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Conserved domains on  [gi|1896069421|gb|QNJ46866|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Prosarthria teretrirostris]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.13e-89

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.64  E-value: 4.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKiMNISINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMI 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  81 MFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069421 161 LSANMIAGHLLLTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSETN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.13e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.64  E-value: 4.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKiMNISINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMI 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  81 MFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069421 161 LSANMIAGHLLLTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSETN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-222 2.45e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.14  E-value: 2.45e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   5 LFSVFDPSTKIM-NISINWMSTMIG----IIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTM 79
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  80 IMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 159
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069421 160 RLSANMIAGHLLLTLLGNSGMT-MSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-221 2.58e-45

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 147.93  E-value: 2.58e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  67 QGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIE 146
Cdd:cd00310     2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069421 147 TISNIIRPGTLAVRLSANMIAGHLLLTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSS 221
Cdd:cd00310    82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-221 7.53e-28

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 104.88  E-value: 7.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  22 WMSTMIGIIVTPWMFWIT----PNRIMMSWNNMTMSIHKEIKMMLSKKSQGM-TLMMISLFTMIMFNNSMGMF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRKTkklvPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKfFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  94 TSTSHLAMTLSMALPIWISFMMFG-WLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069421 173 TL---LGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSS 221
Cdd:pfam00119 165 LLlagLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-219 6.47e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 97.07  E-value: 6.47e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  23 MSTMIGIIVTPWMFWIT------PNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTST 96
Cdd:COG0356     5 MSWLAMLLLLLLFLLATrklklvPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPT 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  97 SHLAMTLSMALPIWISFMMFG-WLKNTNHMFMHLVPQGTPtALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLL 175
Cdd:COG0356    85 ADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL 163

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1896069421 176 gnSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:COG0356   164 --AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.13e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.64  E-value: 4.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKiMNISINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMI 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  81 MFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069421 161 LSANMIAGHLLLTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSETN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-222 2.45e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.14  E-value: 2.45e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   5 LFSVFDPSTKIM-NISINWMSTMIG----IIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTM 79
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  80 IMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 159
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069421 160 RLSANMIAGHLLLTLLGNSGMT-MSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-222 1.22e-45

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 151.34  E-value: 1.22e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKIM--NISINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFT 78
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  79 MIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLA 158
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069421 159 VRLSANMIAGHLLLTLLGNSG---MTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMwglLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-221 2.58e-45

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 147.93  E-value: 2.58e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  67 QGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIE 146
Cdd:cd00310     2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069421 147 TISNIIRPGTLAVRLSANMIAGHLLLTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSS 221
Cdd:cd00310    82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 4.65e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 137.17  E-value: 4.65e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKIMNI----SINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISL 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  77 FTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGT 156
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069421 157 LAVRLSANMIAGHLLLTLLG---NSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGiyaASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-222 5.61e-40

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 136.64  E-value: 5.61e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   3 TNLFSVFDPSTkIMNISINWMSTMIGIIvtpWMFWIT-----PNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLF 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALS---WLFFINptnwlPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  78 TMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTL 157
Cdd:MTH00035   81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069421 158 AVRLSANMIAGHLLLTLLGNSGMTMSYKILW--MMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00035  161 GLRLAANLTAGHLLIFLLSTAIWELSNSPLIsiITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 3.75e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 132.30  E-value: 3.75e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTKIMNI--SINWMSTMIGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFT 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  79 MIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLA 158
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069421 159 VRLSANMIAGHLLLTLLGNSGMT----MSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSET 223
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSslfsSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-219 8.05e-38

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 131.23  E-value: 8.05e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTkIMNISInwmstMIGIIVTPWMFWITP-----NRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMIS 75
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPI-----VTLIIMFPSLLFPTPnrlinNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMS 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  76 LFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPG 155
Cdd:MTH00101   75 LILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPM 154

