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Conserved domains on  [gi|1896070111|gb|QNJ47211|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Propsednura eyrei]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06602 super family cl00535
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-73 1.82e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


The actual alignment was detected with superfamily member MTH00202:

Pssm-ID: 469809 [Multi-domain]  Cd Length: 117  Bit Score: 90.44  E-value: 1.82e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIM 73
Cdd:MTH00202    9 ILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81
 
Name Accession Description Interval E-value
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-73 1.82e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 90.44  E-value: 1.82e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIM 73
Cdd:MTH00202    9 ILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
11-68 2.96e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 76.69  E-value: 2.96e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111 11 MFIASMIAKKNNNnREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:pfam00507  1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-68 2.10e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 72.46  E-value: 2.10e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNnREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:COG0838    13 LVALGLALAMLLLSRLLGPKRPN-PEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
 
Name Accession Description Interval E-value
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-73 1.82e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 90.44  E-value: 1.82e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIM 73
Cdd:MTH00202    9 ILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-75 1.18e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 1.18e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIMNS 75
Cdd:MTH00148    9 LFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGS 83
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-75 3.65e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 87.14  E-value: 3.65e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIMNS 75
Cdd:MTH00161    7 LIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 26-68 4.43e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 81.89  E-value: 4.43e-22
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1896070111  26 EKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:MTH00136   33 EKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP 75
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-73 5.04e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 81.83  E-value: 5.04e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIM 73
Cdd:MTH00012    9 MISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTIL 81
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-68 2.50e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 79.92  E-value: 2.50e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNNrEKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:MTH00113    8 TISLALSTILTTLNFWLTQTKPDN-EKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLP 74
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 8-68 2.91e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 79.65  E-value: 2.91e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896070111   8 MMVMFIASMIA----------KKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:MTH00069    3 MLMLLISTILSlilitisfwlPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLP 73
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 26-68 3.73e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 79.60  E-value: 3.73e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1896070111  26 EKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLP 74
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
11-68 2.96e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 76.69  E-value: 2.96e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111 11 MFIASMIAKKNNNnREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:pfam00507  1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-68 2.10e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 72.46  E-value: 2.10e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNnREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:COG0838    13 LVALGLALAMLLLSRLLGPKRPN-PEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-68 3.01e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 71.85  E-value: 3.01e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNN---NREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:MTH00203    5 MLFFLIALLLSLILLFIAFWLPKvnpDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLP 75
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 10-75 3.54e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 71.94  E-value: 3.54e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896070111  10 VMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP---AMIIMNS 75
Cdd:MTH00042   17 LLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPlppATLITNP 85
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-68 3.32e-15

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 64.50  E-value: 3.32e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070111   1 IISLVTPMMVMFIASMIAKKNNNnREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:PRK06602   16 IVAIGLGILLLVAGKLLGPRAPD-REKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFP 82
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 10-74 4.73e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 61.65  E-value: 4.73e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896070111  10 VMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIMN 74
Cdd:MTH00055   21 VISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-75 4.45e-13

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 58.92  E-value: 4.45e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896070111   1 IISLVTPMMVMFiASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIMNS 75
Cdd:MTH00018    8 IFSVVLSALFSG-ASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 24-74 2.47e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 54.55  E-value: 2.47e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1896070111  24 NREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILPAMIIMN 74
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFN 90
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 24-68 6.57e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 43.12  E-value: 6.57e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1896070111  24 NREKSSPFECGFDPKSSARMP--FSIQFFLIAVIFLIFDIEIALILP 68
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP 80
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-68 8.25e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.42  E-value: 8.25e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896070111   1 IISLVTPMMVMFIASMIAKK---NNNNREKSSPFECGFDP-KSSARMpfSIQFFLIAVIFLIFDIEIALILP 68
Cdd:PRK08489   18 VLTFVAFFLTTRLARFISRKlaqKNTEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFP 87
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 22-67 9.68e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 9.68e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1896070111  22 NNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALIL 67
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
24-68 1.31e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 37.03  E-value: 1.31e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1896070111  24 NREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALILP 68
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 9-67 6.13e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 35.25  E-value: 6.13e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1896070111   9 MVMFIASMIAKKNNNNREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDIEIALIL 67
Cdd:MTH00092   16 MLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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