|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.18e-150 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 435.35 E-value: 1.18e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTSSSLVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 81 FSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 161 INLFIGGLFIPLLFDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 241 LGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 321 IYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1896070197 401 YSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAKSMYFYF 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-442 |
5.65e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 330.65 E-value: 5.65e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 47 MISYFLGVDYFSFSLILLSFWICSLMLTSSSLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 127 ILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGG---LFIPLLFDFGSFYFLFYLFIILAFLVSMPMFLVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 204 LPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 284 MVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896070197 364 LGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAKSMYF 442
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-439 |
6.07e-110 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 331.71 E-value: 6.07e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWLVHS---LLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTSSS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 78 LVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 158 LFKINLFIGGLFIPLL---FDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsmePPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 235 MSVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 315 FCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1896070197 395 TLYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAKS 439
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKP 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.20e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 318.08 E-value: 1.20e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVY-FYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTSSSLV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSnSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 80 YFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 160 KINLFIGGLFIPLLFDFGSFYFLFYLFII---LAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 237 VVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 317 LSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1896070197 397 YMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAKSMYFYF 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
3.59e-101 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 309.21 E-value: 3.59e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVYFY-----SDFNMISYFLGVDYFSFSLILLSFWIC--SLML 73
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnnhwsSSWHNLSLSLATDSLSSPLIILSCWLAplSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 74 TSSSLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLP 153
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 154 LLLVLFKINLFIGGLFIPLLF------DFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 228 GYGIFRVMSVVSFLGTSF-NFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 307 HGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1896070197 387 LSFFGAVYTLYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLL 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILI 449
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
3.20e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 306.74 E-value: 3.20e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLF--RCFWWL---VHSLLF-LLSFIFMVSVYFYSDFNmiSYFLGVDYFSFSLILLSFWICSLMLT 74
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskPKFLWTnttTYSLLIaLLSLQWLKPPYYPTKNL--TQWLGIDQISAPLLVLSCWLLPLMIL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 75 SS--SLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASL 152
Cdd:MTH00124 79 ASqnHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 153 PLLLVLFKINLFIGGLFIPLLFDFGSF------YFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKL 226
Cdd:MTH00124 159 PLLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 227 GGYGIFRVMSVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIG 306
Cdd:MTH00124 239 GGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 307 HGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMF 386
Cdd:MTH00124 319 HGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1896070197 387 LSFFGAVYTLYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAK 438
Cdd:MTH00124 399 ATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
6-438 |
5.45e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 293.36 E-value: 5.45e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 6 FMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVYFYS-DFNMISYFLGVDYFSFSLILLSFWICSLMLTSSS--LVYFS 82
Cdd:MTH00068 9 LMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSeTMNFTNKYFGIDQISSPLLILTCWLLPLMILASQnhLKNEP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 83 SNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKIN 162
Cdd:MTH00068 89 INRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 163 LFIGGLFIPLLFDFGSFYF------LFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMS 236
Cdd:MTH00068 169 NSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 237 VVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFC 316
Cdd:MTH00068 249 LLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFC 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 317 LSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTL 396
Cdd:MTH00068 329 LANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTL 408
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1896070197 397 YMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAK 438
Cdd:MTH00068 409 YMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
6-435 |
6.40e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 275.23 E-value: 6.40e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 6 FMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVYFYSDFNM-ISYFLGVDYFSFSLILLSFWICSLMLTSSS--LVYFS 82
Cdd:MTH00110 9 IMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLMLMASQhhLSKEP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 83 SNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKIN 162
Cdd:MTH00110 89 LTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 163 LFIGGLFIPLL------FDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMS 236
Cdd:MTH00110 169 NNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 237 VVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFC 316
Cdd:MTH00110 249 ILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFC 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 317 LSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTL 396
Cdd:MTH00110 329 LANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSL 408
|
410 420 430
....*....|....*....|....*....|....*....