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069421 156 TLAVRLSANMIAGHLLLTLLGNSG---MTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:MTH00101  155 ALAVRLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-222 4.55e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 126.48  E-value: 4.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDpSTKIMNISINWMSTMIGIIVTPWM--FWITpNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFT 78
Cdd:MTH00120    1 MNLNFFDQFS-SPELLGIPLILLAMLIPALLIPSPknRLLT-NRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  79 MIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLA 158
Cdd:MTH00120   79 LLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069421 159 VRLSANMIAGHLLLTLLGNSGMT---MSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00120  159 VRLTANLTAGHLLIQLISTATLNllpTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 2.88e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 121.98  E-value: 2.88e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDpSTKIMNISINWMSTMIGIIVTP-WMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTM 79
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPsLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  80 IMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 159
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069421 160 RLSANMIAGHLLLTLLGN---SGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00179  160 RLTANITAGHLLMHLISSavfVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 30-222 1.51e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 114.97  E-value: 1.51e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  30 IVTPWMFWITP------NRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTL 103
Cdd:MTH00132   24 LTLPWILFPTPtsrwlnNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNM 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 104 SMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLLGNSG---- 179
Cdd:MTH00132  104 GLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAfvll 183

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1896069421 180 -MTMSYKILWMMILLqtMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00132  184 pLMPTVAILTATLLF--LLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 2.38e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 114.29  E-value: 2.38e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421   1 MMTNLFSVFDPSTkIMNISINWMStmigiIVTPWMFWITP------NRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMI 74
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLA-----MLLPWLLFPTPtnkwlnNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILT 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  75 SLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRP 154
Cdd:MTH00073   75 SLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRP 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069421 155 GTLAVRLSANMIAGHLLLTLLGNSGMTM-----SYKILWMMILLqtMLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00073  155 LALGVRLTANLTAGHLLIQLISTATLVLlplmpTVSILTMIVLF--LLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
22-221 7.53e-28

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 104.88  E-value: 7.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  22 WMSTMIGIIVTPWMFWIT----PNRIMMSWNNMTMSIHKEIKMMLSKKSQGM-TLMMISLFTMIMFNNSMGMF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRKTkklvPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKfFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  94 TSTSHLAMTLSMALPIWISFMMFG-WLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069421 173 TL---LGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLYSS 221
Cdd:pfam00119 165 LLlagLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 38-223 1.19e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 104.74  E-value: 1.19e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  38 ITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFG 117
Cdd:MTH00172   40 LIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 118 WLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLLGNSGMTM---SYKILWMMILLQ 194
Cdd:MTH00172  120 FWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMlcaSGFLSLFPLLIM 199

                         170       180
                  ....*....|....*....|....*....
gi 1896069421 195 TMLLILESAVSIIQAYVFTMLSTLYSSET 223
Cdd:MTH00172  200 VFITLLEIAVAVIQAYVFCLLTTIYLADT 228
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 26-223 5.24e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 103.55  E-value: 5.24e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  26 MIGIIVTPWMF----WITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAM 101
Cdd:MTH00175   35 MVLAVIIFWLLlkgdKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIII 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 102 TLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLLGNSGMT 181
Cdd:MTH00175  115 TFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFN 194

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1896069421 182 MSYKILWMM----ILLQTMLLILESAVSIIQAYVFTMLSTLYSSET 223
Cdd:MTH00175  195 MLSNGLIILslfpMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-219 6.47e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 97.07  E-value: 6.47e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  23 MSTMIGIIVTPWMFWIT------PNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTST 96
Cdd:COG0356     5 MSWLAMLLLLLLFLLATrklklvPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPT 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  97 SHLAMTLSMALPIWISFMMFG-WLKNTNHMFMHLVPQGTPtALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLL 175
Cdd:COG0356    85 ADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL 163

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1896069421 176 gnSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:COG0356   164 --AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-223 3.25e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 88.46  E-value: 3.25e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  38 ITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALPIWISFMMFG 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 118 WLKNTNHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLLG-------NSGMTMSYKILWMM 190
Cdd:MTH00174  139 LITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIAsfawkmiNTGILIGSFVPFAI 218

