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Conserved domains on  [gi|1896069389|gb|QNJ46850|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Poekilocerus pictus]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.23e-90

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 265.49  E-value: 1.23e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSmFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYyNGTTMMFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  81 MMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069389 161 RLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSET 224
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.23e-90

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 265.49  E-value: 1.23e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSmFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYyNGTTMMFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  81 MMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069389 161 RLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSET 224
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 3.35e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 145.04  E-value: 3.35e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   5 LFSTFDPST-SMFNLSINWSSTFLGLMMMPMMFWMMP----SRTQLLWNKMNMNLHKEFKMLIGKKYYNgTTMMFISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSSLSRwlipSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  80 MMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069389 160 VRLAANMIAGHLLLTLLGNTGP-MMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFsLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 1.52e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.00  E-value: 1.52e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  73 MFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNM 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
62-222 2.42e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 95.63  E-value: 2.42e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  62 IGKKYYNGTTMMFISIFIMMMFNNFMGLF---PYIFTSTSHMVMTLSIALPMWLSFMLFGWINN-TNHMLAHLVPQGTPP 137
Cdd:pfam00119  49 IGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 138 MLMSFMVMIETISNMIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLII---GQTMLLMLESAVALIQAYVFS 214
Cdd:pfam00119 129 PLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFT 208


                  ....*...
gi 1896069389 215 ILSTLYSS 222
Cdd:pfam00119 209 MLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 1.63e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 82.81  E-value: 1.63e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  73 MFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFG-WINNTNHMLAHLVPQGTPPMlMSFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069389 152 MIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITmlIIGQTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.23e-90

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 265.49  E-value: 1.23e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSmFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYyNGTTMMFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  81 MMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069389 161 RLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSET 224
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-223 4.52e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 157.50  E-value: 4.52e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSMF--NLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMnMNLHKEFKMLIGKKYYNGTTMMFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMF-STFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  79 IMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069389 159 AVRLAANMIAGHLLLTLLGNTGP---MMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWgllPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 3.35e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 145.04  E-value: 3.35e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   5 LFSTFDPST-SMFNLSINWSSTFLGLMMMPMMFWMMP----SRTQLLWNKMNMNLHKEFKMLIGKKYYNgTTMMFISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSSLSRwlipSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  80 MMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069389 160 VRLAANMIAGHLLLTLLGNTGP-MMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFsLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 1.52e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.00  E-value: 1.52e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  73 MFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNM 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.04e-35

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 125.86  E-value: 1.04e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   3 TNLFSTFDPST-SMFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLhkeFKMLI--GKKYYNGTTMMFISIFI 79
Cdd:MTH00035    5 NSIFGQFSPDTiLFIPLTLLSSVIALSWLFFINPTNWLPSRSQSIWLTFRQEI---LKLIFqnTNPNTAPWAGLLTTVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  80 MMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLA 159
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069389 160 VRLAANMIAGHLLLTLLGNT-GPMMNFNLI-TMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00035  162 LRLAANLTAGHLLIFLLSTAiWELSNSPLIsIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 4.15e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 124.46  E-value: 4.15e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSMFNL----SINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKkYYNGTTMMFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGK-HLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  77 IFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 157 TLAVRLAANMIAGHLLLTLLGNTGPMMNFNLI---TMLIIGQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSIsstILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-225 2.08e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 122.67  E-value: 2.08e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSMFNL--SINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYYnGTTMMFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLG-GFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  79 IMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069389 159 AVRLAANMIAGHLLLTLLGNTGPMMNFNLITM----LIIGQTMLLMLESAVALIQAYVFSILSTLYSSETQ 225
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVVslllVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEHP 230
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 1.11e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 117.74  E-value: 1.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSMFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYYNGTtMMFISIFIM 80
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  81 MMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLAV 160
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069389 161 RLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQT---MLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00179  160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLvlfLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-223 8.09e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 115.74  E-value: 8.09e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  72 MMFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISN 151
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069389 152 MIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLLM---LESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 71-223 1.30e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 114.92  E-value: 1.30e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  71 TMMFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETIS 150
Cdd:MTH00120   70 ALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069389 151 NMIRPGTLAVRLAANMIAGHLLLTLLG----NTGPMMNFNLITMLIIgQTMLLMLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00120  150 LLIRPLALGVRLTANLTAGHLLIQLIStatlNLLPTMPTLSLLTLII-LLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 8.41e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 113.12  E-value: 8.41e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  71 TMMFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETIS 150
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069389 151 NMIRPGTLAVRLAANMIAGHLLLTLLGN-TGPMMNFNLITMLI--IGQTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:MTH00101  149 LFIQPMALAVRLTANITAGHLLIHLIGGaTLALMSISTTTALItfIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 7.20e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 108.13  E-value: 7.20e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389   1 MMTNLFSTFDPSTSMFNLSINWSSTFLGLMMMPMMFWMMPSRTQLLWNKMNMNLHKEFKMLIGKKYYNgTTMMFISIFIM 80
Cdd:MTH00073    1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHK-WALILTSLMVF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  81 MMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIRPGTLAV 160
Cdd:MTH00073   80 LITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069389 161 RLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGQTMLL---MLESAVALIQAYVFSILSTLYSSE 223
Cdd:MTH00073  160 RLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
62-222 2.42e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 95.63  E-value: 2.42e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  62 IGKKYYNGTTMMFISIFIMMMFNNFMGLF---PYIFTSTSHMVMTLSIALPMWLSFMLFGWINN-TNHMLAHLVPQGTPP 137
Cdd:pfam00119  49 IGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 138 MLMSFMVMIETISNMIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLII---GQTMLLMLESAVALIQAYVFS 214
Cdd:pfam00119 129 PLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFT 208


