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Conserved domains on  [gi|1896069983|gb|QNJ47147|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Phymateus viridipes]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.41e-135

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 386.43  E-value: 1.41e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 245 SLTFLGGDYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.41e-135

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 386.43  E-value: 1.41e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 245 SLTFLGGDYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.15e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.67  E-value: 2.15e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  13 LMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMISLVVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  93 SVFPYLTYM--CSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLSV 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 171 FMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSLTFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 251 G------DYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-297 2.13e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.38  E-value: 2.13e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   2 LIDLLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSP 81
Cdd:COG1005     5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  82 IFSLMISLVVWSVFPYLTYMC--SFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:COG1005    85 ILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 160 IILVGSFNLSVFMDYQY-YCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIV 238
Cdd:COG1005   165 VLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069983 239 FVSMFMSLTFLGGDYYSFI------------FYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:COG1005   245 LVSALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.41e-135

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 386.43  E-value: 1.41e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 245 SLTFLGGDYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-308 2.24e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 340.09  E-value: 2.24e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   6 LMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  86 MISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 166 FNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMS 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069983 246 LTFLGGDYY--SFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKI 308
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 5.23e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 316.43  E-value: 5.23e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   6 LMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  86 MISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 166 FNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMS 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 246 LTFLGGD-----YYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGL 306
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-310 1.96e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 294.99  E-value: 1.96e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   7 MFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  87 ISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 167 NLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069983 247 TFLGGDY-------YSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00104  241 LFLGAFHnpympelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-310 7.28e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 293.35  E-value: 7.28e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 245 SLTFLGGDYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 3.88e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 288.95  E-value: 3.88e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 245 SLTFLGGDyYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 3.19e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 287.29  E-value: 3.19e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069983 245 SLTFLGGDYY-------SFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMFMI 312
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-310 4.23e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 286.79  E-value: 4.23e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 165 SFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896069983 245 SLTFLGGDY-------YSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00111  244 TILFLNPSTlnlppelFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISL 316
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-313 1.91e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 282.63  E-value: 1.91e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   4 DLLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIF 83
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  84 SLMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 163
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 164 GSFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMF 243
Cdd:MTH00040  162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 244 MSLTFLGGDYY--------SFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMFMIF 313
Cdd:MTH00040  242 SVILFLGGGSPfneifpinIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.15e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.67  E-value: 2.15e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  13 LMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMISLVVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  93 SVFPYLTYM--CSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLSV 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 171 FMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSLTFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 251 G------DYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 6.17e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 281.49  E-value: 6.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   1 MLIDLLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  81 PIFSLMISLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 161 ILVGSFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFV 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069983 241 SMFMSLTFLGGDYY-------SFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-297 2.13e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.38  E-value: 2.13e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   2 LIDLLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSP 81
Cdd:COG1005     5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  82 IFSLMISLVVWSVFPYLTYMC--SFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:COG1005    85 ILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 160 IILVGSFNLSVFMDYQY-YCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIV 238
Cdd:COG1005   165 VLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069983 239 FVSMFMSLTFLGGDYYSFI------------FYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:COG1005   245 LVSALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-310 3.12e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 261.59  E-value: 3.12e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLT--YMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 163 VGSFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 243 FMSLTFLGGDYYSFI----------FYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIMF 310
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-312 7.36e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 260.48  E-value: 7.36e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   8 FVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  88 SLVVWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 168 LSVFMDYQYYcWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSLT 247
Cdd:MTH00010  165 FSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069983 248 FLGGDYYSFI----FYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFcgLKIMFMI 312
Cdd:MTH00010  244 FTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMIS--IPIMFLL 310
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.55e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 254.73  E-value: 1.55e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   5 LLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFS 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  85 LMISLVVWSVFPYLTY--MCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 163 VGSFNLSVFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069983 243 FMSLTFLGGdYYSFI-----------FYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGG-WLPPFplgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-310 1.00e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 252.73  E-value: 1.00e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   1 MLIDLLMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  81 PIFSLMISLVVWSVFPYL--TYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 159 LIILVGSFNLSVFMDYQY-YCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 238 VFVSMFMSLTFLGG--------DYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKIM 309
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  .
gi 1896069983 310 F 310
Cdd:MTH00216  321 F 321
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 14-310 3.79e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.04  E-value: 3.79e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  14 MLIIFV--LISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMISLVV 91
Cdd:MTH00029   13 LLIIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  92 WSVFPYL--TYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLS 169
Cdd:MTH00029   93 WAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 170 VFMDYQYYCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSLTFL 249
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 250 GG-----------------------DYYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGL 306
Cdd:MTH00029  253 GGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332


                  ....
gi 1896069983 307 KIMF 310
Cdd:MTH00029  333 LIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 3.57e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 183.18  E-value: 3.57e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  11 NFLMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMISLV 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  91 VWSVFPYLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLSV 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 171 FMDYQYYcwFMFLCFPLMIscfasfLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFMSLTFLG 250
Cdd:MTH00090  161 SFSLSLF--VIYLPFLIMI------IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 251 gdyYSFIFyvkLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFCGLKI 308
Cdd:MTH00090  233 ---FSFLM---LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-303 2.36e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 155.47  E-value: 2.36e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   6 LMFVLNFLMLIIFVLIsVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIfsL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--L 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  86 MISLVVWSVFPYLTYMCSFTYGF--LFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 163
Cdd:MTH00058   79 LVLLVVFYCFIYGSYYSGSYSSLslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCY 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 164 GSFNLsvfMDYQYYCWFMFLCFPLMISCF-ASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSM 242
Cdd:MTH00058  159 GSYSL---VDFYYSGWLSVLLFPLIYILWlVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069983 243 FMSLTFLGGDYYSFIfyvkLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFF 303
Cdd:MTH00058  236 LGSVLFFGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 13-297 5.67e-28

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 111.20  E-value: 5.67e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  13 LMLIIFVLISVAFLILFERKLLGYIHIRKGPNSVGFIGILQPFSDALKLLTSEHSIPLVSNYFLYYFSPIFSLMISLVVW 92
Cdd:CHL00032   34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  93 SVFP--YLTYMCSFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLSV 170
Cdd:CHL00032  114 LVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVD 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 171 FMDYQyyCWFMFLCFPL------MISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFVSMFM 244
Cdd:CHL00032  194 IVEAQ--SKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFV 271

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069983 245 SLTFLGGDYYS-------------------------FIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:CHL00032  272 TVLYLGGWNLSipyifipelfeinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-303 5.29e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 99.10  E-value: 5.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983   6 LMFVLNFLMLIIFVLISVAFLILFERKLLGYIHIRKGPnsvgfiGILQPFSDALKLLTSEHSIPLVSNyFLYYFSPIFSL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983  86 MISLVVWSVFPYLTYMC--SFTYGFLFFLCCTSLSVYTIMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069983 164 GSFNLSVFMDYQY---YCWFMFLCFPLMISCFASFLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYASIVFV 240
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896069983 241 SMFMSLTFLGGD------YYSFIFYVKLSFISFCFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFF 303
Cdd:COG0650   234 LSLFVNLFLPWGialtllLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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