|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
7.46e-131 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 384.89 E-value: 7.46e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 1 MLMFLFSLLFMVPLSVL-NFWWLYLSWLFFLSFVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVY 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLkNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 80 MSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILW 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 160 MYIYLGGLCYFLLFDLCN-SFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILF 238
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 239 YSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNI 318
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 319 SYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYS 398
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 1893869113 399 YTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFLC 436
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILK 438
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
34-441 |
1.64e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 336.81 E-value: 1.64e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 34 FIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYL 113
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 114 FFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLG----GLCYFLLFDLCNSFYFYLSMILAF 189
Cdd:MTH00150 83 FFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGssfmLLISSLRKLLSSMGLWGLLVFLAF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 190 LVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLK 269
Cdd:MTH00150 163 LVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 270 MLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLT 349
Cdd:MTH00150 243 SLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFC 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 350 SSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYSYTQHGYFYSGLYSVSCCYFSEFHLLLLHWFP 429
Cdd:MTH00150 323 IINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVP 402
|
410
....*....|..
gi 1893869113 430 LNILFLCCNYYN 441
Cdd:MTH00150 403 LLLLILKSDLLF 414
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
1.67e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 315.00 E-value: 1.67e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 1 MLMFLFSLLFMVPLSVLNFWWLYLSWLFFLSFVF--IFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSV 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFssFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 79 YMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCIL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 159 WMYIYLGGLCYFLLFDLCNS----FYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSdfylFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 235 CILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 315 LSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1893869113 395 YLYSYTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-436 |
2.12e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 314.76 E-value: 2.12e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 1 MLMFLFSLLFMVPLSVLNFWWLYLSWLFFLS-FVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVY 79
Cdd:MTH00014 4 LIMPLISLLLLPLIKYPWSWALTFSTLLLLSlFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 80 MSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILW 159
Cdd:MTH00014 84 QNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 160 MYIYLGGLCYFLLFDLCNSFYFY----LSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKC 235
Cdd:MTH00014 164 IFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 236 ILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCL 315
Cdd:MTH00014 244 FMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 316 SNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLY 395
Cdd:MTH00014 324 ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLF 403
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1893869113 396 LYSYTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFLC 436
Cdd:MTH00014 404 LYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILK 444
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
87-436 |
7.65e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 300.57 E-value: 7.65e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGG 166
Cdd:MTH00124 94 TFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 167 LCYFLLF----DLCNSFY---FYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFY 239
Cdd:MTH00124 174 LSLPMLQlthpTLTNSWTnllLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 240 SLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNIS 319
Cdd:MTH00124 254 SNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTN 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 320 YDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYSY 399
Cdd:MTH00124 334 YERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLS 413
|
330 340 350
....*....|....*....|....*....|....*..
gi 1893869113 400 TQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFLC 436
Cdd:MTH00124 414 TQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
87-435 |
6.20e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 295.67 E-value: 6.20e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGG 166
Cdd:MTH00068 94 TYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGS 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 167 LCYFLLFDLCNSFY-------FYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFY 239
Cdd:MTH00068 174 LSLILLELMSPMQLmtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 240 SLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNIS 319
Cdd:MTH00068 254 SKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTN 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 320 YDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYSY 399
Cdd:MTH00068 334 YERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLM 413
|
330 340 350
....*....|....*....|....*....|....*.
