|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-573 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 571.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 2 LNNYYLFSLFFFILGIFFFFFSLLFMFNDFILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGL 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 82 DFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 162 FGSWNYVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 242 GTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVF 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 322 DCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 402 IKPFSFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFI 481
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 482 MKS-RSSFMKTFLALMWFMPMISTNIVSYSFLFYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIML 560
Cdd:MTH00165 481 LKSlKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1893869112 561 FSLMFMFLFMFIY 573
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-572 |
1.59e-162 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 475.10 E-value: 1.59e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 7 LFSLFFFILGIFFFFFSLLFMFNDFILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSD 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 87 RFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 167 YVFYYDFFFnsydYSLVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-YFSGTSY 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 246 YLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 326 IRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPF 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 406 SFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSfimKSR 485
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFS---SSK 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 486 SSFMKTFLALMWFMPMISTNIVSYSFLFYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIMLFSLMF 565
Cdd:MTH00151 479 MVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLV 558
|
....*..
gi 1893869112 566 MFLFMFI 572
Cdd:MTH00151 559 LFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
29-571 |
1.83e-153 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 451.79 E-value: 1.83e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 29 NDFILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNL 108
Cdd:MTH00209 26 FQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 109 ISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWNyvfyydFFFNSYDYSL---VCF 185
Cdd:MTH00209 106 ITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN------IFYLNFNSNLgsvISV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 186 MVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLY-FSGTSYYLLLFGCLTMFMSGLSANC 264
Cdd:MTH00209 180 LIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFsSPFFSMSLLLLGSLTTLMASMSANV 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 265 EFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLN 344
Cdd:MTH00209 260 ESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLN 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 345 VSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISM 424
Cdd:MTH00209 340 IANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPM 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 425 FILLLSVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRssfMKTFLALMWFMPMIST 504
Cdd:MTH00209 420 LVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYK---VNYFLSQMWFLPDLSS 496
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869112 505 NIVSYSFLFYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIMLFSLMFMFLFMF 571
Cdd:MTH00209 497 QPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILF 563
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
1.11e-146 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 434.96 E-value: 1.11e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 1 MLNNYYLFSLFFFILGIFFFFFSLLFMFNDFILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMG 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 81 LDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 161 NFGSWNYVFYYDFFFNSYdyslVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLY- 239
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 240 FSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHS 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 320 VFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 400 SLIKPFSFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFS 479
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNIT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 480 FIMKSRSSFMKTF-LALMWFMPMISTNIVSYSFLFYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYI 558
Cdd:MTH00207 479 KTPLLINNPLSHFaSCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL 558
|
570
....*....|...
gi 1893869112 559 MLFSLMFMFLFMF 571
Cdd:MTH00207 559 MMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
32-572 |
8.99e-108 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 335.38 E-value: 8.99e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 32 ILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISI 111
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 112 LLGWDGLGLVSYCLVIYYQNVKSANAGMLTAL-SNRVGDVFILLSISWML-NFGSWNYVFYYDFFFNSYdysLVCFMVVL 189
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFILNLDLT---LFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 190 AGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTS-YYLLLFGCLTMFMSGLSANCEFDL 268
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLIlGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 269 KKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSIL 348
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 349 SLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILL 428
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 429 LSVILCGSMLSWLIFPV-PICIYLPMYLKLMTVFIVLAGVYLGYLFFFLdfsfIMKSRSSFMKTFLALMWFMPMISTNIV 507
Cdd:MTH00211 453 LGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNL----THKQLKTSTLSFSNMLGYYPPIIHRLL 528
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869112 508 SYSFLFYGGS-SLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIMLFSLMFMFLFMFI 572
Cdd:MTH00211 529 PKLSLKWGQTlSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
40-574 |
3.20e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 290.72 E-value: 3.20e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 40 FSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLG 119
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 120 LVSYCLVIYYQNVKSANAGMLTA-LSNRVGDVFILLSISW-MLNFGSWNYVFYydFFFNSYDYSLVCFM---VVLAGMTS 194
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEI--LSLNNSNSFLINILlfgILLAAAGK 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 195 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLF-GCLTMFMSGLSANCEFDLKKIIA 273
Cdd:MTH00208 250 SAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIlGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGF 353
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 354 PFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILLLSVIL 433
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 434 CGSMLSWLIFPVPICIyLPMYLKLMTVFIVLAGVYLGYLFFfldFSFIMKSRSSFMKTFLALMWFMPMIS-TNIVSYSFL 512
Cdd:MTH00208 490 SGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFL---LSLSSNPINSNFFSFLSNQWFFVNIShSIIISFSFF 565
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1893869112 513 FYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIMLFSLMFMFLFMFIYI 574
Cdd:MTH00208 566 TSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-543 |
6.24e-88 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 283.97 E-value: 6.24e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTA-LSNRVGDVFILLSISWMLN-FGSWNY--VF-YYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAW 203
Cdd:COG1009 154 WYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFseLLaAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLF-GCLTMFMSGLSANCEFDLKKIIALSTLSQLGL 282
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIiGAITALFAALIALAQTDIKRVLAYSTVSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 283 MMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSS 362
Cdd:COG1009 314 MFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 363 DLILE-FCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWL 441
Cdd:COG1009 393 EAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGL 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 442 ---------IFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRSSFMKTFLALMWFMPMIstnivsYSFL 512
Cdd:COG1009 473 legllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLLYLKRPLPALAERLKPLYRLLANKWYFDEL------YDAL 546
|
490 500 510
....*....|....*....|....*....|.
gi 1893869112 513 FYGGsSLSLLDYGWFEYYGAQGVYNFFMYFI 543
Cdd:COG1009 547 FVKP-VRALARFLWFDRYVIDGIVNGLARLT 576
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
49-537 |
2.86e-86 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 279.36 E-value: 2.86e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:MTH00004 78 ISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTA-LSNRVGDVFILLSISWM-LNFGSWNYvfyyDFFFNSYDYSLVCFM-VVLAGMTSSAQIPFSAWLP 205
Cdd:MTH00004 158 WSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI----QQLFSPTQTPTLPLLgLILAATGKSAQFGLHPWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYL-LLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMM 284
Cdd:MTH00004 234 AAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 285 GILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDL 364
Cdd:MTH00004 314 VTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDT 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 365 ILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPfsfnvLRNFYYMNIDMNISMFI-----LLLSVILCGSMLS 439
Cdd:MTH00004 394 IIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGF-----PRTPPTTPINENTPTIInpitrLALGSILAGLLIS 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 440 WLIFPV-PICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRSSFMKTFLALMWFMPM----ISTNIVSYSFLFy 514
Cdd:MTH00004 469 STILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLthrlLPMTLLKSSQKI- 547
|
490 500
....*....|....*....|...