gi 1896070197 397 YMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLL 435
Cdd:MTH00110 409 YMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLL 447
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.32e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 271.43 E-value: 1.32e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWLVHSLLFLLSFIFMVSVYFYSDFNMIS--YFLGVDYFSFSLILLSFWICSLMLTSS-- 76
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASqn 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 77 SLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLL 156
Cdd:MTH00206 82 HMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 157 VLFKINLFIGGLFIPLL---FDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFR 233
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 234 VMSVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSG 313
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 314 LFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAV 393
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1896070197 394 YTLYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAK 438
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
6-438 |
3.85e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 250.26 E-value: 3.85e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 6 FMLIFMIPLSLFRCFW--WLVHSLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTSSS--LVYF 81
Cdd:MTH00127 9 LMLIPTTWLTPAKWLWttTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQnhTAPE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 82 SSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKI 161
Cdd:MTH00127 89 PINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 162 NLFIGGL------FIPLLFDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVM 235
Cdd:MTH00127 169 QNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 236 SVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLF 315
Cdd:MTH00127 249 VMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 316 CLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYT 395
Cdd:MTH00127 329 CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYS 408
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1896070197 396 LYMYSYSQHGIYFSGFYSFFMGYLREYHLLLMHWLPLNLLFAK 438
Cdd:MTH00127 409 LYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILK 451
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
3.91e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 177.20 E-value: 3.91e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 48 ISYFLGVDYFSFSLILLSFWICSL-MLTSSSLVYfssNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLL 126
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLaILASWNEIK---KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 127 ILGWGYqPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGL------FIPLLFDFGSFYFLFYLFIIlAFLVSMPMFLV 200
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaeLAAAPLPLTAQLLLFLAFFI-AFAVKVPMFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 201 HLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVmSVVSFLGTSFNFFWL--SLSLFGGVIVSFMCLCQVDLKSLIAYSS 278
Cdd:COG1008 229 HTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF-ALPLFPEASAYFAPLlaALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 279 VAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAP 358
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1896070197 359 PSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMY 399
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
23-341 |
1.57e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 167.69 E-value: 1.57e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 23 LVHSLLFLLSFIFMVSVYFYSDFNM-------------ISYFLGVDYFSFSLILLSFWICSLMLTSSSLVyfSSNYSSLF 89
Cdd:PRK05846 36 LIGTLLTLLLSLVLWIGFDSSNAGFqfvekhpwiprfgISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFY 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 90 MFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYqPERLQAGVYLIFYTLFASLPLL---LVLFKINLFIG 166
Cdd:PRK05846 114 MAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLvaiIYLVVVYYNAT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 167 GLF-IPLL----FDFGSFYFLFYLFIIlAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRvMSVVSFL 241
Cdd:PRK05846 193 GTFdIADLlnlpLPPGVQYWLFLAFFI-AFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLR-FSLPLFP 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 242 GTSFNFFWL--SLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSN 319
Cdd:PRK05846 271 DASHEFAPIiiTLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVG 350
|
330 340
....*....|....*....|..
gi 1896070197 320 IIYERLGSRSMLVNKGLINLMP 341
Cdd:PRK05846 351 VLYDRLHTRDIADYGGLAKVMP 372
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
5.65e-46 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 165.88 E-value: 5.65e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 48 ISYFLGVDYFSFSLILLSFWICSLMLTSSSLVYfsSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESI--QKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 128 LGWGyQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLF-----IPLLFDFGSFYFLFYLFIIlAFLVSMPMFLVHL 202
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFdllelLNLPLPFGVQTWLFLAFFI-AFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 203 WLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVmSVVSFLGTSFNFFWL--SLSLFGGVIVSFMCLCQVDLKSLIAYSSVA 280
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRF-NLPLFPDASLYFAPVlaALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 281 HMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPS 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 1896070197 361 LNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMY 399
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
2.56e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 155.98 E-value: 2.56e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 89 FMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGG- 167
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTt 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 168 ---LFIPLLFDFGSFYFLFYLFIiLAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRV-MSVVSFLGT 243
Cdd:MTH00217 191 dyqALCCLKIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 244 SFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070197 324 RLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
3.70e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 155.85 E-value: 3.70e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 52 LGVDYFSFSLILLSFWI--CSLMLTSSSLVYFSSNysslFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 130 WGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLLFDF-----GSFYFLFYLFIILAFLVSMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 205 PKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGT-SFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 284 MVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1896070197 364 LGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
6.84e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 154.84 E-value: 6.84e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 89 FMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGL 168
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 169 FIPLLFDFGSFYFL-FYLFI--ILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRvMSVVSFLGTSF 245
Cdd:MTH00204 194 DYQILLNIKLPLSIqKWLLVgfFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLR-FSWPLFPAASE 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 246 NF--FWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00204 273 YFapLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYE 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070197 324 RLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMY 399
Cdd:MTH00204 353 RHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
17-418 |
7.48e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 152.75 E-value: 7.48e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 17 FRCFWWLVHSLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWIcslmltsssLVYFSSNYSSLFMFIVIFL 96
Cdd:MTH00094 1 LSLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFIL---------GLVLLSEKNFNLLILSNLL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 97 VIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLLFDF 176
Cdd:MTH00094 72 ILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 177 GSFYFLfylfiILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLgtsFNFFWLSLSLFG 256
Cdd:MTH00094 152 EMFFIL-----SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 257 GVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGL 336
Cdd:MTH00094 224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSF 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 337 INLMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAVYTLYMYSYSQHGIYFSGFYSFFM 416
Cdd:MTH00094 304 FSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNV 383
|
..
