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Conserved domains on  [gi|1896069971|gb|QNJ47141|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Dictyophorus griseus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-304 3.16e-141

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 400.68  E-value: 3.16e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 241 FFFGGDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLL 304
Cdd:MTH00193  243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-304 3.16e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 400.68  E-value: 3.16e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 241 FFFGGDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLL 304
Cdd:MTH00193  243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
7-297 2.12e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.68  E-value: 2.12e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   7 LLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVW 86
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  87 SVFPFLTYM--CSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFD 164
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 165 FMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFFG 244
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069971 245 G------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFY 297
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-291 1.04e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 278.17  E-value: 1.04e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVG 158
Cdd:COG1005    90 PALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 159 SFNFFDFMDYQS-YCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMI 237
Cdd:COG1005   170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069971 238 IILFFFGG--------DFYSLL----FYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSL 291
Cdd:COG1005   250 ATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-304 3.16e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 400.68  E-value: 3.16e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 241 FFFGGDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLL 304
Cdd:MTH00193  243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-301 3.85e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 347.02  E-value: 3.85e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069971 241 FFFGGDFY--SLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLS 301
Cdd:MTH00225  242 LFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 3-301 1.48e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 315.27  E-value: 1.48e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   3 FLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMIS 82
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  83 LFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNF 162
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 163 FDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFF 242
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 243 FGGDF-----YSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLS 301
Cdd:MTH00143  244 FGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-305 6.49e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 301.06  E-value: 6.49e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   3 FLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMIS 82
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  83 LFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNF 162
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 163 FDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFF 242
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069971 243 FGGDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLLT 305
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFA 307
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-307 1.06e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 300.77  E-value: 1.06e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00071    6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00071   86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00071  166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTI 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 241 FFFGGDFY-------SLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLLTLI 307
Cdd:MTH00071  246 LFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-307 1.44e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 300.39  E-value: 1.44e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 241 FFFGG-------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLLTLI 307
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 4-302 4.75e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 296.81  E-value: 4.75e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   4 LNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISL 83
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  84 FVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFF 163
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 164 DFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFF 243
Cdd:MTH00111  169 TLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069971 244 -------GGDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSV 302
Cdd:MTH00111  249 npstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-304 2.07e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 287.26  E-value: 2.07e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896069971 241 FFFGGD--------FYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLL 304
Cdd:MTH00040  245 LFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
7-297 2.12e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.68  E-value: 2.12e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   7 LLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVW 86
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  87 SVFPFLTYM--CSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFD 164
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 165 FMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFFG 244
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069971 245 G------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFY 297
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-305 1.01e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 285.73  E-value: 1.01e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00134    7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSF 160
Cdd:MTH00134   87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 161 NFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIIL 240
Cdd:MTH00134  167 TLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAI 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896069971 241 FFFGGDFYSLLFYL-------KLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLLT 305
Cdd:MTH00134  247 LFLGASHIPTLPELttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFA 318
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-304 3.70e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 283.56  E-value: 3.70e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   6 FLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFV 85
Cdd:MTH00195    8 FLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALIL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  86 WSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDF 165
Cdd:MTH00195   88 WVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIM 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 166 MDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFFGG 245
Cdd:MTH00195  168 VISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069971 246 DfYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLL 304
Cdd:MTH00195  248 G-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-291 1.04e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 278.17  E-value: 1.04e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVG 158
Cdd:COG1005    90 PALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 159 SFNFFDFMDYQS-YCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMI 237
Cdd:COG1005   170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069971 238 IILFFFGG--------DFYSLL----FYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSL 291
Cdd:COG1005   250 ATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-305 1.33e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 269.73  E-value: 1.33e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   2 FFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMI 81
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  82 SLFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFN 161
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 162 FFDFMdYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILF 241
Cdd:MTH00010  165 FSKII-MSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069971 242 FFG----GDFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSVLLT 305
Cdd:MTH00010  244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-291 9.11e-87