gi 1893869113 400 TQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00068 414 TQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
3.95e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 280.71 E-value: 3.95e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 1 MLMFLFSLLFMVPLSVLNFWW---LYLSWLFFLSFVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSS 77
Cdd:MTH00044 4 LILLSLGIAITSWIVPKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASIN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 78 VYMSSYFSA--MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLS 155
Cdd:MTH00044 84 HLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 156 CILWMYIYLGGLcYFLLFDLCNSFYFYLSM--------ILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGY 227
Cdd:MTH00044 164 SLIAIYSSSSSL-SIPLSELNWLTSLSSNSssiwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 228 GLIRVFKCILFYSLSF-NYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHG 306
Cdd:MTH00044 243 GLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 307 LCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFS 386
Cdd:MTH00044 323 LVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLAT 402
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1893869113 387 FFSCAYSLYLYSYTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00044 403 VFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIII 451
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
7.12e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 277.21 E-value: 7.12e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 1 MLMFLFSLLFMVPLSVLNFWWLYLSWLFFLSFVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYM 80
Cdd:MTH00206 5 PLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 81 SSYFS--AMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCIL 158
Cdd:MTH00206 85 NEPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 159 WMYIYLGGLCYFLLFDLCNSFYF----YLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFK 234
Cdd:MTH00206 165 FLQNSLGSLSLYILYFSKLTTWNnnlwWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIIL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 235 CILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFC 314
Cdd:MTH00206 245 ILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 315 LSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSL 394
Cdd:MTH00206 325 LANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1893869113 395 YLYSYTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00206 405 YMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLIL 445
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
87-435 |
2.13e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 268.68 E-value: 2.13e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGG 166
Cdd:MTH00110 94 LYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGS 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 167 LCYFLL--------FDLCNSFyFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILF 238
Cdd:MTH00110 174 LNFLLLqlwaqplpNSWSNNL-LWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 239 YSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNI 318
Cdd:MTH00110 253 LTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 319 SYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYS 398
Cdd:MTH00110 333 NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLI 412
|
330 340 350
....*....|....*....|....*....|....*..
gi 1893869113 399 YTQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00110 413 TTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
87-435 |
1.60e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 235.24 E-value: 1.60e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGG 166
Cdd:MTH00127 95 MYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 167 LCYF-------LLFDLCNSFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFY 239
Cdd:MTH00127 175 LSMLtlqysqpLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPL 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 240 SLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNIS 319
Cdd:MTH00127 255 TKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTN 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 320 YDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYSY 399
Cdd:MTH00127 335 YERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLM 414
|
330 340 350
....*....|....*....|....*....|....*.
gi 1893869113 400 TQHGYFYSGLYSVSCCYFSEFHLLLLHWFPLNILFL 435
Cdd:MTH00127 415 TQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLIL 450
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-397 |
8.48e-60 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 202.62 E-value: 8.48e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 46 GLGFNLGLDFFSWLMVLLSFWIcsLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLL 125
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALL--TPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 126 ILGWGYqPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLcYFLLFDLCNS-------FYFYLSMILAFLVKLPMYMF 198
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGAL-TFDIAELAAAplpltaqLLLFLAFFIAFAVKVPMFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 199 HLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVfkCILFY---SLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYS 275
Cdd:COG1008 229 HTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF--ALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 276 SVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSA 355
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1893869113 356 PPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLY 397
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
88-397 |
1.03e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 197.21 E-value: 1.03e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 88 FMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGL 167
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 168 CYFLL----FDLCNSFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILFYSLSF 243
Cdd:MTH00204 194 DYQILlnikLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLR-FSWPLFPAASE 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 244 NYY--LVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYD 321
Cdd:MTH00204 273 YFAplIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYE 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869113 322 RLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLY 397
Cdd:MTH00204 353 RHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
88-397 |
2.66e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 187.95 E-value: 2.66e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 88 FMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGL 167
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 168 CYFLL----FDLCNSFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILFYSLS- 242
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIR-FSWPLLPEASe 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 243 -FNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYD 321
Cdd:MTH00217 270 yFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869113 322 RLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLY 397
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-397 |
3.80e-53 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 185.41 E-value: 3.80e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 46 GLGFNLGLDFFSWLMVLLSFWIcsLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLL 125
