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Conserved domains on  [gi|1896069841|gb|QNJ47076|]
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cytochrome b, partial (mitochondrion) [Tetrix subulata]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 663.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  12 IKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  92 FICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 172 DNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMISLMYPYTL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQILFWIMTT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069841 332 TVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLIN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 663.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  12 IKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  92 FICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 172 DNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMISLMYPYTL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQILFWIMTT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069841 332 TVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLIN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
12-365 2.16e-118

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 348.70  E-value: 2.16e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  12 IKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMF 91
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  92 FICIYLHVGRGLYYSSYmlKE----TWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWG 167
Cdd:COG1290   100 FAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 168 GFAVDNPTLSRFFSLH-FILPFMITAMTMIHLTFLHQTGSNNPLG----MNSNLEKIPFHPFFSIKDSITMLMLLMTLMM 242
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 243 ISLMYPytLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:COG1290   258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPveEPYITAGQMLTIMYFSYFLI 365
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 3.14e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.01  E-value: 3.14e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  10 PLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  90 MFFICIYLHVGRGLYYSSYM--LKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1896069841 168 GFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.89e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.61  E-value: 1.89e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  19 LMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  99 VGRGLYYS--SYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1896069841 177 SRFFSLHFILPFMITAMTMIHLTFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-336 7.46e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 57.11  E-value: 7.46e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069841 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFY-NKSKFQGNQFYPMNQILFWIMTTTVILL 336
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVFLFGTVVALWL 143
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 663.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  12 IKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  92 FICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 172 DNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMISLMYPYTL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQILFWIMTT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069841 332 TVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLIN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 616.92  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLINTWINKMWDKMI 377
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
CYTB MTH00119
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 613.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
CYTB MTH00191
cytochrome b; Provisional
 5-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 606.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   5 LRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  85 MNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 165 IWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMIS 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 245 LMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQI 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069841 325 LFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLINTWI 369
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00131
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 596.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   5 LRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  85 MNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 165 IWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMIS 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 245 LMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQI 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1896069841 325 LFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
CYTB MTH00074
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 592.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI-----NTWINKM 372
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIiipltGWLENKL 377
CYTB MTH00100
cytochrome b; Provisional
 4-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 592.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   4 PLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTL 83
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  84 HMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQ 163
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 164 WIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMI 243
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 244 SLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQ 323
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1896069841 324 ILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 588.96  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLINTWINKMWDKMIS 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00034
cytochrome b; Validated
 4-365 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 570.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   4 PLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  84 HMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 164 WIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMI 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 244 SLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1896069841 324 ILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
CYTB MTH00224
cytochrome b; Provisional
 1-377 1.02e-180

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 506.38  E-value: 1.02e-180
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLINTWINKMWDKMI 377
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
CYTB MTH00022
cytochrome b; Validated
 4-365 4.04e-178

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 500.00  E-value: 4.04e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   4 PLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTL 83
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  84 HMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQ 163
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 164 WIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMI 243
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 244 SLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQ 323
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1896069841 324 ILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00053
cytochrome b; Provisional
 1-365 1.92e-176

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 495.77  E-value: 1.92e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841   1 MKKPLRKKHPLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLM 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  81 RTLHMNGASMFFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTL 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 241 MMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPVEEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
CYTB MTH00033
cytochrome b; Provisional
 17-365 5.86e-131

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 380.44  E-value: 5.86e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  17 NSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFICIY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  97 LHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNPTL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 177 SRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKD--SITMLMLLMTLMMISLMYPYTLGDP 254
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDilGFLILFGVFVIIGIEPRIETLLQDP 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 255 DNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQILFWIMTTTVI 334
Cdd:MTH00033  253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1896069841 335 LLTWVGKQPV-EEPYITAGQMLTIMYFSYFLI 365
Cdd:MTH00033  333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00086
cytochrome b; Provisional
 15-371 4.38e-125

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 364.26  E-value: 4.38e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  15 VNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFIC 94
Cdd:MTH00086    3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  95 IYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNP 174
Cdd:MTH00086   83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 175 TLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDsITMLMLLMTLMMISLMYPYTLGDP 254
Cdd:MTH00086  163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDP 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 255 DNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNkskFQGNQFYPMNQILFWIMTTTVI 334
Cdd:MTH00086  242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVVNV 318

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1896069841 335 LLTWVGKQPVEEPYITAGQMLTIMYFSYFLINTWINK 371
Cdd:MTH00086  319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLMLFLFY 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
12-365 2.16e-118

