
30-90 6.32e-06

Adenovirus E3B protein;


The actual alignment was detected with superfamily member pfam03376:

Pssm-ID: 460904  Cd Length: 67  Bit Score: 40.27  E-value: 6.32e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1836287295 30 DCIGPFASYVLFAFITCICCCSIVCLLITFFQFVDWVFVRIAYLRHHPQYRDQRVAQLLRL 90
Cdd:pfam03376  7 DCIPLFALFCACGFLAAIAHCELDCIPIAFIQFIDGFCTLIAICRHHPQVIAFIIADDLRC 67
 
Name Accession Description Interval E-value
Adeno_E3B pfam03376
Adenovirus E3B protein;
30-90 6.32e-06

Adenovirus E3B protein;


Pssm-ID: 460904  Cd Length: 67  Bit Score: 40.27  E-value: 6.32e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1836287295 30 DCIGPFASYVLFAFITCICCCSIVCLLITFFQFVDWVFVRIAYLRHHPQYRDQRVAQLLRL 90
Cdd:pfam03376  7 DCIPLFALFCACGFLAAIAHCELDCIPIAFIQFIDGFCTLIAICRHHPQVIAFIIADDLRC 67
 
Name Accession Description Interval E-value
Adeno_E3B pfam03376
Adenovirus E3B protein;
30-90 6.32e-06

Adenovirus E3B protein;


Pssm-ID: 460904  Cd Length: 67  Bit Score: 40.27  E-value: 6.32e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1836287295 30 DCIGPFASYVLFAFITCICCCSIVCLLITFFQFVDWVFVRIAYLRHHPQYRDQRVAQLLRL 90
Cdd:pfam03376  7 DCIPLFALFCACGFLAAIAHCELDCIPIAFIQFIDGFCTLIAICRHHPQVIAFIIADDLRC 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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