gi 1893869112 515 ggsSLSLLDYGWFEYYGAQGVYN 537
Cdd:MTH00004 548 ---ATHLIDLSWLEKMGPKGLAN 567
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
37-570 |
2.36e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 269.08 E-value: 2.36e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 37 WDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWD 116
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 117 GLGLVSYCLVIYYQNVKSANAGMLTA-LSNRVGDVFILLSISW-MLNFGSWNYvfyyDFFFNSYDYSLVCFM-VVLAGMT 193
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWEL----QQIFLLNDNSTLPLLgLILAAAG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 194 SSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYL-LLFGCLTMFMSGLSANCEFDLKKII 272
Cdd:MTH00066 220 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDIKKIV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 273 ALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCG 352
Cdd:MTH00066 300 AFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTG 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 353 FPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLrnfyyMNIDMNISMFI-----L 427
Cdd:MTH00066 380 TPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPL-----SPINENNPLIInpikrL 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 428 LLSVILCGSMLSWLIFPV-PICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRssfMKTFLALMWFMPMISTNI 506
Cdd:MTH00066 455 AWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTK---MHSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869112 507 VSYSFLFYGGS-SLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFDYNFSTYIMLF--SLMFMFLFM 570
Cdd:MTH00066 532 SPKTNLNSGQNiATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFliTLLLMLILL 598
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-515 |
1.60e-77 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 256.83 E-value: 1.60e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 37 WDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 117 GLGLVSYCLV-IYYQNVKSANAGMLTALSNRVGDVFILLSISWMLN-FGSWNY--VFYYDFFFNSYDYSLVCFMVVLAGM 192
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 193 TSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LYFSGTSYYLLLFGCLTMFMSGLSANCEFDLKKI 271
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 272 IALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLC 351
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 352 GFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILLLSV 431
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 432 ILCGSMLSWLIFPVPICIY-----------LPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKS--RSSFMKTFLALMWF 498
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLLYLGNPTLPAKIaqRHSGLYRLLLNKWY 544
|
490
....*....|....*..
gi 1893869112 499 MPMISTNIVSYSFLFYG 515
Cdd:TIGR01974 545 FDELYDKVFVKPYLFLG 561
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
49-474 |
1.45e-76 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 254.31 E-value: 1.45e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTA-LSNRVGDVFILLSISWML-NFGSWNY--VFYYDFFFNSYDYS---LVCFMVVLAGMTSSAQIPFS 201
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdeVFAAAPQFFGLGWSaltLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 202 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGT-SYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQL 280
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEaLLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 281 GLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFY 360
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 361 SSDLILEFcSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSlikpFSFNVLRNFYYMN---IDMNISMFIL-LLSV----I 432
Cdd:PRK06590 398 SKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLIFLV----FHGKEKEKIHHPHespAVMTLPLIVLaVLSVfagaL 472
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1893869112 433 LCGSMLSWLIFP-----VPICIYLPMYLKLMTVFIVLAGVYLGYLFF 474
Cdd:PRK06590 473 IVPPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLLY 519
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-540 |
1.48e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 254.01 E-value: 1.48e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 37 WDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWD 116
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 117 GLGLVSYCLVIYYQNVKSANAGMLTA-LSNRVGDVFILLSISW-MLNFGSWNyvFYYDFFFNSYDYSLVCFMVVLAGMTS 194
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWD--LQQIFMLNPNNSNLPLMGLLLAATGK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 195 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLL-FGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:MTH00108 224 SAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGF 353
Cdd:MTH00108 304 FSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 354 PFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILLLSVIL 433
Cdd:MTH00108 384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIF 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 434 CGSMLSWLIFPVPIC-IYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRSSFMKtFLALMWFMPMISTNIVSYSFL 512
Cdd:MTH00108 464 AGFLISNNIPPTTIPqMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFK-FSNMLGYFPTIMHRLPPYMNL 542
|
490 500
....*....|....*....|....*....
gi 1893869112 513 FYG-GSSLSLLDYGWFEYYGAQGVYNFFM 540
Cdd:MTH00108 543 TMSqKLASMLLDLIWLEKILPKTISLIQM 571
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
29-514 |
1.36e-71 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 240.75 E-value: 1.36e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 29 NDFILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNL 108
Cdd:MTH00020 54 SSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 109 ISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTA-LSNRVGDVFILLSISWMLN-FGSWNY--VFYYDFFFNSYDYSLVC 184
Cdd:MTH00020 134 LQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAmLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLIC 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 185 FMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLL-LFGCLTMFMSGLSAN 263
Cdd:MTH00020 214 LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 264 CEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCL 343
Cdd:MTH00020 294 VQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFF 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIK--PFSFNVLRNFYYMNIDMN 421
Cdd:MTH00020 374 LIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSntNLKKAVFFHLHEGDWNLL 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 422 ISMFILLLSVILCGSMLSWLIFPVPICIY--LPMYLKLMTVFIVLAGVYLGYLFFFldfsfimksrssfmktFLALMWFM 499
Cdd:MTH00020 454 LPLGILALGSIFVGYLAKEMIWSFQITLPpiVPLSIKLLPVFLSLGGIGLVIILYF----------------YSSKTFRV 517
|
490
....*....|....*
gi 1893869112 500 PMISTNIVSYSFLFY 514
Cdd:MTH00020 518 PFSFIGRNSYTFLGS 532
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
49-399 |
6.51e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 236.27 E-value: 6.51e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGW 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTA-LSNRVGDVFILLSISWML-NFGSWNY--VFyydFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWL 204
Cdd:MTH00137 162 WYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIqqIF---ALSKDFDLTLPLLGLILAATGKSAQFGLHPWL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLL-FGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLM 283
Cdd:MTH00137 239 PSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLcLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLM 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 284 MGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSD 363
Cdd:MTH00137 319 MVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKD 398
|
330 340 350
....*....|....*....|....*....|....*.