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALL--TPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 126 ILGWGYqPERVSASMYLIFYTILASLPLLSCILWMY-IYLGGLCYFLLFDLCNS-------FYFYLSMILAFLVKLPMYM 197
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvVYYNATGTFDIADLLNLplppgvqYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 198 FHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILF--YSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYS 275
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLR-FSLPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 276 SVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSA 355
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1893869113 356 PPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLY 397
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-380 |
1.01e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 178.66 E-value: 1.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 105 SVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFLLFDLCN------- 177
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 178 SFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSFNYYLVIFSLYGGVL 257
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 258 ISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLS-NISYDRLGSRLFFLNKGLLS 336
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1893869113 337 YMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMI 380
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLV 284
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-397 |
5.25e-52 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 181.68 E-value: 5.25e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 46 GLGFNLGLDFFSWLMVLLSFWIcsLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLL 125
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALL--TLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 126 ILGWGyQPERVSASMYLIFYTILASLPLLSCILWMYiYLGGLCYFLLFDLCNSFYF------YLSMILAFLVKLPMYMFH 199
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLELLNLPLPFgvqtwlFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 200 LWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILF--YSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSV 277
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLR-FNLPLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 278 SHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPP 357
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1893869113 358 SLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLY 397
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
88-364 |
1.78e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 162.01 E-value: 1.78e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 88 FMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGL 167
Cdd:MTH00226 133 FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTT 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 168 CYFLLFDlCNSF-------YFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCIL-FY 239
Cdd:MTH00226 213 DYLTLAS-CSHVvseqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 240 SLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNIS 319
Cdd:MTH00226 292 AQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTIL 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1893869113 320 YDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGE 364
Cdd:MTH00226 372 YDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-434 |
6.55e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 152.75 E-value: 6.55e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 19 FWWLYLSWLFFLSFVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYFSAMFMFVILFLlls 98
Cdd:MTH00094 4 LFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFV--- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 99 lccafsSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGglcyFLLFDLCNS 178
Cdd:MTH00094 81 ------SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFS----LCYFDFFLS 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 179 FYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYslsFNYYLVIFSLYGGVLI 258
Cdd:MTH00094 151 WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILS 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 259 SLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYM 338
Cdd:MTH00094 228 SFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 339 PSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSLYLYSYTQHGYFYSGLYSVSCCYFS 418
Cdd:MTH00094 308 MFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSL 387
|
410
....*....|....*.
gi 1893869113 419 EFHLLLLHWFPLNILF 434
Cdd:MTH00094 388 PLVFMMFNMFWLSLFY 403
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
103-380 |
5.70e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.84 E-value: 5.70e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 103 FSSVSLFGFYLFFEFSLIPTLLLILGWGYQpERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFLLFDLCNSFY-- 180
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYpv 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 181 -----FYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLS-FNYYLVIFSLYG 254
Cdd:CHL00011 208 aleilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSiFSPWLVIVGAIQ 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 255 GVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLgsRLFFLNK-- 332
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmg 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1893869113 333 GLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMI 380
Cdd:CHL00011 366 GIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLM 413
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
94-377 |
2.86e-33 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 130.92 E-value: 2.86e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 94 FLLLSLCCA----FSSVSLFGFYLFFEFSLIPTLLLILGWGYQpERVSASMYLIFYTILASLPLLSCILWMYIYlGGLCY 169
Cdd:PRK12561 91 FLMLVLYSAqigvFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALS-GDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 170 FLLFDLCNSFY-------FYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYS-L 241
Cdd:PRK12561 169 FDLAELGAKSYplalellLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAhV 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 242 SFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYD 321
Cdd:PRK12561 249 YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYE 328
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869113 322 RLGSRLFFLNKGLLSYMPSMsmwWFLLTSSNMSA---PPSLNLIGELSLFIGLVSYSYY 377
Cdd:PRK12561 329 RTHTLSIPNMGGLAKVMPKT---FALFTASSMASlalPGMSGFVSELTVFLGITSSDVY 384
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
46-380 |
1.35e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 125.26 E-value: 1.35e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 46 GLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLL 125
Cdd:COG0651 67 PFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 126 ILGWGYqPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFLL---FDLCNSFYFYLSMIL---AFLVKLPMYMFH 199
Cdd:COG0651 147 VALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarLAELDPGLLLAAFALllvGFGIKAALFPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 200 LWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCIL--FYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSV 277
Cdd:COG0651 226 FWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 278 SHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPsMSMWWFLLTSSNMSA-P 356
Cdd:COG0651 306 SQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP-LTAAAFLIGALALAGlP 384
|
330 340
....*....|....*....|....
