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Conserved domains on  [gi|1896070147|gb|QNJ47229|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Systella rafflesii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 22-115 3.28e-33

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.79  E-value: 3.28e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILI 101
Cdd:MTH00161   20 ASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILL 99

                          90
                  ....*....|....
gi 1896070147 102 MGLYYEWNQGMLNW 115
Cdd:MTH00161  100 LGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 22-115 3.28e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.79  E-value: 3.28e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILI 101
Cdd:MTH00161   20 ASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILL 99

                          90
                  ....*....|....
gi 1896070147 102 MGLYYEWNQGMLNW 115
Cdd:MTH00161  100 LGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
30-114 7.51e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.48  E-value: 7.51e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKsSNLTIWTISMTIFIMILIMGLYYEWN 109
Cdd:pfam00507  11 RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWK 89


                  ....*
gi 1896070147 110 QGMLN 114
Cdd:pfam00507  90 KGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 30-115 5.09e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 5.09e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWtISMTIFIMILIMGLYYEWN 109
Cdd:COG0838    33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL-IEMLVFIAILLVGLIYAWK 111


                  ....*.
gi 1896070147 110 QGMLNW 115
Cdd:COG0838   112 KGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 22-115 3.28e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.79  E-value: 3.28e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILI 101
Cdd:MTH00161   20 ASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILL 99

                          90
                  ....*....|....
gi 1896070147 102 MGLYYEWNQGMLNW 115
Cdd:MTH00161  100 LGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 22-117 1.63e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 104.94  E-value: 1.63e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILI 101
Cdd:MTH00148   22 GLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILI 101

                          90
                  ....*....|....*.
gi 1896070147 102 MGLYYEWNQGMLNWAE 117
Cdd:MTH00148  102 LGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 22-117 1.49e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 100.07  E-value: 1.49e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILI 101
Cdd:MTH00202   22 SWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILI 101

                          90
                  ....*....|....*.
gi 1896070147 102 MGLYYEWNQGMLNWAE 117
Cdd:MTH00202  102 GGLIHEWKEGSLDWVK 117
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-117 1.92e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 91.93  E-value: 1.92e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  34 EKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILIMGLYYEWNQGML 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ....
gi 1896070147 114 NWAE 117
Cdd:MTH00106  112 EWTE 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 31-116 2.31e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 91.84  E-value: 2.31e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  31 QDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILIMGLYYEWNQ 110
Cdd:MTH00012   31 ADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWRE 110


                  ....*.
gi 1896070147 111 GMLNWA 116
Cdd:MTH00012  111 GSLDWS 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 5.71e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 90.81  E-value: 5.71e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  32 DREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILIMGLYYEWNQG 111
Cdd:MTH00042   31 DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNG 110


                  ....*.
gi 1896070147 112 MLNWAE 117
Cdd:MTH00042  111 GLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
30-114 7.51e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.48  E-value: 7.51e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKsSNLTIWTISMTIFIMILIMGLYYEWN 109
Cdd:pfam00507  11 RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWK 89


                  ....*
gi 1896070147 110 QGMLN 114
Cdd:pfam00507  90 KGALE 94
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-117 2.29e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 86.90  E-value: 2.29e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  32 DREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILIMGLYYEWNQG 111
Cdd:MTH00136   31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYEWLQG 110


                  ....*.
gi 1896070147 112 MLNWAE 117
Cdd:MTH00136  111 GLEWAE 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 30-116 2.01e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 84.53  E-value: 2.01e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWtISMTIFIMILIMGLYYEWN 109
Cdd:PRK06602   36 APDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGF-VEAMIFILVLLVGLVYLWR 114


                  ....*..
gi 1896070147 110 QGMLNWA 116
Cdd:PRK06602  115 KGALDWE 121
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 30-117 2.57e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 84.28  E-value: 2.57e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPI---IIIMKSSNLTIWTismTIFIMILIMGLYY 106
Cdd:MTH00069   27 NPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTPTNTLFWS---TLILILLTLGLIY 103