gi 1893869112 364 LILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYY 399
Cdd:MTH00137 399 AIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFF 434
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
54-539 |
8.72e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 231.05 E-value: 8.72e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 54 DWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:MTH00210 79 DSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRI 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 134 SAN-AGMLTALSNRVGDVFILLSISWMLN-FGSWNYVFYYDF---FFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAM 208
Cdd:MTH00210 159 KANkAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLlvtNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 209 AAPTPVSALVHSSTLVTAGVYLLIRFSPMlyFSGTSYYLLL---FGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMG 285
Cdd:MTH00210 239 EGPTPVSALIHAATMVTAGVFLIIRSGPL--FEGSPLALTIvtiLGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 286 ILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLI 365
Cdd:MTH00210 317 VCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLI 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 366 LEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLI--KPFSFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWLIF 443
Cdd:MTH00210 397 LELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFItnTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVL 476
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 444 PVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDFSFIMKSRSSFMK-------TFLALMW-FMPMISTNIVSYSFLFYG 515
Cdd:MTH00210 477 SNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIrlyhviyTFLNSAWqFNYVINHFIVKNIWKFGH 556
|
490 500
....*....|....*....|....
gi 1893869112 516 GSSLSLLDYGWFEYYGAQGVYNFF 539
Cdd:MTH00210 557 LITYRIIDRGLLEIIGPRGISKVL 580
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
31-518 |
1.66e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 206.31 E-value: 1.66e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 31 FILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLIS 110
Cdd:MTH00095 21 FLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFT 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 111 ILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLNFGswnyvfyYDFFFNSYDYSLVCFMVVLA 190
Cdd:MTH00095 101 MLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSFSFFSSSMILMLLLT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 191 GMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLFGCLTMFMSGLSANCEFDLKK 270
Cdd:MTH00095 174 SFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 271 IIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCL 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 351 CGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIkpfSFNVLRNFYYMNIDMN-ISMFILLL 429
Cdd:MTH00095 334 CGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL---SFSKVVNVYSSSVLMNfLSLMLVFF 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 430 SVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDF--SFIMKSRSSFMKTFLALMWFMPMISTNIV 507
Cdd:MTH00095 411 SVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELkyKFFVDYFAKNVIYKLKNLKFFDLFLNKFG 490
|
490
....*....|.
gi 1893869112 508 SYSFLFYGGSS 518
Cdd:MTH00095 491 YKGFNFFSSFS 501
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-398 |
4.06e-58 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 206.03 E-value: 4.06e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 34 LIEWDifSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILL 113
Cdd:PRK07376 72 LFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 114 GWDGLGLVSYCLV-IYYQNVKSANAGMLTALSNRVGDVFILLSI---SWMLnfGSWNYVFYYDFFFNSYDYSLV------ 183
Cdd:PRK07376 150 FWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWAT--GSFDFDGIADRLSELVSSGAVsgwlal 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 184 --CFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-YFSGTSYYLLLFGCLTMFMSGL 260
Cdd:PRK07376 228 llCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeQFPAVMTVIAWTGAITAFLGAS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 261 SANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFD--------CQDIRYMGSL 332
Cdd:PRK07376 308 IALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGL 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1893869112 333 TFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLIL--EFCSynymNCMVYFLFFFSTGLTVMYSFRLFY 398
Cdd:PRK07376 388 RKYMPITAITFLIGCLAISGIPPFAGFWSKDEILgaAFEA----NPALWFVGFLTAGMTAFYMFRMYF 451
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
49-368 |
5.86e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 180.54 E-value: 5.86e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:MTH00032 74 IGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTAL-SNRVGDVFILLSISWM------LNFGSWNYVFYYDFFFNSYDY------------SLVCFMVVL 189
Cdd:MTH00032 154 WTTRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRGYYgggayesplapfAIIGILLLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 190 AGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLL-LFGCLTMFMSGLSANCEFDL 268
Cdd:MTH00032 234 GCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 269 KKIIALSTLSQLGLMMGILGL-GYPLLSFFHLLIHALFKSLLFLCAGFYIHSV-FDCQDIRYMGSLTFSMPYVSSCLNVS 346
Cdd:MTH00032 314 KKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMMLIG 393
|
330 340
....*....|....*....|..
gi 1893869112 347 ILSLCGFPFLSGFYSSDLILEF 368
Cdd:MTH00032 394 SFSIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-367 |
8.74e-46 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 173.31 E-value: 8.74e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 43 NSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 123 YCLVIyyQNVKSANAG-MLTALSNRVGDVFILL------------SISWMLNFGSWNYvfyydfffNSYDYSLVCFMVVL 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 190 AGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlyFSGT---SYYLLLFGCLTMFMSGLSANCEF 266
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPV--FHDVavwNWLLIIVGMITALMGAVFAVQKT 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 267 DLKKIIALSTLSQLGLMMGILGLGYPL---LSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCL 343
Cdd:PRK12650 295 DLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSV 373
|
330 340
....*....|....*....|....
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLT 397
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-389 |
1.32e-43 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 157.09 E-value: 1.32e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 105 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWNYVF----YYDFFFNSYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 180 YSLVCFMVVLAGMTSSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGT--SYYLLLFGCLTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPfiQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 257 MSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPL---LSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869112 334 FSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILefcsYNYMNCMVYFLFFFSTGLT 389
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLIL----AAAVAASWIFLVLAGVVGS 291
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-367 |
6.99e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 160.85 E-value: 6.99e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 50 SIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12647 59 SFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 130 QNVKSANAGMLTALSNRVGDVFILL-------------SISWMLNFGswnyvfyyDFFFNSYDYSLVCFMVVLAGMTSSA 196
Cdd:PRK12647 139 HEREAARRAALQALLVTGGGGLALLaglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLyfSGTSYY---LLLFGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVL--GGTPLWqtiLPLFGGLTMLTGALLAVRQTDLKLILA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSM 367
|
330
....*....|....*..
