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Conserved domains on  [gi|1893869139|gb|QNH68996|]
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NADH dehydrogenase subunit 4L [Teredorus nigropennis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 3.09e-13

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 59.40  E-value: 3.09e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  3 LMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1893869139 83 EGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 3.09e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 59.40  E-value: 3.09e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  3 LMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1893869139 83 EGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 3.09e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 59.40  E-value: 3.09e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  3 LMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1893869139 83 EGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-88 3.09e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 44.07  E-value: 3.09e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  1 MSLMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMI 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLI 81


                 ....*...
gi 1893869139 81 RSEGNDYV 88
Cdd:MTH00149  82 RLHGNDYV 89
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-90 4.09e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 36.27  E-value: 4.09e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  1 MSLMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFL-VIYLIFSVCEGALGLSVLVGM 79
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNGMLaIVLLTFGACEASLGLSLLVLM 80

                         90
                 ....*....|.
gi 1893869139 80 IRSEGNDYVFS 90
Cdd:MTH00013  81 TRSYGNDMLKS 91
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-96 6.69e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 35.72  E-value: 6.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869139  1 MSLMFFFFLFIFYSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMI 80
Cdd:MTH00188   2 FFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLI 81

                         90
                 ....*....|....*.
gi 1893869139 81 RSEGNDYVFSSFVFMC 96
Cdd:MTH00188  82 RSHGSDYVSSLNLIKC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 23-87 4.98e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 33.28  E-value: 4.98e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869139 23 RKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFL--VIYLIFSVCEGALGLSVLVGMIRSEGNDY 87
Cdd:MTH00125  23 RTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDH 89
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 23-88 7.76e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 32.60  E-value: 7.76e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1893869139 23 RKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLV--IYLIFSVCEGALGLSVLVGMIRSEGNDYV 88
Cdd:MTH00107  23 RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMpiILLVFAACEAAVGLALLVMVSNTYGTDYV 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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