                  ....*...
gi 1896069389 215 ILSTLYSS 222
Cdd:pfam00119 209 MLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 63-224 6.25e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 95.46  E-value: 6.25e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  63 GKKYYNgttmMFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSF 142
Cdd:MTH00175   79 GQKYFP----FILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPF 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 143 MVMIETISNMIRPGTLAVRLAANMIAGHLLLTLLGN------TGPMMNFNLITMLIIgqTMLLMLESAVALIQAYVFSIL 216
Cdd:MTH00175  155 LVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGfafnmlSNGLIILSLFPMLIM--IFITLLEMAVAVIQAYVFCLL 232


                  ....*...
gi 1896069389 217 STLYSSET 224
Cdd:MTH00175  233 TTIYLGDT 240
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 75-224 5.80e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 92.80  E-value: 5.80e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  75 ISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIR 154
Cdd:MTH00172   76 ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISR 155

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069389 155 PGTLAVRLAANMIAGHLLLTLLGNTGPMM-----NFNLITMLIIgqTMLLMLESAVALIQAYVFSILSTLYSSET 224
Cdd:MTH00172  156 AISLGVRLAANLSAGHLLFAILAGFGFNMlcasgFLSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIYLADT 228
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 1.63e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 82.81  E-value: 1.63e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  73 MFISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFG-WINNTNHMLAHLVPQGTPPMlMSFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069389 152 MIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITmlIIGQTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 2.60e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 74.83  E-value: 2.60e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  73 MFISIFIMMMFNNFMGLFP-YIFTSTSHMVMTLSIALPMWLSFMLFG-WINNTNHMLAHLVPQGTPpmlmsFMVMIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 151 NMIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLITMLIIGqTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 75-224 2.80e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 74.98  E-value: 2.80e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  75 ISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETISNMIR 154
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069389 155 PGTLAVRLAANMIAGHLLLTLLGNTG-PMMNFNLITMLIIGQTMLL---MLESAVALIQAYVFSILSTLYSSET 224
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIASFAwKMINTGILIGSFVPFAILIfvtILEMAVAIIQAYVFTLLTIVYLRDT 248
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 1.00e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.14  E-value: 1.00e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  75 ISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALpmwLSFMLFGWINNTNH----MLAHLVpQGTPPMLMSFMVMIETIS 150
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 151 NMIRPGTLAVRLAANMIAGHLLLtllgntgpmmnFNLITMLIIGQTMLL-------------MLESAVALIQAYVFSILS 217
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIVI-----------LSLIFISFILKSYIVavavsvpfaifiyLLELFVAFLQAYIFTMLS 319


                  ...
gi 1896069389 218 TLY 220
Cdd:PRK13419  320 ALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 2.97e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 52.97  E-value: 2.97e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  95 TSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLAHLVPQGTPPMLMSFMVMIETI-SNMIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1896069389 174 T-LLGNTGPMMNFNLITMLIIGQTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:PRK13417  297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 49-223 1.01e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 47.67  E-value: 1.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  49 KMNMNLHKEFKMLIGKKYYNGTTMM----FISIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTn 124
Cdd:MTH00087   26 MLNVLVKKFFGLLIIVFSYSNKLPLssviSFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE- 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 125 hMLAHLVPQGTPPMLMSF-MVMIETISNMIRPGTLAVRLAANMIAGHLLLTLLGNTGPMMNFNLItmliigqtMLLMLES 203
Cdd:MTH00087  105 -KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSI--------LAIMMEC 175

                         170       180
                  ....*....|....*....|
gi 1896069389 204 AVALIQAYVFSILSTLYSSE 223
Cdd:MTH00087  176 FVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 50-217 9.31e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.49  E-value: 9.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  50 MNMNLHKEFKMLIGKKYYNGTTMMFISIFIMMMFNNFMGL-FPYIFTSTSHMVMTLSIALPMWLSFMLFGWINNTNHMLA 128
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 129 HLVPQGTPPMLMSFMVMIETISNMIRPGTLAVRLAANMIAGHLLLTLLGNTGpMMNFNLITMLIIgqtmLLMLESAVALI 208
Cdd:MTH00050   81 SFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLC-FISYWWFLVLFF----LFFYEVFVALV 155

                         170
                  ....*....|
gi 1896069389 209 QAY-VFSILS 217
Cdd:MTH00050  156 HWFiVSSILS 165
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 76-220 5.48e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 37.03  E-value: 5.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389  76 SIFIMMMFNNFMGLFPYIFTSTSHMVMTLSIALPMWLSFMLFGWINN--TNHMLAHLVPQgtpPMLMSFMVmietISNMI 153
Cdd:PRK13420   80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEglREYLKHYLSPS---PFLLPFHL----ISEIT 152

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069389 154 RPGTLAVRLAANMIAghllltllgntgpMMNFNLITMLIIG---QTMLLMLESAVALIQAYVFSILSTLY 220
Cdd:PRK13420  153 RTLALAVRLFGNIMS-------------LELAALLVLLVAGflvPVPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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