gi 1893869112 351 CGFPFLSGFYSSDLILE 367
Cdd:PRK12647 368 AGLPPLFGFLAKELIYE 384
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
31-513 |
4.63e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 147.33 E-value: 4.63e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 31 FILLIEWDIFSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLIS 110
Cdd:MTH00063 21 VSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 111 ILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWmlnfgswnyvfyydFFFNSYDYSLVCFMVVLA 190
Cdd:MTH00063 101 TLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL--------------SCWGGSGSFLCCLFFFLI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 191 GMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLFGCLTMFMSGLSANCEFDLKK 270
Cdd:MTH00063 167 VFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKK 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 271 IIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:MTH00063 247 IVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGL 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 351 CGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSL-IKPFSFNVLRNFYYMNIDMnismfilll 429
Cdd:MTH00063 327 SGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFgVKSSLSSGVRFLFFNSGLM--------- 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 430 svILCGSMLSWLIFP-VPICIYLPMYLKLMTVFIVLAGVYLGYLFFFLDfSFIMKSRSSFMKTFLALMWFMPMISTNIVS 508
Cdd:MTH00063 398 --VFLWLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSN-LFSNWSSSLFGCDNLVELFYELFYSILDLV 474
|
....*
gi 1893869112 509 YSFLF 513
Cdd:MTH00063 475 SLFFF 479
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
53-367 |
8.42e-38 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 149.13 E-value: 8.42e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDF-NSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 130
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 131 NVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWN----YVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPA 206
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNniteILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLF-GCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFvGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 286 ILGLG--------------YPLLSF---FHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSIL 348
Cdd:PRK12646 316 MVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 1893869112 349 SLCGFPFLSGFYSSDLILE 367
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-399 |
1.12e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.52 E-value: 1.12e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 50 SIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 130 QNVKSANAGMLTALSNRVGDVFILLSISWM-LNFGSWNyvfYYDFFFNSYDYS-----LVCFMVVLAGMTSSAQIPFSAW 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLN---MADLAARLAELDpglllAAFALLLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 204 LPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLY----FSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLS 278
Cdd:COG0651 228 LPDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 279 QLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGfYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPF 355
Cdd:COG0651 307 QIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAG-AIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1893869112 356 LSGFYSSDLILE--FCSYNYmncMVYFLFFFSTGLTVMYSFRLFYY 399
Cdd:COG0651 386 LSGFVSKWLLLQaaLEAGAW---LLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
53-367 |
1.97e-37 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 148.07 E-value: 1.97e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:TIGR00940 73 MDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 133 KSANAGMLTALSNRVGDVFILLSISWMLNFGSWNYVFYY-----DFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAA 207
Cdd:TIGR00940 153 AHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAviasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLL-LFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGI 286
Cdd:TIGR00940 233 MEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 287 LGLGYPLLSF----------------FHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:TIGR00940 313 LGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMIASAAM 391
|
330
....*....|....*..
gi 1893869112 351 CGFPFLSGFYSSDLILE 367
Cdd:TIGR00940 392 AGVPPFNGFLSKEMFFA 408
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
1.26e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 145.84 E-value: 1.26e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYmgldFNSD-----RFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVI 127
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARY----FDDDeprlgRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 128 YYQNVKSA-----NAGMLTA---LSNRVGdvFILL-------SISWML-NFGSWNYVfyydfffnsyDYSLVCfmvVLAG 191
Cdd:PRK12644 148 HYAERAASrraalQALLVTTaggLAMLVG--IIILgqaagtyRLSELLaDPPTGPAV----------SVAVVL---ILVG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 192 -MTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLL-FGCLTMFMSGLSANCEFDLK 269
Cdd:PRK12644 213 aLSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLvLGLATMLLGGWRALRQHDLK 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 270 KIIALSTLSQLGLMMGILGLGYP---LLSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVS 346
Cdd:PRK12644 293 LILAYGTVSQLGFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFLVVGIIDHST-GTRDIRKLSGLGRRQPVLAVVAALA 371
|
330 340
....*....|....*....|.
gi 1893869112 347 ILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK12644 372 AASMAGLPPLLGFVAKEAALE 392
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-397 |
4.98e-36 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 143.49 E-value: 4.98e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 70 MVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSANAGMLTALSNRVG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 149 DVFILLSIS---WMLNFGSWNYVF------YYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVH 219
Cdd:CHL00025 186 DFGLLLGILgfyWITGSFEFRDLFeifnnlIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 220 SSTLVTAGVYLLIRFSPMLYFSGTSYYLL-LFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFH 298
Cdd:CHL00025 266 AATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFH 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 299 LLIHALFKSLLFLCAGFYIHSV--------FDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILEfcs 370
Cdd:CHL00025 346 LITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN--- 422
|
330 340 350
....*....|....*....|....*....|..
gi 1893869112 371 ynymNCMVYFLFF-----FSTGLTVMYSFRLF 397
Cdd:CHL00025 423 ----DSWLYSPIFaiiawSTAGLTAFYMFRIY 450
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-361 |
1.40e-33 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 136.47 E-value: 1.40e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 133 KSANAGMLTALSNRVGDVFILLSisWMLNFGswNYVfyydfffNSYD----------------YSLVCFMVVLAGMTSSA 196
Cdd:PRK12648 154 ADARRGARMALTVTGAGGLALLA--GVLLLG--HIV-------GSYDldvvlaagdlirahplYPPALVLILLGAFTKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLyfSGTSYYLLLF---GCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK12648 223 QFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVL--AGTEEWFWIVggaGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPL---LSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET-GTRDMRRLSGLRRLMPITATLAMVAAAAM 379
|
330
....*....|.
gi 1893869112 351 CGFPFLSGFYS 361
Cdd:PRK12648 380 AGVPLLNGFLS 390
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
2.20e-32 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 132.74 E-value: 2.20e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNS-DRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 132 VKSANAG-----MLT---ALSNRVGdvFILLSISwmlnFGSWN---YVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPF 200
Cdd:PRK12645 156 REASRYGaqksmLITvfgGLSMLGG--FILLYIM----TGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLL-LFGCLTMFMSGLSANCEFDLKKIIALSTLSQ 279
Cdd:PRK12645 230 YIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 280 LGLMMGILGLGYPLLSF----------------FHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCL 343
Cdd:PRK12645 310 LGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIA 388
|
330 340
....*....|....*....|....