                          90
                  ....*....|.
gi 1896070147 107 EWNQGMLNWAE 117
Cdd:MTH00069  104 EWIQGGLEWAE 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 30-115 5.09e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 5.09e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWtISMTIFIMILIMGLYYEWN 109
Cdd:COG0838    33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL-IEMLVFIAILLVGLIYAWK 111


                  ....*.
gi 1896070147 110 QGMLNW 115
Cdd:COG0838   112 KGALEW 117
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 29-116 7.39e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 83.01  E-value: 7.39e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  29 LKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFIMILIMGLYYEW 108
Cdd:MTH00113   27 TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLGLIYEW 106


                  ....*...
gi 1896070147 109 NQGMLNWA 116
Cdd:MTH00113  107 LQGGLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 28-115 2.19e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 81.48  E-value: 2.19e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  28 KLKQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWtiSMTIFIMILIMGLYYE 107
Cdd:MTH00203   27 KVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLL--LAFLFLILLTLGLIYE 104


                  ....*...
gi 1896070147 108 WNQGMLNW 115
Cdd:MTH00203  105 WLQGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.65e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 69.35  E-value: 1.65e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  32 DREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNL-TIWTisMTIFIMILIMGLYYEWNQ 110
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLfGFWV--MYLFLIILTIGLIYEWVK 112


                  ....*
gi 1896070147 111 GMLNW 115
Cdd:MTH00055  113 GGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-115 1.94e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 68.93  E-value: 1.94e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  32 DREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKS-SNLTIWTisMTIFIMILIMGLYYEWNQ 110
Cdd:MTH00018   30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQiAPFGFWT--MVGFLFILTLGLIYEWIK 107


                  ....*
gi 1896070147 111 GMLNW 115
Cdd:MTH00018  108 GGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-115 5.33e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 63.03  E-value: 5.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTiFIMILIMGLYYEWN 109
Cdd:MTH00030   38 KPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWI 116


                  ....*.
gi 1896070147 110 QGMLNW 115
Cdd:MTH00030  117 KGGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
30-115 1.02e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 54.75  E-value: 1.02e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIwTISMTIFIMILIMGLYYEWN 109
Cdd:PRK07756   37 KPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA-LIEMLIFVVMLLVGLAYAWK 115


                  ....*.
gi 1896070147 110 QGMLNW 115
Cdd:PRK07756  116 KKVLQW 121
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-115 4.68e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 50.37  E-value: 4.68e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  34 EKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWtISMTIFIMILIMGLYYEWNQGML 113
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAF-IEALIFVLILIVGLVYAWRKGAL 117


                  ..
gi 1896070147 114 NW 115
Cdd:CHL00022  118 EW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
22-115 3.34e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 45.43  E-value: 3.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  22 SSTFSKKL-KQDRE--KNSPFECGFDP-KSPARMpfSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLtIWTISMTIFI 97
Cdd:PRK08489   31 ARFISRKLaQKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLGL-FGLIEMLLFI 107

                          90
                  ....*....|....*...
gi 1896070147  98 MILIMGLYYEWNQGMLNW 115
Cdd:PRK08489  108 VLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 8.68e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 41.58  E-value: 8.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  32 DREKNSPFECGFDPKSPARMP--FSMRFFLIAVMFMIFDVEIILmlpiiiimkssnLTIWTIS-----------MTIFIM 98
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVF------------LYPWAVSfdalgvfglveMALFML 101

                          90
                  ....*....|....*..
gi 1896070147  99 ILIMGLYYEWNQGMLNW 115
Cdd:PRK07928  102 TVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 30-115 1.05e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 38.72  E-value: 1.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070147  30 KQDREKNSPFECGFDPKSPARMPFSMRFFLIAVMFMIFDVEIILMLPIIIIMKSSNLTIWTISMTIFimiliMGLYYEWN 109
Cdd:MTH00092   29 KFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISFFMLMIFIF-----FGFYMEWW 103


                  ....*.
gi 1896070147 110 QGMLNW 115
Cdd:MTH00092  104 YGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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