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Conserved domains on  [gi|1896070287|gb|QNJ47299|]
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NADH dehydrogenase subunit 4L, partial (mitochondrion) [Monistria consobrina]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 2.73e-23

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 84.82  E-value: 2.73e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  3 MFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1896070287 83 SHGSDFFNS 91
Cdd:MTH00162  81 SHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 2.73e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 84.82  E-value: 2.73e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  3 MFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1896070287 83 SHGSDFFNS 91
Cdd:MTH00162  81 SHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 6.77e-09

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 48.33  E-value: 6.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  4 FSLLVSLLIYCSGIYVFSSsRKHLLVVLLSLEYIVLSLFMFIII--YLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLfgRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 1896070287 82 RSHGSDFFNSFSL 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 2.73e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 84.82  E-value: 2.73e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  3 MFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1896070287 83 SHGSDFFNS 91
Cdd:MTH00162  81 SHGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-97 4.66e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 59.22  E-value: 4.66e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  1 MFMFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00188   1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                         90
                 ....*....|....*..
gi 1896070287 81 IRSHGSDFFNSFSLSLC 97
Cdd:MTH00188  81 IRSHGSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-97 1.52e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 57.93  E-value: 1.52e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  1 MFMFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00149   1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                         90
                 ....*....|....*..
gi 1896070287 81 IRSHGSDFFNSFSLSLC 97
Cdd:MTH00149  81 IRLHGNDYVSSLSSLKF 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 4-97 9.51e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 56.01  E-value: 9.51e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  4 FSLLVSLLIYCSGiyvFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFF--PVIFLVFSVCEGALGLSILVSMI 81
Cdd:MTH00125   6 FSLYTAFMLSLLG---LSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTpmPIILLTFSACEAGTGLALLVATT 82

                         90
                 ....*....|....*.
gi 1896070287 82 RSHGSDFFNSFSLSLC 97
Cdd:MTH00125  83 RTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 1.43e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 50.35  E-value: 1.43e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070287 24 RKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYF--FPVIFLVFSVCEGALGLSILVSMIRSHGSDFFNSFSLSLC 97
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFsaAPMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 6.77e-09

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 48.33  E-value: 6.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  4 FSLLVSLLIYCSGIYVFSSsRKHLLVVLLSLEYIVLSLFMFIII--YLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLfgRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 1896070287 82 RSHGSDFFNSFSL 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 2-97 7.53e-09

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 48.59  E-value: 7.53e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  2 FMFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFN-YDYFFPVIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANqVNGMLAIVLLTFGACEASLGLSLLVLM 80

                         90
                 ....*....|....*..
gi 1896070287 81 IRSHGSDFFNSFSLSLC 97
Cdd:MTH00013  81 TRSYGNDMLKSLTSNKC 97
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 24-97 3.92e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 46.52  E-value: 3.92e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070287 24 RKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYFF--PVIFLVFSVCEGALGLSILVSMIRSHGSDFFNSFSLSLC 97
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFslPMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 24-97 8.03e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 45.69  E-value: 8.03e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070287 24 RKHLLVVLLSLEYIVLSLFMF--IIIYLFSFNYDYFFPVIFLVFSVCEGALGLSILVSMIRSHGSDFFNSFSLSLC 97
Cdd:MTH00107  23 RSHLMSSLLCLEGMMLSLFIMatLTILNTHFTLASMMPIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 1-95 3.99e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 41.47  E-value: 3.99e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  1 MFMFSLLVSLLIYCSGIYvfsssRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNY--DYFFPVIFLVFSVCEGALGLSILV 78
Cdd:MTH00181   2 MFVFISAFILLLLGLSLY-----KTHLLSLLLCLEGMMLFLFLLLALFSLLSSSssMLMFGLILLTFSACEAVLGLSLLV 76

                         90
                 ....*....|....*..
gi 1896070287 79 SMIRSHGSDFFNSFSLS 95
Cdd:MTH00181  77 ATNRTHGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 3-94 8.14e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 37.98  E-value: 8.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070287  3 MFSLLVSLLIYCSGIYVFSSSRKHLLVVLLSLEYIVLSLFMFIIIYLFSFNYDYF--FPVIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00043   2 NIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLL 81

                         90
                 ....*....|....
gi 1896070287 81 IRSHGSDFFNSFSL 94
Cdd:MTH00043  82 SRNHNSDLVASLNL 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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