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 348.70  E-value: 2.16e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  12 IKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMF 91
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  92 FICIYLHVGRGLYYSSYmlKE----TWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWG 167
Cdd:COG1290   100 FAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 168 GFAVDNPTLSRFFSLH-FILPFMITAMTMIHLTFLHQTGSNNPLG----MNSNLEKIPFHPFFSIKDSITMLMLLMTLMM 242
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 243 ISLMYPytLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSISITMIMPFYNKSKFQGNQFYP 320
Cdd:COG1290   258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069841 321 MNQILFWIMTTTVILLTWVGKQPveEPYITAGQMLTIMYFSYFLI 365
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 3.14e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.01  E-value: 3.14e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  10 PLIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  90 MFFICIYLHVGRGLYYSSYM--LKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1896069841 168 GFAVDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 11-358 1.59e-84

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 260.69  E-value: 1.59e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  11 LIKVVNNSLMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASM 90
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  91 FFICIYLHVGRGLYYSSYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFA 170
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 171 VDNPTLSRFFSLHFILPFMITAMTMIHLTFLHQTGSNNPLGMNSNL-EKIPFHPFFSIKDSITMLMLLMTLMMISLMYPY 249
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 250 TLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIaLVMSISITMIMPFYNKSKFqgnqFYPMNQILFWIM 329
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSV----YSVWRQVNFWLI 315

                         330       340
                  ....*....|....*....|....*....
gi 1896069841 330 TTTVILLTWVGKQPVEEPYITAGQMLTIM 358
Cdd:MTH00046  316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.89e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.61  E-value: 1.89e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  19 LMDLPTPMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  99 VGRGLYYS--SYMLKETWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1896069841 177 SRFFSLHFILPFMITAMTMIHLTFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-354 3.92e-45

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 152.03  E-value: 3.92e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 208 NPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMISLMYPYTLGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069841 288 KLGGVIALVMSISITMIMPFYNKSKFQgNQFYPMNQILFWIMTTTVILLTWVGKQPVEEPYITAGQM 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 1.18e-41

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 141.46  E-value: 1.18e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFYNKSKFQGNQFYPMNQILFWIMTTTVILLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1896069841 339 VGKQPVEEPYITAGQMLTIMY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-254 9.63e-39

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 136.22  E-value: 9.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  89 SMFFICIYLHVGRGLYYSSYMLKE--TWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 167 GGFAVDNPTLSRFFSLHF-ILPFMITAMTMIHLTFLHQTGSNNPLGMNSNLEKIPFHPFFSIKDSITMLMLLMTLMMISL 245
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1896069841 246 MYPYTLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 8.41e-37

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 132.91  E-value: 8.41e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  34 FGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFICIYLHVGRGLYYSSYMLKE- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 113 -TWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNPTLSRFFSLH-FILPFMI 190
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 1896069841 191 TAMTMIHLTFLHQTGSNNPL 210
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 1.35e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 116.36  E-value: 1.35e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841  25 PMNISMWWNFGSLLGMCLIIQIITGLFLAMHYTADIDMAFKSVVHICRDVNNGWLMRTLHMNGASMFFICIYLHVGRgLY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VY 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 105 YSSYMLKE---TWTVGVLILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNEIVQWIWGGFAVDNPTLSRFFS 181
Cdd:CHL00070  106 LTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                         170       180       190
                  ....*....|....*....|....*....|
gi 1896069841 182 LH-FILPFMITAMTMIHLTFLHQTGSNNPL 210
Cdd:CHL00070  186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 259-346 4.15e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 57.88  E-value: 4.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFY-NKSKFQGNQFYPMNQILFWIMTTTVILLT 337
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQNPFRRPVATAVFLFGTLVTLWLG 145


                  ....*....
gi 1896069841 338 WVGKQPVEE 346
Cdd:COG5679   146 IGAALPIDK 154
petD CHL00058
cytochrome b6/f complex subunit IV
 248-336 4.79e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 57.70  E-value: 4.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069841 248 PYTLGDPdnfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFY-NKSKFQGNQFYPMNQILF 326
Cdd:CHL00058   59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVATTVF 133

                          90
                  ....*....|
gi 1896069841 327 WIMTTTVILL 336
Cdd:CHL00058  134 LIGTAVALWL 143
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-336 7.46e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 57.11  E-value: 7.46e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069841 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSISITMIMPFY-NKSKFQGNQFYPMNQILFWIMTTTVILL 336
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVFLFGTVVALWL 143
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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