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-367 |
2.04e-30 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 126.48 E-value: 2.04e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 44 SSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSY 123
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 124 CLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWNYVF--------YYDFFFNSYDYSLVCFMVVLAGMTSS 195
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdseLIENIKGHPLFLITLILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 196 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlyFSGTSYYLLLF---GCLTMFMSGLSANCEFDLKKII 272
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPI--FSGTEAWFILVsgtGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 273 ALSTLSQLGLMMGILGLG---YPLLSF----FHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNV 345
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTtyhEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASI 385
|
330 340
....*....|....*....|..
gi 1893869112 346 SILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
1.71e-28 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 118.92 E-value: 1.71e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 45 SVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMG-------LDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDG 117
Cdd:PRK06525 65 DVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 118 LGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWM-LNFGSWNYVFYYDFffNSYDYSLVCFMVVLAGMTSSA 196
Cdd:PRK06525 145 TGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSGL--HGSLKYLVFLGILFAAWGKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmLYFSGT-----SYYLLLFGCLTMFMSGLSANCEFDLKKI 271
Cdd:PRK06525 223 QLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA---IQSMGPiphviGYVGAVMAIVTLLYGFLMYLPQQDMKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 272 IALSTLSQLGLMmgILGLGYPLL--------SFFHLLIHALFKSLLFLCAGFYIHSvFDCQDIRYMGSLTFSMPYVSSCL 343
Cdd:PRK06525 300 LAYSTITQLGYM--FFGLSLAILgsrlalegSIAYIFNHAFAKSLFFLVAGALSYS-CGTRLLPRLRGVLKKLPLVGVGF 376
|
330 340
....*....|....*....|...
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLIL 366
Cdd:PRK06525 377 CVAALAITGVPPFNGFFSKFPIF 399
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-572 |
5.27e-28 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 110.33 E-value: 5.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 392 YSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISMFILLLSVILCGSMLSWLIFPVPICIYLPMYLKLMTVFIVLAGVYLGY 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 472 LFFFLDFSFIMKSRSSFMKTFLALMWFMPMISTNIVSYSFLFYGGSSLSLLDYGWFEYYGAQGVYNFFMYFISQYLCFFD 551
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|.
gi 1893869112 552 YNFSTYIMLFSLMFMFLFMFI 572
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
49-367 |
1.89e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 107.89 E-value: 1.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 49 MSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIIL---VSLFVLSMIFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLsalTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 126 VIY-YQNVKSANAGMLTALSNRVGDVFILLSISWM-LNFGSWNYVFYYdffFNSYDYSLVCFMVVLAGMTSSAQIPFSAW 203
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 204 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-----SPMLYFSgtsYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmdvlSPELWWG---VLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 278 SQLGLMMGILGL-------GYPLLSF-------FHLLIHALFKSLLFLCAGFYIHSVFDcQDIRYMGSLTFSMPYVSSCL 343
Cdd:PRK08667 304 ENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
2.67e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 103.62 E-value: 2.67e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 56 MSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSA 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFA 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 136 nagMLTA----LSNRVGDVFILLSIS-WMLNFGSWNY---VFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAA 207
Cdd:PRK08168 150 ---RLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 208 MAAPTPVSALVHSStLVTAGVYLLIRFSPMLYFSGTSYYLLL-FGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGI 286
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVlVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 1893869112 287 LGLGYPLLSFFHLLIHALFKSLLFLCAG 314
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
53-366 |
1.22e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 102.27 E-value: 1.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGY-----------MGLDFNsdrfiilvsLFVLSMIFLIISPNLISILLGWDGLGLV 121
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYfreyegkgpgaMGFFYN---------LFLASMVLVLLADDAFSFLVAWETMSLS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 122 SYCLVIYYQNVKS-ANAGMLTALSNRVGDVFILLSISWMlnfgsWNYVFYYDF----------FFNSydyslVCFMVVLA 190
Cdd:PRK06521 149 SWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYDFaamraahlspFWAS-----LVFLLALF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 191 GMTSSAQI-PFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS------PMLYfsgTSYYLLLFGCLTMFMSGLSA 262
Cdd:PRK06521 219 GFGAKAGLvPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllgaPGWW---WGVLVLALGAISAVLGVLYA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 263 NCEFDLKKIIALSTLSQLGLMMGILGL-------GYPLLS-------FFHLLIHALFKSLLFLCAGFYIHSVFDcQDIRY 328
Cdd:PRK06521 295 LAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLHATGT-RDMEK 373
|
330 340 350
....*....|....*....|....*....|....*...
gi 1893869112 329 MGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLIL 366
Cdd:PRK06521 374 LGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
57-451 |
8.50e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 99.60 E-value: 8.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 57 SLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQN----V 132
Cdd:PRK07390 91 TLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAqplvV 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 133 KSANAGMLTalsNRVGDVFILLSISWMLNF-GSWNYVFYYDFF----FNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAA 207
Cdd:PRK07390 171 TAARDAFLT---KRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 208 MAAPTPVSALvHSSTLVTAGVYLLIRFSPMLYFSG-TSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGI 286
Cdd:PRK07390 248 MEGPNPASIL-RNSVVVATGAWVLIKLQPVLALSPvALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 287 LGLGYPLLSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLIL 366
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 367 EFCSYNYMNCMVYFLFF-FSTGLTVMYSFRLFYYSLIKPFSFNVLRNFYYMNIDMNISM-FILLLSVILC--GSMLSWLI 442
Cdd:PRK07390 406 DGLWAVSPWLVGVLLLVnALTAFNLTRVFRLVFLGKPQQKTRRSPEVLWPMALPMVILAgFTLHLPLLLQqwGLLPSWEA 485
|
....*....
gi 1893869112 443 FPVPICIYL 451
Cdd:PRK07390 486 LNLWAAPLL 494
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-361 |
1.12e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 95.33 E-value: 1.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 186 MVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLL------FGCLTMFMSG 259
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwllavLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 260 LSANCEFDLKKIIALSTLSQLGLMmgILGLGY-----PLLSFFHLLIHALFKSLLFLCAGfYIHSVFDCQDIRYMGSLTF 334
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYI--LLGLALltplaLAAGLLHLLHHALMKGALFLAAG-AIEVTYGTRRLSELSGLGR 363
|
170 180
....*....|....*....|....*..
gi 1893869112 335 SMPYVSSCLNVSILSLCGFPFLSGFYS 361
Cdd:PRK08375 364 RMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
2.89e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 91.19 E-value: 2.89e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 52 ILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 132 VKSA-NAGMLTALSNRVGDVFILLSISWM------LNFGSWNYVFYYDFFFNSY----DYSLVCFMVVL----AGMTSSA 196
Cdd:PRK12667 159 RGDAvEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTGglagNPPLALGVALAlalwAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 QIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGTSYY---------LLLFGCLTMFMSGLSANCEF 266
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIdfraalspiLIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 267 DLKKIIALSTLSQLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCL 343
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAA-GTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869112 344 NVSILSLCGFPFLSGFYSSDLILE-FCSYNYMNCMVYFLFFfsTGLTVMYSFRLFY 398
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNaLLESGFYLPALVLLIA--SAISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-442 |
1.19e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 85.92 E-value: 1.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 133 -KSANAGMLTALSNRVGDVFILLSISwmLNFGSWNY----VFYYDFFFNSYDYSLVCFMVVLAGMT-SSAQIPFSAWLPA 206
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGTlnmaYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 207 AM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLYFSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQL 280
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 281 GLMM-----GILGLGYPLLS----------FFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNV 345
Cdd:PRK08376 324 GYMLlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 346 SILSLCGFPFLSGFYSSDLILEfcSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLrNFYYMNIDMNISMF 425
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVM-NVKEPPKPMLVPML 479
|
410
....*....|....*..