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1896069421 191 ILLQTmllILESAVSIIQAYVFTMLSTLYSSET 223
Cdd:MTH00174  219 LIFVT---ILEMAVAIIQAYVFTLLTIVYLRDT 248
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 16-219 6.24e-21

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 87.16  E-value: 6.24e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  16 MNISINWMSTMIGIIVTPWMFWIT-------PNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGM 88
Cdd:PRK05815   12 FNFDSLLLSVLLGVLILLLFALVAtrklsgvPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  89 FP-YIFTSTSHLAMTLSMALPIWISFMMFG-WLKNTNHMFMHLVPQGTPtalmsFMVMIETISNIIRPGTLAVRLSANMI 166
Cdd:PRK05815   92 IPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIISEFSRPISLSLRLFGNML 166

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1896069421 167 AGHLLLTLLGNSGMTMSYkILWMMILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:PRK05815  167 AGELILALIALLGGAGLL-LALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-219 1.40e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 71.31  E-value: 1.40e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  73 MISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMALpiwisFMMF-------------GWLKntnhmfmHLVpQGTPTALM 139
Cdd:PRK13419  174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAV-----FTFFitqyaaikahgikGYLA-------HLT-GGTHWSLW 240

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 140 SFMVMIETISNIIRPGTLAVRLSANMIAGHL-LLTLLGNSGMTMSYKI-LWMMILLQTMLLILESAVSIIQAYVFTMLST 217
Cdd:PRK13419  241 IIMIPIEFIGLFTKPFALTVRLFANMTAGHIvILSLIFISFILKSYIVaVAVSVPFAIFIYLLELFVAFLQAYIFTMLSA 320


                  ..
gi 1896069421 218 LY 219
Cdd:PRK13419  321 LF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-219 5.79e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 55.28  E-value: 5.79e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  94 TSTSHLAMTLSMALPIWISFMMFGWLKNTNHMFMHLVPQGTPTALMSFMVMIETI-SNIIRPGTLAVRLSANMIAGH-LL 171
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1896069421 172 LTLLGNSGMTMSYKILWMMILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 76-222 5.72e-07

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 48.05  E-value: 5.72e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  76 LFTMIMFNNSmGMFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNTnhMFMHLVPQGTPTALMSF-MVMIETISNIIRP 154
Cdd:MTH00087   59 FIVLLLFCFG-GLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRP 135

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069421 155 GTLAVRLSANMIAGHLLLTLLgnsgMTMSYKILWMMILlqtmLLILESAVSIIQAYVFTMLSTLYSSE 222
Cdd:MTH00087  136 LALTLRLTVNLMVGHLISSLL----NFLGEKYVWLSIL----AIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 43-192 3.27e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 45.65  E-value: 3.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  43 IMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNnsmgmFPYIFTSTSHLAMTLSMALPIWISFMMFGWLKNT 122
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYR-----LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSL 75

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 123 NHMFMHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLSANMIAGHLLLTLLGNSGMTMSYKILWMMIL 192
Cdd:MTH00050   76 NEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFFL 145
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 27-219 4.22e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 43.19  E-value: 4.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421  27 IGIIVTPWMFWITPNRIMMSWNNMTMSIHKEIKMMLSKKSQGMTLMMISLFTMIMFNNSMGMFPYIFTSTSHLAMTLSMA 106
Cdd:PRK13420   32 LASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALA 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069421 107 LPIWISFMMFGWLKN--TNHMFMHLVPQgtptalmSFMVMIETISNIIRPGTLAVRLSANM----IAGHLLLTLLGnsgm 180
Cdd:PRK13420  112 LLVFFSVHWFGIRAEglREYLKHYLSPS-------PFLLPFHLISEITRTLALAVRLFGNImsleLAALLVLLVAG---- 180

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1896069421 181 tmsykilwmmILLQTMLLILESAVSIIQAYVFTMLSTLY 219
Cdd:PRK13420  181 ----------FLVPVPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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