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 262.82  E-value: 9.11e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFL-TYMCSFI-YSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVG 158
Cdd:PRK06076   91 PAFLAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 159 SFNFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMII 238
Cdd:PRK06076  171 SLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALI 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069971 239 ILFFFGG----------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSL 291
Cdd:PRK06076  251 TTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-300 3.50e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 251.19  E-value: 3.50e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:MTH00054    3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLT--YMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVG 158
Cdd:MTH00054   83 LAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 159 SFNFFDFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMII 238
Cdd:MTH00054  163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896069971 239 ILFFFGGDFY----------SLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSL 300
Cdd:MTH00054  243 VILFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-300 8.77e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 247.73  E-value: 8.77e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   2 FFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMI 81
Cdd:MTH00216    8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  82 SLFVWSVFPFL--TYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGS 159
Cdd:MTH00216   88 ALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGS 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 160 FNFFDFMDYQS-YCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMII 238
Cdd:MTH00216  168 LSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLT 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 239 ILFFFGG--------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSL 300
Cdd:MTH00216  248 TILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 8-296 1.20e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 214.50  E-value: 1.20e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   8 LLVIFV--LVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFV 85
Cdd:MTH00029   13 LLIIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  86 WSVFPFL--TYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFF 163
Cdd:MTH00029   93 WAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 164 DFMDYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFF 243
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069971 244 GG-----------------------DFYSLLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIF 296
Cdd:MTH00029  253 GGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-302 5.70e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 190.50  E-value: 5.70e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   5 NFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLF 84
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  85 VWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFD 164
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 165 FmdyqsycwFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFFFg 244
Cdd:MTH00090  161 S--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069971 245 gDFYSLLFYLKLSMMSFIfiwvRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFYCSLSV 302
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIFI----RSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 3-296 3.69e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 155.08  E-value: 3.69e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   3 FLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMIS 82
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  83 LFVWSVFPFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNF 162
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 163 FDFmdYQSYCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMSMIIILFF 242
Cdd:MTH00058  164 VDF--YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069971 243 FGGDFYSLLFYLKLsmmsFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIF 296
Cdd:MTH00058  242 FGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-304 2.04e-34

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 128.53  E-value: 2.04e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   3 FLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMIS 82
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  83 LFVWSVFPFLTYmcsFIYSFL-----FFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILV 157
Cdd:CHL00032  110 LLSYLVIPFGYH---LVLADLsigvfLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLS 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 158 GSFNFFDFMDYQSY-------CWFVFISFplmISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTM 230
Cdd:CHL00032  187 NSLSTVDIVEAQSKygfwgwnLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLN 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 231 IIFMSMIIILFFFGGDFYSLLFYLKLSMMS-------------------------FIFIWVRGTLPRFRYDKLMHLAWKS 285
Cdd:CHL00032  264 LLVSSLFVTVLYLGGWNLSIPYIFIPELFEinktggvfgttigifitlaktylflFISITTRWTLPRLRMDQLLNLGWKF 343

                         330
                  ....*....|....*....
gi 1896069971 286 FLPLSLNFLIFYCSLSVLL 304
Cdd:CHL00032  344 LLPISLGNLLLTTSFQLLS 362
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-297 1.88e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 111.04  E-value: 1.88e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971   1 MFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPnkvgfmGILQPFSDAIKLLmSEQPVLIKSNYLLYYLSPIFSLM 80
Cdd:COG0650     2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLL-RKETVVPETASWLFRAAPYVALA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971  81 ISLFVWSVFPFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILFSLIILVG 158
Cdd:COG0650    75 AMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069971 159 SFNFFDFMDYQS---YCWFVFISFPLMISFFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLSEYTMIIFMS 235
Cdd:COG0650   155 STSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069971 236 MIIILFFFGGDFYS------LLFYLKLSMMSFIFIWVRGTLPRFRYDKLMHLAWKSFLPLSLNFLIFY 297
Cdd:COG0650   235 SLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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