gi 1893869112 426 ILLLSVILCGsMLSWLI 442
Cdd:PRK08376 480 ILAIAIIGMG-LFPWQI 495
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-397 |
2.93e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 81.40 E-value: 2.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 53 LDWMSLVFMSFVLIISSMVFFYSNGYMGLDF--NSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 131 NVKSANAGM--LTALSNRVGDVFILLSISWMLNFGSWNYVFYYDFFFNSydySLVCFMVVLAGMTSSAQIPFSAWLPAAM 208
Cdd:PRK06589 161 NNISLSGGYkyLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQ---SIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 209 AAPTPVSALVHSSTLVTAGVYLLIRFSPMLY-------FSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLG 281
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqrIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 282 LMMGILGLGYPL---LSFFHLLIHALFKSLLFLCAGfYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSG 358
Cdd:PRK06589 318 LALLSAFILTPKalgAAILHLVSHSFAKICLFYSMG-SIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350
....*....|....*....|....*....|....*....
gi 1893869112 359 FYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYSFRLF 397
Cdd:PRK06589 397 FISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-367 |
4.25e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 81.15 E-value: 4.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYfsGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTL 277
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP--GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 278 SQLGLMmgilgLGYPLLSFFHLLIHALFKSLLFLCAGfYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSilslcGFPFLS 357
Cdd:PRK07234 279 SQLGFI-----LAAPLVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLTMASFSIA-----GFPLLA 347
|
170
....*....|
gi 1893869112 358 GFYSSDLILE 367
Cdd:PRK07234 348 GFVSKVLTLK 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
175-314 |
4.12e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 78.15 E-value: 4.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 175 FNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLYFSGTSYYLLLFGCLT 254
Cdd:PRK08601 198 LGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASIS 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1893869112 255 MFM-SGLSAnCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSFFHLLIHALFKSLLFLCAG 314
Cdd:PRK08601 277 VLIgTGISL-VQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
35-398 |
1.68e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.57 E-value: 1.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 35 IEWDIFSFNSSVVLMSIILDWMSLVFMsfVLIISSMVFFYSNGYMGldfNSDRFIILVSLFVLSMIFLIISPNLISILLG 114
Cdd:PRK08668 52 EKLTLFFGGFKLTFTLTHLSWFFAMIS--LLVIFSVAFFMVSEKTK---NDAYFNMFALMSLAGVLGVFLANDLLTLYIF 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 115 WDGLGLVSYcLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLN-FGSWNYVFYYDFFFN--SYDYSLVCFMVVLA- 190
Cdd:PRK08668 127 WEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdtSTGFALIVFLFLLAf 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 191 GMTSSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIR----------FSPMLYFSGTS---YYLLLFGCLTMF 256
Cdd:PRK08668 206 GVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLvlyvlpgtklFSEFGTYRGVPlfnYILAWLGNISII 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 257 MSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLT 333
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYRT-GTTKISEMGGLI 363
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1893869112 334 FSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGlTVMYSFRLFY 398
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG-SFLYVFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
63-396 |
2.30e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 75.57 E-value: 2.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 63 FVLIISSMVFFYS--NGYMGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAGML 140
Cdd:PRK08377 83 FVLIIAIVSFIMSifSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 141 TALSNRVGDVFILLSISWMLN-FGSWNYVFYYDFFFNSYDY-SLVCFMVVLAGMTSSAQI-PFSAWLPAA-MAAPTPVSA 216
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAGTIDPTvAQVGLALLIFGLAVEAELfPLNAWAPDAyQAAPHPITV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 217 LVhSSTLVTAGVYLLIRFSPMLY----FSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYP 292
Cdd:PRK08377 243 MF-SAFVVKAGLYAMARILYLMQnangWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 293 L---LSFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILeFC 369
Cdd:PRK08377 322 AgvdAGVFHMINHAIVKALLFLAVGYVGITL-GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LA 399
|
330 340
....*....|....*....|....*..
gi 1893869112 370 SYNYMNCMVYFLFFFSTGLTVMYSFRL 396
Cdd:PRK08377 400 GLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-361 |
1.87e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 72.84 E-value: 1.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 50 SIILDWMSLVFMSFVLIISSMVFFYSNGYM-GLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLeRRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 128 YYQNVKSANAGM----LTALSNrvgdVFILLSISWMLNF-GSWNYVFYYDFFFNSYDYS---LVCFMVVLAGM---TSSA 196
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLafkLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 qiPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLYFSGTSYYLLLFG---CLTMFMSGLSANCEFDLKKI 271
Cdd:COG1007 221 --PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAADWQLLLAvlaVLSMTVGNLAALAQTNVKRM 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 272 IALSTLSQLG-LMMGILGLGYPLLS--FFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSIL 348
Cdd:COG1007 297 LAYSSIAHAGyLLLGLAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
330
....*....|...
gi 1893869112 349 SLCGFPFLSGFYS 361
Cdd:COG1007 377 SLAGIPPTAGFFG 389
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.03e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 67.54 E-value: 1.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 198 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-----PMLYFSgtsYYLLLFGCLTMFMSGLSANCEFDLKKI 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSllggnAPLWWG---VALLVLGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 272 IALSTLSQLGLMMGILG-------LGYPLL-------SFFHLLIHALFKSLLFLCAGFYIHSVfDCQDIRYMGSLTFSMP 337
Cdd:PRK08042 273 LAYHTLENIGIILLGLGagvtgiaLEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|..
gi 1893869112 338 YVSSCLNVSILSLCGFPFLSGF 359
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-366 |
3.46e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 65.72 E-value: 3.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 199 PFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRF------SPMLYFSGTsyYLLLFGCLTMFMSGLSANCEFDLKKI 271
Cdd:PRK06458 232 PMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYyilidaAIGSDFPGR--LLLIFGLLSVLVAAFFLLRQRDIKRL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 272 IALSTLSQLGLMMGILGLGYPLLSF---FHLLIHALFKSLLFlCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSIL 348
Cdd:PRK06458 309 FAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170
....*....|....*...