gi 1893869113 357 PSLNLIGELSLFIGLVSYSYYLMI 380
Cdd:COG0651 385 PLSGFVSKWLLLQAALEAGAWLLA 408
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
87-377 |
3.37e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 119.43 E-value: 3.37e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQpERVSASMYLIFYTILASLPLLSCILWMYIYlGG 166
Cdd:PRK02546 116 LFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFY-GD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 167 LCYFLLFDLCNSFY-------FYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILF- 238
Cdd:PRK02546 194 TPTFDMTALAAKDFglgfqllCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLp 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 239 -YSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSN 317
Cdd:PRK02546 273 dAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVG 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 318 ISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYY 377
Cdd:PRK02546 353 ATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAY 412
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
92-369 |
6.82e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.79 E-value: 6.82e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 92 ILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQpERVSASMYLIFYTILASLPLLSCILWMyIYLGGLCYFL 171
Cdd:PRK06473 113 LLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGL-VWLSGASSFD 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 172 L-------FDLCNSFYFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSF- 243
Cdd:PRK06473 191 YeplrshtLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYl 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 244 ----NYYLVIFSLYGgvliSLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNIS 319
Cdd:PRK06473 271 apwlATWAVVSVLYG----ASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVV 346
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1893869113 320 YDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFI 369
Cdd:PRK06473 347 YKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
45-369 |
7.59e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.70 E-value: 7.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 45 VGLGFNLGLDFFSWLMVLLSfwiCSLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLL 124
Cdd:PRK07363 69 LGLSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 125 LILGWGYQpERVSASMYLIFYTILASLPLLSCILWMyIYLGGLCYFLL-------FDLCNSFYFYLSMILAFLVKLPMYM 197
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGI-VWLSGSTSFDYdaistqnLSLNTQLILLTGLLLGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 198 FHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILF------YSLSFNYYLVIFSLYGgvliSLVCLRQVDLKML 271
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLFpqtwslVAPGLAIIGTISVIYG----ALSAIAQKDIKRM 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 272 IAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSS 351
Cdd:PRK07363 299 VAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLA 378
|
330
....*....|....*...
gi 1893869113 352 NMSAPPSLNLIGELSLFI 369
Cdd:PRK07363 379 GMASAGIPGLVGFVAEFI 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
46-373 |
3.91e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 89.55 E-value: 3.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 46 GLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYfsAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLL 125
Cdd:PRK08375 68 GIGIELRADSLSALFLLVTSILAIAALLYAIGYGEHRQ--TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 126 ILGWGYQPERVSASMYLIFYTILASLPLLSCILwMYIYLGGLCYFLLFDLCNS-------FYFylsMILAFLVKLPMYMF 198
Cdd:PRK08375 146 VAMGGDRRALAAARKYLIVGLIGSTFLLIGVGL-LYGVTGTLNMADLAGALAEnptvvtaFGF---VLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 199 HLWLPKAHVEAPISGSMILAGILLKLGGYGLIR----VFKCILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAY 274
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 275 SSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMS 354
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330
....*....|....*....
