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Conserved domains on  [gi|1896069931|gb|QNJ47121|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Monistria consobrina]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-303 4.44e-134

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 382.19  E-value: 4.44e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSMLF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1896069931 259 YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFF 299
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-303 4.44e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 382.19  E-value: 4.44e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSMLF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1896069931 259 YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFF 299
NADHdh pfam00146
NADH dehydrogenase;
19-302 5.71e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.82  E-value: 5.71e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYM--CSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQG 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 177 FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069931 252 -DFNSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 1.69e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 269.69  E-value: 1.69e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMC--SFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQ- 175
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQa 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 176 GFCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG---- 251
Cdd:COG1005   182 GGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069931 252 ---DFNSML-----FYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL-NFLV 301
Cdd:COG1005   262 fpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-303 4.44e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 382.19  E-value: 4.44e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSMLF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1896069931 259 YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFF 299
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 19-302 6.18e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 338.55  E-value: 6.18e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00225   14 LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSM 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00225   94 FSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYF 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSM-- 256
Cdd:MTH00225  174 WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTIdl 253

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1896069931 257 LFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:MTH00225  254 FLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFM 299
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 19-303 4.87e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 316.04  E-value: 4.87e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00143   14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00143   94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSV 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDF----- 253
Cdd:MTH00143  174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSvlfll 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069931 254 NSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00143  254 GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLF 303
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 19-303 5.64e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 298.36  E-value: 5.64e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00218   15 VLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLP 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00218   95 FSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSMLF 258
Cdd:MTH00218  175 WLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINL 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1896069931 259 YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00218  255 MLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLH 299
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 19-302 3.89e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 288.56  E-value: 3.89e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFS 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDfNSMLF 258
Cdd:MTH00195  175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTIIV 253

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1896069931 259 YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:MTH00195  254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
NADHdh pfam00146
NADH dehydrogenase;
19-302 5.71e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.82  E-value: 5.71e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYM--CSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQG 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 177 FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069931 252 -DFNSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 19-303 1.99e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 282.25  E-value: 1.99e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGS 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGD------ 252
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGspfnei 256

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1896069931 253 --FNSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00040  257 fpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFY 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 19-303 1.71e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 276.89  E-value: 1.71e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSML- 257
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMp 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069931 258 ------FYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00104  253 elyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWH 304
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 19-297 2.72e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 271.77  E-value: 2.72e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLnlpp 257

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1896069931 255 ---SMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL 297
Cdd:MTH00111  258 elfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 19-303 1.15e-89

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 269.95  E-value: 1.15e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFM 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNhlqp 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069931 255 ---SMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00071  258 elsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFH 309
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 1.69e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 269.69  E-value: 1.69e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMC--SFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQ- 175
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQa 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 176 GFCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG---- 251
Cdd:COG1005   182 GGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069931 252 ---DFNSML-----FYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL-NFLV 301
Cdd:COG1005   262 fpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 20-303 5.55e-85

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 257.79  E-value: 5.55e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  20 LISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYLT 99
Cdd:MTH00010   17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 100 YMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFcW 179
Cdd:MTH00010   97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-W 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 180 FVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFG----GDFNS 255
Cdd:MTH00010  176 ILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFISD 255

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1896069931 256 MLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00010  256 LMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMIS 303
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 19-302 9.13e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 257.73  E-value: 9.13e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00054   15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 T--YMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQG 176
Cdd:MTH00054   95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQK 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 177 FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDF--- 253
Cdd:MTH00054  175 NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLvis 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069931 254 -------NSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:MTH00054  255 gptsyfsNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVL 310
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 19-301 1.33e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 257.23  E-value: 1.33e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQGFC 178
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESI 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIptlp 258

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069931 255 ---SMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLV 301
Cdd:MTH00134  259 eltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
19-297 5.15e-81

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 247.80  E-value: 5.15e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TY--MCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQG 176
Cdd:PRK06076  103 PElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQF 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 177 FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:PRK06076  183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwlppf 262

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1896069931 252 DFNSML-----FYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL 297
Cdd:PRK06076  263 PLGGGIpgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-302 2.68e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 246.19  E-value: 2.68e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931   1 MMYDLLMFFLNFFLLVVFILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYIS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  81 PIFSLMIALFLWSVFPYL--TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 159 LIVLIGSLNLIDFFIYQG-FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069931 238 IFMSMIMTLFFFGG--------DFNSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 19-302 1.50e-70

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 221.81  E-value: 1.50e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00029   20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMD 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 --TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQG 176
Cdd:MTH00029  100 qgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQR 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 177 FCWFVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:MTH00029  180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069931 252 ------------------DFNSMLFYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVF 302
Cdd:MTH00029  260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 19-303 1.73e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 201.67  E-value: 1.73e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00090    9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  99 TYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYqgfc 178
Cdd:MTH00090   89 FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSL---- 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 179 WFVVFTFPLFIscfsSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFggDFNSMLF 258
Cdd:MTH00090  165 SLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFSFLML 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1896069931 259 YVKLTLMcfcfIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00090  239 FLIFSLL----IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 19-303 3.51e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 160.09  E-value: 3.51e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLlnkeqslILKSNFYLYYISPIFSLM--IALFLWSVFP 96
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKL-------VVKFKVYGFQSRSWFSLFgvFLLVLLVVFY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  97 YLTYMCSFT-----YSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDF 171
Cdd:MTH00058   87 CFIYGSYYSgsyssLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 172 FiyqGFCWFVVFTFPLFISCFSSC-LAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFG 250
Cdd:MTH00058  167 Y---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1896069931 251 GDFNSMLFYVKLtlmcFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:MTH00058  244 GGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 19-297 1.46e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 120.44  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  19 ILISVAFLTLFERSILGHIHVRKGPNKVGYMGILQPFSDAIKLLNKEQSLILKSNFYLYYISPIFSLMIALFLWSVFP-- 96
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPfg 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  97 YLTYMCSFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQ- 175
Cdd:CHL00032  120 YHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQs 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 176 --GFCWFVVFTFPL-FISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTSIIFMSMIMTLFFFGG- 251
Cdd:CHL00032  200 kyGFWGWNLWRQPIgFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGw 279

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 252 ------DFNSMLF------------------YVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL 297
Cdd:CHL00032  280 nlsipyIFIPELFeinktggvfgttigifitLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
25-303 1.93e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 100.26  E-value: 1.93e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931  25 FLTLFERSILGHIHVRKGPnkvgymGILQPFSDAIKLLNKEqSLILKSNFYLYYISPIFSLMIALFLWSVFPYLTYMC-- 102
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE-TVVPETASWLFRAAPYVALAAMLLAALLVPVLTTGPpl 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 103 SFTYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVLIGSLNLIDFFIYQ---GFCW 179
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQaahGPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069931 180 FVVFTFPLFISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSAGFTLIFLSEYTS-IIFMSMIMTLFFFGGDFNSML- 257
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKlFVLLSLFVNLFLPWGIALTLLl 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069931 258 ----FYVKLTLMCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLVFF 303
Cdd:COG0650   253 alllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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