gi 1893869112 349 SLCGFPFLSGFYSSDLIL 366
Cdd:PRK06458 388 AIAGMPPFGVFISEFLIL 405
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-366 |
1.73e-10 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 63.76 E-value: 1.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 108 LISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMlnfgswnYVFYYDFFFNSYD--YSLVCF 185
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLH-------YAETGSFAFGAIAglGGTAAW 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 186 MVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmlyFSGTsYYLLLFGCLTMFMSGLSANCE 265
Cdd:PRK12668 188 LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA-----FPGT-ELLIYIGAAMAVYGVFFALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 266 FDLKKIIALSTLSQLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHSVFDcQDIRYMGSLTFSMPYVSSC 342
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTALF 340
|
250 260
....*....|....*....|....
gi 1893869112 343 LNVSILSLCGFPFLSGFYSSDLIL 366
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
199-366 |
3.62e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.41 E-value: 3.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 199 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLYFSGTSYY---LLLFGCLTMFMSGLSANCEFDLKKIIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFPEASAYFaplLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 275 STLSQLGLMM---------GILGlgypllSFFHLLIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNV 345
Cdd:COG1008 306 SSVSHMGFVLlgifalnplGLQG------AVLQMVSHGLITAALFLLVGV-LYDRTHTRDIADLGGLAKRMPVLAALFLL 378
|
170 180
....*....|....*....|.
gi 1893869112 346 SILSLCGFPFLSGFYSSDLIL 366
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-314 |
4.20e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.08 E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 182 LVCFMVVLAGMTSSAQI-PFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGT----SYYLLLFGCLTM 255
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLvPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqfSNVLIGLGIFSI 284
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1893869112 256 FMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLLSF---FHLLIHALFKSLLFLCAG 314
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG 346
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
203-359 |
1.04e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.12 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 203 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYF---SGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQ 279
Cdd:PRK12663 228 WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 280 LGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHsVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFL 356
Cdd:PRK12663 308 IGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPF 386
|
...
gi 1893869112 357 SGF 359
Cdd:PRK12663 387 SGF 389
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-400 |
5.79e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 58.42 E-value: 5.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 183 VCFMVVLAgmTSSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGTS---YYLLLFGCLTMFMS 258
Cdd:PRK07691 213 ILFLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 259 GLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPLL---SFFHLLIHALFKSLLFLCAGFYIHsVFDCQDIRYMGSLTFS 335
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1893869112 336 MPYVSSCLNVSILSLCGFPFLSGFYSSDLILE--FCSYNYMNCMVYFLfffsTGLTVMYS-FRLFYYS 400
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEgtFEAGFYVSGIIVLL----SSLLVLYSvIKIFLKG 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
196-359 |
1.78e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.29 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 196 AQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLF-GCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK12665 224 AVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVvALLTMVVGILGAIAQSDIKRLLS 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPL-LS--FFHLLIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:PRK12665 303 FTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVVGL-IERQAGSSSLRRLGGLAKASPLLAVLFFVPALNL 381
|
....*....
gi 1893869112 351 CGFPFLSGF 359
Cdd:PRK12665 382 GGIPPFSGF 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-360 |
4.66e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 55.60 E-value: 4.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 50 SIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDrFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGM----LTALSNrvgdVFILLSISWMLNF-GSWNYVFYYDFFFNSYDYSL-----VCFMVVLAGMTSSAqI 198
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALAS----GFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSLlllfgLVFLLVGLAFKLSA-V 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 199 PFSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLYFSGT---SYYLLLFGCLTMFMSGLSANCEFDLKKIIAL 274
Cdd:PRK05777 222 PFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSedwQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 275 STLSQLG-LMMGILGLGYPLLS--FFHLLIHALFKSLLFLCAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLC 351
Cdd:PRK05777 301 SSIAHAGyLLVGLAAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLA 380
|
....*....
gi 1893869112 352 GFPFLSGFY 360
Cdd:PRK05777 381 GIPPTAGFW 389
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-411 |
1.41e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.41 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 60 FMSFVLIISSMVFFYSNGY-MGLDFNSDRFIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 139 MLTalsnrvgdvFILLSISWMLNFGSWNYVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPF--SAWLPAAMAAPTPVSA 216
Cdd:PRK06459 125 FMA---------FGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 217 LVHSSTLVTAGVYLLIRF------SPMLYFSgtsYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGL- 289
Cdd:PRK06459 196 AILSATMTLMGVYGILKMtiltqtIPIGYFG---LTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLy 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 290 -----------GYPLLS-FFHLLIHALFKSLLFLCAGFyihsvFDCQDIRYMGSLTFSMPYVSSCLnvSILSLCGFPFLS 357
Cdd:PRK06459 273 mvtkqlitsieHFSLITvILYSFAHSVAKTGLFLSSGL-----QEKQSITYSKKIRNRWIELGLTL--LASSLSGLLPNI 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1893869112 358 GFYSSDLILE-FCSYNYMNCMVYFLFFFSTGLTVMYSFRLFYYSLIKPFSFNVLR 411
Cdd:PRK06459 346 GGVASWLLLEsLFMFAYVLHNVISILFIVTGAIIAMGEGLATALLIKYITYTSLF 400
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
88-366 |
5.32e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 52.25 E-value: 5.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 88 FIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWM--LNFGSW 165
Cdd:TIGR01972 108 FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 166 NYVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGTS 244
Cdd:TIGR01972 188 DLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNLPLFPDASL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 245 YY---LLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMM---------GILGlgypllSFFHLLIHALFKSLLFLC 312
Cdd:TIGR01972 267 YFapvLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlgifsfnelGISG------AVFQMISHGLITAALFLL 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1893869112 313 AGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLIL 366
Cdd:TIGR01972 341 VGV-LYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-367 |
7.16e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 7.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 222 TLVTAGVYLLIRFSPMLYFSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLMMGILGLGYPL---LSFFH 298
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFH 323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869112 299 LLIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFYSSDLILE 367
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
198-366 |
1.79e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.50 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 198 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFS-PML--YFSGTSYYLLLFGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLG-LMMGILGLGYPLLS--FFHLLIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIQgaIFQMISHGLSSAALFLLVGV-LYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170
....*....|....*.
