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Conserved domains on  [gi|1896069969|gb|QNJ47140|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Monistria discrepans]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 1.12e-137

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 1.12e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSILF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 259 YVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 1.12e-137

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 1.12e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSILF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 259 YVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
19-302 2.30e-92

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 276.66  E-value: 2.30e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYM--CSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 252 -DFNSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 6.39e-85

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 258.52  E-value: 6.39e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMC--SFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQA 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 -FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGG---- 251
Cdd:COG1005   182 gGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 252 ----DFNSIL----FYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL-NFLI 301
Cdd:COG1005   262 fpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 1.12e-137

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 1.12e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00193   15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00193   95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSILF 258
Cdd:MTH00193  175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 259 YVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00193  255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 19-308 5.75e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 341.63  E-value: 5.75e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00225   14 LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSM 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00225   94 FSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYF 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN--SI 256
Cdd:MTH00225  174 WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVtiDL 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 257 LFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKI 308
Cdd:MTH00225  254 FLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 19-306 1.53e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 315.27  E-value: 1.53e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00143   14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00143   94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSV 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDF----- 253
Cdd:MTH00143  174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSvlfll 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1896069969 254 NSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSF 306
Cdd:MTH00143  254 GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 19-310 6.92e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 301.06  E-value: 6.92e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00218   15 VLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLP 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00218   95 FSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFNSILF 258
Cdd:MTH00218  175 WLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINL 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 259 YVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00218  255 MLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 19-310 1.97e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 292.42  E-value: 1.97e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFS 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDfNSILF 258
Cdd:MTH00195  175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTIIV 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 259 YVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00195  254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 19-310 1.18e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 285.36  E-value: 1.18e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNpymp 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 255 ---SILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00104  253 elyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 19-311 6.69e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 281.12  E-value: 6.69e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFM 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNhlqp 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 255 ---SILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIMLI 311
Cdd:MTH00071  258 elsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 19-310 4.29e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 279.17  E-value: 4.29e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGS 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGD------ 252
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGspfnei 256

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 253 --FNSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00040  257 fpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
19-302 2.30e-92

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 276.66  E-value: 2.30e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYM--CSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 252 -DFNSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 19-310 5.41e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 276.39  E-value: 5.41e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLnlpp 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 255 ---SILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00111  258 elfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 19-310 1.19e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 268.01  E-value: 1.19e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESI 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDFN---- 254
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIptlp 258

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 255 ---SILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIML 310
Cdd:MTH00134  259 eltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 20-311 5.67e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 265.88  E-value: 5.67e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  20 LISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYLT 99
Cdd:MTH00010   17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 100 YMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFcW 179
Cdd:MTH00010   97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-W 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 180 FVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFG----GDFNS 255
Cdd:MTH00010  176 ILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFISD 255

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069969 256 ILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKIMLI 311
Cdd:MTH00010  256 LMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 6.39e-85

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 258.52  E-value: 6.39e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMC--SFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQA 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 -FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGG---- 251
Cdd:COG1005   182 gGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 252 ----DFNSIL----FYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL-NFLI 301
Cdd:COG1005   262 fpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 19-302 9.44e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 255.42  E-value: 9.44e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00054   15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 T--YMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:MTH00054   95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQK 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGDF--- 253
Cdd:MTH00054  175 NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLvis 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069969 254 -------NSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIF 302
Cdd:MTH00054  255 gptsyfsNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVL 310
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
19-297 2.55e-79

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 243.95  E-value: 2.55e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 -TYMCSFL-YSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:PRK06076  103 pELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQF 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGdFNS- 255
Cdd:PRK06076  183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGG-WLPp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1896069969 256 ----------ILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSL 297
Cdd:PRK06076  262 fplgggipgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-305 3.65e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 243.87  E-value: 3.65e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969   1 MMYDLLMFFFNFLLLVVFILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYIS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  81 PIFSLMIALFLWSVFPYL--TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 159 LIILIGSLNLIDFFIYQS-FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069969 238 IFMSMIMTLFFFGGDFNSIL--------FYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCS 305
Cdd:MTH00216  241 ILMSCLTTILFLGGWLSPIKyfkggagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVAS 316
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 19-302 1.13e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 217.58  E-value: 1.13e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00029   20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMD 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 --TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:MTH00029  100 qgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQR 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTLPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGG----- 251
Cdd:MTH00029  180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069969 252 ------------------DFNSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIF 302
Cdd:MTH00029  260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 19-308 4.55e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 198.58  E-value: 4.55e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFPYL 98
Cdd:MTH00090    9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  99 TYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFC 178
Cdd:MTH00090   89 FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSLSLFV 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 179 WFVVFtlplgiscFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFggDFNSILF 258
Cdd:MTH00090  169 IYLPF--------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFSFLML 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069969 259 YVKLSLLcfcfIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFKI 308
Cdd:MTH00090  239 FLIFSLL----IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 19-303 1.35e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.93  E-value: 1.35e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLnkeqsllLKSNFYLYYISPIFSLM--IALFLWSVFP 96
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLV-------VKFKVYGFQSRSWFSLFgvFLLVLLVVFY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  97 YLTYMCSFL-----YSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDF 171
Cdd:MTH00058   87 CFIYGSYYSgsyssLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 172 FiyqSFCWFVVFTLPLGISCFSSC-LAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFG 250
Cdd:MTH00058  167 Y---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1896069969 251 GDFNSILFYVKLsllcFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFF 303
Cdd:MTH00058  244 GGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 19-311 4.13e-30

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 116.97  E-value: 4.13e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  19 ILISVAFLTLFERKVLGYIHIRKGPNKVGYTGILQPFSDAIKLLNKEQSLLLKSNFYLYYISPIFSLMIALFLWSVFP-- 96
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPfg 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  97 YLTYMCSFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQS 176
Cdd:CHL00032  120 YHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQS 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 177 FCWFVVFTL---PLG-ISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTSIIFMSMIMTLFFFGGD 252
Cdd:CHL00032  200 KYGFWGWNLwrqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGW 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 253 FNSILFY-------------------------VKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFFCSFK 307
Cdd:CHL00032  280 NLSIPYIfipelfeinktggvfgttigifitlAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQ 359


                  ....
gi 1896069969 308 IMLI 311
Cdd:CHL00032  360 LLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
25-303 2.22e-22

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 94.86  E-value: 2.22e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969  25 FLTLFERKVLGYIHIRKGPnkvgytGILQPFSDAIKLLNKEqSLLLKSNFYLYYISPIFSLMIALFLWSVFPYLTYMC-- 102
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE-TVVPETASWLFRAAPYVALAAMLLAALLVPVLTTGPpl 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 103 SFLYSFLFFLCCSSLGVYSMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSLNLIDFFIYQSFCWFVV 182
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069969 183 FT---LPLGISCFSSCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTS-IIFMSMIMTLFFFGG-----DF 253
Cdd:COG0650   173 LSpslLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKlFVLLSLFVNLFLPWGialtlLL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069969 254 NSILFYVKLSLLCFCFIWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLIFF 303
Cdd:COG0650   253 ALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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