gi 1893869113 355 APPSLNLIGELSLFIGLVS 373
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVE 400
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
19-378 |
1.05e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 81.51 E-value: 1.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 19 FWWLYLSWLFFLSFVFIFMGDFSFTYVGLGFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYFSAMFMFVILFLLLS 98
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 99 LCCA---FSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYiYLGGLCYFLLFDL 175
Cdd:MTH00062 81 LIFSilcFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLS-LVNGSFNFSDWGS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 176 CNSFYF--YLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVfkCILFYSLSFNYYLVIFSLY 253
Cdd:MTH00062 160 DDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRF--CGFIFSGSFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 254 gGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKG 333
Cdd:MTH00062 238 -SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKS 316
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1893869113 334 LLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYL 378
Cdd:MTH00062 317 GINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYL 361
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-380 |
1.16e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 75.78 E-value: 1.16e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 185 MILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSFNYY-------LVIFSLYGGVL 257
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFraalspiLIILGAVSAII 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 258 ISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSY 337
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1893869113 338 MPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMI 380
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPA 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
96-368 |
2.02e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.54 E-value: 2.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 96 LLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFLLFDL 175
Cdd:PRK08667 121 ILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGAS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 176 CNSFYF-YLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSFNYYLVIFSLYG 254
Cdd:PRK08667 201 AGILSLvFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSIS 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 255 GVLISLVCLRQVDLKMLIAYSSVSHMSLV-----------ISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRL 323
Cdd:PRK08667 281 ALLGVIYALKEHDLKGLLAYSSIENIGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHAT 360
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1893869113 324 GSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLF 368
Cdd:PRK08667 361 GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
24-313 |
1.01e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.94 E-value: 1.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 24 LSWLFFLSFVFIFMGDFSFTYV----GLGFNLGLDFFSWLMVLLSFWIcsLVLLVSSSVYMSSYFSAMFMFVILFLLLSL 99
Cdd:PRK08668 34 LPLLFLIKLYFTLKVGTGEKLTlffgGFKLTFTLTHLSWFFAMISLLV--IFSVAFFMVSEKTKNDAYFNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 100 CCAFSSVSLFGFYLFFEFSLIPTLLLILgWGYQPERVSASMYLIFYTILASLPLLScILWMYIYLGGLCY-----FLLFD 174
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYAMLYA-IFLIYAKTGTFDFadisqGLIND 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 175 LCNSF--YFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCI----LFYSLS------ 242
Cdd:PRK08668 190 TSTGFalIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpgtkLFSEFGtyrgvp 269
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1893869113 243 -FNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLF 313
Cdd:PRK08668 270 lFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-351 |
2.08e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 65.72 E-value: 2.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 199 HLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvFKCILFYSLSFN---YYLVIFSLYGGVLISLVCLRQVDLKMLIAYS 275
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869113 276 SVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSmwWFLLTSS 351
Cdd:PRK06458 313 SIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG--WGLMLGA 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-378 |
4.14e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 4.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 182 YLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFkCILFYSLSFNYYLVIFSLYGGVLISLV 261
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS-ALLRQSGAAEQFSNVLIGLGIFSIAVA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 262 C---LRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYM 338
Cdd:PRK08676 288 AfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1893869113 339 PSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYL 378
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWL 407
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-372 |
1.32e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 1.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 86 AMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLiLGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLG 165
Cdd:PRK12665 111 SIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 166 GLCyflLFDLCNSF---------YFYLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVfKCI 236
Cdd:PRK12665 190 TLN---MADLAVRLdelpsgtrtALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRT-HTL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 237 LFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLS 316
Cdd:PRK12665 266 LFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVV 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869113 317 NI--------SYDRLGsrlfflnkGLLSYMPSMSMWWFLltssnmsapPSLNL--IGELSLFIGLV 372
Cdd:PRK12665 346 GLierqagssSLRRLG--------GLAKASPLLAVLFFV---------PALNLggIPPFSGFIGKV 394
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-351 |
1.90e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 56.11 E-value: 1.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 86 AMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLiFYTILAslpllscilwMYIYLG 165
Cdd:PRK07234 94 RFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL-FYSNVA----------MLFYLI 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 166 GLCyfLLFDLCNSFYFY-LSM---------ILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRvfkC 235
Cdd:PRK07234 163 GAV--LVYQANGTFAFSgLATadpeafaliALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR---C 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 236 ILfysLSFNYYLV--IFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSfygsifmmVGHGLCSSGLF 313
Cdd:PRK07234 238 AL---DVPGLDLIvrIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYA--------LAHGLVKSTLF 306
|
250 260 270
....*....|....*....|....*....|....*...