gi 1896070197 417 GY 418
Cdd:MTH00094 384 GL 385
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-392 |
8.47e-42 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 149.77 E-value: 8.47e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 106 SLSLLMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLLFDFGSFY----- 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 181 -FLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLSLSLFGGVI 259
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 260 VSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLS-NIIYERLGSRSMLVNKGLIN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1896070197 339 LMPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSflmSFVLMFLSFFGA 392
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAAS---WIFLVLAGVVGS 291
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-341 |
2.20e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 125.53 E-value: 2.20e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 48 ISYFLGVDYFSFSLILLSFWICSLMLTSSSLVyfsSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 128 LGWGYQpERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPL----LFDF-GSFYFLFYLFIILAFLVSMPMFLVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 203 WLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMsvVSFLGTSFNFFWLSLSLFGGVIVSFMCLC---QVDLKSLIAYSSV 279
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFN--VQMLPDAHVYFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSV 284
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896070197 280 AHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMP 341
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
3.05e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 107.86 E-value: 3.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 48 ISYFLGVDYFSFSLILLSFWICSLMLTSSSLvyfSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 128 LGWGYQpERLQAGVYLIFYTLFASLpLLLVLFkinLFIGGLFIPLLFDFG---------SFYFLFYLFIILAFLVSMPMF 198
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGI-LILVSF---LGLVWLSGASSFDYEplrshtlplSTQLLLLAPILVGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 199 LVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMsvVSFLGTSFNFFWLSLSLFGGVIVSFMCLC---QVDLKSLIA 275
Cdd:PRK06473 223 PFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFG--VGLFPEAWVYLAPWLATWAVVSVLYGASCaiaQKDMKKMVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070197 276 YSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLIN 338
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-358 |
1.66e-24 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 105.94 E-value: 1.66e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 52 LGVDYFSFSLILLSFWICSLMLTSSSLVYFSSNyssLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWG 131
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPK---LFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 132 YQpERLQAGVYLIFYTLFASLPLLLVLFKINLFIGglfiPLLFDFGS---------FYFLFYLFIILAFLVSMPMFLVHL 202
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGD----TPTFDMTAlaakdfglgFQLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 203 WLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMsvVSFLGTSFNFFWLSLSLFGGVIVSFMCL---CQVDLKSLIAYSSV 279
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMN--AGMLPDAHAQFAPLLIVLGVVNIIYAALtsfAQRNLKRKIAYSSI 312
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1896070197 280 AHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAP 358
Cdd:PRK02546 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
44-325 |
4.42e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 104.26 E-value: 4.42e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 44 DFNMISYF-----LGVDYFSFSLILLSFWICSLMLTSSSLVyfsSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEG 118
Cdd:CHL00011 67 DYKWINFFdfhwrLGIDGLSIGPILLTGFITTLATLAAWPV---TRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWEL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 119 SILPTLLLILGWGYQpERLQAGVYLIFYTLFASLPLLLVLFKINLFigGLFIPLlFDFG---------SFYFLFYLFIIL 189
Cdd:CHL00011 144 ELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLY--GSNEPT-LNFEtlanqsypvALEILFYIGFLI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 190 AFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRV-MSVVSFLGTSFNFFWLSLSLFGGVIVSFMCLCQV 268
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1896070197 269 DLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERL 325
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-359 |
1.10e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.45 E-value: 1.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 52 LGVDYFSFSLILLSFWICSLMLTSSSLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 132 YqPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLL------FDFGSFYFLFyLFIILAFLVSMPMFLVHLWLP 205
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAF-ALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 206 KAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVsfLGTSFNFFW----LSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAH 281
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLL--FGADPALFLgtllLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896070197 282 MSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPnMTMWWFLLSSSNIAAPP 359
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP-LTAAAFLIGALALAGLP 384
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
2.14e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 87.46 E-value: 2.14e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 48 ISYFLGVDYFSFSLILLSFWICSLMLTSSSlvyFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIG---ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 128 LGWGYQpERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFipllFDFGSFY---------FLFYLFIILAFLVSMPMF 198
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTS----FDYDAIStqnlslntqLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 199 LVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMsvVSFLGTSFNFFWLSLSLFGGVIV---SFMCLCQVDLKSLIA 275
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1896070197 276 YSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLIN 338
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMN 363
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
26-393 |
2.87e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 83.43 E-value: 2.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 26 SLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLtsSSLVYFSSNYSSLFMFIVIFLVIMLYCSFS 105
Cdd:MTH00062 15 LLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQ--VMFYNLLSGVSRFFLFLSLIFSILCFCVNN 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 106 SLsllMFYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLLFDFGSFYFLFYL 185
Cdd:MTH00062 93 SL---LFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 186 FIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRvmsVVSFLGTSFNFFWLSLSLFGGVIVSFMCL 265
Cdd:MTH00062 170 VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYR---FCGFIFSGSFLGYLFLCCLFSVFFLITAC 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 266 CQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTM 345
Cdd:MTH00062 247 SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRV 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1896070197 346 WWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMSFVLMFLSFFGAV 393
Cdd:MTH00062 327 IVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-359 |
1.31e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 75.69 E-value: 1.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 186 FIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLS----LSLFGGVIVS 261
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 262 FMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMP 341
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
170
....*....|....*...
