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Conserved domains on  [gi|1896070101|gb|QNJ47206|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Tetrix subulata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 1.37e-30

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 105.24  E-value: 1.37e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   4 ILMSTMIISITLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMK 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1896070101  84 MSSMKFWWISTSTFIIILLMGIFYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 1.37e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 105.24  E-value: 1.37e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   4 ILMSTMIISITLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMK 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1896070101  84 MSSMKFWWISTSTFIIILLMGIFYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
33-115 4.41e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.41e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQG 112
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1896070101 113 MLK 115
Cdd:pfam00507  92 ALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 33-116 4.63e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.62  E-value: 4.63e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQG 112
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FGLIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1896070101 113 MLKW 116
Cdd:COG0838   114 ALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 1.37e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 105.24  E-value: 1.37e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   4 ILMSTMIISITLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMK 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1896070101  84 MSSMKFWWISTSTFIIILLMGIFYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 2.04e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 102.24  E-value: 2.04e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   1 MISILMSTMIISItLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVP 80
Cdd:MTH00148    1 MLSILLSLLFALI-LSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1896070101  81 VMKMSSMKFWWISTSTFIIILLMGIFYEWNQGMLKWA 117
Cdd:MTH00148   80 SLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 5-118 3.86e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 101.61  E-value: 3.86e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   5 LMSTMIISITLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKM 84
Cdd:MTH00202    4 ILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKS 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1896070101  85 SSMKFWWISTSTFIIILLMGIFYEWNQGMLKWAI 118
Cdd:MTH00202   84 SWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 7.89e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 93.06  E-value: 7.89e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   1 MISILMST--MIISITLPiimmlismmiskKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPM 78
Cdd:MTH00136    9 TITIALSLilAIVSFWLP------------QMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPL 76

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1896070101  79 VPVMKMSSMKFWWISTSTFIIILLMGIFYEWNQGMLKWA 117
Cdd:MTH00136   77 PWGDQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 1.40e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 90.04  E-value: 1.40e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  32 SDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWISTSTFIIILLMGIFYEWNQ 111
Cdd:MTH00042   30 PDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVN 109


                  ....*.
gi 1896070101 112 GMLKWA 117
Cdd:MTH00042  110 GGLEWA 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 2-117 1.77e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 89.92  E-value: 1.77e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   2 ISILMSTMIISITLPIIMMLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPV 81
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1896070101  82 MKMSSMKFWWISTSTFIIILLMGIFYEWNQGMLKWA 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
33-115 4.41e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.41e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQG 112
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1896070101 113 MLK 115
Cdd:pfam00507  92 ALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 29-116 5.19e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 88.42  E-value: 5.19e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  29 KMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWIstSTFIIILLMGIFYE 108
Cdd:MTH00203   27 KVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLLA--FLFLILLTLGLIYE 104


                  ....*...
gi 1896070101 109 WNQGMLKW 116
Cdd:MTH00203  105 WLQGGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-117 4.20e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 86.09  E-value: 4.20e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   1 MISILMSTMIISITLpiimmLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVP 80
Cdd:MTH00113    3 LISMLTISLALSTIL-----TTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPW 77

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1896070101  81 VMKMSSMKFWWISTSTFIIILLMGIFYEWNQGMLKWA 117
Cdd:MTH00113   78 AINLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-117 4.88e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 85.82  E-value: 4.88e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101   1 MISILMSTMIISITLpiimmLISMMISKKMISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVP 80
Cdd:MTH00069    2 IMLMLLISTILSLIL-----ITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPW 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1896070101  81 VMKMSS---MKFWwistSTFIIILL-MGIFYEWNQGMLKWA 117
Cdd:MTH00069   77 ASQLNTptnTLFW----STLILILLtLGLIYEWIQGGLEWA 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 35-117 9.67e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 85.38  E-value: 9.67e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  35 EKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWISTSTFIIILLMGIFYEWNQGML 114
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 1896070101 115 KWA 117
Cdd:MTH00106  112 EWT 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 33-117 4.26e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 4.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILP-MVPVMKMSSMKFWwiSTSTFIIILLMGIFYEWNQ 111
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWLGFV--EAMIFILVLLVGLVYLWRK 115


                  ....*.
gi 1896070101 112 GMLKWA 117
Cdd:PRK06602  116 GALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 33-116 4.63e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.62  E-value: 4.63e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQG 112
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FGLIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1896070101 113 MLKW 116
Cdd:COG0838   114 ALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 33-116 6.66e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 67.78  E-value: 6.66e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWIsTSTFIIILLMGIFYEWNQG 112
Cdd:MTH00018   30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWT-MVGFLFILTLGLIYEWIKG 108


                  ....
gi 1896070101 113 MLKW 116
Cdd:MTH00018  109 GLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 33-116 9.21e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 67.43  E-value: 9.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWIsTSTFIIILLMGIFYEWNQG 112
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWV-MYLFLIILTIGLIYEWVKG 113


                  ....
gi 1896070101 113 MLKW 116
Cdd:MTH00055  114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 33-116 3.21e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.49  E-value: 3.21e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMKFWWIsTSTFIIILLMGIFYEWNQG 112
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWI-VYTFLIVLAIGLAYEWIKG 118


                  ....
gi 1896070101 113 MLKW 116
Cdd:MTH00030  119 GLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
33-116 2.09e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.59  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQG 112
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-FALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1896070101 113 MLKW 116
Cdd:PRK07756  118 VLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
36-116 8.22e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 47.35  E-value: 8.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  36 KSSPFECGFNPKTHARlPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQGMLK 115
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGL-FGLIEMLLFIVLLTIGFIYAWKKGALE 124


                  .
gi 1896070101 116 W 116
Cdd:PRK08489  125 W 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-116 1.09e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.59  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  33 DREKSSPFECGFNPKTHARLP--FSIQFFLISMLFLIFDIEIALILPMVpVMKMSSMKFWWISTSTFIIILLMGIFYEWN 110
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWA-VSFDALGVFGLVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1896070101 111 QGMLKW 116
Cdd:PRK07928  113 RGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 35-116 7.29e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 44.59  E-value: 7.29e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  35 EKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMVPVMKMSSMkFWWISTSTFIIILLMGIFYEWNQGML 114
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-SAFIEALIFVLILIVGLVYAWRKGAL 117


                  ..
gi 1896070101 115 KW 116
Cdd:CHL00022  118 EW 119
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-116 3.09e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 40.57  E-value: 3.09e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  32 SDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILP-MVPVMKMSSMKFwwISTSTFIIILLMGIFYEWN 110
Cdd:PRK06432   59 SDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPwAFDFKRLGLIPF--IETLIFLAMPLFAVYYAFK 136


                  ....*.
gi 1896070101 111 QGMLKW 116
Cdd:PRK06432  137 MGYMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 31-116 2.54e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070101  31 ISDREKSSPFECGFNPKTHARLPFSIQFFLISMLFLIFDIEIALILPMvPVMKMSSMKFWWIstSTFIIILLMGIFYEWN 110
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNM-PFQGLLFYNFWYY--YFFLLLLFLGFVVELF 108


                  ....*.
gi 1896070101 111 QGMLKW 116
Cdd:MTH00060  109 SGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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