gi 1893869113 314 CLSnisyDRLGSRLFflnKGLLSYMPSMSMWWFLLTSS 351
Cdd:PRK07234 307 LCA----GALPSRNF---TELISQMLGIGKWIPLTMAS 337
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-362 |
2.69e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.90 E-value: 2.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 108 LFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLScILWMYIYLGGL----CYFLLFDLCNSFYFYL 183
Cdd:PRK12662 132 VFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIG-IGFLYAITGTLnmgdMFLIIQDLPTNRAIQI 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 184 SMILAFL---VKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCI-----LFYSLSFNYYLVIFSLYGG 255
Cdd:PRK12662 211 GVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 256 VLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSN-ISYdRLGSRLFFLNKGL 334
Cdd:PRK12662 291 VFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsISY-HFGTTKLEDCLNL 369
|
250 260
....*....|....*....|....*...
gi 1893869113 335 LSYMPSMSMWWFLLTSSNMSAPPSLNLI 362
Cdd:PRK12662 370 WKSMPKITLAFVLLSLSLIGMPPTSGFV 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-360 |
4.33e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.10 E-value: 4.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 108 LFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFLLFDLCNSFYFYLSMI- 186
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIa 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 187 LAFLV-----KLPMYMFHLWLPKAHVEAPISGSMILagILLKLGG-YGLIRVfkCILFYSLSFN-----YYLVIF---SL 252
Cdd:PRK08376 223 LALFIaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINlatvgWVIIILgclTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 253 YGGVLISLVclrQVDLKMLIAYSSVSH---------MSLVISGLFTMNIYSFY---GSIFMMVGHGLCSSGLFCLSNISY 320
Cdd:PRK08376 299 FVGVAMAVV---QKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVI 375
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1893869113 321 DRLGSRLFFLNKGLLSYMPsMSMWWFLLTSSNMSAPPSLN 360
Cdd:PRK08376 376 YETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-394 |
5.74e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.96 E-value: 5.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 92 ILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILgWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGLCYFL 171
Cdd:PRK12663 114 ILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 172 LFDLCNSF-------YFYLSMILAFLVKLPMYMFHlWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFkCILFYSLSFN 244
Cdd:PRK12663 193 IAMRLNDMgdtatltTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF-TLLFPQEREL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 245 YYLVIFSLYGGVLI--SLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDR 322
Cdd:PRK12663 271 LHPLLATMAAITMVigALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRL 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1893869113 323 LGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSL 394
Cdd:PRK12663 351 TGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
88-360 |
1.10e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 54.38 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 88 FMFVILFLLLSLCCAFSSVSLFgFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWMYIYLGGL 167
Cdd:PRK12646 113 YFYLTLFMFSMIGIVLSDNTIL-MYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 168 CYFLLF---DLCNSFYFYLSMILAFLV----KLPMYMFHLWLPKAhVEAPISGSMILAGILLKLGGYGLIRVFKCILFYS 240
Cdd:PRK12646 192 NITEILgqaDHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 241 LSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVIS-----GLFTMN---------IYSFYGSIFMMVGHG 306
Cdd:PRK12646 271 NMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHqqdaiasiyVFVLFAALFHLMNHA 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1893869113 307 LCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMwWFLLTSSNMSAPPSLN 360
Cdd:PRK12646 351 IFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
183-360 |
1.34e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 50.66 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 183 LSMILAFL---VKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRV-FKCILFYSLSFNYYLVIFSLYGGVLI 258
Cdd:PRK06521 211 LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 259 SLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYG-----------SIFMMVGHGLCSSGLFCLSNISYDRLGSRL 327
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAYGmpllaalaltaALYHLLNHALFKSLLFLGAGAVLHATGTRD 370
|
170 180 190
....*....|....*....|....*....|...