gi 1896070197 342 NMTMWWFLLSSSNIAAPP 359
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPP 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-359 |
6.76e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.43 E-value: 6.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 186 FIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRV-MSVVSFLGTSF-NFFWLSLSLFGGVIVSFM 263
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFpGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 264 CLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPnM 343
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP-L 377
|
170
....*....|....*..
gi 1896070197 344 TMWWFLLSSSNIA-APP 359
Cdd:PRK06458 378 TGWGLMLGALAIAgMPP 394
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-344 |
2.53e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 71.54 E-value: 2.53e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 181 FLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLSLS------- 253
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSpiliilg 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 254 LFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVN 333
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170
....*....|.
gi 1896070197 334 KGLINLMPNMT 344
Cdd:PRK12667 383 AGLGRKMPIAS 393
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
29-341 |
1.01e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.94 E-value: 1.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 29 FLLSFIFMVSVYFYSDFNMISYFLGVDYFS--FSLILLSFWICSLMLTSSSLVYF-----SSNYSSLFMFIVIFLVIMLY 101
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVGTGEKLTLFFGGFKltFTLTHLSWFFAMISLLVIFSVAFfmvseKTKNDAYFNMFALMSLAGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 102 CSFSSLSLLMFYIFFEGSILPTLLLILgWGYQPERLQAGVYLIF-----YTLFASLPLLLVLFKINLFIGGLFIPLLFDF 176
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLsaigaYAMLYAIFLIYAKTGTFDFADISQGLINDTS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 177 GSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLG-----------TSF 245
Cdd:PRK08668 192 TGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKlfsefgtyrgvPLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 246 NFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERL 325
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
330
....*....|....*.
gi 1896070197 326 GSRSMLVNKGLINLMP 341
Cdd:PRK08668 352 GTTKISEMGGLIEKMP 367
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
21-359 |
5.05e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 64.75 E-value: 5.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 21 WWLVHSLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTSSSLVYFSSNYS------------SL 88
Cdd:PRK08667 36 WLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNehmssneranllSA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 89 FMFIVIFLVIMLYCSFSSLSLLmfyIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGL 168
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFL---FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 169 FIPLLFDFGSFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFF 248
Cdd:PRK08667 193 ELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 249 WLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFG--SLCLM---------IGHGLCSSGLFCL 317
Cdd:PRK08667 273 ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldTLALLalggalfhsLNHALFKSLLFLT 352
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1896070197 318 SNIIYERLGSRSMLVNKGLINLMPnMTMWWFLLSSSNIAAPP 359
Cdd:PRK08667 353 AGSVVHATGTRNIEKMGGLVKLMP-YTSALFLVGAVSIAALP 393
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
178-327 |
4.43e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.31 E-value: 4.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 178 SFYFLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVV--SFLGTSFNFFWLSLSLF 255
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896070197 256 GGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGS 327
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
5.94e-10 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 56.38 E-value: 5.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 1 MLSFLFMLIFMIPLSLFRCFWWL-----VHSLLFLLSFIFMVSVYFYSDFNMISYFLGVDYFSFSLILLSFWICSLMLTS 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1896070197 76 S--SLVYFSSNYSSLFMFIVIFLVIMLYCS 103
Cdd:pfam01059 81 SqkHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
2.35e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.36 E-value: 2.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 185 LFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVV-----SFLGTSFNFFWLSLSLFGGVI 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 260 VSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1896070197 340 MPNMTMWWFLLSSSNIAAPPSLNLLGELGLLNSIISWSFLMS-FVLMFLSFFGAVYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGlVVLLVGSGLSVIYV 429
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
197-359 |
3.78e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 55.66 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 197 MFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVmsVVSFLGTS---FNFFWLSLSLFGGVIVSFMCLCQVDLKSL 273
Cdd:PRK06521 226 LVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAPgwwWGVLVLALGAISAVLGVLYALAEHDLKRL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 274 IAYSSVAH-----MSMVIGGLMSMNWWGCFGSLCLM------IGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPn 342
Cdd:PRK06521 304 LAYSTIENigiifVGLGLAMVFIAYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP- 382
|
170
....*....|....*..