gi 1893869112 351 CGFPFLSGFYSSDLIL 366
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
40-443 |
3.40e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 46.65 E-value: 3.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 40 FSFNSSVVLMSIILDWMSLVF-----MSFVLIIS-SMVFFYSNGYMGLDFnsdRFIILVSLFVLSMIFLIISPNLISILL 113
Cdd:PRK12664 14 FFGLIFIVLPLLLYDWSEPVYnldlvLFIVLSFSlALIFLYILPIKNMRF---SEMLCYLLYYISSIAAISSSSLTLVVI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 114 GWDGLGLVSYCLVIYYQNVKSANAGMLTALSNRVGDVFILLSISWMLNFGSWNyvfyydfffnsyDYSLVCFMVVLagMT 193
Cdd:PRK12664 91 GFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT------------GYCKLLFMLGL--LI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 194 SSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmlyFSGTSYyLLLFGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK12664 157 NCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF-----FSGEEI-LLFLGIITAIYGIIFASLEQNIRRLLC 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPL-----LSFFHLLIHALFKSLLFLCAGFYIHSVFDCqDIRYMGSLtFSMPYVSSCLNVSIL 348
Cdd:PRK12664 231 YNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKF-NLNRVGGL-FKMSLEAMCCIIAIL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 349 SLCGFPFLSGFYSSDLILEFCSYNYMNCMVYFLFFFSTGLTVMYS--FRLFYYSLIKPFSFNVLrnFYYMNIDMNISMFI 426
Cdd:PRK12664 309 NMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASvgLKFFWYAFISKSKSKPE--AEKVYIGSKLSMII 386
|
410
....*....|....*..
gi 1893869112 427 LLLSVILCGSMLSWLIF 443
Cdd:PRK12664 387 LVLICVVLGMFNSYLLF 403
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
197-450 |
1.37e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 44.67 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYY---LLLFGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFaplIVMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLM-MGILGLGYPLL--SFFHLLIHALFKSLLFLcAGFYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSL 350
Cdd:MTH00204 305 YSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 351 CGFP----FLSGFYSsdlILEFCSYNYMNCMvyflfFFSTGLTVMYSFRLFYYSLIkpfSFNVLRNFYYMNIDMN----I 422
Cdd:MTH00204 384 MGFPlscnFVGEFFS---LLAAFEYSLGLGV-----LVTSGMVWSAAYSLYLYNRI---SFGGGSNYLLFSRDLNrrelL 452
|
250 260
....*....|....*....|....*...
gi 1893869112 423 SMFILLLSVILCGSMLSWLIFPVPICIY 450
Cdd:MTH00204 453 AILPLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
88-360 |
1.69e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 44.22 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 88 FIILVSLFVLSMIFLIISPNLISILLGWDGLGLVSYCLVIYY-QNVKSANAGMLTALSNRVGDVFILLSISWM--LNFGS 164
Cdd:CHL00049 113 FLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGE 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 165 WNYVFYYDFFFNSYDY-------SLVCFMVVLAGMTSSAqiPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSP 236
Cdd:CHL00049 193 IELQEIVNGLINTQMYnspgisiALIFITVGIGFKLSLA--PFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 237 MLYFSGTSYYLLLFG---CLTMFMSGLSANCEFDLKKIIALSTLSQLG-LMMGILGlGYPLLSFFHLLIHALFKSLLFLC 312
Cdd:CHL00049 270 IPFYFSSNEWHLLLEilaILSMILGNLIAITQTSMKRMLAYSSIGQIGyVIIGIIV-GDSNDGYASMITYMLFYIFMNLG 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1893869112 313 AgfyihsvFDC----------QDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFLSGFY 360
Cdd:CHL00049 349 T-------FACivlfglrtgtDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
198-365 |
7.42e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 7.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 198 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLYFSGTSY---YLLLFGCLTMFMSGLSANCEFDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYlapWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 274 LSTLSQLGLMMGILGLGYPL---LSFFHLLIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSL---TFSMPYVSSCLNVSI 347
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVGV-VYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
170
....*....|....*...
gi 1893869112 348 LSLCGFPFLSGFYSSDLI 365
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLV 397
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
40-88 |
9.90e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 37.41 E-value: 9.90e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1893869112 40 FSFNSSVVLMSIILDWMSLVFMSFVLIISSMVFFYSNGYMGLDFNSDRF 88
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-361 |
1.62e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 41.26 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 52 ILDWMSLVFMSFVLIISSMVFFYSNGYmglDFNSDRFIILVSLFVLS---MIFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRK---EISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 129 YQNVKSANAGMLTALSNRVGDVFILLSISWM------LNFGSWNYVFYYDFFFNSYDYSLVCFMVVLagMTSSAQIPFSA 202
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLyaitgtLNMGDMFLIIQDLPTNRAIQIGVLFIMVGL--FIKAALFPFHK 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 203 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLYFSGTSYYLLLFGCLTMFMSGLS-------ANCEFDLKKIIALS 275
Cdd:PRK12662 231 WLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 276 TLSQLGLMMGILGLG--YPLLS-FFHLLIHALFKSLLFLCAGfYIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCG 352
Cdd:PRK12662 311 SISHIGYIILAVSLNtyYGLAAaVAYIVNHSIVKSALFMVSG-SISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIG 389
|
....*....
gi 1893869112 353 FPFLSGFYS 361
Cdd:PRK12662 390 MPPTSGFVA 398
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
147-447 |
3.60e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 40.04 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 147 VGDVFILLSISWMLNF-GSWNYVFYYDFFFNSYDYSLVCFMVVLAGMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVT 225
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 226 AGVYLLIRFSPMLYFSGTSYY---LLLFGCLTMFMSGLSANCEFDLKKIIALSTLSQLGLM-MGILGLGYPLL--SFFHL 299
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFsplIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869112 300 LIHALFKSLLFLCAGFyIHSVFDCQDIRYMGSLTFSMPYVSSCLNVSILSLCGFPFlsgfySSDLILEFCS-YNYMNCMV 378
Cdd:MTH00217 331 LAHGLVSSALFIAVTF-LYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL-----SCNFVGEFLSlLAAFEYSY 404
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869112 379 YFLFFFSTGLTVMYSFRLFYYSLIkpfSFNVLRNFYYMNIDMN----ISMFILLLSVILCGsmlswlIFPVPI 447
Cdd:MTH00217 405 IVGVLASLGMVLSAGYSIYLYNRV---CFGAPSKYLYFSRDLNrrefYVLLPLVFLIYLMG------IFPFII 468
|
|
| |