gi 1893869113 328 FFLNKGLLSYMPSMSmWWFLLTSSNMSAPPSLN 360
Cdd:PRK06521 371 MEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
184-377 |
6.37e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 48.22 E-value: 6.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 184 SMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKcILFYSLSFN---YYLVIFSLYGGVLISL 260
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILY-LMQNANGWSsvlKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 261 VCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPS 340
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPL 369
|
170 180 190
....*....|....*....|....*....|....*..
gi 1893869113 341 MSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYY 377
Cdd:PRK08377 370 TALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYT 406
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-233 |
9.39e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 47.97 E-value: 9.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 108 LFGFYLFFEFSLIPTLLLILGWGyQPERVSASM-YLIFYTILASLpLLSCILWMYIYLGGLCyFLLFDLCNSFYFYLSMI 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFA-FGAIAGLGGTAAWLILI 191
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1893869113 187 lAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVF 233
Cdd:PRK12668 192 -GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF 237
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-326 |
1.15e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 198 FHLWLPKAHVEA-PISgSMILAGILLKLGGYGLIRvFKCILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSS 276
Cdd:PRK12650 227 FHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLR-FSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1893869113 277 VSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSR 326
Cdd:PRK12650 305 VSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTR 354
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-394 |
3.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.10 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 48 GFNLGLDFFSWLMVLLSFWICSLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLIL 127
Cdd:PRK07691 70 GIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 128 GWGYQPERVSASMYLIFyTILASLPLLSCILWMYIYLGGLCyflLFDLCN-------------SFYFYLSMILaFLVKLP 194
Cdd:PRK07691 150 IGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLN---MADISVkiaelsagqtgliTVVAILFLFV-FATKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 195 MYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILFYSLSFNYYLVIFslYGGVLISLVCL---RQVDLKML 271
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILI--LALLTIIFGVIgavAYFDIKKI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 272 IAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSS 351
Cdd:PRK07691 303 IIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALS 382
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1893869113 352 NMSAPPSLNLIGELSLFIGLVSYSYYLMIFLFFFSFFSCAYSL 394
Cdd:PRK07691 383 LAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
105-347 |
9.32e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.58 E-value: 9.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 105 SVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFyTILASLPLLSCILWMYIYLGGLCYFLLFDLCNS--FYFY 182
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSGLHGSlkYLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 183 LSMILAFLVKLPMYMFHLWLPKAhVEAPISGSMIL-AGILLKLGGYGLIRVFKCILFYSLSFNYYLVIFSLYGGVLISLV 261
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 262 CLRQVDLKMLIAYSSVSHMSLVISGLFTM---NIYSFYGSIFMMVGHGLcSSGLFCLS--NISYDrLGSRLFFLNKGLLS 336
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAF-AKSLFFLVagALSYS-CGTRLLPRLRGVLK 367
|
250
....*....|.
gi 1893869113 337 YMPSMSMWWFL 347
Cdd:PRK06525 368 KLPLVGVGFCV 378
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-368 |
1.36e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.04 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 66 WICSLVLLVSSSVYMSSYFSAMFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFY 145
Cdd:PRK06589 96 WICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKIL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 146 TILASLPLLSCILWMYIYLGGLCYFLLFDLCNSFYFYLSMILAF-LVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKL 224
Cdd:PRK06589 176 MISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKT 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 225 GGYGLIRVFKCILFYS-----LSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSI 299
Cdd:PRK06589 256 GLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAI 335
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869113 300 FMMVGHGLCSSGLFCLSNISYDRLGSRLFFLNKGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLF 368
Cdd:PRK06589 336 LHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLIL 404
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-341 |
1.31e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.79 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLLSCILWM----YI 162
Cdd:PRK06277 101 LYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLastgTL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 163 YLGGLCYFLLFDLCNS-FYFYLSMI---LAFLVKLPmyMFHLWLPKAHVEAPISGSMILAGI-LLKLGGYGLIrVFKciL 237
Cdd:PRK06277 181 NITDIHNALLVNPTSPvIYGGLLLLifgLLYGSGLP--PFHTIKSDIYAKAKPFGSALLQTFsKFVLVALMLV-IFK--L 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 238 FYSLS----FNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLF 313
Cdd:PRK06277 256 FGGLSyfpsAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALF 335
|
250 260
....*....|....*....|....*...