gi 1896070197 343 MTMWWFLLSSSNIAAPP 359
Cdd:PRK06521 383 WTAWAFLIGCLAISALP 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-359 |
1.14e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.95 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 109 LLMFYIFFEGSILPTLLLILGWGYQPERLQAGvylIFYTLFASLPLLLVLFKI--------NLFIGGLFIPLLFDFGSFY 180
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAG---IKYMFVGSLASSMVLLGIallygqygTLNMAYLAVKMSENPTVVA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 181 FLFYLFIILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLagVLLKLGG-YGIFRVmsVVSFLGTSFNFFWLS-------- 251
Cdd:PRK08376 220 KIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINLATVGwviiilgc 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 252 LSLFGGVIvsfMCLCQVDLKSLIAYSSVAHMSMVIGGL------MSMNWWGCFGSLCL------MIGHGLCSSGLFCLSN 319
Cdd:PRK08376 296 LTMFVGVA---MAVVQKDVKRLLAYHSVSQIGYMLLGLgvglaaLGDPAMASYGEIALaggiyhIVNHALYKALLFLTAG 372
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1896070197 320 IIYERLGSRSMLVNKGLINLMPnMTMWWFLLSSSNIAAPP 359
Cdd:PRK08376 373 AVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLP 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-353 |
1.59e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.42 E-value: 1.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 187 IILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLSLSLFGgvivSFMCLC 266
Cdd:PRK07234 190 IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 267 QVDLKSLIAYSSVAHMSMVIGGLMsmnwWGCFgslcLMIGHGLCSSGLFCLSNIIYERLgsrsmlvNKGLINLMPNMTMW 346
Cdd:PRK07234 266 EKDLKRMLAFSTISQLGFILAAPL----VGGL----YALAHGLVKSTLFLCAGALPSRN-------FTELISQMLGIGKW 330
|
....*..
gi 1896070197 347 WFLLSSS 353
Cdd:PRK07234 331 IPLTMAS 337
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-349 |
1.54e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 50.35 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 70 SLMLTSSSLVYFS-SNYS--------------SLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEgsILPT---LLLILGwg 131
Cdd:PRK12665 79 ALMLVVSSVVLLAvLVYAigqgirdgdeeqpvSIFLPTYLILVAGVSNAFLAGDLFNLYVGFE--ILLVasyVLLTLG-- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 132 YQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLL------FDFGSFYFLFYLFIIlAFLVSMPMFLVHLWLP 205
Cdd:PRK12665 155 ATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVLLV-AFGIKAAVFPLSFWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 206 KAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVsFLGTSFNFFWLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMSMV 285
Cdd:PRK12665 234 DSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYM 312
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896070197 286 IGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFL 349
Cdd:PRK12665 313 VFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFV 376
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-343 |
3.40e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 49.37 E-value: 3.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 80 YFSSNYSSL---FMFIVIFLVIMLYCSFSSLSLLMfYIFFEGSILPTLLLILGWGYQPERLQAGVYLIFYTLFASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNLprfYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 157 VLFKINLFIGGLFIPLLF-------DFGSFYFLFYLFIILAFLVSmPMFLVHLWLPKAhVEAPVSGSMVL-AGVLLKLGG 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEILgqadhikNHGLFIPMIFMFLLGAFTKS-AQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 229 YGIFR---VMSVVSFLGTSFNFFWLSLSLFGgvivSFMCLCQVDLKSLIAYSSVAH----MSMV-IGGLMSMNWWG---- 296
Cdd:PRK12646 258 FLLFRftpLLGLSNMYIYIVTFVGLITMLFG----SITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDaias 333
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1896070197 297 -----CFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNM 343
Cdd:PRK12646 334 iyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKM 385
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-341 |