gi 1893869113 314 CLSNISYDRLGSRLFFLNKGLLSYMPSM 341
Cdd:PRK06277 336 LGAGIVSYRTKTSNLRKLGGLLPVMPVV 363
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
183-313 |
1.56e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 40.70 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 183 LSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILLKLGGYGLIRVFKCILF-YSLSFNYYLVIFSLYGGVLISLV 261
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFgFSEAWQIFLAIIAFLSMLIGNFG 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1893869113 262 CLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLF 313
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
94-378 |
2.83e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 39.63 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 94 FLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASM-YLIFYTILASLPLLSCILWMYIYLGGLCYFLL 172
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 173 FDLCNSFYF--------YLSMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAgILLKLGgyglirVFKCILFYSLSFN 244
Cdd:MTH00196 81 LVLNSGQSFssvsvpigYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 245 YYLV--IFSLYGGvliSLVCLRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLFCLSnISYDR 322
Cdd:MTH00196 154 ILLIggLFSLFVG---AIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSII-LALNV 229
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869113 323 LGSRLFFLNkGLLSYMPSMSMWWFLLTSSNMSAPPSLNLIGELSLFIGLVSYSYYL 378
Cdd:MTH00196 230 YKNLIIEFS-GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYL 284
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
87-287 |
3.93e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.18 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSLCCAFSSVSLFGFYLFFEFSLIPTLLLILGWGYQPERVSASMYLIFYTILASLPLL-SCILWMYIYLG 165
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFgGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 166 GLCYFLlfdlcNSFYFYLsMILAFLVKLPMYMFHLWLPKAHVEAPISGSMILaGILLKLGGYGLIrvfkcILFYSLSFNY 245
Cdd:MTH00200 85 GISEML-----GPLSETL-ILLALALKLGLAPGHFWVPDVLQGLSLQTGLIL-STWQKLAPFALL-----IQLAPALNSN 152
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1893869113 246 YLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVISGL 287
Cdd:MTH00200 153 ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL 194
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-313 |
4.95e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 39.03 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 185 MILAFLVKLPMYMFHLWLPKAHVEAPISGSMILAGILlKLGGYG-LIRVFKCILF-YSLSFNYYLVIFSLYGGVLISLVC 262
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGgLSEDWQQVLAIIAIASMLVGNLAA 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1893869113 263 LRQVDLKMLIAYSSVSHMSLVISGLFTMNIYSFYGSIFMMVGHGLCSSGLF 313
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
87-304 |
5.46e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.14 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 87 MFMFVILFLLLSlccafssVSLFGFYLFFEFSLIPTLLLILGWgYQPER----VSASMYLifyTILASLPLLSCILWMYI 162
Cdd:PRK12645 118 LFMGAMLGVVLS-------DNLIVLYLFWELTSISSFLLISYW-YEREAsrygAQKSMLI---TVFGGLSMLGGFILLYI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 163 YLGGLCYFLLFD----LCNSFYFYLSMILAFL---VKLPMYMFHLWLPKAhVEAPI-------SGSMILAGILLklggyg 228
Cdd:PRK12645 187 MTGSFSIREMIAnadeIQNSPLFIPAMILILLgafTKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL------ 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869113 229 lIRVFKCILFYSLSFNYYLVIFSLYGGVLISLVCLRQVDLKMLIAYSSVSHMSLVIS-----------GLFTMNIYS--- 294
Cdd:PRK12645 260 -VARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSllgigaaslhyQGDDSKIYAaai 338
|
250 260
....*....|....*....|..
gi 1893869113 295 ------------FYGSIFMMVG 304
Cdd:PRK12645 339 taaifhlinhatFKGSLFMIVG 360
|
|
| |