8.98e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 47.84 E-value: 8.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 187 IILAFLVSMPMFLVHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWL--SLSLFGGVIVSFMC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896070197 265 LCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMP 341
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP 368
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
1.71e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 43.65 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 59 FSLILLSFWICSLMLTSSSLVYFSSNYSSLFMFIVIFLVIMLYCSFSSLSLLMFYIFFEGSILPTLLLIlGWGYQPERLQ 138
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 139 AGVYLIFYTLFASLPLLL--VLFKINLFIGGLFI-PLLFDFGSFYFLFYLFIILafLVSMPMFLVHLWLPKAHVEAPVSG 215
Cdd:PRK06589 167 GGYKYLKILMISALLLFLpaVILIYTKTGNLDFVsGGLFSKNQSIILLLMFIYG--IAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 216 SMVLAGVLLKLGGYGIFRVMSVVSFLGTSFNFFWLSLSLFGGVIV-----SFMCLCQVDLKSLIAYSSVAHMSMVIGGLM 290
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 291 SMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPP-----SLNLLG 365
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIfsgfiSKFLIL 404
|
330 340 350
....*....|....*....|....*....|.
gi 1896070197 366 ELGLLNSIISWSFLMSFVLMFLSFFGAVYTL 396
Cdd:PRK06589 405 LAASEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| Herpes_LMP1 |
pfam05297 |
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ... |
61-192 |
4.25e-04 |
|
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys
Pssm-ID: 283060 Cd Length: 386 Bit Score: 42.32 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 61 LILLSFWICSLM--LTSSSLVYFssnYSSLFMFIVIFLVIMLY-----CSFSSLSLLMFYIffegsilpTLLLILGWGYQ 133
Cdd:pfam05297 33 LLALLFWLYIVMsdWTGGALLVL---YSFALILIIIILIIFIFrrdllCPLGALCILLLMI--------TLLLIALWNLH 101
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1896070197 134 PERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFIPLLFDFGSFYFLFYLFIILAFL 192
Cdd:pfam05297 102 GQALFLGIVLFIFGCLLVLGIWIYLLEILWRLGATIWQLLAFFLAFFLDLILLIIALYL 160
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-359 |
8.26e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 41.95 E-value: 8.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 188 ILAFLVSMPMFL------VHLWLPKAHVEA-PVS-----GSMVLAGVLLKLGGYGIFRVMSVvsflgtsFNFFWLSLSLF 255
Cdd:PRK12650 209 VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 256 GGVIVSFMCLCQVDLKSLIAYSSVAHMSMVIGGLMSMNWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKG 335
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180
....*....|....*....|....
gi 1896070197 336 LINLMPnMTMWWFLLSSSNIAAPP 359
Cdd:PRK12650 362 LWRRMP-FTFVSVTIAALSMAAVP 384
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-341 |
9.94e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 9.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 200 VHLWLPKAHVEAPVSGSMVLAGVLLKLGGYGIFrvmsVVSFLGTSFNFFWLSLSLFGGVIVSFM----CLCQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896070197 276 YSSVAHMSMVIGGL------MSMNW-----WGCFGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSMLVNKGLINLMP 341
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMP 351
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
91-359 |
7.46e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 38.42 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 91 FIVIFLVIMLYCSFSSlSLLMFYIFFEGSILPTLLLIlGWGYQPERLQAGVYLIFYTLFASLPLLLVLFKINLFIGGLFI 170
Cdd:PRK06525 118 FLLLFIGAMAGLVYSS-TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFAL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 171 PLLFDF-GSFYFLFYLFIILAFLVSMPMFLVHLWLPKAhVEAPVSGSMVL-AGVLLKLGGYGIFRVMSVVSFLGTSFNFF 248
Cdd:PRK06525 196 SALSGLhGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070197 249 WLSLSLFGGVIVSFMCLCQVDLKSLIAYSSVAHMS-MVIGGLMSM--NWWGCFGSLCLMIGHGLCSSGLFCLSNIIYERL 325
Cdd:PRK06525 275 GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGyMFFGLSLAIlgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSC 354
|
250 260 270
....*....|....*....|....*....|....
gi 1896070197 326 GSRSMLVNKGLINLMPNMTMWWFLLSSSNIAAPP 359
Cdd:PRK06525 355 GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| |
